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Reviews on structure and function of fungal, plant and bacterial haem peroxidases

  1. Andersson, L.A. and Dawson, L.A. (1991) EXAFS spectroscopy of heme­containing oxygenases and peroxidases. Structure and Bonding 64, 1-40.
  2. Banci, L. (1997) Structural properties of peroxidases. J. Biotechnol. 53, 253-263.
  3. Broda, P., Birch, P., Brooks, P., Copa­Patino, J.L., Sinnott, M.L., Tempelaars, C., Wang, Q., Wyatt, A. and Sims, P. (1994) Phanerochaete chrysosporium and its natural substrate. FEMS Microbiol. Rev. 13, 189-195.
  4. Cai, D, and Tien, M. (1993) Lignin­degrading peroxidases of Phanerochaete chrysosporium. J. Biotechnol. 30, 79-90.
  5. Chignell, C.F. (1986) Structure­activity relationships in the free­radical metabolism of xenobiotics. Environ. Health Perspect. 61, 133-137.
  6. Dawson, J.H. (1988) Probing structure­function relations in heme­containing oxygenases and peroxidases. Science 240, 433-439.
  7. Dunford, H.B. (1982) Peroxidases. In Eichhorn, G.L. and Marzilli, L.G., Eds. Advances in Inorganic Biochemistry, vol. 4. Elsevier, New York, pp. 41-68.
  8. Gold, M.H. and Alic, M. (1993) Molecular biology of the lignin­degrading basidiomycete Phanerochaete chrysosporium. Microbiol. Rev. 57, 605-622.
  9. Goodin, D.B. (1996) When an amide is more like histidine than imidazole: The role of axial ligands in heme catalysis. J. Biol. Inorg. Chem. 1, 360-363.
  10. Harvey, P.J. and Candeias, L.P. (1995) Radical cation cofactors in lignin peroxidase catalysis. Biochem. Soc. Trans. 23, 262-267.
  11. Harvey, P.J., Floris, R., Lundell, T., Palmer, J.M., Schoemaker, H.E. and Wever, R. (1992) Catalytic mechanisms and regulation of lignin peroxidase. Biochem. Soc. Trans. 20, 345-349.
  12. Hollenberg, P.F. (1992) Mechanisms of cytochrome P450 and peroxidase­catalyzed xenobiotic metabolism. FASEB J. 6, 686-694.
  13. Levit, M.N. and Shkrob, A.M. (1992) Lignin and ligninase. Bioorg. Khim. (Moscow) 18, 309-345.
  14. Li, H. and Poulos, T.L. (1994) Structural variation in heme enzymes: a comparative analysis of peroxidase and P450 crystal structures. Structure 2, 461-464.
  15. Loew, G.H., Du, P. and Smith, A.T. (1995) Homology modelling of horseradish peroxidase coupled to two­dimensional NMR spectral assignments. Biochem. Soc. Trans. 23, 250-256.
  16. McLendon, G. (1991) Control of biological electron transport via molecular recognition and binding: The "velcro" model. Structure and Bonding 75, 159-174.
  17. Meunier, B. (1994) Ligninase and related model systems. In Sheldon, R.A., Ed. Metalloporphyrins in Catalytic Oxidations, Marcel Dekker, Inc., New York, pp. 133-155.
  18. Millett, F., Miller, M.A., Geren, L. and Durham, B. (1995) Electron transfer between cytochrome c and cytochrome c peroxidase. J. Bioenerg. Biomembr. 27, 341-351.
  19. Nocek, J.M., Zhou, J.S., De Forest, S., Priyadarshy, S., Beratan, D.N., Onuchic, J.N. and Hoffman, B.M. (1996) Theory and practice of electron transfer within protein-protein complexes: Application to the multidomain binding of cytochrome c by cytochrome c peroxidase. Chem. Rev. 96, 2459-2489.
  20. Ortiz de Montellano, P.R. (1992) Catalytic sites of hemoprotein peroxidases. Annu. Rev. Pharmacol. Toxicol. 32, 89-107.
  21. Ortiz de Montellano, P.R., Ozaki, S.I., Newmyer, S.L., Miller, V.P. and Harmann, C. (1995) Structural determinants of the catalytic activities of peroxidases. Biochem. Soc. Trans. 23, 223-227.
  22. Pedersen, J.Z. and Finazzi­Agro, A. (1993) Protein­radical enzymes. FEBS Lett. 325, 53-58.
  23. Poulos, T.L. (1988) Heme enzyme crystal structures. In Eichhorn, G.L. and Marzilli, L.G., Eds. Advances in Inorganic Biochemistry, vol. 7: Heme Proteins. Elsevier, New York, pp. 1-36.
  24. Poulos, T.L. (1993) Peroxidases. Curr. Opin. Biotechnol. 4, 484-489.
  25. Prince, R.C. and George, G.N. (1990) Tryptophan radicals. Trends Biochem. Sci. 15, 170-172.
  26. Reddy, C.A. (1993) An overview of the recent advances on the physiology and molecular biology of lignin peroxidases of Phanerochaete chrysosporium. J. Biotechnol. 30, 91-107.
  27. Reddy, C.A. (1995) The potential for white­rot fungi in the treatment of pollutants. Curr. Opin. Biotechnol. 6, 320-328.
  28. Reddy, C.A. and D'Souza, T.M. (1994) Physiology and molecular biology of the lignin peroxidases of Phanerochaete chrysosporium. FEMS Microbiol. Rev. 13, 137-152.
  29. Rietjens, I.M.C.M., Osman, A.M., Veeger, C., Zakharieva, O., Antony, J., Grodzicki, M. and Trautwein, A.X. (1996) On the role of the axial ligand in heme­based catalysis of the peroxidase and P450 type. J. Biol. Inorg. Chem. 1, 372-376.
  30. Sampson, J.B., Rosen, H. and Beckman, J.S. (1996) Peroxynitrite­dependent tyrosine nitration catalyzed by superoxide dismutase, myeloperoxidase, and horseradish peroxidase. Methods Enzymol. 269, 210-218.
  31. Scheeline, A., Olson, D.L., Williksen, E.P., Horras, G.A., Klein, M.L. and Larter, R. (1997) The peroxidase­oxidase oscillator and its constituent chemistries. Chem. Rev. 97, 739-756.
  32. Smith, A.T. and Veitch, N.C. (1998) Substrate binding and catalysis in heme peroxidases. Curr. Opin. Chem. Biol. 2, 269-278.
  33. Smulevich, G. (1995) The functional role of the key residues in the active site of peroxidases. Biochem. Soc. Trans. 23, 240-244.
  34. Spiro, T.G. (1985) Resonance Raman spectroscopy as a probe of heme protein structure and dynamics. Adv. Protein Chem. 37, 111-159.
  35. Tien, M. (1987) Properties of ligninase from Phanerochaete chrysosporium and their possible applications. Crit. Rev. Microbiol. 15, 141-168.
  36. van Huystee, R.B. (1987) Some molecular aspects of plant peroxidase biosynthetic studies. Annu. Rev. Plant Physiol. 38, 205-219.
  37. Veitch, N.C. (1995) Aromatic donor molecule binding sites of haem peroxidases. Biochem. Soc. Trans. 23, 232-240.
  38. Vianello, A. and Macri, F. (1991) Generation of superoxide anion and hydrogen peroxide at the surface of plant cells. J. Bioenerg. Biomembr. 23, 409-423.
  39. Weiss, R., Mandon, D., Wolter, T., Trautwein, A.X., Müther, M., Bill, E., Gold, A., Jayaraj, K. and Terner, J. (1996) Delocalization over the heme and the axial ligands of one of the two oxidizing equivalents stored above the ferric state in the peroxidase and catalase Compound­I intermediates: Indirect participation of the proximal axial ligand of iron in the oxidation reactions catalyzed by heme­based peroxidases and catalases? J. Biol. Inorg. Chem. 1, 377-383.
  40. Welinder, K.G. (1985) Plant peroxidases. Their primary, secondary and tertiary structures, and relation to cytochrome c peroxidase. Eur. J. Biochem. 151, 497-504.
  41. Welinder, K.G., Mauro, J.M. and Norskov­Lauritsen, L. (1992) Structure of plant and fungal peroxidases. Biochem. Soc. Trans. 20, 337-340.
  42. Welinder, K.G., Bjornholm, B. and Dunford, H.B. (1995) Functions of electrostatic potentials and conserved distal and proximal His-Asp H­bonding networks in haem peroxidases. Biochem. Soc. Trans. 23, 257-262.
  43. Whetten, R.W., MacKay, J.J. and Sederoff, R.R. (1998) Recent advances in understanding lignin biosynthesis. Annu. Rev. Plant Physiol. Plant Mol. Biol. 49, 585-609.
  44. Wood, P.M. (1992) A comparison of peroxidase and cytochrome P­450. Biochem. Soc. Trans. 20, 349-352.
  45. Yamazaki, I. and Yokota, K. (1973) Oxidation states of peroxidase. Mol. Cell Biochem. 15, 39-52.
  46. Yonetani, T. (1970) Cytochrome c peroxidase. Adv. Enzymol. Relat. Areas Mol. Biol. 33, 309-335.

Books

  1. Everse, J., Everse, K.E. and Grisham, M.B., Eds. (1991) Peroxidases in Chemistry and Biology, vol. I. CRC Press, Boca Raton.
  2. Everse, J., Everse, K.E. and Grisham, M.B., Eds. (1991) Peroxidases in Chemistry and Biology, vol. II. CRC Press, Boca Raton.
  3. Gaspar, Th., Penel, C., Thorpe, T. and Greppin, H., Eds. (1982) Peroxidases 1970-1980. A Survey of their Biochimical Roles in Higher Plants. University of Geneva, Switzerland.
  4. Penel, C., Gaspar, Th. and Greppin, H., Eds. (1992) Plant Peroxidases 1980-1990. Topics and Detailed Literature on Molecular, Biochimical, and Physiollogical Aspects. University of Geneva, Switzerland.
  5. Proceedings of the International Symposia on Plant Peroxidases:
    1. Greppin, H., Penel, C. and Gaspar, Th., Eds. (1986) Molecular and Physiological Aspects of Plant Peroxidases (Geneva, 1985). University of Geneva, Switzerland.
    2. Penel, C., Greppin, H., Gaspar, Th. and Lobarzewski. J., Eds. (1991) Biochemical, Molecular, and Physiological Aspects of Plant Peroxidases (Lublin, 1990). University M. Curie­Sklodowska, Lubin, Poland and University of Geneva, Switzerland.
    3. Welinder, K.G., Rasmussen, S.K., Penel, C. and Greppin, H., Eds. (1993) Plant Peroxidases: Biochemistry and Physiology (Elsinore, 1993). University of Coppenhagen, Denmark and University of Geneva, Switzerland.
    4. Obinger, C., Burner, U., Ebermann, R., Penel, C. and Greppin, H., Eds. (1996) Plant Peroxidases: Biochemistry and Physiology (Vienna, 1996). University of Agriculture, Austria and University of Geneva, Switzerland.
Bibliography on structural studies of fungal, plant and bacterial haem peroxidases