Recent PDB releases or updates: week of 13 June 2008

• 1k9t.pdb. hydrolase 30-oct-01 1k9t
  Title: chitinase a complexed with tetra-n-acetylchitotriose
  Author: g. prag, p. a. tucker, a. b. oppenheim
  Keywords: chitinase, chitinolysis, a/b- (tim)-barrel
  
• 1q32.pdb. replication,transcription,hydrolase 28-jul-03 1q32
  Title: crystal structure analysis of the yeast tyrosyl-dna phosphodiesterase
  Author: x. he, k. babaoglu, a. price, k. c. nitiss, j. l. nitiss, s. w. white
  Keywords: replication, transcription, hydrolase
  
• 1vgo.pdb. proton transport 28-apr-04 1vgo
  Title: crystal structure of archaerhodopsin-2
  Author: k. yoshimura, n. enami, m. murakami, h. okumura, k. ihara, t. kouyama
  Keywords: proton transport
  
• 2cu9.pdb. chaperone 25-may-05 2cu9
  Title: crystal structure of histone chaperone cia1
  Author: b. padmanabhan, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, chaperone
  
• 2gmk.pdb. hydrolase 06-apr-06 2gmk
  Title: crystal structure of onconase double mutant with spontaneously-assembled (amp) 4 stack
  Author: e. bae, j. e. lee, r. t. raines, g. e. wesenberg, g. n. phillips jr. , e. bitto, c. a. bingman, center for eukaryotic structural genomics (cesg)
  Keywords: p-30 protein, ribonuclease, anti-tumor, protein structure initiative, psi, center for eukaryotic structural genomics, cesg, hydrolase
  
• 2hep.pdb. structural genomics, unknown function 21-jun-06 2hep He Hg (NMR, 20 structures)
  Title: solution nmr structure of the upf0291 protein ynzc from bacillus subtilis. northeast structural genomics target sr384.
  Author: j. m. aramini, g. v. t. swapna, c. k. ho, k. shetty, k. cunningham, l. - c. ma, r. xiao, j. liu, m. baran, t. b. acton, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
  Keywords: nmr structure, autostructure, northeast structural genomics consortium, psi-1, protein structure initiative, nesg, structural genomics, unknown function
  
• 2hkp.pdb. hydrolase 05-jul-06 2hkp
  Title: sumo protease ulp1 with the catalytic cysteine oxidized to a sulfenic acid
  Author: z. xu, t. b. ng, s. w. n. au
  
  
• 2hl8.pdb. hydrolase 06-jul-06 2hl8
  Title: sumo protease ulp1 with the catalytic cysteine oxidized to a sulfinic acid
  Author: z. xu, t. b. ng, s. w. n. au
  
  
• 2hl9.pdb. hydrolase 06-jul-06 2hl9
  Title: sumo protease ulp1 with the catalytic cysteine oxidized to a sulfonic acid
  Author: z. xu, t. b. ng, s. w. n. au
  
  
• 2i5s.pdb. hydrolase/dna 25-aug-06 2i5s
  Title: crystal structure of onconase with bound nucleic acid
  Author: e. bae, j. e. lee, r. t. raines, g. e. wesenberg, g. n. phillips jr. , e. bitto, c. a. bingman, center for eukaryotic structural genomics (cesg)
  Keywords: p-30 protein, ribonuclease, anti-tumor, structural genomics, psi-2, protein structure initiative, center for eukaryotic structural genomics, cesg, hydrolase/dna complex
  
• 2ibn.pdb. oxidoreductase 11-sep-06 2ibn Fe Se
  Title: crystal structure of human myo-inositol oxygenase (miox)
  Author: b. m. hallberg, r. d. busam, c. arrowsmith, h. berglund, r. collins, a. edwards, m. ehn, s. flodin, a. flores, s. graslund, m. hammarstrom, m. hogbom, l. holmberg-schiavone, i. johansson, t. karlberg, t. kotenyova, p. nilsson-ehle, p. nordlund, t. nyman, d. ogg, j. sagemark, p. stenmark, m. sundstrom, j. uppenberg, s. van den berg, j. weigelt, a. g. thorsell, c. persson, structural genomics consortium (sgc)
  Keywords: inositol, diiron, structural genomics, structural genomics consortium, sgc, oxidoreductase
  
• 2jqe.pdb. signaling protein 31-may-07 2jqe Hg (NMR, 10 structures)
  Title: soution structure of af54 m-domain
  Author: u. ilangovan, a. p. hinck
  Keywords: srp54, nmr structure, solution, signaling protein
  
• 2jqm.pdb. transferase 03-jun-07 2jqm He Hg (NMR, 19 structures)
  Title: yellow fever envelope protein domain iii nmr structure (s288-k398)
  Author: d. e. volk, s. a. gandham, f. j. may, a. anderson, a. dt. barrett, d. g. gorenstein
  Keywords: asibi strain, nmr structure, transferase
  
• 2jqr.pdb. electron transport 07-jun-07 2jqr He Hg Fe (NMR, 10 structures)
  Title: solution model of crosslinked complex of cytochrome c and adrenodoxin
  Author: x. xu, w. reinle, f. hannemann, p. v. konarev, d. i. svergun, r. bernhardt, m. ubbink
  Keywords: cytochrome c, adrenodoxin, crosslinked complex, 2fe2s ferredoxin, pseudocontact shift, paramagnetic relaxation enhancement, encounter complex
  
• 2jvg.pdb. immune system 20-sep-07 2jvg He Hg (NMR, 20 structures)
  Title: structure of c3-binding domain 4 of staphylococcus aureus protein sbi
  Author: a. upadhyay, j. burman, e. a. clark, j. m. h. van den elsen, s. bagby
  Keywords: immune system
  
• 2jvh.pdb. immune system 20-sep-07 2jvh He Hg (NMR, minimized average structure)
  Title: structure of c3-binding domain 4 of s. aureus protein sbi
  Author: a. upadhyay, j. burman, e. a. clark, j. m. h. van den elsen, s. bagby
  Keywords: immune system
  
• 2jxy.pdb. hydrolase 01-dec-07 2jxy He Hg Ca (NMR, 20 structures)
  Title: solution structure of the hemopexin-like domain of mmp12
  Author: i. bertini, v. calderone, m. fragai, r. jaiswal, c. luchinat, m. melikian
  Keywords: calcium, extracellular matrix, glycoprotein, hydrolase, metal-binding, metalloprotease, polymorphism, protease, secreted, zinc, zymogen
  
• 2k0e.pdb. metal binding protein 02-feb-08 2k0e He Hg Ca (NMR, 160 structures)
  Title: a coupled equilibrium shift mechanism in calmodulin- mediated signal transduction
  Author: j. gsponer, j. christodoulou, a. cavalli, j. m. bui, b. richter, c. m. dobson, m. vendruscolo
  Keywords: binding, ensemble, helix bundle, calcium binding, metal binding protein
  
• 2k0f.pdb. metal binding protein 02-feb-08 2k0f He Hg Ca (NMR, 160 structures)
  Title: calmodulin complexed with calmodulin-binding peptide from smooth muscle myosin light chain kinase
  Author: j. gsponer, j. christodoulou, a. cavalli, j. m. bui, b. richter, c. m. dobson, m. vendruscolo
  Keywords: binding, ensemble, helix bundle, calcium binding, metal binding protein
  
• 2k1z.pdb. signaling protein 18-mar-08 2k1z He Hg (NMR, 20 structures)
  Title: solution structure of par-3 pdz3
  Author: w. feng, h. wu, l. chan, m. zhang
  Keywords: pdz domain, scaffold protein, cell polarity, alternative splicing, cell cycle, cell division, cell junction, coiled coil, membrane, phosphoprotein, tight junction, signaling protein
  
• 2k20.pdb. signaling protein 18-mar-08 2k20 He Hg (NMR, 20 structures)
  Title: solution structure of par-3 pdz3 in complex with pten peptide
  Author: w. feng, h. wu, l. chan, m. zhang
  Keywords: pten, pdz domain, scaffold protein, cell polarity, alternative splicing, cell cycle, cell division, cell junction, coiled coil, membrane, phosphoprotein, tight junction, signaling protein
  
• 2k2o.pdb. membrane protein 07-apr-08 2k2o He Hg (NMR, 20 structures)
  Title: solution structure of the inner dysf domain of human myoferlin
  Author: p. patel, r. harris, n. keep, p. driscoll
  Keywords: muscular dystrophy, dysf, dysferlin, limb-girdle, alternative splicing, membrane, nucleus, phosphoprotein, polymorphism, transmembrane, membrane protein
  
• 2nvb.pdb. oxidoreductase 12-nov-06 2nvb Zn
  Title: contribution of pro275 to the thermostability of the alcohol dehydrogenases (adhs)
  Author: e. goihberg, s. tel-or, m. peretz, f. frolow, o. dym, y. burstein, israel structural proteomics center (ispc)
  Keywords: structural genomics, israel structural proteomics center, ispc, oxidoreductase
  
• 2o98.pdb. protein binding 13-dec-06 2o98
  Title: structure of the 14-3-3 / h+-atpase plant complex
  Author: c. ottmann, m. weyand, a. wittinghofer, c. oecking
  Keywords: atpase, 14-3-3, plasma membrane, electrochemical proton gradient, cell turgor, regulation, protein binding
  
• 2oxo.pdb. dna binding protein 20-feb-07 2oxo
  Title: crystallization and structure determination of the core- binding domain of bacteriophage lambda integrase
  Author: h. b. kamadurai, r. jain, m. p. foster
  Keywords: four-helix bundle, dna binding protein
  
• 2p2r.pdb. rna and dna binding protein/dna 07-mar-07 2p2r Se
  Title: crystal structure of the third kh domain of human poly(c)- binding protein-2 in complex with c-rich strand of human telomeric dna
  Author: t. l. james, r. m. stroud, z. du, s. fenn, r. tjhen, j. k. lee
  Keywords: rna and dna binding protein/dna complex
  
• 2p35.pdb. transferase 08-mar-07 2p35 Se
  Title: crystal structure of trans-aconitate methyltransferase from agrobacterium tumefaciens
  Author: c. chang, x. xu, h. zheng, a. savchenko, a. m. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: sam dependent methyltransferase, agrobacterium tumefaciens, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2piy.pdb. hydrolase 15-apr-07 2piy Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b (s)-2-(3-aminomethyl-phenyl)-3-{hydroxy- [(r)-2-methyl-1-(3-phenyl-propane-1-sulfonylamino)-propyl]- phosphinoyl}-propionic acid {zk 528} complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2piz.pdb. hydrolase 15-apr-07 2piz Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b 2-(3-guanidino-phenyl)-3-[hydroxy-(3- phenyl-propyl)-phosphinoyl]-propionic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitors, hydrolase
  
• 2pj0.pdb. hydrolase 15-apr-07 2pj0 Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b [((r)-1-benzyloxycarbonylamino-2-methyl- propyl)-hydroxy-phosphinoyloxy]-(3-guanidino-phenyl)- acetic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pj1.pdb. hydrolase 15-apr-07 2pj1 Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b (3-aminomethyl-phenyl)-[((r)-1- benzyloxycarbonylamino-2-methyl-propyl)-hydroxy- phosphinoyloxy]-acetic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pj2.pdb. hydrolase 15-apr-07 2pj2 Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b 2-(3-aminomethyl-phenyl)-3-[((r)-1- benzyloxycarbonylamino-2-methyl-propyl)-hydroxy- phosphinoyl]-propionic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pj3.pdb. hydrolase 15-apr-07 2pj3 Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b (3-guanidino-phenyl)-{hydroxy-[(r)-2- methyl-1-(3-phenyl-propionylamino)-propyl]-phosphinoyloxy}- acetic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pj4.pdb. hydrolase 15-apr-07 2pj4 Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b [((r)-benzyloxycarbonylamino-cyclohexyl- methyl)-hydroxy-phosphinoyloxy]-(3-guanidino-phenyl)- acetic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pj5.pdb. hydrolase 15-apr-07 2pj5 Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b [((r)-1-benzyloxycarbonylamino-hexyl)- hydroxy-phosphinoyloxy]-(3-guanidino-phenyl)-acetic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pj6.pdb. hydrolase 15-apr-07 2pj6 Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b 2-(3-aminomethyl-phenyl)-3-{hydroxy- [(r)-2-methyl-1-(2-phenyl-ethanesulfonylamino)-propyl]- phosphinoyl}-propionic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pj7.pdb. hydrolase 15-apr-07 2pj7 Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b 2-(3-aminomethyl-phenyl)-3-[((r)-1- benzenesulfonylamino-2-methyl-propyl)-hydroxy-phosphinoyl]- propionic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pj8.pdb. hydrolase 15-apr-07 2pj8 Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b 2-(3-aminomethyl-phenyl)-3-{[(r)-1- (biphenyl-4-sulfonylamino)-2-methyl-propyl]-hydroxy- phosphinoyl}-propionic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pj9.pdb. hydrolase 15-apr-07 2pj9 Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b 2-(3-aminomethyl-phenyl)-3-{[(r)-1- (benzo[1,2,5]thiadiazole-4-sulfonylamino)-2-methyl-propyl]- hydroxy-phosphinoyl}-propionic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pja.pdb. hydrolase 15-apr-07 2pja Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b 3-{[(r)-1-((s)-2-benzyloxycarbonylamino- 3-phenyl-propionylamino)-2-methyl-propyl]-hydroxy- phosphinoyl}-2-(3-guanidino-phenyl)-propionic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pjb.pdb. hydrolase 15-apr-07 2pjb Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b 2-(3-aminomethyl-phenyl)-3-{[1-((s)-2- benzyloxycarbonylamino-3-phenyl-propane-1-sulfonylamino)-2- methyl-propyl]-hydroxy-phosphinoyl}-propionic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2pjc.pdb. hydrolase 15-apr-07 2pjc Zn
  Title: crystal structure of activated porcine pancreatic carboxypeptidase b ({(r)-1-[(s)-2-benzyloxycarbonylamino-3- (4-hydroxy-phenyl)-propionylamino]-2-methyl-propyl}- hydroxy-phosphinoyloxy)-(3-guanidino-phenyl)-acetic acid complex
  Author: m. adler, m. whitlow
  Keywords: exopeptidase, phosphinate based inhibitor, hydrolase
  
• 2poa.pdb. lipid binding protein 26-apr-07 2poa He Hg (NMR, 17 structures)
  Title: schistosoma mansoni sm14 fatty acid-binding protein: improvement of protein stability by substitution of the single cys62 residue
  Author: c. r. r. ramos, s. oyama jr. , m. l. sforca, t. a. pertinhez, p. l. ho, a. spisni
  Keywords: fatty acid binding protein, site directed mutagenesis, protein stability, molecular dynamics, vaccine antigen, lipid binding protein
  
• 2pz9.pdb. transcription 17-may-07 2pz9 Se
  Title: crystal structure of putative transcriptional regulator sco4942 from streptomyces coelicolor
  Author: e. filippova, m. chruszcz, x. xu, h. zheng, m. cymborowski, a. savchenko, a. edwards, w. minor, midwest center for structural genomics (mcsg)
  Keywords: transcriptional regulator, streptomyces coelicolor a3(2), psi, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2q0h.pdb. hydrolase 22-may-07 2q0h Mg
  Title: abc protein artp in complex with adp/mg2+, atp-gamma-s hydrolyzed
  Author: p. f. thaben, v. eckey, f. scheffel, w. saenger, e. schneider, a. vahedi-faridi
  Keywords: atpase, hydrolase
  
• 2q2h.pdb. chaperone 28-may-07 2q2h
  Title: crystal structure of the protein secretion chaperone csaa from agrobacterium tumefaciens with a genetically fused phage-display derived peptide substrate at the n-terminus.
  Author: a. r. feldman, y. a. shapova, m. paetzel
  Keywords: ob fold, homodimer, chaperone, protein secretion
  
• 2q2i.pdb. chaperone 28-may-07 2q2i
  Title: crystal structure of the protein secretion chaperone csaa from agrobacterium tumefaciens.
  Author: a. r. feldman, y. a. shapova, m. paetzel
  Keywords: ob fold, homodimer, chaperone, protein secretion
  
• 2q2j.pdb. toxin 28-may-07 2q2j
  Title: crystal structure of prtx-i, a pla2 homolog from bothrops pirajai
  Author: j. i. dos santos, m. r. m. fontes
  Keywords: pla2 like, lys49-pla2, phospholipase a2
  
• 2q6v.pdb. transferase 05-jun-07 2q6v
  Title: crystal structure of gumk in complex with udp
  Author: m. barreras
  Keywords: glycosyltransferase, xanthan, xanthomonas campestris, udp, udpglca
  
• 2qmo.pdb. ligase 16-jul-07 2qmo Cl Se
  Title: crystal structure of dethiobiotin synthetase (biod) from helicobacter pylori
  Author: m. chruszcz, x. xu, m. cuff, m. cymborowski, h. zheng, a. savchenko, a. edwards, a. joachimiak, w. minor, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, atp-binding, biotin biosynthesis, ligase, magnesium, nucleotide-binding
  
• 2qqq.pdb. immune system 26-jul-07 2qqq
  Title: crystal structure of novel immune-type receptor 11 extracellular fragment from ictalurus punctatus
  Author: d. a. ostrov, j. a. hernandez-prada, r. n. haire, j. p. cannon, a. t. magis, k. bailey, g. w. litman
  Keywords: immune- type receptor, immune system
  
• 2qw8.pdb. oxidoreductase 09-aug-07 2qw8
  Title: structure of eugenol synthase from ocimum basilicum
  Author: g. v. louie, j. p. noel
  Keywords: phenylpropene, pip reductase, short-chain dehydrogenase/reductase, plant protein, oxidoreductase
  
• 2qxf.pdb. hydrolase 11-aug-07 2qxf Mg Na
  Title: product bound structure of exonuclease i at 1.5 angstrom resolution
  Author: r. d. busam
  Keywords: dnaq superfamily, sh3-like domain, product bound structure, dna damage, dna repair, exonuclease, hydrolase, nuclease
  
• 2r60.pdb. transferase 05-sep-07 2r60
  Title: structure of apo sucrose phosphate synthase (sps) of halothermothrix orenii
  Author: j. sivaraman, t. k. chua
  Keywords: transferase
  
• 2r66.pdb. transferase 05-sep-07 2r66
  Title: complex structure of sucrose phosphate synthase (sps)-f6p of halothermothrix orenii
  Author: j. sivaraman, t. k. chua
  Keywords: transferase
  
• 2r68.pdb. transferase 05-sep-07 2r68
  Title: complex structure of sucrose phosphate synthase (sps)-s6p of halothermothrix orenii
  Author: j. sivaraman, t. k. chua
  Keywords: transferase
  
• 2r6c.pdb. replication 05-sep-07 2r6c Se
  Title: crystal form bh2
  Author: s. bailey, w. k. eliason, t. a. steitz
  Keywords: primase, replication, dnab, dnag
  
• 2r6d.pdb. replication 05-sep-07 2r6d
  Title: crystal form b1
  Author: s. bailey, w. k. eliason, t. a. steitz
  Keywords: replication dnab, hexameric
  
• 2r8b.pdb. structural genomics, unknown function 10-sep-07 2r8b Se
  Title: the crystal structure of the protein atu2452 of unknown function from agrobacterium tumefaciens str. c58
  Author: k. tan, x. xu, h. zheng, a. savchenko, a. m. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: protein atu2452, agrobacterium tumefaciens str. c58, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
  
• 2r8w.pdb. lyase 11-sep-07 2r8w Cl Se
  Title: the crystal structure of dihydrodipicolinate synthase (atu0899) from agrobacterium tumefaciens str. c58
  Author: k. tan, a. dong, x. xu, j. gu, h. zheng, a. m. edwards, a. savchenko, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: dihydrodipicolinate synthase, agrobacterium tumefaciens str. c58, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, lyase
  
• 2ra5.pdb. transcription 14-sep-07 2ra5 Se
  Title: crystal structure of the putative transcriptional regulator from streptomyces coelicolor
  Author: y. kim, x. xu, h. zheng, a. savchenko, a. m. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: utra domain, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, dna-binding, transcription, transcription regulation
  
• 2rda.pdb. transferase 21-sep-07 2rda
  Title: human thymidylate synthase stabilized in active conformation by r163k mutation: asymmetry and reactivity of cys195
  Author: l. m. gibson, l. l. lovelace, l. lebioda
  Keywords: asymmetric, methyltransferase, nucleotide biosynthesis
  
• 2rdf.pdb. hydrolase 22-sep-07 2rdf
  Title: crystal structure of staphyloccocal nuclease viagan/e75a variant at cryogenic temperature
  Author: k. baran, j. l. schlessman, b. e. garcia-moreno
  Keywords: long-range interactions, histidine, hyperstable variant, calcium, endonuclease, hydrolase, membrane, metal-binding, secreted, zymogen
  
• 2v04.pdb. lipid-binding-protein 08-may-07 2v04
  Title: crystal structure of choline binding protein f from streptococcus pneumoniae
  Author: j. hermoso, r. molina, r. kahn, m. stelter
  Keywords: choline-binding-protein, lipid-binding-protein
  
• 2v05.pdb. lipid-binding-protein 08-may-07 2v05
  Title: crystal structure of choline binding protein f from streptococcus pneumoniae. crystal form ii.
  Author: j. hermoso, r. molina, r. kahn, m. stelter
  Keywords: choline-binding-protein, lipid-binding-protein
  
• 2v0y.pdb. lyase 21-may-07 2v0y Cl Mg
  Title: crystal structure of apo c298s tryptophanase from e.coli
  Author: a. kogan, g. y. gdalevsky, r. cohen-luria, y. goldgur, a. h. parola, o. almog
  Keywords: pyridoxal phosphate, tryptophan catabolism
  
• 2v15.pdb. oxidoreductase 22-may-07 2v15 Cl Tb Ca
  Title: terbium binding in streptococcus suis dpr protein
  Author: h. havukainen, a. c. papageorgiou, a. kauko
  Keywords: iron, dps-family, ferroxidase, iron-binding, peroxide resistance, iron storage, metal-binding, ferritin-like
  
• 2v1p.pdb. lyase 28-may-07 2v1p Cl Mg
  Title: crystal structure of the apo form of y74f mutant e. coli tryptophanase
  Author: a. kogan, g. y. gdalevsky, r. cohen-luria, y. goldgur, a. h. parola, o. almog
  Keywords: pyridoxal phosphate, tryptophan catabolism
  
• 2v37.pdb. cell adhesion 13-jun-07 2v37 He Hg (NMR, 20 structures)
  Title: solution structure of the n-terminal extracellular domain of human t-cadherin
  Author: s. a. dames, e. j. bang, t. ahrens, d. haeussinger, s. grzesiek
  Keywords: cleavage on pair of basic residues
  
• 2vpw.pdb. oxidoreductase 09-mar-08 2vpw Mo Fe
  Title: polysulfide reductase with bound menaquinone
  Author: m. jormakka, k. yokoyama, t. yano, m. tamakoshi, s. akimoto, t. shimamura, p. curmi, s. iwata
  Keywords: iron, 4fe-4s, molybdenum, iron-sulfur, metal-binding, oxidoreductase, membrane protein, respiratory enzyme
  
• 2vpx.pdb. oxidoreductase 09-mar-08 2vpx Mo Fe
  Title: polysulfide reductase with bound quinone (uq1)
  Author: m. jormakka, k. yokoyama, t. yano, m. tamakoshi, s. akimoto, t. shimamura, p. curmi, s. iwata
  Keywords: molybdenum, molybdopterin, mpt, molybdopterin guanine dinucleotide, mgd, iron sulfur cluster, fe4s4, integral membrane protein
  
• 2vpy.pdb. oxidoreductase 09-mar-08 2vpy Cl Mo Fe
  Title: polysulfide reductase with bound quinone inhibitor, pentachlorophenol (pcp)
  Author: m. jormakka, k. yokoyama, t. yano, m. tamakoshi, s. akimoto, t. shimamura, p. curmi, s. iwata
  Keywords: molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin, integral membrane protein, mgd, mpt, iron, fe4s4, 4fe-4s, molybdenum, iron sulfur cluster
  
• 2vpz.pdb. oxidoreductase 09-mar-08 2vpz Mo Fe
  Title: polysulfide reductase native structure
  Author: m. jormakka, k. yokoyama, t. yano, m. tamakoshi, s. akimoto, t. shimamura, p. curmi, s. iwata
  Keywords: molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin, integral membrane protein, mgd, mpt, iron, fe4s4, 4fe-4s, molybdenum, iron sulfur cluster
  
• 2vsn.pdb. transferase 28-apr-08 2vsn
  Title: structure and topological arrangement of an o-glcnac transferase homolog: insight into molecular control of intracellular glycosylation
  Author: c. martinez-fleites, m. s. macauley, y. he, d. shen, d. vocadlo, g. j. davies
  Keywords: n- acetylglucosamine, tpr, ogt, glcnac, o-glycosylation, transferase
  
• 2z3f.pdb. chaperone 04-jun-07 2z3f
  Title: crystal structure of spcia1/asf1 complexed with cac2 peptide
  Author: a. d. malay, b. padmanabhan, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2z9i.pdb. hydrolase 20-sep-07 2z9i Se
  Title: crystal structure of rv0983 from mycobacterium tuberculosis- proteolytically active form
  Author: s. k. palaninathan, n. n. mohamedmohaideen, j. c. sacchettini
  Keywords: htra, hydrolase
  
• 2za4.pdb. hydrolase/hydrolase inhibitor 01-oct-07 2za4 Cl
  Title: crystal structural analysis of barnase-barstar complex
  Author: y. urakubo, t. ikura, n. ito
  Keywords: endonuclease, genetically modified food, hydrolase, nuclease, secreted, cytoplasm, hydrolase/hydrolase inhibitor complex
  
• 2zaf.pdb. oxidoreductase 05-oct-07 2zaf
  Title: mechanistic and structural analyses of the roles of arg409 and asp402 in the reaction of the flavoprotein nitroalkane oxidase
  Author: p. f. fitzpatrick, d. m. bozinovski, a. heroux, p. g. shaw, m. p. valley, a. m. orville
  Keywords: flavoenzyme, nitroalkane, flavoprotein
  
• 2zju.pdb. signaling protein 10-mar-08 2zju Cl
  Title: crystal structure of lymnaea stagnalis acetylcholine binding protein (ls-achbp) complexed with imidacloprid
  Author: t. okajima, m. ihara, a. yamashita, t. oda, t. morimoto, k. matsuda
  Keywords: neonicotinoids, nicotinic acetylcholine receptor, imidacloprid, cell junction, glycoprotein, immunoglobulin domain, secreted, synapse, signaling protein
  
• 2zjv.pdb. signaling protein 10-mar-08 2zjv Cl
  Title: crystal structure of lymnaea stagnalis acetylcholine binding protein (ls-achbp) complexed with clothianidin
  Author: t. okajima, m. ihara, a. yamashita, t. oda, t. morimoto, k. matsuda
  Keywords: neonicotinoids, nicotinic acetylcholine receptor, clothianidin, cell junction, glycoprotein, immunoglobulin domain, secreted, synapse, signaling protein
  
• 2zm3.pdb. transferase 10-apr-08 2zm3 Br
  Title: complex structure of insulin-like growth factor receptor and isoquinolinedione inhibitor
  Author: w. xu, s. c. mayer, f. boschelli, m. johnson, b. dwyer
  Keywords: transferase, transmembrane, tyrosine-protein kinase
  
• 2zof.pdb. hydrolase 14-may-08 2zof Mn
  Title: crystal structure of mouse carnosinase cn2 complexed with mn and bestatin
  Author: h. unno, t. yamashita, n. okumura, m. kusunoki
  Keywords: protein-inhibitor complex, cndp2, cndp dipeptidase 2, cn2, bestatin, l-carnosine, carnosinase, mn, carboxypeptidase, hydrolase, metal-binding, metalloprotease, protease, zinc
  
• 2zog.pdb. hydrolase 14-may-08 2zog Zn
  Title: crystal structure of mouse carnosinase cn2 complexed with zn and bestatin
  Author: h. unno, t. yamashita, n. okumura, m. kusunoki
  Keywords: protein-inhibitor complex, cndp2, cndp dipeptidase 2, cn2, bestatin, l-carnosine, carnosinase, zn, carboxypeptidase, hydrolase, metal-binding, metalloprotease, protease, zinc
  
• 2zok.pdb. immune system 22-may-08 2zok
  Title: crystal structure of h-2db in complex with jhmv epitope s510
  Author: a. theodossis, m. a. dunstone, j. rossjohn
  Keywords: host-virus interaction, virion, virulence
  
• 2zol.pdb. immune system 22-may-08 2zol
  Title: crystal structure of h-2db in complex with the w513s variant of jhmv epitope s510
  Author: a. theodossis, m. a. dunstone, j. rossjohn
  Keywords: host-virus interaction, virion, virulence
  
• 3b64.pdb. cytokine 27-oct-07 3b64
  Title: macrophage migration inhibitory factor (mif) from /leishmania major
  Author: s. zierow, y. cho, e. lolis
  Keywords: leishmania, macrophage migration inhibitory factor, mif, lm1740mif, lmmif, unknown function
  
• 3bdz.pdb. unknown function 15-nov-07 3bdz Fe
  Title: the role of asn 242 in p450cin
  Author: y. t. meharenna, t. l. poulos
  Keywords: unknown function
  
• 3be0.pdb. unknown function 15-nov-07 3be0 Fe
  Title: the role of asn 242 in p450cin
  Author: y. t. meharenna, t. l. poulos
  Keywords: unknown function
  
• 3bfa.pdb. pheromone binding protein 21-nov-07 3bfa
  Title: crystal structure of a pheromone binding protein from apis mellifera in complex with the queen mandibular pheromone
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: apis mellifera, pheromone binding protein, signal transduction, queen mandibular pheromone, pheromone-binding protein
  
• 3bfb.pdb. pheromone binding protein 21-nov-07 3bfb Cl
  Title: crystal structure of a pheromone binding protein from apis mellifera in complex with the 9-keto-2(e)-decenoic acid
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: apis mellifera, pheromone binding protein, signal transduction, queen mandibular pheromone, pheromone-binding protein
  
• 3bfh.pdb. pheromone binding protein 21-nov-07 3bfh Cl
  Title: crystal structure of a pheromone binding protein from apis mellifera in complex with hexadecanoic acid
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: apis mellifera, pheromone binding protein, signal transduction, queen mandibular pheromone, hexadecanoic acid, pheromone-binding protein
  
• 3bgd.pdb. transferase 26-nov-07 3bgd
  Title: thiopurine s-methyltransferase
  Author: y. peng, v. c. yee
  Keywords: cytoplasm, s-adenosyl-l-methionine
  
• 3bgi.pdb. transferase 26-nov-07 3bgi
  Title: thiopurine s-methyltransferase
  Author: y. peng, v. c. yee
  Keywords: cytoplasm, s-adenosyl-l-methionine
  
• 3bi3.pdb. oxidoreductase/dna 29-nov-07 3bi3 Mn
  Title: x-ray structure of alkb protein bound to dsdna containing 1mea/a with cofactors
  Author: c. yi, c. -g. yang
  Keywords: protein dna interaction, alkylation repair, dna damage, dna repair, iron, metal-binding, oxidoreductase, oxidoreductase/dna complex
  
• 3bjh.pdb. pheromone binding protein 04-dec-07 3bjh
  Title: soft-sad crystal structure of a pheromone binding protein from the honeybee apis mellifera l.
  Author: a. lartigue, a. gruez, l. briand, f. blon, v. bezirard, m. walsh, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: apis mellifera, pheromone binding protein, signal transduction
  
• 3bkk.pdb. hydrolase 07-dec-07 3bkk Cl Zn
  Title: tesis ace co-crystal structure with ketone ace inhibitor kaf
  Author: j. m. watermeyer, b. t. sewell
  Keywords: zinc
  
• 3bkl.pdb. hydrolase 07-dec-07 3bkl Cl Zn
  Title: tesis ace co-crystal structure with ketone ace inhibitor kaw
  Author: j. m. watermeyer, b. t. sewell
  Keywords: zinc
  
• 3bl6.pdb. hydrolase 10-dec-07 3bl6
  Title: crystal structure of staphylococcus aureus 5'- methylthioadenosine/s-adenosylhomocysteine nucleosidase in complex with formycin a
  Author: k. k. w. siu, j. e. lee, g. d. smith, c. horvatin, p. l. howell
  Keywords: mtan, alpha and beta proteins, hydrolase
  
• 3bm0.pdb. deoxyribonucleic acid 11-dec-07 3bm0 Se
  Title: structure of dna octamer g(duse)g(5-sedu)acac
  Author: j. jiang, j. sheng, a. e. a. hassan, z. huang
  
  
• 3bnx.pdb. lyase 14-dec-07 3bnx Mg
  Title: crystal structure of aristolochene synthase complexed with farnesyl diphosphate
  Author: e. y. shishova, d. w. christianson
  Keywords: farnesyl diphosphate, isoprenoid, magnesium, cyclization, lyase
  
• 3bny.pdb. lyase 14-dec-07 3bny Cl Mg F
  Title: crystal structure of aristolochene synthase complexed with 2-fluorofarnesyl diphosphate (2f-fpp)
  Author: e. y. shishova, d. w. christianson
  Keywords: isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase
  
• 3bqb.pdb. lyase 20-dec-07 3bqb Mg
  Title: hexagonal kristal form of 2-keto-3-deoxyarabinonate dehydratase
  Author: t. m. barends, s. brouns, p. worm, j. akerboom, a. turnbull, l. salmon
  Keywords: lyase
  
• 3bry.pdb. transport protein 21-dec-07 3bry
  Title: crystal structure of the ralstonia pickettii toluene transporter tbux
  Author: e. m. hearn, d. r. patel, b. van den berg
  Keywords: outer membrane protein, transport protein
  
• 3brz.pdb. transport protein 21-dec-07 3brz
  Title: crystal structure of the pseudomonas putida toluene transporter todx
  Author: e. m. hearn, d. r. patel, b. van den berg
  Keywords: outer membrane protein, transport protein
  
• 3bs0.pdb. transport protein 21-dec-07 3bs0
  Title: crystal structure of the p. putida toluene transporter todx
  Author: e. m. hearn, d. r. patel, b. van den berg
  Keywords: outer membrane protein, transport protein
  
• 3btx.pdb. oxidoreductase/dna 31-dec-07 3btx Mg
  Title: x-ray structure of human abh2 bound to dsdna through active site cross-linking
  Author: c. -g. yang, c. yi, c. he
  Keywords: human dioxygenase, dna repair, cross-linking, dna damage, iron, metal-binding, nucleus, oxidoreductase, oxidoreductase/dna complex
  
• 3bty.pdb. oxidoreductase/dna 31-dec-07 3bty
  Title: crystal structure of human abh2 bound to dsdna containing 1mea through cross-linking away from active site
  Author: c. -g. yang, c. yi, c. he
  Keywords: human dioxygenase, dna repair, cross-linking, dna damage, iron, metal-binding, nucleus, oxidoreductase, oxidoreductase/dna complex
  
• 3btz.pdb. oxidoreductase/dna 31-dec-07 3btz
  Title: crystal structure of human abh2 cross-linked to dsdna
  Author: c. -g. yang, c. yi, c. he
  Keywords: human dioxygenase, cross-link, dna repair, dna damage, iron, metal-binding, nucleus, oxidoreductase, oxidoreductase/dna complex
  
• 3bu0.pdb. oxidoreductase/dna 31-dec-07 3bu0 Mn
  Title: crystal structure of human abh2 cross-linked to dsdna with cofactors
  Author: c. -g. yang, c. yi, c. he
  Keywords: human dioxygenase, dna repair, cross-link, dna damage, iron, metal-binding, nucleus, oxidoreductase, oxidoreductase/dna complex
  
• 3buc.pdb. oxidoreductase/dna 02-jan-08 3buc Mn
  Title: x-ray structure of human abh2 bound to dsdna with mn(ii) and 2kg
  Author: c. -g. yang, c. yi, c. he
  Keywords: human dioxygenase, dna repair, cross-link, dna damage, iron, metal-binding, nucleus, oxidoreductase, oxidoreductase/dna complex
  
• 3bxd.pdb. oxidoreductase 13-jan-08 3bxd He Hg Fe
  Title: crystal structure of mouse myo-inositol oxygenase (re- refined)
  Author: b. m. hallberg
  Keywords: hd domain fold, diiron, oxidoreductase
  
• 3bza.pdb. oxidoreductase 17-jan-08 3bza Cl Mn Ca
  Title: structure of mn-substituted homoprotocatechuate 2,3- dioxygenase from b.fuscum at 1.7 ang resolution
  Author: e. g. kovaleva, j. d. lipscomb
  Keywords: oxygenase, extradiol, mn ii, metal substitution, dioxygenase
  
• 3bzu.pdb. oxidoreductase 18-jan-08 3bzu F
  Title: crystal structure of human 11-beta-hydroxysteroid dehydrogenase(hsd1) in complex with nadp and thiazolone inhibitor
  Author: x. min, a. sudom, h. xu, z. wang, n. p. walker
  Keywords: endoplasmic reticulum, glycoprotein, lipid metabolism, membrane, microsome, nadp, oxidoreductase, polymorphism, signal-anchor, steroid metabolism, transmembrane
  
• 3c3o.pdb. transport protein 28-jan-08 3c3o
  Title: alix bro1-domain:chmip4a co-crystal structure
  Author: j. b. mccullough, r. d. fisher, f. g. whitby, w. i. sundquist, c. p. hill
  Keywords: apoptosis, cytoplasm, host-virus interaction, polymorphism, protein transport, transport, coiled coil, cytoplasmic vesicle, lipid-binding, membrane, transport protein
  
• 3c3q.pdb. transport protein 28-jan-08 3c3q
  Title: alix bro1-domain:chmip4b co-crystal structure
  Author: j. b. mccullough, r. d. fisher, f. g. whitby, w. i. sundquist, c. p. hill
  Keywords: cataract, coiled coil, cytoplasm, disease mutation, protein transport, transport, apoptosis, host-virus interaction, polymorphism, transport protein
  
• 3c3r.pdb. transport protein 28-jan-08 3c3r
  Title: alix bro1 chmp4c complex
  Author: j. b. mccullough, r. d. fisher, f. g. whitby, w. i. sundquist, c. p. hill
  Keywords: apoptosis, cytoplasm, host-virus interaction, polymorphism, protein transport, transport, coiled coil, transport protein
  
• 3c5v.pdb. hydrolase 01-feb-08 3c5v
  Title: pp2a-specific methylesterase apo form (pme)
  Author: y. xing, z. li, y. chen, j. stock, p. d. jeffrey, y. shi
  Keywords: pp2a, alternative splicing, hydrolase, phosphoprotein, serine esterase
  
• 3c5w.pdb. hydrolase 01-feb-08 3c5w
  Title: complex between pp2a-specific methylesterase pme-1 and pp2a core enzyme
  Author: y. xing, z. li, y. chen, j. stock, p. d. jeffrey, y. shi
  Keywords: phosphatase, pp2a, hydrolase
  
• 3c67.pdb. hydrolase 04-feb-08 3c67 Ca
  Title: escherichia coli k12 ygjk in a complexed with glucose
  Author: y. kurakata, a. uechi, h. yoshida, s. kamitori, y. sakano, a. nishikawa, t. tonozuka
  Keywords: processing alpha-glucosidase, alpha/alpha barrel, hydrolase
  
• 3c68.pdb. hydrolase 04-feb-08 3c68 Ca
  Title: escherichia coli k12 ygjk in a complexed with mannose
  Author: y. kurakata, a. uechi, h. yoshida, s. kamitori, y. sakano, a. nishikawa, t. tonozuka
  Keywords: processing alpha-glucosidase, alpha/alpha barrel, hydrolase
  
• 3c69.pdb. hydrolase 04-feb-08 3c69 Ca
  Title: escherichia coli k12 ygjk in a complexed with galactose
  Author: y. kurakata, a. uechi, h. yoshida, s. kamitori, y. sakano, a. nishikawa, t. tonozuka
  Keywords: processing alpha-glucosidase, alpha/alpha barrel, hydrolase
  
• 3cab.pdb. pheromone-binding protein 19-feb-08 3cab
  Title: crystal structure of a pheromone binding protein from apis mellifera soaked at ph 7.0
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: apis mellifera, pheromone binding protein, signal transduction, queen mandibular pheromone, pheromone-binding protein
  
• 3caj.pdb. lyase 20-feb-08 3caj Hg Cl Zn
  Title: crystal structure of the human carbonic anhydrase ii in complex with ethoxzolamide
  Author: a. di fiore, g. de simone
  Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
  
• 3cb2.pdb. structural protein, hydrolase 21-feb-08 3cb2
  Title: crystal structure of human gamma-tubulin bound to gdp
  Author: l. m. rice, e. a. montabana, d. a. agard
  Keywords: lattice, microtubule, nucleation, gtpase, lateral interaction, structural protein, hydrolase
  
• 3cbg.pdb. transferase 22-feb-08 3cbg Mg
  Title: functional and structural characterization of a cationdependent o-methyltransferase from the cyanobacterium synechocystis sp. strain pcc 6803
  Author: j. g. kopycki, p. neumann, m. t. stubbs
  Keywords: cyanobacterium
  
• 3cbj.pdb. hydrolase/hydrolase inhibitor 22-feb-08 3cbj
  Title: chagasin-cathepsin b complex
  Author: i. redzynia, g. d. bujacz, m. abrahamson, a. ljunggren, m. jaskolski, j. s. mort
  Keywords: hydrolase/hydrolase inhibitor complex
  
• 3cdn.pdb. pheromone-binding protein 27-feb-08 3cdn Cl
  Title: crystal structure of a pheromone binding protein from apis mellifera soaked at ph 4.0
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: apis mellifera, pheromone binding protein, signal transduction, queen mandibular pheromone, pheromone-binding protein
  
• 3cei.pdb. oxidoreductase 29-feb-08 3cei Fe
  Title: crystal structure of superoxide dismutase from helicobacter pylori
  Author: l. esposito, a. seydel, r. aiello, g. sorrentino, l. cendron, g. zanotti, a. zagari
  
  
• 3cfs.pdb. histone/chaperone 04-mar-08 3cfs As
  Title: structural basis of the interaction of rbap46/rbap48 with histone h4
  Author: j. v. pratap, m. sparkes, j. vicente-garcia, t. r. ben-shahar, a. verreault
  Keywords: chromosomal protein, nucleosome core, histone/chaperone complex
  
• 3cfv.pdb. histone/chaperone 04-mar-08 3cfv Se As
  Title: structural basis of the interaction of rbap46/rbap48 with histone h4
  Author: w. zhang, s. mclaughlin, t. r. ben-shahar, a. verreault
  Keywords: chromosomal protein, dna-binding, nucleosome core, histone/chaperone complex
  
• 3cgf.pdb. transferase 05-mar-08 3cgf
  Title: irak-4 inhibitors (part ii)- a structure based assessment of imidazo[1,2 a]pyridine binding
  Author: t. a. ceska, a. platt, m. fortunato, k. m. dickson, g. buckley
  Keywords: alternative splicing, atp- binding, chromosomal rearrangement, cytoplasm, epilepsy, nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase
  
• 3cgo.pdb. transferase 06-mar-08 3cgo
  Title: irak-4 inhibitors (part ii)- a structure based assessment of imidazo[1,2 a]pyridine binding
  Author: t. a. ceska, a. platt, m. fortunato, k. m. dickson, r. beevers
  Keywords: inhibitor, alternative splicing, atp-binding, chromosomal rearrangement, cytoplasm, epilepsy, nucleotide- binding, phosphoprotein, serine/threonine-protein kinase, transferase
  
• 3ch6.pdb. oxidoreductase 07-mar-08 3ch6 F
  Title: crystal structure of 11beta-hsd1 double mutant (l262r, f278e) complexed with (3,3-dimethylpiperidin-1-yl)(6-(3- fluoro-4-methylphenyl)pyridin-2-yl)methanone
  Author: s. sheriff
  Keywords: sdr, dehydrogenase, hydroxysteroid, inhibitor, oxidoreductase
  
• 3cib.pdb. hydrolase 11-mar-08 3cib F
  Title: structure of bace bound to sch727596
  Author: c. strickland, j. cumming
  Keywords: aspartyl protease, hydrolase
  
• 3cic.pdb. hydrolase 11-mar-08 3cic F
  Title: structure of bace bound to sch709583
  Author: c. strickland, j. cumming
  Keywords: aspartyl protease, hydrolase
  
• 3cid.pdb. hydrolase 11-mar-08 3cid F
  Title: structure of bace bound to sch726222
  Author: c. strickland, j. cumming
  Keywords: aspartyl protease, hydrolase
  
• 3cl4.pdb. hydrolase 18-mar-08 3cl4 K
  Title: crystal structure of bovine coronavirus hemagglutinin- esterase
  Author: q. h. zeng, m. a. langereis, a. l. w. van vliet, e. g. huizinga, r. j. de groot
  Keywords: swiss roll, envelope protein, glycoprotein, hemagglutinin, membrane, transmembrane, virion
  
• 3cl5.pdb. hydrolase 18-mar-08 3cl5 K
  Title: structure of coronavirus hemagglutinin-esterase in complex with 4,9-o-diacetyl sialic acid
  Author: q. h. zeng, m. a. langereis, a. l. w. van vliet, e. g. huizinga, r. j. de groot
  Keywords: swiss roll, envelope protein, glycoprotein, hemagglutinin, membrane, transmembrane, virion
  
• 3cl6.pdb. hydrolase 18-mar-08 3cl6
  Title: crystal structure of puue allantoinase
  Author: i. ramazzina, l. cendron, c. folli, r. berni, d. monteverdi, g. zanotti, r. percudani
  Keywords: uric acid, nitrogen fixation, hydrolase
  
• 3cl7.pdb. hydrolase 18-mar-08 3cl7
  Title: crystal structure of puue allantoinase in complex with hydantoin
  Author: i. ramazzina, l. cendron, c. folli, r. berni, d. monteverdi, g. zanotti, r. percudani
  Keywords: uric acid degradation, hydantoin, hydrolase
  
• 3cl8.pdb. hydrolase 18-mar-08 3cl8
  Title: crystal structure of puue allantoinase complexed with aca
  Author: i. ramazzina, l. cendron, c. folli, r. berni, d. monteverdi, g. zanotti, r. percudani
  Keywords: allantoinase, uric acid degradation, amino imidazole carboximide, hydrolase
  
• 3cnj.pdb. oxidoreductase 25-mar-08 3cnj
  Title: cholesterol oxidase from streptomyces sp. f359w mutant (0.95a)
  Author: a. y. lyubimov, l. brammer, a. vrielink
  Keywords: flavin, oxidoreductase, oxygen tunnel, cholesterol oxidase, cholesterol metabolism, fad, flavoprotein, lipid metabolism, secreted, steroid metabolism
  
• 3co3.pdb. deoxyribonucleic acid 27-mar-08 3co3 Pt
  Title: x-ray crystal structure of a monofunctional platinum-dna adduct, cis-{pt(nh3)2(pyridine)}2+ bound to deoxyguanosine in a dodecamer duplex
  Author: k. s. lovejoy, r. c. todd, s. zhang, m. s. mccormick, j. a. d'aquino, j. t. reardon, a. sancar, k. m. giacomini, s. j. lippard
  Keywords: cisplatin, monofunctional pt compound
  
• 3cqu.pdb. transferase 03-apr-08 3cqu
  Title: crystal structure of akt-1 complexed with substrate peptide and inhibitor
  Author: j. pandit
  Keywords: serine/threonine-protein kinase, sugar transport, transferase, translation regulation, transport, alternative splicing, wnt signaling pathway
  
• 3cqw.pdb. transferase 03-apr-08 3cqw Cl Mn
  Title: crystal structure of akt-1 complexed with substrate peptide and inhibitor
  Author: j. pandit
  Keywords: serine/threonine-protein kinase, sugar transport, transferase, translation regulation, transport, alternative splicing, wnt signaling pathway
  
• 3crv.pdb. hydrolase 07-apr-08 3crv Fe
  Title: "xpd_helicase"
  Author: l fan, a. s. arvai, j. a. tainer
  Keywords: helicase, hydrolase
  
• 3crw.pdb. hydrolase 07-apr-08 3crw Fe
  Title: "xpd_apo"
  Author: l fan, a. s. arvai, j. a. tainer
  Keywords: helicase, hydrolase
  
• 3csk.pdb. hydrolase 10-apr-08 3csk Mg Zn
  Title: structure of dpp iii from saccharomyces cerevisiae
  Author: p. k. baral, n. jajcanin, s. deller, p. macheroux, m. abramic, k. gruber
  Keywords: aminodipeptidase, hexxgh-motif, aminopeptidase, cytoplasm, hydrolase, metal-binding, metalloprotease, protease, zinc
  
• 3csx.pdb. metal binding protein,unknown function 10-apr-08 3csx Ni
  Title: structural characterization of a protein in the duf683 family- crystal structure of cce_0567 from the cyanobacterium cyanothece 51142.
  Author: a. addlagatta, h. robinson, g. w. buchko
  Keywords: nitrogen fixation, cyanobacteria, circadian rhythms, metal binding protein, unknown function
  
• 3cth.pdb. transferase 14-apr-08 3cth F
  Title: crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor c-met in complex with a aminopyridine based inhibitor
  Author: j. sack
  Keywords: signal transduction, grb2, shc, atp-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene, transferase, transmembrane, tyrosine-protein kinase
  
• 3ctj.pdb. transferase 14-apr-08 3ctj F
  Title: crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor c-met in complex with a aminopyridine based inhibitor
  Author: j. sack
  Keywords: signal transduction, grb2, shc, atp-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene, transferase, transmembrane, tyrosine-protein kinase
  
• 3cu7.pdb. immune system 16-apr-08 3cu7 Cd
  Title: human complement component 5
  Author: f. fredslund, g. r. andersen
  Keywords: innate immunity, membrane attack complex, polymorphism, secreted, immune system
  
• 3cwe.pdb. hydrolase 21-apr-08 3cwe Mg F Br
  Title: ptp1b in complex with a phosphonic acid inhibitor
  Author: g. scapin, y. han, b. p. kennedy
  Keywords: phosphonates, diabetes, inhibitor, acetylation, endoplasmic reticulum, hydrolase, membrane, oxidation, phosphoprotein, polymorphism, protein phosphatase
  
• 3czb.pdb. structural genomics, unknown function 28-apr-08 3czb
  Title: crystal structure of putative transglycosylase from caulobacter crescentus
  Author: u. a. ramagopal, k. chattopadhyay, r. toro, s. wasserman, j. freeman, c. logan, k. bain, t. gheyi, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: unknown function, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 3d24.pdb. transcription 07-may-08 3d24
  Title: crystal structure of ligand-binding domain of estrogen- related receptor alpha (erralpha) in complex with the peroxisome proliferators-activated receptor coactivator- 1alpha box3 peptide (pgc-1alpha)
  Author: d. moras, h. greschik, r. flaig, y. sato, n. rochel, structural proteomics in europe (spine)
  Keywords: structural proteomics in europe, spine
  
• 3d26.pdb. viral protein 07-may-08 3d26
  Title: norwalk p domain a-trisaccharide complex
  Author: r. hegde, w. bu
  Keywords: viral protein
  
• 3d29.pdb. hydrolase 07-may-08 3d29
  Title: proteasome inhibition by fellutamide b
  Author: m. groll, j. hines, m. fahnestock, m. c. crews
  Keywords: cytoplasm, hydrolase, nucleus, protease, proteasome, threonine protease, ubl conjugation, phosphoprotein, zymogen
  
• 3d31.pdb. transport protein 09-may-08 3d31 W
  Title: modbc from methanosarcina acetivorans
  Author: s. gerber, m. comellas-bigler, k. p. locher
  Keywords: nucleotide-binding, transport, membrane, transmembrane, transport protein
  
• 3d3n.pdb. hydrolase 12-may-08 3d3n Ca Se
  Title: crystal structure of lipase/esterase (lp_2923) from lactobacillus plantarum. northeast structural genomics consortium target lpr108
  Author: f. forouhar, m. su, j. seetharaman, l. mao, h. janjua, r. xiao, c. ciccosanti, m. maglaqui, e. l. foote, l. zhao, j. k. everett, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, hydrolase
  
• 3d5l.pdb. signaling protein 16-may-08 3d5l
  Title: crystal structure of regulatory protein recx
  Author: r. agarwal, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
  Keywords: psi-ii, nysgxrc, recx, dna repair, 10123k, structural genomics, protein structure initiative, new york structural genomix research consortium, cytoplasm, signaling protein
  
• 3d6t.pdb. transferase 20-may-08 3d6t Mg Se
  Title: structure of the roc domain from the parkinson's disease- associated leucine-rich repeat kinase 2 reveals a dimeric gtpase
  Author: j. deng
  Keywords: polymorphism, serine/threonine-protein kinase, transferase
  
• 3d82.pdb. structural genomics, unknown function 22-may-08 3d82 Ni Se
  Title: crystal structure of domain of unknown function with a cupin fold (yp_752209.1) from shewanella frigidimarina ncimb 400 at 2.05 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: domain of unknown function with a cupin fold, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, cupin domain, unknown function
  
• 3d8d.pdb. protein binding 23-may-08 3d8d Hg
  Title: crystal structure of the human fe65-ptb1 domain
  Author: j. radzimanowski, s. ravaud, i. sinning, k. wild
  Keywords: phosphotyrosine binding domain, alternative splicing, polymorphism, protein binding
  
• 3d8e.pdb. protein binding 23-may-08 3d8e
  Title: crystal structure of the human fe65-ptb1 domain (trigonal crystal form)
  Author: j. radzimanowski, s. ravaud, i. sinning, k. wild
  Keywords: phosphotyrosine binding domain, protein binding
  
• 3d8f.pdb. protein binding 23-may-08 3d8f
  Title: crystal structure of the human fe65-ptb1 domain with bound phosphate (trigonal crystal form)
  Author: j. radzimanowski, s. ravaud, i. sinning, k. wild
  Keywords: phosphotyrosine binding domain, protein binding
  
• 3d9a.pdb. hydrolase/immune system 27-may-08 3d9a
  Title: high resolution crystal structure structure of hyhel10 fab complexed to hen egg lysozyme
  Author: m. e. desantis, m. li, a. shanmuganathan, m. acchione, r. walter, a. wlodawer, s. smith-gill
  Keywords: hyhel10, fab, antibody, antigen, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase, hydrolase/immune system complex
  
• 3d9i.pdb. transcription 27-may-08 3d9i
  Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
  Author: r. becker, b. loll, a. meinhart
  Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
  
• 3d9j.pdb. transcription 27-may-08 3d9j
  Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
  Author: r. becker, b. loll, a. meinhart
  Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
  
• 3d9k.pdb. transcription 27-may-08 3d9k
  Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
  Author: r. becker, b. loll, a. meinhart
  Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
  
• 3d9l.pdb. transcription 27-may-08 3d9l
  Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
  Author: r. becker, b. loll, a. meinhart
  Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
  
• 3d9m.pdb. transcription 27-may-08 3d9m
  Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
  Author: r. becker, b. loll, a. meinhart
  Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
  
• 3d9n.pdb. transcription 27-may-08 3d9n
  Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
  Author: r. becker, b. loll, a. meinhart
  Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
  
• 3d9o.pdb. transcription 27-may-08 3d9o Se
  Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
  Author: r. becker, b. loll, a. meinhart
  Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
  
• 3d9p.pdb. transcription 27-may-08 3d9p
  Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
  Author: r. becker, b. loll, a. meinhart
  Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
  
• 3d9t.pdb. apoptosis 27-may-08 3d9t Zn
  Title: ciap1-bir3 in complex with n-terminal peptide from caspase- 9 (atpfqe)
  Author: r. kulathila, a. price
  Keywords: apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease, thiol protease, zymogen
  
• 3d9u.pdb. apoptosis 27-may-08 3d9u Zn
  Title: the bir3 domain of ciap1 in complex with the n terminal peptide from smac/diablo (avpiaq).
  Author: r. kulathila, a. price
  Keywords: apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger
  
• 3d9v.pdb. transferase 27-may-08 3d9v
  Title: crystal structure of rock i bound to h-1152p a di- methylated variant of fasudil
  Author: m. jacobs
  Keywords: polymorphism, serine/threonine-protein kinase, transferase, zinc, zinc- finger
  
• 3dah.pdb. transferase 29-may-08 3dah
  Title: 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from burkholderia pseudomallei
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: pseudomallei, ribose, phosphate, pyrophosphokinase, seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium, metal binding, nucleotide biosynthesis, transferase
  
• 3dar.pdb. transferase 30-may-08 3dar
  Title: crystal structure of d2 domain from human fgfr2
  Author: a. brown, t. l. blundell
  Keywords: membrane, nucleotide-binding, phosphoprotein, polymorphism, receptor, secreted, transferase, transmembrane, tyrosine-protein kinase