Recent PDB releases or updates: week of 6 June 2008

• 1mki.pdb. hydrolase 29-aug-02 1mki Se
  Title: crystal structure of bacillus subtilis probable glutaminase, apc1040
  Author: y. kim, i. dementieva, e. vinokour, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: probable glutaminase, psi, protein structure initiative, midwest center for structural genomics, mcsg, hydrolase
  
• 1u60.pdb. hydrolase 28-jul-04 1u60
  Title: mcsg apc5046 probable glutaminase ybas
  Author: c. chang, m. e. cuff, a. joachimiak, a. savchenko, a. edwards, t. skarina, midwest center for structural genomics, midwest center for structural genomics (mcsg)
  Keywords: apc5046, psi, protein structure initiative, midwest center for structural genomics, mcsg, hydrolase
  
• 2dyu.pdb. hydrolase 18-sep-06 2dyu
  Title: helicobacter pylori formamidase amif contains a fine-tuned cysteine-glutamate-lysine catalytic triad
  Author: w. c. wang, c. l. hung
  Keywords: amif, cek, catalytic triad, helicobacter pylori, aliphatic amidase, hydrolase
  
• 2dyv.pdb. hydrolase 18-sep-06 2dyv
  Title: helicobacter pylori formamidase amif contains a fine-tuned cysteine-glutamate-lysine catalytic triad
  Author: w. c. wang, c. l. hung
  Keywords: amif, cek, catalytic triad, helicobacter pylori, aliphatic amidase, hydrolase
  
• 2e2k.pdb. hydrolase 14-nov-06 2e2k
  Title: helicobacter pylori formamidase amif contains a fine-tuned cysteine-glutamate-lysine catalytic triad
  Author: w. c. wang, c. l. hung
  Keywords: amif, cek, catalytic triad, helicobacter pylori, aliphatic amidase, c166s, hydrolase
  
• 2e2l.pdb. hydrolase 14-nov-06 2e2l
  Title: helicobacter pylori formamidase amif contains a fine-tuned cysteine-glutamate-lysine catalytic triad
  Author: w. c. wang, c. l. hung
  Keywords: amif, cek, catalytic triad, helicobacter pylori, aliphatic amidase, c166s-formamide, hydrolase
  
• 2fe1.pdb. structural genomics, unknown function 15-dec-05 2fe1 Cl Mn Ca
  Title: crystal structure of pae0151 from pyrobaculum aerophilum
  Author: r. d. bunker, e. n. baker, v. l. arcus
  Keywords: structural genomics, unknown function
  
• 2gte.pdb. transport protein 27-apr-06 2gte
  Title: drosophila obp lush bound to attractant pheromone 11-cis- vaccenyl acetate
  Author: j. d. laughlin, t. ha, d. p. smith, d. n. m. jones
  Keywords: odorant binding protein, pheromone, transport protein
  
• 2h6p.pdb. immune system 31-may-06 2h6p
  Title: crystal structure of hla-b*3501 presenting the human cytochrome p450 derived peptide, kpivvlhgy
  Author: j. k. archbold, w. a. macdonald, j. rossjohn
  Keywords: gene regulation
  
• 2jhq.pdb. hydrolase 23-feb-07 2jhq Cl
  Title: crystal structure of uracil dna-glycosylase from vibrio cholerae
  Author: i. l. raeder, e. moe, n. p. willassen, a. o. smalas, i. leiros
  Keywords: mutational analysis, psychrophilic enzymes, uracil-dna n- glycosylase, cold adaptation, vibrio cholerae, vibrio salmonicida, ung, hydrolase, dna damage, dna repair, glycosidase
  
• 2jpy.pdb. antimicrobial protein 24-may-07 2jpy Hg (NMR, 10 structures)
  Title: phylloseptin-2
  Author: j. m. resende, c. mendonca moraes, f. c. l. almeida, m. v. prates, a. cesar, a. valente, m. p. bemquerer, d. pilo-veloso, b. bechinger
  Keywords: alpha helix, amphipathic character, c-terminal carboxyamidation, antimicrobial protein
  
• 2jq0.pdb. antimicrobial protein 25-may-07 2jq0 Hg (NMR, 10 structures)
  Title: phylloseptin-1
  Author: j. m. resende, c. mendonca moraes, f. c. l. almeida, m. v. prates, a. cesar, a. valente, m. p. bemquerer, d. pilo-veloso, b. bechinger
  Keywords: alpha-helix, amphipathic character, c-terminal carboxyamidation, antimicrobial protein
  
• 2jq1.pdb. antimicrobial protein 25-may-07 2jq1 Hg (NMR, 10 structures)
  Title: phylloseptin-3
  Author: j. m. resende, c. mendonca moraes, f. c. l. almeida, m. v. prates, a. cesar, a. valente, m. p. bemquerer, d. pilo-veloso, b. bechinger
  Keywords: alpha-helix, amphipathic character, c-terminal carboxyamidation, antimicrobial protein
  
• 2jqb.pdb. toxin 31-may-07 2jqb Hg (NMR, 20 structures)
  Title: solution structure of a novel d-amino acid containing conopeptide, conomarphin at ph 5
  Author: f. huang, w. du, y. han, c. wang, c. chi
  Keywords: mr12, nmr solution structure
  
• 2jys.pdb. hydrolase 19-dec-07 2jys He Hg (NMR, 20 structures)
  Title: solution structure of simian foamy virus (mac) protease
  Author: m. j. hartl, b. m. woehrl, p. roesch, k. schweimer
  Keywords: hydrolase
  
• 2k10.pdb. antimicrobial protein 19-feb-08 2k10 Hg (NMR, 20 structures)
  Title: confirmational analysis of the broad-spectrum antibacterial peptide, rantuerin-2csa: identification of a full length helix-turn-helix motif
  Author: c. m. hewage, a. p. subasinghage, m. conlon
  Keywords: molecular modelling, helix-turn-helix, disulfide bond, antimicrobial peptide, antimicrobial protein
  
• 2k11.pdb. hydrolase 20-feb-08 2k11 He Hg (NMR, 20 structures)
  Title: solution structure of human pancreatic ribonuclease
  Author: k. e. kover, m. bruix, j. santoro, g. batta, d. v. laurents, m. rico
  Keywords: endonuclease, glycoprotein, nuclease, secreted
  
• 2k31.pdb. hydrolase 16-apr-08 2k31 He Hg Ho (NMR, 20 structures)
  Title: solution structure of cgmp-binding gaf domain of phosphodiesterase 5
  Author: c. c. heikaus, j. r. stout, m. r. sekharan, c. m. eakin, p. rajagopal, p. s. brzovic, j. a. beavo, r. e. klevit
  Keywords: pde5, gaf domain, cgmp, nmr, hydrolase
  
• 2k3c.pdb. metal transport 01-may-08 2k3c Hg (NMR, 40 structures)
  Title: structural and functional characterization of tm ix of the nhe1 isoform of the na+/h+ exchanger
  Author: t. reddy, j. ding, x. li, b. d. sykes, l. fliegel, j. k. rainey
  Keywords: dodecylphosphocholine micelle, nhe1, na+/h+ transporter, metal transport
  
• 2k3k.pdb. rna binding protein 12-may-08 2k3k He Hg (NMR, 20 structures)
  Title: solution structure of drosophila melanogaster snf rbd1
  Author: c. liu, g. cui, j. hu, c. jin, b. xia
  Keywords: snf rbd1, rna binding, rna splicing, solution structure, mrna processing, mrna splicing, nucleus, ribonucleoprotein, rna-binding, spliceosome
  
• 2nmq.pdb. signaling protein 23-oct-06 2nmq (NMR)
  Title: simultaneous determination of protein structure and dynamics using rdcs
  Author: m. blackledge, g. bouvignies, r. brueschweiler, p. markwick
  Keywords: nmr, simultaneous structure and dynamics, high resolution, signaling protein
  
• 2oqw.pdb. hydrolase 01-feb-07 2oqw Se
  Title: the crystal structure of sortase b from b.anthracis in complex with aaek1
  Author: r. wu, r. zhang, a. w. marresso, o. schneewind, a. joachimiak
  Keywords: inhibitor, b. anthracis, the great lakes regional center of excellence, glrce, hydrolase
  
• 2oxq.pdb. ligase 20-feb-07 2oxq Cl
  Title: structure of the ubch5 :chip u-box complex
  Author: z. xu, j. c. nix, k. i. devlin, s. misra
  Keywords: ligase
  
• 2p0r.pdb. hydrolase 01-mar-07 2p0r Ca
  Title: structure of human calpain 9 in complex with leupeptin
  Author: t. l. davis, r. paramanathan, j. r. walker, c. butler-cole, p. j. finerty jr. , j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
  
  
• 2p3m.pdb. transferase 09-mar-07 2p3m He Hg (NMR, 20 structures)
  Title: solution structure of mj0056
  Author: m. coles, v. truffault, s. djuranovic, j. martin, a. n. lupas
  Keywords: phosphotransferase, riboflavin kinase
  
• 2pi6.pdb. signaling protein 13-apr-07 2pi6
  Title: crystal structure of the sheep signalling glycoprotein (sps- 40) complex with 2-methyl-2-4-pentanediol at 1.65a resolution reveals specific binding characteristics of sps- 40
  Author: p. sharma, n. singh, s. sharma, p. kaur, c. betzel, t. p. singh
  Keywords: binding, signaling protein
  
• 2prh.pdb. oxidoreductase 04-may-07 2prh Cl F
  Title: the structures of apo- and inhibitor bound human dihydroorotate dehydrogenase reveal conformational flexibility within the inhibitor binding site
  Author: b. walse, v. t. dufe, s. al-karadaghi
  Keywords: oxidoreductase
  
• 2prl.pdb. oxidoreductase 04-may-07 2prl
  Title: the structures of apo- and inhibitor bound human dihydroorotate dehydrogenase reveal conformational flexibility within the inhibitor binding site
  Author: b. walse, v. t. dufe, s. al-karadaghi
  Keywords: oxidoreductase
  
• 2prm.pdb. oxidoreductase 04-may-07 2prm
  Title: the structures of apo- and inhibitor bound human dihydroorotate dehydrogenase reveal conformational flexibility within the inhibitor binding site
  Author: b. walse, v. t. dufe, s. al-karadaghi
  Keywords: oxidoreductase
  
• 2q0i.pdb. metal binding protein 22-may-07 2q0i Fe
  Title: structure of pseudomonas quinolone signal response protein pqse
  Author: s. yu, v. jensen, i. feldmann, s. haussler, w. blankenfeldt
  Keywords: pseudomonas quinolone signal, pqs, metall- beta-lactamase, iron, phosphodiesterase, metal binding protein
  
• 2q0j.pdb. metal binding protein 22-may-07 2q0j Fe
  Title: structure of pseudomonas quinolone signal response protein pqse
  Author: s. yu, v. jensen, i. feldmann, s. haussler, w. blankenfeldt
  Keywords: pseudomonas quinolone signal, pqs, metall- beta-lactamase, iron, phosphodiesterase, metal binding protein
  
• 2q1k.pdb. chaperone 24-may-07 2q1k Se
  Title: cyrstal structure of asce from aeromonas hydrophilla
  Author: y. k. mok, j. sivaraman, y. w. tan, h. b. yu, k. y. leung
  Keywords: chaperone, ttss
  
• 2q27.pdb. lyase 26-may-07 2q27 Mg
  Title: crystal structure of oxalyl-coa decarboxylase from escherichia coli
  Author: t. werther, a. zimmer, g. wille, g. hubner, m. s. weiss, s. konig
  
  
• 2q28.pdb. lyase 26-may-07 2q28 Mg
  Title: crystal structure of oxalyl-coa decarboxylase from escherichia coli in complex with adenosine-5`-diphosphate
  Author: t. werther, a. zimmer, g. wille, g. hubner, m. s. weiss, s. konig
  
  
• 2q29.pdb. lyase 26-may-07 2q29 Mg
  Title: crystal structure of oxalyl-coa decarboxylase from escherichia coli in complex with acetyl coenzyme a
  Author: t. werther, a. zimmer, g. wille, g. hubner, m. s. weiss, s. konig
  
  
• 2q5g.pdb. transcription 01-jun-07 2q5g F
  Title: ligand binding domain of ppar delta receptor in complex with a partial agonist
  Author: i. pettersson, p. sauerberg, e. johansson, i. hoffman, l. w. tari, hunter m. j. , j. nix
  Keywords: transcription
  
• 2qdi.pdb. transport protein 20-jun-07 2qdi
  Title: drosophila obp lush d118a mutation
  Author: j. d. laughlin, d. n. m. jones
  Keywords: obp, pheromone binding protein, pbp, transport protein
  
• 2qg5.pdb. transferase 28-jun-07 2qg5
  Title: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
  Author: v. v. lunin, a. k. wernimont, j. lew, g. wasney, i. kozieradzki, m. vedadi, a. bochkarev, c. h. arrowsmith, m. sundstrom, j. weigelt, a. e. edwards, r. hui, j. artz, m. amani, structural genomics consortium (sgc)
  Keywords: calcium dependent kinase, sgc, structural genomics consortium, transferase
  
• 2qn1.pdb. transferase, apoptosis 17-jul-07 2qn1
  Title: glycogen phosphorylase b in complex with asiatic acid
  Author: s. e. zographos, d. d. leonidas, k. -m. alexacou, j. hayes, n. g. oikonomakos
  Keywords: type 2 diabetes, transferase, apoptosis
  
• 2qn2.pdb. transferase, apoptosis 17-jul-07 2qn2
  Title: glycogen phosphorylase b in complex with maslinic acid
  Author: s. e. zographos, d. d. leonidas, k. -m. alexacou, j. hayes, n. g. oikonomakos
  Keywords: type 2 diabetes, transferase, apoptosis
  
• 2qp6.pdb. lyase 23-jul-07 2qp6 Hg Cl Zn
  Title: the crystal structure of the complex of hcaii with a bioreductive antitumor derivative
  Author: k. d'ambrosio, g. de simone
  Keywords: lyase
  
• 2qs6.pdb. deoxyribonucleic acid 30-jul-07 2qs6
  Title: structure of a hoogsteen antiparallel duplex with extra- helical thymines
  Author: j. pous, l. urpi, j. a. subirana, c. gouyette, j. navaza, j. l. campos
  Keywords: oligonucleotide, dna, thymines
  
• 2qt5.pdb. peptide binding protein 01-aug-07 2qt5
  Title: crystal structure of grip1 pdz12 in complex with the fras1 peptide
  Author: j. long, z. wei, w. feng, y. zhao, m. zhang
  Keywords: pdz tandem, alternative splicing, cell junction, cytoplasm, endoplasmic reticulum, membrane, postsynaptic cell membrane, synapse, protein binding, peptide binding protein
  
• 2r2d.pdb. hydrolase 24-aug-07 2r2d Zn
  Title: structure of a quorum-quenching lactonase (aiib) from agrobacterium tumefaciens
  Author: d. liu, p. w. thomas, j. momb, q. hoang, g. a. petsko, d. ringe, w. fast
  Keywords: n-acyl hompserine lactone, di-nuclear zinc center, quorum quenching, aiib, phosphate, agrobacterium tumefaciens, hydrolase
  
• 2r2x.pdb. hydrolase 28-aug-07 2r2x
  Title: ricin a-chain (recombinant) complex with urea
  Author: j. h. carra, c. a. mchugh, s. mulligan, l. m. machiesky, a. s. soares, c. b. millard
  Keywords: ricinus communis, n-glycosidase, toxin, glycoprotein, hydrolase, lectin, plant defense, protein synthesis inhibitor
  
• 2r2y.pdb. protein binding 28-aug-07 2r2y
  Title: crystal structure of the proteasomal rpn13 pru-domain
  Author: m. groll, k. walters, i. dikic, d. finley
  Keywords: ubiquitin, ph-domain, 19s regulator, receptor, ubiquitin-proteasome-degradation pathway, receptor domain for ubiquitin and proteasome binding, protein binding
  
• 2r4j.pdb. oxidoreductase 31-aug-07 2r4j Se
  Title: crystal structure of escherichia coli semet substituted glycerol-3-phosphate dehydrogenase in complex with dhap
  Author: j. i. yeh, s. du, u. chinte
  Keywords: cytoplasm, fad, flavoprotein, glycerol metabolism, oxidoreductase
  
• 2r6s.pdb. unknown function 06-sep-07 2r6s Fe
  Title: crystal structure of gab protein
  Author: b. lohkamp, d. dobritzsch
  Keywords: unknown function
  
• 2rb1.pdb. hydrolase 17-sep-07 2rb1
  Title: 2-ethoxyphenol in complex with t4 lysozyme l99a
  Author: a. p. graves, s. e. boyce, b. k. shoichet
  Keywords: hydrolase
  
• 2reh.pdb. oxidoreductase 26-sep-07 2reh
  Title: mechanistic and structural analyses of the roles of arg409 and asp402 in the reaction of the flavoprotein nitroalkane oxidase
  Author: p. f. fitzpatrick, d. m. bozinovski, a. heroux, p. g. shaw, m. p. valley, a. m. orville
  Keywords: flavoenzyme, nitroalkanefad, flavoprotein
  
• 2rf5.pdb. transferase 28-sep-07 2rf5 Zn
  Title: crystal structure of human tankyrase 1- catalytic parp domain
  Author: l. lehtio, t. karlberg, c. h. arrowsmith, h. berglund, r. busam, r. collins, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, m. d. herman, l. holmberg-schiavone, i. johansson, a. kallas, t. kotenyova, m. moche, p. nordlund, t. nyman, c. persson, j. sagemark, m. sundstrom, a. g. thorsell, l. tresaugues, s. van den berg, m. welin, j. weigelt, structural genomics consortium (sgc)
  Keywords: golgi apparatus, membrane, mrna transport, nad, nuclear pore complex, nucleus, phosphorylation, protein transport, telomere, transferase, translocation, transport
  
• 2rh2.pdb. oxidoreductase 05-oct-07 2rh2 He Hg
  Title: high resolution dhfr r-67
  Author: j. m. krahn, r. e. london
  Keywords: plasmid-encoded r67 dhfr, tmp-resistant dhfr, antibiotic resistance, methotrexate resistance, nadp, one-carbon metabolism, oxidoreductase, trimethoprim resistance
  
• 2rhf.pdb. hydrolase 09-oct-07 2rhf Se
  Title: d. radiodurans recq hrdc domain 3
  Author: j. l. keck, m. p. killoran
  Keywords: recq, helicase, d. radiodurans, atp-binding, hydrolase, nucleotide-binding
  
• 2rk1.pdb. oxidoreductase 16-oct-07 2rk1 He Hg
  Title: dhfr r67 complexed with nadp and dihydrofolate
  Author: j. m. krahn, r. e. london
  Keywords: nadp, dihydrofolate, asymmetric ligand binding, antibiotic resistance, methotrexate resistance, one-carbon metabolism, plasmid, trimethoprim resistance
  
• 2rk2.pdb. oxidoreductase 16-oct-07 2rk2
  Title: dhfr r-67 complexed with nadp
  Author: j. m. krahn, r. e. london
  Keywords: nadp, asymmetric ligand binding, antibiotic resistance, methotrexate resistance, one-carbon metabolism, plasmid, trimethoprim resistance
  
• 2rnz.pdb. transferase 01-mar-08 2rnz He Hg (NMR, 20 structures)
  Title: solution structure of the presumed chromodomain of the yeast histone acetyltransferase, esa1
  Author: h. shimojo, n. sano, y. moriwaki, m. okuda, m. horikoshi, y. nishimura
  Keywords: hat, chromodomain, tudor domain, rna binding, activator, chromatin regulator, transcription, transcription regulation, transferase
  
• 2ro0.pdb. transferase 01-mar-08 2ro0 He Hg (NMR, 20 structures)
  Title: solution structure of the knotted tudor domain of the yeast histone acetyltransferase, esa1
  Author: h. shimojo, n. sano, y. moriwaki, m. okuda, m. horikoshi, y. nishimura
  Keywords: hat, chromodomain, tudor domain, rna binding, activator, chromatin regulator, transcription, transcription regulation, transferase
  
• 2uz2.pdb. glycoprotein 24-apr-07 2uz2
  Title: crystal structure of xenavidin
  Author: s. h. helppolainen, j. a. e. maatta, t. t. airenne, m. s. johnson, m. s. kulomaa, h. r. nordlund
  Keywords: beta-barrel, biotin-binding protein, glycoprotein
  
• 2uz4.pdb. transferase 25-apr-07 2uz4
  Title: hhai dna methyltransferase r165n mutant complex with 13mer gcgc-gmgc oligonucleotide and sah
  Author: d. daujotyte, l. leinartaite, s. grazulis
  Keywords: s-adenosyl-l-methionine, transferase, base flipping, methyltransferase, restriction system, dna methyltransferase
  
• 2v0b.pdb. hydrolase 11-may-07 2v0b Se Ca
  Title: sad structure solution porcine pancreatic elastase from a selenate derivative
  Author: j. jakoncic, v. stojanoff
  Keywords: crystallization, hydrolase, substitution, metal-binding, se, sad, calcium, zymogen, protease, selenate
  
• 2v1q.pdb. structural protein 29-may-07 2v1q Cl Pt Na
  Title: atomic-resolution structure of the yeast sla1 sh3 domain 3
  Author: i. kursula, p. kursula, p. zou, f. lehmann, y. h. song, m. wilmanns
  Keywords: phosphorylation, structural protein, yeast, sh3 domain, cytoskeleton, actin-binding
  
• 2v1r.pdb. protein transport 29-may-07 2v1r
  Title: yeast pex13 sh3 domain complexed with a peptide from pex14 at 2.1 a resolution
  Author: i. kursula, p. kursula, f. lehmann, p. zou, y. h. song, m. wilmanns
  Keywords: translocation, transmembrane, peptide complex, protein transport, structural genomics, membrane, transport, sh3 domain, peroxisome
  
• 2vbs.pdb. transferase 16-sep-07 2vbs Cl Zn
  Title: riboflavin kinase mj0056 from methanocaldococcus jannaschii in complex with po4
  Author: m. d. hartmann, s. djuranovic, m. ammelburg, j. martin, a. n. lupas, k. zeth,
  Keywords: cradle-loop barrel, ctp-dependent kinase, transferase
  
• 2vbt.pdb. transferase 16-sep-07 2vbt Na
  Title: riboflavin kinase mj0056 from methanocaldococcus jannaschii in complex with cdp and po4
  Author: m. d. hartmann, m. ammelburg, s. djuranovic, j. martin, a. n. lupas, k. zeth
  Keywords: ctp-dependent kinase, fmn, transferase
  
• 2vbu.pdb. transferase 16-sep-07 2vbu Mg
  Title: riboflavin kinase mj0056 from methanocaldococcus jannaschii in complex with cdp
  Author: m. d. hartmann, m. ammelburg, s. djuranovic, j. martin, a. n. lupas, k. zeth
  Keywords: ctp-dependent kinase, fmn, transferase
  
• 2vbv.pdb. transferase 16-sep-07 2vbv Cl Mg I
  Title: riboflavin kinase mj0056 from methanocaldococcus jannaschii in complex with cdp and fmn
  Author: m. d. hartmann, m. ammelburg, s. djuranovic, j. martin, a. n. lupas, k. zeth
  Keywords: ctp-dependent kinase, fmn, transferase
  
• 2vcy.pdb. oxidoreductase 28-sep-07 2vcy
  Title: crystal structure of 2-enoyl thioester reductase of human fas ii
  Author: a. m. haapalainen, r. pudas, o. s. smart, r. k. wierenga
  Keywords: polymorphism, mitochondrion, oxidoreductase, fatty acid biosynthesis, enoyl thioester reductase, lipid synthesis, transit peptide
  
• 2vns.pdb. oxidoreductase 07-feb-08 2vns
  Title: crystal structure of the membrane proximal oxidoreductase domain of human steap3, the dominant ferric reductase of the erythroid transferrin cycle
  Author: a. k. sendamarai, r. s. ohgami, m. d. fleming, c. m. lawrence
  Keywords: oxidoreductase, steap3, copper, membrane, endosome, apoptosis, tf, nad, tfr, fad, fno, nadp, tfr1, iron, steap, polymorphism, glycoprotein, ion transport, dinucleotide-binding domain
  
• 2vq3.pdb. oxidoreductase 10-mar-08 2vq3
  Title: crystal structure of the membrane proximal oxidoreductase domain of human steap3, the dominant ferric reductase of the erythroid transferrin cycle
  Author: a. k. sendamarai, r. s. ohgami, m. d. fleming, c. m. lawrence
  Keywords: oxidoreductase, steap3, copper, membrane, endosome, apoptosis, tf, nad, tfr, fad, fno, nadp, tfr1, iron, steap, polymorphism, glycoprotein, ion transport, dinucleotide-binding domain
  
• 2vr0.pdb. oxidoreductase 24-mar-08 2vr0 Fe Ca
  Title: crystal structure of cytochrome c nitrite reductase nrfha complex bound to the hqno inhibitor
  Author: m. l. rodrigues, m. archer
  Keywords: oxidoreductase, hqno, nrfh, nrfha, membrane complex
  
• 2vug.pdb. ligase 26-may-08 2vug
  Title: the structure of an archaeal homodimeric rna ligase
  Author: m. a. brooks, l. meslet-cladiere, m. graille, j. kuhn, k. blondeau, h. myllykallio, h. van tilbeurgh
  Keywords: ligase, amppnp, pab1020, pyrococcus abyssi, nucleotidyl- transferase
  
• 2yz7.pdb. oxidoreductase 04-may-07 2yz7 Cl Ca
  Title: x-ray analyses of 3-hydroxybutyrate dehydrogenase from alcaligenes faecalis
  Author: m. m. hoque, e. c. m. juan, s. shimizu, m. t. hossain, a. takenaka
  Keywords: oxidoreductase
  
• 2z1y.pdb. transferase 16-may-07 2z1y
  Title: crystal structure of lysn, alpha-aminoadipate aminotransferase (complexed with n-(5'-phosphopyridoxyl)-l- leucine), from thermus thermophilus hb27
  Author: t. tomita, t. miyazaki, t. miyagawa, s. fushinobu, t. kuzuyama, m. nishiyama
  Keywords: thermus thermophilus, substrate specifity
  
• 2z2t.pdb. viral protein/inhibitor 28-may-07 2z2t
  Title: crystal structure of the complex between gp41 fragment n36 and fusion inhibitor sc34ek
  Author: s. nakamura, t. ohkubo, y. kobayashi
  Keywords: viral protein/inhibitor complex
  
• 2z61.pdb. transferase 21-jul-07 2z61
  Title: crystal structure of mj0684 from methanococcus jannaschii reveals its similarity in the active site to kynurenine aminotransferases
  Author: j. k. yang
  Keywords: kynurenine aminotransferase, mj0684, cytoplasm, pyridoxal phosphate
  
• 2z69.pdb. transcription regulator 24-jul-07 2z69
  Title: crystal structure of the sensor domain of the transcriptional regulator dnr from pseudomonas aeruginosa
  Author: g. giardina, k. a. johnson, a. di matteo
  Keywords: dimerization helix, transcription regulator
  
• 2z98.pdb. oxidoreductase 18-sep-07 2z98
  Title: the crystal structure of azor (azoreductase) from escherichia coli: oxidized azor in tetragonal crystals (the resolution has improved from 1.8 (1v4b) to 1.4 angstrom)
  Author: k. ito
  Keywords: flavoprotein, fmn, nad, oxidoreductase
  
• 2z99.pdb. cell cycle 18-sep-07 2z99
  Title: crystal structure of scpb from mycobacterium tuberculosis
  Author: j. -s. kim, s. lee, b. s. kang, m. h. kim, h. -s. lee, k. j. kim
  Keywords: cell cycle, cell division, chromosome partition, cytoplasm
  
• 2z9b.pdb. oxidoreductase 18-sep-07 2z9b
  Title: the crystal structure of azor (azoreductase) from escherichia coli: reduced azor in tetragonal crystals
  Author: k. ito
  Keywords: flavoprotein, fmn, nad, oxidoreductase
  
• 2z9c.pdb. oxidoreductase 18-sep-07 2z9c
  Title: the crystal structure of azor (azoreductase) from escherichia coli: azor in complex with dicoumarol
  Author: k. ito
  Keywords: flavoprotein, fmn, nad, oxidoreductase
  
• 2z9d.pdb. oxidoreductase 18-sep-07 2z9d
  Title: the crystal structure of azor (azoreductase) from escherichia coli: oxidized azor in orthorhombic crystals
  Author: k. ito
  Keywords: flavoprotein, fmn, nad, oxidoreductase
  
• 2z9t.pdb. immune system 26-sep-07 2z9t
  Title: crystal structure of the human beta-2 microglobulin mutant w60g
  Author: s. ricagno, m. bolognesi, v. bellotti, a. corazza, e. rennella, d. gural, m. c. mimmi, e. betto, c. pucillo, f. fogolari, p. viglino, s. raimondi, s. giorgetti, b. bolognesi, g. merlini, m. stoppini
  Keywords: tryptophan, glycine, amyloidosis, dra, beta fibrils, disease mutation, glycation, glycoprotein, immune response, immunoglobulin domain, mhc i, pyrrolidone carboxylic acid, secreted, immune system
  
• 2z9u.pdb. transferase 26-sep-07 2z9u
  Title: crystal structure of pyridoxamine-pyruvate aminotransferase from mesorhizobium loti at 2.0 a resolution
  Author: y. yoshikane, n. yokochi, m. yamasaki, k. mizutani, k. ohnishi, b. mikami, h. hayashi, t. yagi
  Keywords: pyridoxamine, pyruvate
  
• 2z9v.pdb. transferase 26-sep-07 2z9v
  Title: crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxamine
  Author: y. yoshikane, n. yokochi, m. yamasaki, k. mizutani, k. ohnishi, b. mikami, h. hayashi, t. yagi
  Keywords: pyridoxamine, pyruvate
  
• 2z9w.pdb. transferase 26-sep-07 2z9w
  Title: crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxal
  Author: y. yoshikane, n. yokochi, m. yamasaki, k. mizutani, k. ohnishi, b. mikami, h. hayashi, t. yagi
  Keywords: pyridoxamine, pyruvate, pyridoxal
  
• 2z9x.pdb. transferase 26-sep-07 2z9x Cl
  Title: crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxyl-l-alanine
  Author: y. yoshikane, n. yokochi, m. yamasaki, k. mizutani, k. ohnishi, b. mikami, h. hayashi, t. yagi
  Keywords: pyridoxamine, pyruvate, alanine
  
• 2zaf.pdb. oxidoreductase 05-oct-07 2zaf
  Title: mechanistic and structural analyses of the roles of arg409 and asp402 in the reaction of the flavoprotein nitroalkane oxidase
  Author: p. f. fitzpatrick, d. m. bozinovski, a. heroux, p. g. shaw, m. p. valley, a. m. orville
  Keywords: flavoenzyme, nitroalkane, flavoprotein
  
• 2zay.pdb. regulatory protein 12-oct-07 2zay
  Title: crystal structure of response regulator from desulfuromonas acetoxidans
  Author: a. a. fedorov, e. v. fedorov, a. meyer, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc), new york sgx research center for structural genomics (nysgrc)
  Keywords: nysgxrc, target 11006u, response regulator, psi-2, protein structure initiative, new york sgx research center for structural genomics, regulatory protein, nysgrc
  
• 2zc3.pdb. biosynthetic protein 02-nov-07 2zc3
  Title: penicillin-binding protein 2x (pbp 2x) acyl-enzyme complex (biapenem) from streptococcus pneumoniae
  Author: m. yamada, t. watanabe, y. takeuchi
  Keywords: biosynthetic protein
  
• 2zc4.pdb. biosynthetic protein 02-nov-07 2zc4
  Title: penicillin-binding protein 2x (pbp 2x) acyl-enzyme complex (tebipenem) from streptococcus pneumoniae
  Author: m. yamada, t. watanabe, y. takeuchi
  Keywords: biosynthetic protein
  
• 2zc5.pdb. biosynthetic protein 02-nov-07 2zc5 Zn
  Title: penicillin-binding protein 1a (pbp 1a) acyl-enzyme complex (biapenem) from streptococcus pneumoniae
  Author: m. yamada, t. watanabe, y. takeuchi
  Keywords: cell wall, penicillin-binding, antibiotics, biapenem, antibiotic resistance, cell shape, cell wall biogenesis/degradation, multifunctional enzyme, secreted, biosynthetic protein
  
• 2zc6.pdb. biosynthetic protein 02-nov-07 2zc6 Zn
  Title: penicillin-binding protein 1a (pbp 1a) acyl-enzyme complex (tebipenem) from streptococcus pneumoniae
  Author: m. yamada, t. watanabe, y. takeuchi
  Keywords: cell wall, penicillin-binding, antibiotics, tebipenem, antibiotic resistance, cell shape, cell wall biogenesis/degradation, multifunctional enzyme, secreted, biosynthetic protein
  
• 2zea.pdb. oxidoreductase 07-dec-07 2zea Cl Ca
  Title: crystal structure of alcaligenes faecalis d-3- hydroxybutyrate dehydrogenase in complex with nad+ and acetate
  Author: m. m. hoque, s. shimizu, m. t. hossain, t. yamamoto, k. suzuki, a. takenaka
  Keywords: hydroxybutyrate dehydrogenase, ketone bodies, oxidoreductase
  
• 2zjd.pdb. apoptosis inhibitor/apoptosis 05-mar-08 2zjd
  Title: crystal structure of lc3-p62 complex
  Author: y. ichimura, t. kumanomidou, y. sou, t. mizushima, j. ezaki, t. ueno, e. kominami, t. yamane, k. tanaka, m. komatsu
  Keywords: endosome, immune response, metal-binding, nucleus, phosphoprotein, zinc, zinc-finger, apoptosis inhibitor/apoptosis complex
  
• 2zle.pdb. hydrolase 09-apr-08 2zle (cryo-electron microscopy)
  Title: cryo-em structure of degp12/omp
  Author: e. schaefer, h. r. saibil
  Keywords: htra, protease, chaperone, pdz, outer membrane protein, omp, periplasm, hydrolase, serine protease, stress response, ion transport, phage recognition, porin, transmembrane, transport
  
• 3b5j.pdb. transport protein 26-oct-07 3b5j
  Title: crystal structures of the s504a mutant of an isolated abc- atpase in complex with tnp-adp
  Author: c. oswald, s. jenewein, s. h. j. smits, i. b. holland, l. schmitt
  Keywords: nucleotide-binding doamin, atpase, atp- binding, hydrolase, inner membrane, membrane, plasmid, transmembrane, transport protein
  
• 3bd3.pdb. immune system 14-nov-07 3bd3
  Title: crystal structure of single domain vl of an anti-dna binding antibody 3d8 scfv and its active site revealed by complex structures of a small molecule and metals
  Author: s. k. park, j. s. kim
  Keywords: catalytic antibody, anti-dna, immune system
  
• 3bd4.pdb. immune system 14-nov-07 3bd4 Cd
  Title: crystal structure of single domain vl of an anti-dna binding antibody 3d8 scfv and its active site revealed by complex structures of a small molecule and metals
  Author: s. k. park, j. s. kim
  Keywords: metal, immune system
  
• 3bd5.pdb. immune system 14-nov-07 3bd5 Co
  Title: crystal structure of single domain vl of an anti-dna binding antibody 3d8 scfv and its active site revealed by complex structures of a small molecule and metals
  Author: s. k. park, j. s. kim
  Keywords: metal complex, immune system
  
• 3bgo.pdb. hydrolase 27-nov-07 3bgo Zn
  Title: azide complex of engineered subtilisin subt_bacam
  Author: d. t. gallagher, p. n. bryan
  Keywords: anion sensor, calcium, hydrolase, metal- binding, protease, secreted, serine protease, sporulation, zymogen
  
• 3bl5.pdb. hydrolase 10-dec-07 3bl5 Mg Zn
  Title: crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis
  Author: n. cicmil, r. h. huang
  Keywords: rna modification, trna, hydrolase, queuosine biosynthesis
  
• 3bm4.pdb. hydrolase 12-dec-07 3bm4 Mg
  Title: crystal structure of human adp-ribose pyrophosphatase nudt5 in complex with magnesium and ampcpr
  Author: m. zha, q. guo, y. zhang, c. zhong, y. ou, j. ding
  Keywords: adpr, adp-ribose pyrophosphatase, nudt5, molecular mechanism, substrate specificity, hydrolase, magnesium, phosphoprotein, polymorphism
  
• 3bq4.pdb. viral protein 19-dec-07 3bq4
  Title: crystal structure of ad35 fiber knob
  Author: l. pache, s. venkataraman, g. r. nemerow, v. s. reddy
  Keywords: fiber knob, trimer
  
• 3brd.pdb. dna binding protein/dna 21-dec-07 3brd
  Title: csl (lag-1) bound to dna with lin-12 ram peptide, p212121
  Author: j. j. wilson, r. a. kovall
  Keywords: signaling, transcription, notch, dna- binding, ank repeat, developmental protein, differentiation, egf-like domain, glycoprotein, membrane, transmembrane, dna binding protein/dna complex
  
• 3brf.pdb. dna binding protein/dna 21-dec-07 3brf
  Title: csl (lag-1) bound to dna with lin-12 ram peptide, c2221
  Author: j. j. wilson, r. a. kovall
  Keywords: signaling, transcription, notch, dna- binding, ank repeat, developmental protein, differentiation, egf-like domain, glycoprotein, membrane, transmembrane, dna binding protein/dna complex
  
• 3brg.pdb. dna binding protein/dna 21-dec-07 3brg
  Title: csl (rbp-jk) bound to dna
  Author: d. r. friedmann, r. a. kovall
  Keywords: signaling, transcription, notch, activator, alternative splicing, dna-binding, notch signaling pathway, nucleus, repressor, transcription regulation, dna binding protein/dna complex
  
• 3brm.pdb. hydrolase 21-dec-07 3brm Se
  Title: crystal structure of the covalent complex between the bacillus subtilis glutaminase ybgj and 5-oxo-l-norleucine formed by reaction of the protein with 6-diazo-5-oxo-l- norleucine
  Author: a. u. singer, y. kim, i. dementieva, e. vinokour, a. joachimiak, a. savchenko, a. yakunin
  Keywords: ybas glutaminase, don, hydrolase
  
• 3bwm.pdb. transferase 09-jan-08 3bwm Mg K
  Title: crystal structure of human catechol o-methyltransferase with bound sam and dnc
  Author: k. rutherford, i. le trong, r. e. stenkamp, w. w. parson
  Keywords: transferase, transmembrane
  
• 3bwy.pdb. transferase 10-jan-08 3bwy Mg
  Title: crystal structure of human 108m catechol o- methyltransferase bound with s-adenosylmethionine and inhibitor dinitrocatechol
  Author: k. rutherford, i. le trong, r. e. stenkamp, w. w. parson
  Keywords: methyltransferase, polymorphism, rossmann fold, sam, dnc
  
• 3c1v.pdb. calcium binding protein 24-jan-08 3c1v Ca
  Title: the 1.5 a crystal structure of ca2+-bound s100a4
  Author: a. r. gingras, i. l. barsukov
  Keywords: ca2+-bound, calcium-bound, calcium binding protein
  
• 3c2j.pdb. deoxyribonucleic acid 25-jan-08 3c2j
  Title: crystal structure analysis of trioxacarcin a covalently bound to d(aaccggtt)
  Author: r. pfoh, g. m. sheldrick
  Keywords: base flipping, b-dna
  
• 3c6w.pdb. metal binding protein 05-feb-08 3c6w Zn
  Title: phd finger of ing5 bound to an h3k4me3 peptide
  Author: k. s. champagne, p. v. pena, k. johnson, t. g. kutateladze
  Keywords: phd, ing, epigenetics, histone, alternative splicing, metal-binding, phosphoprotein, zinc, zinc-finger, metal binding protein
  
• 3c6x.pdb. lyase 06-feb-08 3c6x He Hg
  Title: hnl from hevea brasiliensis to atomic resolution
  Author: a. schmidt
  Keywords: hydroxynitril lyase, catalysis, protonation state, ab initio calculations, substrate binding
  
• 3c6y.pdb. lyase 06-feb-08 3c6y He Hg
  Title: hnl from hevea brasiliensis to atomic resolution
  Author: a. schmidt
  Keywords: hydroxynitril lyase, catalysis, protonation state, ab initio calculations, substrate binding
  
• 3c6z.pdb. lyase 06-feb-08 3c6z He Hg
  Title: hnl from hevea brasiliensis to atomic resolution
  Author: a. schmidt
  Keywords: hydroxynitril lyase, catalysis, protonation state, ab initio calculations, substrate binding
  
• 3c70.pdb. lyase 06-feb-08 3c70 He Hg
  Title: hnl from hevea brasiliensis to atomic resolution
  Author: a. schmidt
  Keywords: hydroxynitril lyase, catalysis, protonation state, ab initio calculations, substrate binding
  
• 3c7b.pdb. oxidoreductase 07-feb-08 3c7b Fe
  Title: structure of the dissimilatory sulfite reductase from archaeoglobus fulgidus
  Author: a. schiffer, k. parey, e. warkentin, k. diederichs, p. m. h. kroneck, u. ermler
  Keywords: 4fe-4s, heme, iron, iron-sulfur, membrane, metal-binding, oxidoreductase
  
• 3cc2.pdb. ribosome 23-feb-08 3cc2 Cl Mg K Na Cd
  Title: the refined crystal structure of the haloarcula marismortui large ribosomal subunit at 2.4 angstrom resolution with rrna sequence for the 23s rrna and genome-derived sequences for r-proteins
  Author: g. gurel, g. blaha
  Keywords: ribonucleoprotein, ribosomal protein, rna-binding, rrna-binding, trna-binding, metal-binding, zinc, zinc-finger, acetylation, ribosome
  
• 3cc4.pdb. ribosome 24-feb-08 3cc4 Cl Sr Mg K Na Cd
  Title: co-crystal structure of anisomycin bound to the 50s ribosomal subunit
  Author: g. blaha, g. gurel
  Keywords: large ribosomal subunit, haloarcula marismortui, co-crystal, anisomycin, ribosome
  
• 3cc7.pdb. ribosome 25-feb-08 3cc7 Cl Sr Mg K Na Cd
  Title: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation c2487u
  Author: g. blaha, g. gurel
  Keywords: c2487u, large ribosomal subunit, 23s rrna, ribonucleoprotein, ribosomal protein, rna-binding, rrna-binding, trna-binding, metal-binding, zinc, zinc- finger, acetylation, ribosome
  
• 3cce.pdb. ribosome 25-feb-08 3cce Cl Sr Mg K Na Cd
  Title: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation u2535a
  Author: g. blaha, g. gurel
  Keywords: ribosome
  
• 3ccj.pdb. ribosome 26-feb-08 3ccj Cl Sr Mg K Na Cd
  Title: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation c2534u
  Author: g. blaha, g. gurel
  Keywords: 23s rrna, large ribosomal subunit, ribosome
  
• 3ccl.pdb. ribosome 26-feb-08 3ccl Cl Sr Mg K Na Cd
  Title: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation u2535c. density for anisomycin is visible but not included in model.
  Author: g. blaha, g. gurel
  Keywords: 23s rrna, large ribosomal subunit, ribosome
  
• 3ccm.pdb. ribosome 26-feb-08 3ccm Cl Sr Mg K Na Cd
  Title: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation g2611u
  Author: g. blaha, g. gurel
  Keywords: 23s rrna, large ribosomal subunit, ribosome
  
• 3ccq.pdb. ribosome 26-feb-08 3ccq Cl Sr Mg K Na Cd
  Title: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation a2488u
  Author: g. blaha, g. gurel
  Keywords: ribosome
  
• 3ccr.pdb. ribosome 26-feb-08 3ccr Cl Sr Mg K Na Cd
  Title: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation a2488c. density for anisomycin is visible but not included in the model.
  Author: g. blaha, g. gurel
  Keywords: 23s rrna, large ribosomal subunit, ribosome
  
• 3ccs.pdb. ribosome 26-feb-08 3ccs Cl Sr Mg K Na Cd
  Title: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation g2482a
  Author: g. blaha, g. gurel
  Keywords: 23s rrna, large ribosomal subunit, ribosome
  
• 3ccu.pdb. ribosome 26-feb-08 3ccu Cl Sr Mg K Na Cd
  Title: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation g2482c
  Author: g. blaha, g. gurel
  Keywords: 23s rrna, large ribosomal subunit, ribosome
  
• 3ccv.pdb. ribosome 26-feb-08 3ccv Cl Sr Mg K Na Cd
  Title: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation g2616a
  Author: g. blaha, g. gurel
  Keywords: 23s rrna, large ribosomal subunit, ribosome
  
• 3cd6.pdb. ribosome 26-feb-08 3cd6 Cl Sr Mg K Na Cd
  Title: co-cystal of large ribosomal subunit mutant g2616a with cc- puromycin
  Author: g. blaha, g. gurel
  Keywords: 23s rrna, large ribosomal subunit, cc- puromycin, ribosome
  
• 3ceh.pdb. transferase 29-feb-08 3ceh Cl F
  Title: human liver glycogen phosphorylase (tense state) in complex with the allosteric inhibitor ave5688
  Author: k. u. wendt, m. k. dreyer, o. anderka, t. klabunde, p. loenze, e. defossa, d. schmoll
  Keywords: phosphoprotein, polymorphism, pyridoxal phosphate, transferase
  
• 3cej.pdb. transferase 29-feb-08 3cej Cl F
  Title: human glycogen phosphorylase (tense state) in complex with the allosteric inhibitor ave2865
  Author: k. u. wendt, m. k. dreyer, o. anderka, t. klabunde, p. loenze, e. defossa, d. schmoll
  Keywords: phosphoprotein, polymorphism, pyridoxal phosphate
  
• 3cem.pdb. transferase 29-feb-08 3cem Cl F
  Title: human glycogen phosphorylase (tense state) in complex with the allosteric inhibitor ave9423
  Author: k. u. wendt, m. k. dreyer, o. anderka, t. klabunde, p. loenze, e. defossa, d. schmoll
  Keywords: phosphoprotein, polymorphism, pyridoxal phosphate
  
• 3cgf.pdb. transferase 05-mar-08 3cgf
  Title: irak-4 inhibitors (part ii)- a structure based assessment of imidazo[1,2 a]pyridine binding
  Author: t. a. ceska, a. platt, m. fortunato, k. m. dickson, g. buckley
  Keywords: alternative splicing, atp- binding, chromosomal rearrangement, cytoplasm, epilepsy, nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase
  
• 3cgo.pdb. transferase 06-mar-08 3cgo
  Title: irak-4 inhibitors (part ii)- a structure based assessment of imidazo[1,2 a]pyridine binding
  Author: t. a. ceska, a. platt, m. fortunato, k. m. dickson, r. beevers
  Keywords: inhibitor, alternative splicing, atp-binding, chromosomal rearrangement, cytoplasm, epilepsy, nucleotide- binding, phosphoprotein, serine/threonine-protein kinase, transferase
  
• 3cio.pdb. signaling protein, transferase 11-mar-08 3cio Cl
  Title: the kinase domain of escherichia coli tyrosine kinase etk
  Author: d. c. lee, j. zheng, z. jia
  Keywords: wzc, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane, phosphoprotein, transmembrane, tyrosine-protein kinase
  
• 3ckp.pdb. hydrolase 16-mar-08 3ckp Cl
  Title: crystal structure of bace-1 in complex with inhibitor
  Author: k. min
  Keywords: aspartyl protease, alternative splicing, glycoprotein, hydrolase, membrane, transmembrane, zymogen
  
• 3ckr.pdb. hydrolase 16-mar-08 3ckr
  Title: crystal structure of bace-1 in complex with inhibitor
  Author: k. min
  Keywords: aspartyl protease, alternative splicing, glycoprotein, hydrolase, membrane, transmembrane, zymogen
  
• 3cl4.pdb. hydrolase 18-mar-08 3cl4 K
  Title: crystal structure of bovine coronavirus hemagglutinin- esterase
  Author: q. h. zeng, m. a. langereis, a. l. w. van vliet, e. g. huizinga, r. j. de groot
  Keywords: swiss roll, envelope protein, glycoprotein, hemagglutinin, membrane, transmembrane, virion
  
• 3cl5.pdb. hydrolase 18-mar-08 3cl5 K
  Title: structure of coronavirus hemagglutinin-esterase in complex with 4,9-o-diacetyl sialic acid
  Author: q. h. zeng, m. a. langereis, a. l. w. van vliet, e. g. huizinga, r. j. de groot
  Keywords: swiss roll, envelope protein, glycoprotein, hemagglutinin, membrane, transmembrane, virion
  
• 3coc.pdb. proton transport 27-mar-08 3coc
  Title: crystal structure of d115a mutant of bacteriorhodopsin
  Author: n. h. joh, s. faham, j. u. bowie
  Keywords: transmembrane, transport, proton transport
  
• 3cod.pdb. proton transport 27-mar-08 3cod
  Title: crystal structure of t90a/d115a mutant of bacteriorhodopsin
  Author: n. h. joh, a. min, s. faham, j. u. bowie
  Keywords: transmembrane, transport, proton transport
  
• 3cs8.pdb. nuclear protein 09-apr-08 3cs8
  Title: structural and biochemical basis for the binding selectivity of pparg to pgc-1a
  Author: y. li, d. martynowski
  Keywords: zinc-finger, rna-binding, nuclear protein
  
• 3cyk.pdb. thyroid hormone binding protein 25-apr-08 3cyk Zn
  Title: crystal structure of the f87m/l110m mutant of human transthyretin at ph 4.6.
  Author: l. c. palmieri, j. b. b. freire, d. foguel, l. m. t. r. lima
  Keywords: monomer, amyloidogenic intermediate, acidic ph, thyroid hormone binding protein
  
• 3d17.pdb. oxygen binding 05-may-08 3d17 Fe
  Title: a triply ligated crystal structure of relaxed state human hemoglobin
  Author: m. k. safo, f. n. musayev, j. jenkins, d. j. abraham
  Keywords: pyruvate, s- nitrosylation, vasoactive, oxygen binding
  
• 3d1x.pdb. hydrolase 06-may-08 3d1x Cl
  Title: crystal structure of hiv-1 mutant i54m and inhibitor saquinavir
  Author: f. liu, i. t. weber
  Keywords: rna-directed dna polymerase, transferase, viral nucleoprotein, virion, zinc, zinc-finger
  
• 3d2a.pdb. hydrolase 08-may-08 3d2a
  Title: structure of 1-17a4, a thermostable mutant of bacillus subtilis lipase obtained through directed evolution
  Author: r. sankaranarayanan, m. z. kamal
  Keywords: alpha/beta hydrolase, stability, directed evolution, hydrolase, lipid degradation, secreted
  
• 3d2b.pdb. hydrolase 08-may-08 3d2b
  Title: structure of 2d9, a thermostable mutant of bacillus subtilis lipase obtained through directed evolution
  Author: r. sankaranarayanan, m. z. kamal
  Keywords: alpha/beta hydrolase, stability, directed evolution, hydrolase, lipid degradation, secreted
  
• 3d2c.pdb. hydrolase 08-may-08 3d2c
  Title: structure of 4d3, a thermostable mutant of bacillus subtilis lipase obtained through directed evolution
  Author: r. sankaranarayanan, m. z. kamal
  Keywords: alpha/beta hydrolase, stability, directed evolution, hydrolase, lipid degradation, secreted
  
• 3d3i.pdb. hydrolase 12-may-08 3d3i Ca Se
  Title: crystal structural of escherichia coli k12 ygjk, a glucosidase belonging to glycoside hydrolase family 63
  Author: y. kurakata, a. uechi, h. yoshida, s. kamitori, y. sakano, a. nishikawa, t. tonozuka
  Keywords: processing alpha-glucosidase, alpha/alpha barrel, hydrolase
  
• 3d46.pdb. lyase 14-may-08 3d46 Mg
  Title: crystal structure of l-rhamnonate dehydratase from salmonella typhimurium complexed with mg and l-tartrate
  Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: nysgxrc, target 9265a, l-rhamnonate dehydratase, psi-2, protein structure initiative, new york structural genomix research consortium, lyase
  
• 3d47.pdb. lyase 14-may-08 3d47 Mg
  Title: crystal structure of l-rhamnonate dehydratase from salmonella typhimurium complexed with mg and d-malate
  Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: nysgxrc, l-rhamnonate dehydratase, target 9265a, psi-2, protein structure initiative, new york structural genomix research consortium, lyase
  
• 3d48.pdb. hormone/hormone receptor 14-may-08 3d48
  Title: crystal structure of a prolactin receptor antagonist bound to the extracellular domain of the prolactin receptor
  Author: l. a. svensson, j. breinholt
  Keywords: four-helix bundle, glycoprotein, hormone, lactation, secreted, alternative splicing, membrane, receptor, transmembrane, hormone/hormone receptor complex
  
• 3d5f.pdb. transcription 16-may-08 3d5f
  Title: crystal structure of ppar-delta complex
  Author: y. amano
  Keywords: activator, alternative splicing, dna- binding, metal-binding, nucleus, transcription, transcription regulation, zinc, zinc-finger
  
• 3d5t.pdb. oxidoreductase 16-may-08 3d5t Mg Na
  Title: crystal structure of malate dehydrogenase from burkholderia pseudomallei
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: structural genomics, niaid, decode biostructures, malate dehydrogenase, nad, oxidoreductase, tricarboxylic acid cycle, seattle structural genomics center for infectious disease
  
• 3d64.pdb. hydrolase 18-may-08 3d64
  Title: crystal structure of s-adenosyl-l-homocysteine hydrolase from burkholderia pseudomallei
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: ssgcid, s-adenosyl-l-homocysteine hydrolase, cytoplasm, nad, one-carbon metabolism, seattle structural genomics center for infectious disease
  
• 3d6b.pdb. oxidoreductase 19-may-08 3d6b
  Title: 2.2 a crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: pseudomallei, glutaryl-coa, dehydrogenase, seattle structural genomics center for infectious disease, ssgcid, fad, flavoprotein, oxidoreductase