Recent PDB releases or updates: week of 30 May 2008

• 1iz7.pdb. hydrolase 30-sep-02 1iz7 Cl Ca
  Title: re-refinement of the structure of hydrolytic haloalkane dehalogenase linb from sphingomonas paucimobilis ut26 at 1.6 a resolution
  Author: v. a. streltsov
  Keywords: lindane, biodegradation, alpha/beta-hydrolase
  
• 1iz8.pdb. hydrolase 30-sep-02 1iz8 Br Ca
  Title: re-refinement of the structure of hydrolytic haloalkane dehalogenase linb from sphingomonas paucimobilis ut26 with 1,3-propanediol, a product of debromidation of dibrompropane, at 2.0a resolution
  Author: v. a. streltsov
  Keywords: lindane, biodegradation, alpha/beta-hydrolase
  
• 1l7y.pdb. structural genomics, unknown function 18-mar-02 1l7y He Hg (NMR, 24 structures)
  Title: solution nmr structure of c. elegans protein zk652.3. northeast structural genomics consortium target wr41.
  Author: j. r. cort, y. chiang, d. zheng, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
  Keywords: psi, protein structure initiative, structural genomics, unknown function
  
• 1wso.pdb. neuropeptide 08-nov-04 1wso He Hg (NMR, 30 structures)
  Title: the solution structures of human orexin-a
  Author: t. ikegami, t. takai
  Keywords: orexin, gpcr, orphan g-protein coupled receptor, narcolepsy, neuropeptide
  
• 1wyc.pdb. hydrolase 09-feb-05 1wyc
  Title: structure of 6-aminohexanoate-dimer hydrolase, dn mutant
  Author: s. negoro, t. ohki, n. shibata, n. mizuno, y. wakitani, j. tsurukame, k. matsumoto, i. kawamoto, m. takeo, y. higuchi
  
  
• 1x01.pdb. ligase 11-mar-05 1x01
  Title: crystal structure of biotin protein ligase from pyrococcus horikoshii ot3 in complex with atp
  Author: b. bagautdinov, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dimer, atp, x-ray diffraction, structural genomics, riken structural genomics/proteomics initiative, rsgi, nppsfa, national project on protein structural and functional analyses
  
• 1x26.pdb. deoxyribonucleic acid 20-apr-05 1x26 Ho (NMR, 30 structures)
  Title: solution structure of the aa-mismatch dna complexed with naphthyridine-azaquinolone
  Author: k. nakatani, s. hagihara, y. goto, a. kobori, m. hagihara, g. hayashi, m. kyo, m. nomura, m. mishima, c. kojima
  Keywords: aa mismatch, drug
  
• 1ycy.pdb. structural genomics, unknown function 23-dec-04 1ycy Se
  Title: conserved hypothetical protein pfu-1806301-001 from pyrococcus furiosus
  Author: l. huang, z. -j. liu, d. lee, w. tempel, j. chang, m. zhao, j. habel, h. xu, l. chen, d. nguyen, s. -h. chang, p. horanyi, q. florence, w. zhou, d. lin, h. zhang, j. praissman, f. e. jenney jr. , m. w. w. adams, j. p. rose, b. -c. wang, southeast collaboratory for structural genomics (secsg)
  Keywords: structural genomics, unknown function
  
• 2akq.pdb. transport protein 03-aug-05 2akq
  Title: the structure of bovine b-lactoglobulin a in crystals grown at very low ionic strength
  Author: j. j. adams, b. f. anderson, g. e. norris, l. k. creamer, g. b. jameson
  Keywords: x-ray, crystal lattice, low ionic strength, pseudo-merohedral twinning, transport protein
  
• 2atg.pdb. antiviral protein 24-aug-05 2atg Hg (NMR, 20 structures)
  Title: nmr structure of retrocyclin-2 in sds
  Author: n. l. daly, y. k. chen, k. j. rosengren, u. c. marx, m. l. phillips, a. j. waring, w. wang, r. i. lehrer, d. j. craik
  Keywords: circular peptide, laddered disulfide connectivity, antiviral protein
  
• 2d5d.pdb. lipid binding protein,transferase 01-nov-05 2d5d
  Title: structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form ii
  Author: b. bagautdinov, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: lipid binding protein, transferase
  
• 2dcf.pdb. hydrolase 06-jan-06 2dcf
  Title: crystal structure of 6-aminohexanoate-dimer hydrolase s112a/g181d/h266n mutant with substrate
  Author: t. ohki, n. shibata, y. higuchi, m. takeo, s. negoro
  
  
• 2dqg.pdb. immune system/hydrolase 25-may-06 2dqg
  Title: crystal structure of hyhel-10 fv mutant (hy53f) complexed with hen egg lysozyme
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: mutant, immune system/hydrolase complex
  
• 2dqh.pdb. immune system/hydrolase 26-may-06 2dqh
  Title: crystal structure of hyhel-10 fv mutant (hy58a) complexed with hen egg lysozyme
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: mutant, immune system/hydrolase complex
  
• 2dqi.pdb. immune system/hydrolase 26-may-06 2dqi
  Title: crystal structure of hyhel-10 fv mutant (ly50a) complexed with hen egg lysozyme
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: mutant, immune system/hydrolase complex
  
• 2dqj.pdb. immune system/hydrolase 26-may-06 2dqj
  Title: crystal structure of hyhel-10 fv (wild-type) complexed with hen egg lysozyme at 1.8a resolution
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: immune system/hydrolase complex
  
• 2dxu.pdb. ligase 30-aug-06 2dxu
  Title: crystal structure of biotin protein ligase from pyrococcus horikoshii complexed with biotinyl-5'-amp, mutation r48a
  Author: b. bagautdinov, m. taketa, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dimer, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, ligase
  
• 2dzc.pdb. ligase 27-sep-06 2dzc
  Title: crystal structure of biotin protein ligase from pyrococcus horikoshii, mutation r48a
  Author: b. bagautdinov, m. taketa, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dimer, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, ligase
  
• 2e2g.pdb. oxidoreductase 13-nov-06 2e2g
  Title: crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from aeropyrum pernix k1 (pre-oxidation form)
  Author: t. nakamura, t. yamamoto, m. abe, h. matsumura, y. hagihara, t. goto, t. yamaguchi, t. inoue
  Keywords: cysteine sulfenic acid, cysteine sulfinic acid, cysteine sulfonic acid, hypervalent sulfur compound, peroxidatic cysteine, oxidoreductase
  
• 2e2m.pdb. oxidoreductase 14-nov-06 2e2m
  Title: crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from aeropyrum pernix k1 (sulfinic acid form)
  Author: t. nakamura, t. yamamoto, m. abe, h. matsumura, y. hagihara, t. goto, t. yamaguchi, t. inoue
  Keywords: cysteine sulfinic acid, cysteine sulfonic acid, hypervalent sulfur compound, peroxidatic cysteine, oxidoreductase
  
• 2e41.pdb. ligase 01-dec-06 2e41
  Title: crystal structure of biotin protein ligase from pyrococcus horikoshii complexed with the reaction product analog biotinol-5'-amp, mutations r48a and k111a
  Author: b. bagautdinov, y. matsuura, s. bagautdinova, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dimer, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, ligase
  
• 2e64.pdb. ligase 25-dec-06 2e64
  Title: crystal structure of biotin protein ligase from pyrococcus horikoshii, mutations r48a and k111a
  Author: b. bagautdinov, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dimer, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, ligase
  
• 2ejf.pdb. ligase 16-mar-07 2ejf
  Title: crystal structure of the biotin protein ligase (mutations r48a and k111a) and biotin carboxyl carrier protein complex from pyrococcus horikoshii ot3
  Author: b. bagautdinov, y. matsuura, s. bagautdinova, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dimer, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, ligase
  
• 2ejg.pdb. ligase 16-mar-07 2ejg
  Title: crystal structure of the biotin protein ligase (mutation r48a) and biotin carboxyl carrier protein complex from pyrococcus horikoshii ot3
  Author: b. bagautdinov, y. matsuura, s. bagautdinova, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dimer, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, ligase
  
• 2ev1.pdb. lyase 30-oct-05 2ev1
  Title: structure of rv1264n, the regulatory domain of the mycobacterial adenylyl cylcase rv1264, at ph 6.0
  Author: f. findeisen
  Keywords: regulatory domain of adenylyl cyclase, oleic acid, lyase
  
• 2ev2.pdb. lyase 30-oct-05 2ev2
  Title: structure of rv1264n, the regulatory domain of the mycobacterial adenylyl cylcase rv1264, at ph 8.5
  Author: f. findeisen
  Keywords: regulatory domain of adenylyl cyclase, lyase
  
• 2ev3.pdb. lyase 30-oct-05 2ev3
  Title: structure of rv1264n, the regulatory domain of the mycobacterial adenylyl cylcase rv1264, at ph 5.3
  Author: f. findeisen
  Keywords: regulatory domain of adenylyl cyclase, lyase
  
• 2ev4.pdb. lyase 30-oct-05 2ev4 Cl
  Title: structure of rv1264n, the regulatory domain of the mycobacterial adenylyl cylcase rv1264, with a salt precipitant
  Author: f. findeisen
  Keywords: regulatory domain of adenylyl cyclase, oleic acid, lyase
  
• 2evb.pdb. lipid binding protein,transferase 31-oct-05 2evb
  Title: structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form i
  Author: b. bagautdinov, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: lipid binding protein, transferase
  
• 2i7u.pdb. de novo protein/ligand binding protein 31-aug-06 2i7u (NMR, 10 structures)
  Title: structural and dynamical analysis of a four-alpha-helix bundle with designed anesthetic binding pockets
  Author: d. ma, n. r. brandon, t. cui, v. bondarenko, c. canlas, j. s. johansson, p. tang, y. xu
  Keywords: homo dimer, four-alpha-helix bundle, anesthetic binding, de novo protein/ligand binding protein complex
  
• 2jid.pdb. hydrolase 28-feb-07 2jid
  Title: human dipeptidyl peptidase iv in complex with 1-(3,4- dimethoxy-phenyl)-3-m-tolyl-piperidine-4-ylamine
  Author: m. hennig, m. stihle, t. luebbers, r. thoma
  Keywords: dipeptidyl peptidase, protease, membrane, hydrolase, b-propeller, structure based design, glycoprotein, signal-anchor, transmembrane, hydrolase fold, aminopeptidase, serine protease
  
• 2jji.pdb. hydrolase inhibitor 09-apr-08 2jji F
  Title: endothiapepsin in complex with a gem-diol inhibitor.
  Author: l. coates, h-. f. tuan, s. j. tomanicek, a. kovalevsky, m. mustyakimov, p. erskine, j. cooper
  Keywords: acid proteinase, hydrolase/complex, aspartyl protease, zymogen, protease, hydrolase, inhibitor
  
• 2jjj.pdb. hydrolase inhibitor 09-apr-08 2jjj He Hg F
  Title: endothiapepsin in complex with a gem-diol inhibitor.
  Author: l. coates, h-. f. tuan, s. j. tomanicek, a. kovalevsky, m. mustyakimov, p. erskine, j. cooper
  Keywords: hydrolase/complex, aspartyl protease, zymogen, protease, hydrolase inhibitor
  
• 2jr3.pdb. antimicrobial protein 20-jun-07 2jr3 Hg (NMR, 20 structures)
  Title: antibacterial peptide from eggshell matrix: structure and self-assembly of beta-defensin like peptide from the chinese soft-shelled turtle eggshell
  Author: s. vivekanandan, r. lakshminarayanan, s. d. s. jois, r. perumal samy, y. banerjee, e. o. chi-jin, k. w. teo, r. m. kini, s. valiyaveettil
  Keywords: chinese soft-shelled turtle eggshell, antibacterial peptide, eggshell matrix, antimicrobial protein
  
• 2jrc.pdb. hydrolase 22-jun-07 2jrc He Hg (NMR, 40 structures)
  Title: solution structure of peptidyl-trna hydrolase from mycobacterium tuberculosis h37rv.
  Author: s. v. s. r. k. pulavarti, a. jain, p. p. pathak, a. arora
  Keywords: solution structure, nmr, mycobacterium tuberculosis h37rv, hydrolase
  
• 2jst.pdb. de novo protein 12-jul-07 2jst Cl F Br (NMR, 20 structures)
  Title: four-alpha-helix bundle with designed anesthetic binding pockets ii: halothane effects on structure and dynamics
  Author: t. cui, v. bondarenko, d. ma, c. canlas, n. r. brandon, j. s. johansson, p. tang, y. xu
  Keywords: anesthetic binding, alpha helix, homo dimer, de novo protein
  
• 2jt0.pdb. contractile protein regulator 17-jul-07 2jt0 He Hg (NMR, 10 structures)
  Title: solution structure of f104w cardiac troponin c
  Author: x. wang, p. mercier, p. -j. letourneau, b. d. sykes
  Keywords: calcium-bind protein, phe-to-trp mutation, acetylation, muscle protein, polymorphism, contractile protein regulator
  
• 2jv9.pdb. structural protein, protein binding 12-sep-07 2jv9 He Hg (NMR, 30 structures)
  Title: the solution structure of calponin homology domain from smoothelin-like 1
  Author: h. ishida, h. j. vogel, j. a. macdonald
  Keywords: smoothelin, smoothelin-like 1, calponin, calponin homology domain, structural protein, protein binding
  
• 2jxy.pdb. hydrolase 01-dec-07 2jxy He Hg Ca (NMR, 20 structures)
  Title: solution structure of the hemopexin-like domain of mmp12
  Author: i. bertini, v. calderone, m. fragai, r. jaiswal, c. luchinat, m. melikian
  Keywords: calcium, extracellular matrix, glycoprotein, hydrolase, metal-binding, metalloprotease, polymorphism, protease, secreted, zinc, zymogen
  
• 2jyw.pdb. hydrolase 20-dec-07 2jyw He Hg Zn (NMR, 10 structures)
  Title: solution structure of c-terminal domain of apobec3g
  Author: k. chen, e. harjes, p. j. gross, a. fahmy, y. lu, k. shindo, r. s. harris, h. matsuo
  Keywords: zinc, alternative splicing, antiviral defense, cytoplasm, host-virus interaction, hydrolase, metal-binding, nucleus, polymorphism, ubl conjugation
  
• 2k0q.pdb. metal binding protein 12-feb-08 2k0q He Hg (NMR, 20 structures)
  Title: solution structure of copk, a periplasmic protein involved in copper resistance in cupriavidus metallidurans ch34
  Author: b. bersch, a. favier, p. schanda, j. coves, s. van aelst, t. vallaeys, r. wattiez, m. mergeay
  Keywords: heavy metal resistance, open barrel, plasmid- encoded, metal binding protein
  
• 2k2g.pdb. hydrolase 01-apr-08 2k2g He Hg Zn (NMR, 17 structures)
  Title: solution structure of the wild-type catalytic domain of human matrix metalloproteinase 12 (mmp-12) in complex with a tight-binding inhibitor
  Author: m. a. markus, b. dwyer, s. wolfrom, j. li, w. li, k. malakian, j. wilhelm, d. h. h. tsao
  Keywords: secreted, zinc, zymogen
  
• 2k2r.pdb. cell adhesion 10-apr-08 2k2r He Hg (NMR, 20 structures)
  Title: the nmr structure of alpha-parvin ch2/paxillin ld1 complex
  Author: x. wang, k. fukuda, i. byeon, a. velyvis, c. wu, a. gronenborn, j. qin
  Keywords: actin-binding, alternative splicing, cell adhesion, cell junction, cytoplasm, cytoskeleton, lim domain, metal-binding, phosphoprotein, zinc
  
• 2k3s.pdb. protein binding 15-may-08 2k3s He (NMR, 15 structures)
  Title: haddock-derived structure of the ch-domain of the smoothelin-like 1 complexed with the c-domain of apocalmodulin
  Author: h. ishida, m. a. borman, j. ostrander, h. j. vogel, j. a. macdonald
  Keywords: calponin homology domain, smoothelin- like 1, haddock model, ch-domain, coiled coil, acetylation, calcium, methylation, protein binding
  
• 2nvl.pdb. oxidoreductase 13-nov-06 2nvl
  Title: crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from aeropyrum pernix k1 (sulfonic acid form)
  Author: t. nakamura, t. yamamoto, m. abe, h. matsumura, y. hagihara, t. goto, t. yamaguchi, t. inoue
  Keywords: cysteine sulfinic acid, cysteine sulfonic acid, hypervalent sulfur compound, peroxidatic cysteine, oxidoreductase
  
• 2ojp.pdb. lyase 13-jan-07 2ojp
  Title: the crystal structure of a dimeric mutant of dihydrodipicolinate synthase from e.coli- dhdps-l197y
  Author: m. d. w. griffin, r. c. j. dobson, l. antonio, m. a. perugini, g. b. jameson, j. a. gerrard
  Keywords: dhdps, dimer, lysine biosynthesis, lyase
  
• 2oqj.pdb. immune system 31-jan-07 2oqj
  Title: crystal structure analysis of fab 2g12 in complex with peptide 2g12.1
  Author: d. a. calarese, r. l. stanfield, a. menendez, j. k. scott, i. a. wilson
  Keywords: immune system
  
• 2ose.pdb. isomerase 05-feb-07 2ose Cl
  Title: crystal structure of the mimivirus cyclophilin
  Author: e. z. eisenmesser, v. thai, p. renesto, d. raoult
  Keywords: cyclophilin, isomerase
  
• 2osf.pdb. lyase 05-feb-07 2osf Zn
  Title: inhibition of carbonic anhydrase ii by thioxolone: a mechanistic and structural study
  Author: a. b. albert, g. caroli, l. govindasamy, m. agbandje-mckenna, r. mckenna, b. c. tripp
  Keywords: thioxolone, therapeutic ca inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
  
• 2p8d.pdb. deoxyribonucleic acid 22-mar-07 2p8d Co
  Title: the structure of the dickerson sequence with an incorporated cena residue
  Author: k. robeyns, l. van meervelt
  Keywords: sugar modification, dna
  
• 2pi3.pdb. membrane protein 12-apr-07 2pi3
  Title: the crystal structure of ospa mutant
  Author: m. biancalana, k. makabe, v. terechko, s. koide
  Keywords: membrane protein
  
• 2pio.pdb. hormone receptor 13-apr-07 2pio
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: inhibitors coactivator binding af-2 pocket, hormone receptor
  
• 2pip.pdb. hormone receptor 13-apr-07 2pip
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: coactivators, af-2 pocket, inhibitors, hormone receptor
  
• 2piq.pdb. hormone receptor 13-apr-07 2piq
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: inhibitors coactivator binding af-2, hormone receptor
  
• 2pir.pdb. hormone receptor 13-apr-07 2pir
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2pit.pdb. hormone receptor 13-apr-07 2pit I
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2piu.pdb. hormone receptor 13-apr-07 2piu I
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2piv.pdb. hormone receptor 13-apr-07 2piv I
  Title: androgen receptor with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2piw.pdb. hormone receptor 13-apr-07 2piw I
  Title: androgen receptor with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2pix.pdb. hormone receptor 13-apr-07 2pix F
  Title: ar lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2pjp.pdb. translation/rna 16-apr-07 2pjp Cl Mg Na Ca
  Title: structure of the mrna-binding domain of elongation factor selb from e.coli in complex with secis rna
  Author: n. soler, d. fourmy, s. yoshizawa
  Keywords: protein-rna complex, elongation factor, secis, winged- helix, bulge, translation/rna complex
  
• 2pkl.pdb. hormone receptor 17-apr-07 2pkl I
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, k. r. guy, p. webb, r. j. fletterick
  Keywords: hormone receptor
  
• 2plo.pdb. deoxyribonucleic acid 20-apr-07 2plo Na
  Title: d-(gtatacc) low temperature (100k)
  Author: t. prange, m. lecouvey, e. migianu-griffoni
  Keywords: high pressure, low temperature, compressibility, crystals
  
• 2pnz.pdb. hydrolase/hydrolase 25-apr-07 2pnz
  Title: crystal structure of the p. abyssi exosome rnase ph ring complexed with udp and gmp
  Author: m. v. a. s. navarro, b. g. guimaraes
  Keywords: hydrolase/hydrolase complex
  
• 2po0.pdb. hydrolase/hydrolase 25-apr-07 2po0
  Title: crystal structure of the p. abyssi exosome rnase ph ring complexed with adp in double conformation
  Author: m. v. a. s. navarro, b. g. guimaraes
  Keywords: hydrolase/hydrolase complex
  
• 2po1.pdb. hydrolase/hydrolase/rna 25-apr-07 2po1
  Title: crystal structure of the p. abyssi exosome rnase ph ring complexed with a single stranded 10-mer poly(a) rna
  Author: m. v. a. s. navarro, b. g. guimaraes
  Keywords: hydrolase/hydrolase/rna complex
  
• 2po2.pdb. hydrolase/hydrolase 25-apr-07 2po2
  Title: crystal structure of the p. abyssi exosome rnase ph ring complexed with cdp
  Author: m. v. a. s. navarro, b. g. guimaraes
  Keywords: hydrolase/hydrolase complex
  
• 2ppn.pdb. isomerase 30-apr-07 2ppn
  Title: crystal structure of fkbp12
  Author: s. szep, s. park, g. d. vanduyne, j. f. saven
  Keywords: isomerase
  
• 2ppo.pdb. lyase 30-apr-07 2ppo
  Title: crystal structure of e60a mutant of fkbp12
  Author: s. szep, s. park, g. d. vanduyne, j. f. saven
  Keywords: lyase
  
• 2prs.pdb. metal transport 04-may-07 2prs Zn
  Title: structure and metal binding properties of znua, a periplasmic zinc transporter from escherichia coli
  Author: l. a. yatsunyk, l. r. kim, i. i. vorontsov, a. c. rosenzweig
  Keywords: metal transport
  
• 2ps0.pdb. metal transport 04-may-07 2ps0 Zn
  Title: structure and metal binding properties of znua, a periplasmic zinc transporter from escherichia coli
  Author: l. a. yatsunyk, l. r. kim, i. i. vorontsov, a. c. rosenzweig
  Keywords: metal transport
  
• 2ps3.pdb. metal transport 04-may-07 2ps3
  Title: structure and metal binding properties of znua, a periplasmic zinc transporter from escherichia coli
  Author: l. a. yatsunyk, l. r. kim, i. i. vorontsov, a. c. rosenzweig
  Keywords: metal transport
  
• 2ps9.pdb. metal transport 04-may-07 2ps9 Co
  Title: structure and metal binding properties of znua, a periplasmic zinc transporter from escherichia coli
  Author: l. a. yatsunyk, l. r. kim, i. i. vorontsov, a. c. rosenzweig
  Keywords: each domain has (beta/alfa)4 fold with cobalt binding cleft between two domains, metal transport
  
• 2pu2.pdb. hydrolase 08-may-07 2pu2
  Title: ampc beta-lactamase with bound phthalamide inhibitor
  Author: k. babaoglu, b. k. shoichet
  Keywords: hydrolase
  
• 2pu3.pdb. hydrolase 08-may-07 2pu3 Cl Mg
  Title: structural adaptation of endonuclease i from the cold- adapted and halophilic bacterium vibrio salmonicida
  Author: b. altermark, r. helland, e. moe, n. p. willassen, a. o. smalas
  Keywords: salt adaptation, psychrophilic enzymes, endonuclease i, structure, hydrolase
  
• 2pu4.pdb. hydrolase 08-may-07 2pu4
  Title: ampc beta-lacamase with bound covalent oxadiazole inhibitor
  Author: k. babaoglu, b. k. shoichet
  Keywords: hydrolase
  
• 2pur.pdb. lyase 09-may-07 2pur K
  Title: structure of dihydrodipicolinate synthase mutant thr44ser at 1.7 a.
  Author: r. c. j dobson, g. b. jameson, j. a. gerrard
  Keywords: lyase
  
• 2pwj.pdb. oxidoreductase 11-may-07 2pwj
  Title: structure of a mitochondrial type ii peroxiredoxin from pisum sativum
  Author: f. j. lopez-jaramillo, s. barranco-medina, j. j. lazaro, f. santoyo- gonzalez
  Keywords: oxidoreductase
  
• 2pyg.pdb. isomerase 16-may-07 2pyg Ca
  Title: azotobacter vinelandii mannuronan c-5 epimerase alge4 a- module
  Author: h. j. rozeboom, t. m. bjerkan, k. h. kalk, h. ertesvag, s. holtan, f. l. aachmann, s. valla, b. w. dijkstra
  Keywords: epimerase, isomerase
  
• 2pyh.pdb. isomerase 16-may-07 2pyh Ca
  Title: azotobacter vinelandii mannuronan c-5 epimerase alge4 a- module complexed with mannuronan trisaccharide
  Author: h. j. rozeboom, t. m. bjerkan, k. h. kalk, h. ertesvag, s. holtan, f. l. aachman, s. valla, b. w. dijkstra
  Keywords: epimerase, mannuronic acid, isomerase
  
• 2pz2.pdb. hydrolase 17-may-07 2pz2
  Title: crystal structure of the gdp-bound conformation of a g- alpha-i1 mutant with enhanced gtpase activity
  Author: c. a. johnston, f. s. willard, d. p. siderovski
  Keywords: g-protein, hydrolysis, hydrolase
  
• 2pz3.pdb. hydrolase 17-may-07 2pz3 Mg F Al
  Title: crystal structure of the amf-bound conformation of a g- alpha-i1 mutant with enhanced gtpase activity
  Author: c. a. johnston, f. s. willard, d. p. siderovski
  Keywords: g-protein, hydrolysis, hydrolase
  
• 2pzn.pdb. oxidoreductase 18-may-07 2pzn Cl
  Title: the crystallographic structure of aldose reductase idd393 complex confirms leu300 as a specificity determinant
  Author: f. ruiz, i. hazemann, c. darmanin, a. mitschler, m. van zandt, a. joachimiak, o. el-kabbani, a. podjarny
  Keywords: atomic resolution, x-ray crystallography, ternary complex, inhibitor binding, oxidoreductase
  
• 2q06.pdb. viral protein, rna binding protein 21-may-07 2q06
  Title: crystal structure of influenza a virus h5n1 nucleoprotein
  Author: a. k. l. ng, h. zhang, k. tan, j. wang, p. c. shaw
  Keywords: h5n1, nucleoprotein, viral protein, rna binding protein
  
• 2q5j.pdb. lyase 01-jun-07 2q5j Mg
  Title: x-ray structure of phenylpyruvate decarboxylase in complex with 3-deaza-thdp
  Author: w. versees, s. spaepen, m. d. wood, f. j. leeper, j. vanderleyden, j. steyaert
  Keywords: asymmetric dimer of dimers, open active site loops, cofactor analogue, lyase
  
• 2q5l.pdb. lyase 01-jun-07 2q5l Cl Mg
  Title: x-ray structure of phenylpyruvate decarboxylase in complex with 2-(1-hydroxyethyl)-3-deaza-thdp
  Author: w. versees, s. spaepen, m. d. wood, f. j. leeper, j. vanderleyden, j. steyaert
  Keywords: asymmetric dimer of dimers, open active site loop, covalent intermediate analogue, lyase
  
• 2q5o.pdb. lyase 01-jun-07 2q5o Mg
  Title: x-ray structure of phenylpyruvate decarboxylase in complex with 3-deaza-thdp and phenylpyruvate
  Author: w. versees, s. spaepen, m. d. wood, f. j. leeper, j. vanderleyden, j. steyaert
  Keywords: symmetrical dimer of dimers, closed active site loops, substrate complex, lyase
  
• 2q5q.pdb. lyase 01-jun-07 2q5q Mg
  Title: x-ray structure of phenylpyruvate decarboxylase in complex with 3-deaza-thdp and 5-phenyl-2-oxo-valeric acid
  Author: w. versees, s. spaepen, m. d. wood, f. j. leeper, j. vanderleyden, j. steyaert
  Keywords: symmetrical dimer of dimers, closed active site loops, substrate complex, lyase
  
• 2q60.pdb. transcription 04-jun-07 2q60
  Title: crystal structure of the ligand binding domain of polyandrocarpa misakiensis rxr in tetramer in absence of ligand
  Author: f. borel, a. de groot, c. juillan-binard, e. de rosny, v. laudet, e. pebay-peyroula, j. -c. fontecilla-camps, j. -l. ferrer
  Keywords: apo-tetramer, transcription
  
• 2qgh.pdb. lyase 28-jun-07 2qgh
  Title: crystal structure of diaminopimelate decarboxylase from helicobacter pylori complexed with l-lysine
  Author: t. hu, d. wu, h. jiang, x. shen
  Keywords: lyase
  
• 2qha.pdb. hydrolase 01-jul-07 2qha Zn
  Title: from structure to function: insights into the catalytic substrate specificity and thermostability displayed by bacillus subtilis mannanase bcman
  Author: x. x. yan, d. c. liang
  Keywords: his1-his23-glu336 metal-binding motif, disulfide bond, shallow-dish-shaped active center, hydrolase
  
• 2qrz.pdb. cell cycle 30-jul-07 2qrz Mg
  Title: cdc42 bound to gmp-pcp: induced fit by effector is required
  Author: m. j. phillips, g. calero, b. chan, r. a. cerione
  Keywords: g protein, gtpase, alternative splicing, gtp- binding, lipoprotein, membrane, methylation, nucleotide- binding, prenylation, cell cycle
  
• 2r5u.pdb. hydrolase 04-sep-07 2r5u
  Title: crystal structure of the n-terminal domain of dnab helicase from mycobacterium tuberculosis
  Author: t. biswas, o. v. tsodikov
  Keywords: helicase, primase, replication, atp-binding, autocatalytic cleavage, dna replication, dna-binding, endonuclease, hydrolase, intron homing, nuclease, nucleotide-binding, primosome, protein splicing
  
• 2r9w.pdb. hydrolase 13-sep-07 2r9w
  Title: ampc beta-lactamase with bound phthalamide inhibitor
  Author: k. babaoglu, b. k. shoichet
  Keywords: pthalamide, antibiotic resistance, hydrolase, periplasm
  
• 2r9x.pdb. hydrolase 13-sep-07 2r9x
  Title: ampc beta-lactamase with bound phthalamide inhibitor
  Author: k. babaoglu, b. k. shoichet
  Keywords: pthalamide, antibiotic resistance, hydrolase, periplasm
  
• 2rd7.pdb. immune system 21-sep-07 2rd7 Cl
  Title: human complement membrane attack proteins share a common fold with bacterial cytolysins
  Author: d. j. slade, l. l. lovelace, m. chruszcz, w. minor, l. lebioda, j. m. sodetz
  Keywords: secreted, immune system
  
• 2rd8.pdb. transferase 21-sep-07 2rd8
  Title: human thymidylate synthase stabilized in active conformation by r163k mutation: asymmetry and reactivity of cys195
  Author: l. m. gibson, l. l. lovelace, l. lebioda
  Keywords: methyltransferase, nucleotide biosynthesis
  
• 2rhp.pdb. cell adhesion 09-oct-07 2rhp Ca
  Title: the thrombospondin-1 polymorphism asn700ser associated with cornoary artery disease causes local and long-ranging changes in protein structure
  Author: c. b. carlson, j. l. keck, d. f. mosher
  Keywords: calcium-binding, glycosylated, jelly- roll, egf-like, lectin-like, cell adhesion, egf-like domain, glycoprotein, heparin-binding
  
• 2rit.pdb. transferase 12-oct-07 2rit
  Title: unliganded b-specific-1,3-galactosyltransferase (gtb)
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2rix.pdb. transferase 13-oct-07 2rix Mn
  Title: b-specific-1,3-galactosyltransferase)(gtb) + udp
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2riy.pdb. transferase 13-oct-07 2riy
  Title: b-specific-1,3-galactosyltransferase (gtb)+h-antigen acceptor
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2riz.pdb. transferase 14-oct-07 2riz
  Title: unliganded b-specific-1,3-galactosyltransferase g176r mutant (abbb)
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2rj0.pdb. transferase 14-oct-07 2rj0 Mn
  Title: b-specific alpha-1,3-galactosyltransferase g176r mutant + udp+ mn2+
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2rj1.pdb. transferase 14-oct-07 2rj1 Mn
  Title: b-specific alpha-1,3-galactosyltransferase (gtb) g176r mutant + udp + h-antigen disaccharide
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2rj4.pdb. transferase 14-oct-07 2rj4 Mn
  Title: b-specific alpha-1,3-galactosyltransferase \ g176r +udp+ada
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2rj5.pdb. transferase 14-oct-07 2rj5 Mn
  Title: b-specific alpha-1,3-galactosyltransferase g176r s235g mutant (aabb) +udp
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2rj6.pdb. transferase 14-oct-07 2rj6
  Title: b-specific alpha-1,3-galactosyltransferase g176r s235g mutant (aabb) + h-antigen disaccharide
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2rj7.pdb. transferase 14-oct-07 2rj7 Mn
  Title: b-specific alpha-1,3-galactosyltransferase g176r s235g mutant (aabb) + udpgal + deoxy-acceptor
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2rj8.pdb. transferase 14-oct-07 2rj8 Mn
  Title: b-specific alpha-1,3-galactosyltransferase (gtb) +udp+ h- antigen disaccharide
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2rj9.pdb. transferase 14-oct-07 2rj9 Mn
  Title: b-specific alpha-1,3-galactosyltransferase (gtb) + udp+ amino-deoxy-acceptor
  Author: s. v. evans, j. a. alfaro
  Keywords: blood group antigen, glycoprotein, glycosyltransferase, golgi apparatus, manganese, membrane, metal-binding, polymorphism, secreted, signal-anchor, transferase, transmembrane
  
• 2rp4.pdb. transcription 30-apr-08 2rp4 He Hg (NMR, 20 structures)
  Title: solution structure of the oligomerization domain in dmp53
  Author: h. d. ou, v. doetsch
  Keywords: p53, oligomerization domain, tetramerizaiton domain, nucleus, transcription
  
• 2rp5.pdb. transcription 01-may-08 2rp5 He Hg (NMR, 20 structures)
  Title: solution structure of the oligomerization domain in cep-1
  Author: h. d. ou, v. doetsch
  Keywords: p53, oligomerization domain, sam domain, transcription
  
• 2uul.pdb. electron transport 04-mar-07 2uul
  Title: crystal structure of c-phycocyanin from phormidium, lyngbya spp. (marine) and spirulina sp. (fresh water) shows two different ways of energy transfer between two hexamers.
  Author: l. satyanarayana, a. patel, s. mishra, p. k ghosh, c. g. suresh
  Keywords: c-phycocyanin, phycobilisome, photosynthesis, chromophore, fresh water, methylation, bile pigment, marine, lyngbya, spirulina, transport, phormidium
  
• 2uum.pdb. electron transport 04-mar-07 2uum
  Title: crystal structure of c-phycocyanin from phormidium, lyngbya spp. (marine) and spirulina sp. (fresh water) shows two different ways of energy transfer between two hexamers.
  Author: l. satyanarayana, a. patel, s. mishra, p. k ghosh, c. g. suresh
  Keywords: electron transport, spirulina sp, c-phycocyanin, phycobilisome, marine, transport, lyngbya sp, phormidium, chromophore, fresh water, methylation, bile pigment
  
• 2uvo.pdb. carbohydrate-binding protein 13-mar-07 2uvo
  Title: high resolution crystal structure of wheat germ agglutinin in complex with n-acetyl-d-glucosamine
  Author: d. schwefel, v. wittmann, k. diederichs, w. welte
  Keywords: protein-carbohydrate interaction
  
• 2uvs.pdb. toxin 14-mar-07 2uvs He Hg (NMR, 20 structures)
  Title: high resolution solid-state nmr structure of kaliotoxin
  Author: j. korukottu, a. lange, v. vijayan, r. schneider, o. pongs, s. becker, m. baldus, m. zweckstetter
  Keywords: ionic channel inhibitor, potassium channel inhibitor, toxin, amidation, neurotoxin
  
• 2uwf.pdb. hydrolase 21-mar-07 2uwf Cu Ca
  Title: crystal structure of family 10 xylanase from bacillus halodurans
  Author: g. mamo, m. thunnissen, r. hatti-kaul, b. mattiasson
  Keywords: xylan degradation, xylanase structure, hydrolase, glycosidase, alkaliphilic, endoxylanase, bacillus halodurans, alkaline adaptation
  
• 2ux1.pdb. oxidoreductase 26-mar-07 2ux1 Cl Zn Ca
  Title: identification of two zinc-binding sites in the streptococcus suis dpr protein
  Author: h. havukainen, a. kauko, a. t. pulliainen, s. haataja, w. meyer-klaucke, j. finne, a. c. papageorgiou
  Keywords: zinc, metal-binding, oxidoreductase
  
• 2uxs.pdb. hydrolase 29-mar-07 2uxs
  Title: 2.7a crystal structure of inorganic pyrophosphatase (rv3628) from mycobacterium tuberculosis at ph 7.5
  Author: r. e. cole, m. cianci, j. f. hall, t. matsuda, t. kigawa, s. yokoyama, s. s. hasnain, l. tabernero
  Keywords: rv3628, hydrolase, magnesium, metal-binding, inorganic pyrophosphatase
  
• 2uyc.pdb. transferase 03-apr-07 2uyc
  Title: hhai dna methyltransferase r163n mutant complex with 13mer gcgc-gmgc oligonucleotide and sah
  Author: d. daujotyte, s. grazulis
  Keywords: s-adenosyl-l-methionine, transferase, base flipping, methyltransferase, restriction system, dna methyltransferase
  
• 2uyg.pdb. lyase 05-apr-07 2uyg
  Title: crystallogaphic structure of the typeii 3-dehydroquinase from thermus thermophilus
  Author: h. utsunomiya, y. agari, t. imagawa, h. tsuge
  Keywords: lyase
  
• 2uyh.pdb. transferase 06-apr-07 2uyh
  Title: hhai dna methyltransferase s87q-q237s mutant complex with 13mer gcgc-gmgc oligonucleotide and sah
  Author: d. daujotyte, s. grazulis
  Keywords: s-adenosyl-l-methionine, transferase, base flipping, methyltransferase, restriction system, dna methyltransferase
  
• 2uyr.pdb. hydrolase 12-apr-07 2uyr Mg
  Title: crystal structure of bacillus cereus sphingomyelinase mutant :n57a
  Author: m. oda, h. tsuge, j. sakurai
  Keywords: n57a metal ion of side-edge, bacillus cereus sphingomyelinase, hydrolase, hemolysis, cytolysis
  
• 2uyw.pdb. glycoprotein 20-apr-07 2uyw
  Title: crystal structure of xenavidin
  Author: s. h. helppolainen, j. a. e. maatta, t. t. airenne, m. s. johnson, m. s. kulomaa, h. r. nordlund
  Keywords: beta-barrel, biotin-binding protein, glycoprotein
  
• 2vc9.pdb. hydrolase 19-sep-07 2vc9 Ca
  Title: family 89 glycoside hydrolase from clostridium perfringens in complex with 2-acetamido-1,2-dideoxynojirmycin
  Author: e. ficko-blean, k. a. stubbs, o. berg, d. j. vocadlo, a. b. boraston
  Keywords: 2-acetamido-1,2-dideoxynojirmycin, gh89, naglu, sanfilippo disease, hydrolase, alpha-n-acetylglucosaminidase, family 89 glycoside hydrolase
  
• 2vca.pdb. hydrolase 19-sep-07 2vca Ca
  Title: family 89 glycoside hydrolase from clostridium perfringens in complex with beta-n-acetyl-d-glucosamine
  Author: e. ficko-blean, k. a. stubbs, o. berg, d. j. vocadlo, a. b. boraston
  Keywords: beta-n-acetyl-d-glucosamine, gh89, naglu, sanfilippo disease, hydrolase, alpha-n-acetylglucosaminidase, family 89 glycoside hydrolase
  
• 2vcb.pdb. hydrolase 19-sep-07 2vcb Ca
  Title: family 89 glycoside hydrolase from clostridium perfringens in complex with pugnac
  Author: e. ficko-blean, k. a. stubbs, o. berg, d. j. vocadlo, a. b. boraston
  Keywords: alpha-n-acetylglucosaminidase, family 89 glycoside hydrolase, hydrolase, gh89, naglu, pugnac, sanfilippo disease
  
• 2vcc.pdb. hydrolase 19-sep-07 2vcc Ca
  Title: family 89 glycoside hydrolase from clostridium perfringens
  Author: e. ficko-blean, k. a. stubbs, o. berg, d. j. vocadlo, a. b. boraston
  Keywords: naglu, sanfilippo disease, hydrolase, mucopolysaccharidosis, alpha-n-acetylglucosaminidase, family 89 glycoside hydrolase
  
• 2vid.pdb. hydrolase 30-nov-07 2vid
  Title: serine protease splb from staphylococcus aureus at 1.8a resolution
  Author: g. dubin, j. stec-niemczyk, m. kisielewska, k. pustelny, g. m. popowicz, m. bista, t. kantyka, k. t. boulware, h. r. stennicke, a. czarna, m. phopaisarn, p. s. daugherty, i. b. thogersen, j. j. enghild, n. thornberry, a. dubin, j. potempa
  Keywords: serine protease, staphylococcus aureus, hydrolase
  
• 2vl1.pdb. hydrolase 07-jan-08 2vl1 Zn
  Title: crystal structure of beta-alanine synthase from saccharomyces kluyveri in complex with the a gly-gly peptide
  Author: b. andersen, s. lundgren, d. dobritzsch, j. piskur,
  Keywords: di-zinc center, amidohydrolase, alpha and beta protein, complex with glycine-glycine
  
• 2vq2.pdb. structural protein 10-mar-08 2vq2 Cl Mg
  Title: crystal structure of pilw, widely conserved type iv pilus biogenesis factor
  Author: m. b. trinidade, v. job, c. contreras-martel, v. pelicic, a. dessen
  Keywords: tpr repeat, type iv pilus, bacterail virulence, structural protein
  
• 2vqg.pdb. membrane protein 15-mar-08 2vqg Zn As
  Title: crystal structure of porb from corynebacterium glutamicum ( crystal form i)
  Author: k. ziegler, r. benz, g. e. schulz
  Keywords: membrane protein, porin, membrane, transport, ion transport
  
• 2vqh.pdb. membrane protein 15-mar-08 2vqh Zn As
  Title: crystal structure of porb from corynebacterium glutamicum ( crystal form ii)
  Author: k. ziegler, r. benz, g. e. schulz
  Keywords: membrane protein, porin, membrane, transport, ion transport
  
• 2vqi.pdb. transport 16-mar-08 2vqi Se
  Title: structure of the p pilus usher (papc) translocation pore
  Author: h. remaut, c. tang, n. s. henderson, j. s. pinkner, t. wang, s. j. hultgren, d. g. thanassi, h. li, g. waksman
  Keywords: outer membrane, transport, usher, p pilus, membrane, fimbrium, om translocation pore, pilus assembly platform
  
• 2vqk.pdb. membrane protein 17-mar-08 2vqk Zn As
  Title: crystal structure of porb from corynebacterium glutamicum ( crystal form iv)
  Author: k. ziegler, r. benz, g. e. schulz
  Keywords: membrane protein, porin, membrane, transport, ion transport
  
• 2vql.pdb. membrane protein 17-mar-08 2vql Zn As
  Title: crystal structure of porb from corynebacterium glutamicum ( crystal form iii)
  Author: k. ziegler, r. benz, g. e. schulz
  Keywords: membrane protein, porin, membrane, transport, ion transport
  
• 2vrl.pdb. oxidoreductase 09-apr-08 2vrl
  Title: structure of human mao b in complex with benzylhydrazine
  Author: c. binda, j. wang, m. li, f. hubalek, a. mattevi, d. e. edmondson
  Keywords: flavin, membrane, hydrazine, acetylation, flavoprotein, mitochondrion, transmembrane, inhibitor binding, oxidoreductase, membrane protein, monoamine oxidase
  
• 2vrm.pdb. oxidoreductase 09-apr-08 2vrm
  Title: structure of human mao b in complex with phenyethylhydrazine
  Author: c. binda, j. wang, m. li, f. hubalek, a. mattevi, d. e. edmondson
  Keywords: flavin, membrane, hydrazine, acetylation, flavoprotein, mitochondrion, transmembrane, inhibitor binding, oxidoreductase, membrane protein, monoamine oxidase
  
• 2vs2.pdb. hydrolase inhibitor 17-apr-08 2vs2 He Hg D F (neutron diffraction)
  Title: neutron diffraction structure of endothiapepsin in complex with a gem-diol inhibitor.
  Author: l. coates, h-. f. tuan, s. tomanicek, a. kovalevsky, m. mustyakimov, p. erskine, j. cooper
  Keywords: neutron structure, acid proteinase, aspartyl protease, zymogen, protease, hydrolase inhibitor
  
• 2vss.pdb. lyase 29-apr-08 2vss
  Title: wild-type hydroxycinnamoyl-coa hydratase lyase in complex with acetyl-coa and vanillin
  Author: j. p. bennett, l. m. bertin, a. m. brzozowski, n. j. walton, g. grogan
  Keywords: aldolase, crotonase, hydratase
  
• 2vsu.pdb. lyase 29-apr-08 2vsu
  Title: a ternary complex of hydroxycinnamoyl-coa hydratase-lyase ( hchl) with acetyl-coenzyme a and vanillin gives insights into substrate specificity and mechanism.
  Author: j. p. bennett, l. m. bertin, a. m. brzozowski, n. j. walton, g. grogan
  Keywords: aldolase, crotonase, hydratase
  
• 2z2e.pdb. hydrolase 21-may-07 2z2e
  Title: crystal structure of canine milk lysozyme stabilized against non-enzymatic deamidation
  Author: y. nonaka, d. akieda, n. watanabe, i. tanaka, m. kamiya, t. aizawa, k. nitta, m. demura, k. kawano
  Keywords: milk lysozyme, 1,4-beta-n-acetylmuramidase c, bacteriolytic enzyme, hydrolase
  
• 2z2f.pdb. hydrolase 21-may-07 2z2f Na
  Title: x-ray crystal structure of bovine stomach lysozyme
  Author: d. akieda, y. nonaka, n. watanabe, i. tanaka, m. kamiya, t. aizawa, k. nitta, m. demura, k. kawano
  Keywords: stomach lysozyme, 1,4-beta-n-acetylmuramidase c, bacteriolytic enzyme, hydrolase
  
• 2z42.pdb. lyase 12-jun-07 2z42
  Title: crystal struture of family 7 alginate lyase a1-ii' from sphingomonas sp. a1
  Author: k. ogura, m. yamasaki, w. hashimoto, b. mikami, k. murata
  Keywords: polysaccharide lyase family 7
  
• 2z6e.pdb. protein fibril regulator 31-jul-07 2z6e
  Title: crystal structure of human daam1 fh2
  Author: m. yamashita, t. higashi, y. sato, r. shirakawa, t. kita, h. horiuchi, s. fukai, o. nureki
  Keywords: alternative splicing, cytoplasm, protein fibril regulator
  
• 2za9.pdb. lyase 02-oct-07 2za9
  Title: crystal structure of alginate lyase a1-ii' n141c/n199c
  Author: k. ogura, m. yamasaki, b. mikami, w. hashimoto, k. murata
  Keywords: polysaccharide lyase family 7, n141c/n199c
  
• 2zaa.pdb. lyase 02-oct-07 2zaa
  Title: crystal structure of family 7 alginate lyase a1-ii' h191n/y284f in complex with substrate (ggmg)
  Author: k. ogura, m. yamasaki, b. mikami, w. hashimoto, k. murata
  Keywords: polysaccharide lyase family 7, y284f_tetrasacchride complex
  
• 2zab.pdb. lyase 02-oct-07 2zab
  Title: crystal structure of family 7 alginate lyase a1-ii' y284f in cmplex with product (ggg)
  Author: k. ogura, m. yamasaki, b. mikami, w. hashimoto, k. murata
  Keywords: polysaccharide lyase family 7, y284f, complex
  
• 2zac.pdb. lyase 02-oct-07 2zac
  Title: crystal structure of family 7 alginate lyase a1-ii' y284f in complex with product (mmg)
  Author: k. ogura, m. yamasaki, b. mikami, w. hashimoto, k. murata
  Keywords: polysaccharide lyase family 7, y284f_mmg complex
  
• 2zct.pdb. oxidoreductase 12-nov-07 2zct
  Title: oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
  Author: t. nakamura, y. hagihara, m. abe, t. inoue, t. yamamoto, h. matsumura
  Keywords: peroxiredoxin, oxidoreductase
  
• 2zcu.pdb. oxidoreductase 13-nov-07 2zcu Cu
  Title: crystal structure of a new type of nadph-dependent quinone oxidoreductase (qor2) from escherichia coli
  Author: i. k. kim, h. s. yim, m. k. kim, d. w. kim, y. m. kim, s. s. cha, s. o. kang
  Keywords: oxidoreductase
  
• 2zcv.pdb. oxidoreductase 13-nov-07 2zcv Cu
  Title: crystal structure of nadph-dependent quinone oxidoreductase qor2 complexed with nadph from escherichia coli
  Author: i. k. kim, h. s. yim, m. k. kim, d. w. kim, y. m. kim, s. s. cha, s. o. kang
  Keywords: complex with nadph, oxidoreductase
  
• 2zdc.pdb. structural genomics, unknown function 21-nov-07 2zdc
  Title: crystal structure of dutpase from sulfolobus tokodaii
  Author: m. kanagawa, baba s. , s. kuramitsu, s. yokoyama, g. kawai, g. sampei, riken structural genomics/proteomics initiative (rsgi)
  Keywords: hydrolase, nucleotide metabolism, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, structural genomics, unknown function
  
• 2zdg.pdb. ligase 22-nov-07 2zdg Mg
  Title: crystal structure of d-alanine:d-alanine ligase with adp from thermus thermophius hb8
  Author: y. kitamura, s. yokoyama, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi
  
• 2zdh.pdb. ligase 22-nov-07 2zdh Mg
  Title: crystal structure of d-alanine:d-alanine ligase with adp and d-alanine from thermus thermophius hb8
  Author: y. kitamuta, s. yokoyama, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi
  
• 2zdq.pdb. ligase 27-nov-07 2zdq
  Title: crystal structure of d-alanine:d-alanine ligase with atp and d-alanine:d-alanine from thermus thermophius hb8
  Author: y. kitamuta, s. yokoyama, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi
  
• 2zgw.pdb. ligase 28-jan-08 2zgw
  Title: crystal structure of biotin protein ligase from pyrococcus horikoshii complexed with adenosine and biotin, mutations r48a and k111a
  Author: b. bagautdinov, y. matsuura, s. bagautdinova, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dimer, x-ray diffraction, ligase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2zhr.pdb. hydrolase/hydrolase inhibitor 08-feb-08 2zhr
  Title: crystal structure of bace1 in complex with om99-2 at ph 5.0
  Author: h. shimizu, n. nukina
  Keywords: ph 5.0, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, protease, transmembrane, zymogen, hydrolase/hydrolase inhibitor complex
  
• 2zhs.pdb. hydrolase 08-feb-08 2zhs
  Title: crystal structure of bace1 at ph 4.0
  Author: h. shimizu, n. nukina
  Keywords: alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, protease, transmembrane, zymogen
  
• 2zht.pdb. hydrolase 08-feb-08 2zht
  Title: crystal structure of bace1 at ph 4.5
  Author: h. shimizu, n. nukina
  Keywords: alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, protease, transmembrane, zymogen
  
• 2zhu.pdb. hydrolase 08-feb-08 2zhu
  Title: crystal structure of bace1 at ph 5.0
  Author: h. shimizu, n. nukina
  Keywords: alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, protease, transmembrane, zymogen
  
• 2zhv.pdb. hydrolase 08-feb-08 2zhv
  Title: crystal structure of bace1 at ph 7.0
  Author: h. shimizu, n. nukina
  Keywords: alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, protease, transmembrane, zymogen
  
• 2ziy.pdb. signaling protein 27-feb-08 2ziy
  Title: crystal structure of squid rhodopsin
  Author: m. miyano, t. shimamura
  Keywords: signaling protein
  
• 2zmc.pdb. transferase 16-apr-08 2zmc
  Title: crystal structure of human mitotic checkpoint kinase mps1 catalytic domain apo form
  Author: m. l. h. chu, l. m. g. chavas, k. t. douglas, p. a. eyers, l. tabernero
  Keywords: mps1, mitosis, atp-binding, nucleotide-binding, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase, tyrosine-protein kinase
  
• 2zmd.pdb. transferase 16-apr-08 2zmd
  Title: crystal structure of human mps1 catalytic domain t686a mutant in complex with sp600125 inhibitor
  Author: m. l. h. chu, l. m. g. chavas, k. t. douglas, p. a. eyers, l. tabernero
  Keywords: mps1, sp600125, t686a, atp-binding, nucleotide- binding, phosphoprotein, polymorphism, serine/threonine- protein kinase, transferase, tyrosine-protein kinase
  
• 2zod.pdb. transferase 09-may-08 2zod
  Title: crystal structure of selenophosphate synthetase from aquifex aeolicus
  Author: s. sekine, e. matsumoto, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi
  
• 3b9l.pdb. lipid binding protein 05-nov-07 3b9l
  Title: human serum albumin complexed with myristate and azt
  Author: l. zhu, f. yang, l. chen, e. j. meehan, m. huang
  Keywords: alternative splicing, cleavage on pair of basic residues, copper, disease mutation, glycation, glycoprotein, lipid-binding, metal-binding, polymorphism, secreted, lipid binding protein
  
• 3b9m.pdb. lipid binding protein 05-nov-07 3b9m
  Title: human serum albumin complexed with myristate, 3'-azido-3'- deoxythymidine (azt) and salicylic acid
  Author: l. zhu, f. yang, l. chen, e. j. meehan, m. huang
  Keywords: alternative splicing, cleavage on pair of basic residues, copper, disease mutation, glycation, glycoprotein, lipid-binding, metal-binding, polymorphism, secreted, lipid binding protein
  
• 3bbo.pdb. ribosome 09-nov-07 3bbo (cryo-electron microscopy)
  Title: homology model for the spinach chloroplast 50s subunit fitted to 9.4a cryo-em map of the 70s chlororibosome
  Author: m. r. sharma, d. n. wilson, p. p. datta, c. barat, f. schluenzen, p. fucini, r. k. agrawal
  Keywords: spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex
  
• 3bbz.pdb. viral protein, replication 11-nov-07 3bbz Br
  Title: structure of the nucleocapsid-binding domain from the mumps virus phosphoprotein
  Author: r. l. kingston, l. s. gay, w. s. baase, b. w. matthews
  Keywords: viral protein, replication
  
• 3bk3.pdb. hormone/growth factor 05-dec-07 3bk3
  Title: crystal structure of the complex of bmp-2 and the first von willebrand domain type c of crossveinless-2
  Author: t. d. mueller, w. sebald, j. -l. zhang
  Keywords: polymorphism, secreted, hormone/growth factor complex
  
• 3bmv.pdb. transferase 13-dec-07 3bmv Ca
  Title: cyclodextrin glycosyl transferase from thermoanerobacterium thermosulfurigenes em1 mutant s77p
  Author: h. j. rozeboom, n. van oosterwijk, b. w. dijkstra
  Keywords: thermostable, family 13 glycosyl hydrolas, ligand, substrate, acarbose, calcium, glycosyltransferase, metal-binding, secreted, transferase
  
• 3bmw.pdb. transferase 13-dec-07 3bmw Cl Ca
  Title: cyclodextrin glycosyl transferase from thermoanerobacterium thermosulfurigenes em1 mutant s77p complexed with a maltoheptaose inhibitor
  Author: h. j. rozeboom, n. van oosterwijk, b. w. dijkstra
  Keywords: thermostable, family 13 glycosyl hydrolas, ligand, substrate, acarbose, calcium, glycosyltransferase, metal-binding, secreted, transferase
  
• 3bn0.pdb. ribosome 13-dec-07 3bn0
  Title: the ribosomal protein s16 from aquifex aeolicus
  Author: o. pylypenko, a. rak
  Keywords: ribonucleoprotein, ribosome
  
• 3bp8.pdb. transcription 18-dec-07 3bp8 Zn
  Title: crystal structure of mlc/eiib complex
  Author: y. j. an, h. i. jung, s. s. cha
  Keywords: transmembrane, transport
  
• 3bq8.pdb. signaling protein, transferase 19-dec-07 3bq8 Ni Se
  Title: crystal structure of the e.coli phoq sensor domain
  Author: j. cheung, w. a. hendrickson, c. d. waldburger
  Keywords: atp-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding, phosphoprotein, transferase, transmembrane, two-component regulatory system, signaling protein, transferase
  
• 3bqa.pdb. signaling protein, transferase 19-dec-07 3bqa
  Title: crystal structure of an e.coli phoq sensor domain mutant
  Author: j. cheung, w. a. hendrickson, c. d. waldburger
  Keywords: atp-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding, phosphoprotein, transferase, transmembrane, two-component regulatory system, signaling protein, transferase
  
• 3bqd.pdb. protein binding 20-dec-07 3bqd
  Title: doubling the size of the glucocorticoid receptor ligand binding pocket by deacylcortivazol
  Author: h. e. xu
  Keywords: ubl conjugation, zinc, zinc- finger, acyltransferase, chromosomal rearrangement, proto- oncogene, transferase, protein binding
  
• 3bqj.pdb. viral protein 20-dec-07 3bqj
  Title: va387 polypeptide
  Author: w. bu, a. mamedova, m. tan, j. jiang, r. hegde
  Keywords: two folded units p1 and p2, viral protein
  
• 3bt6.pdb. viral protein 27-dec-07 3bt6
  Title: crystal structure of influenza b virus hemagglutinin
  Author: q. wang, f. cheng, m. lu, x. tian, j. ma
  Keywords: membrane fusion, envelope protein, fusion protein, hemagglutinin, transmembrane, virion, glycoprotein, lipoprotein, palmitate, viral protein
  
• 3c02.pdb. membrane protein 18-jan-08 3c02
  Title: x-ray structure of the aquaglyceroporin from plasmodium falciparum
  Author: z. e. r. newby, r. m. stroud, center for structures of membrane proteins (csmp)
  Keywords: glycerol, water, transport, structural genomics, psi-2, protein structure initiative, center for structures of membrane proteins, csmp, porin, transmembrane
  
• 3c2x.pdb. antibiotic 26-jan-08 3c2x
  Title: crystal structure of peptidoglycan recognition protein at 1.8a resolution
  Author: p. sharma, n. singh, m. sinha, s. sharma, m. perbandt, c. betzel, p. kaur, a. srinivasan, t. p. singh
  Keywords: secretory, immune response, antimicrobial, secreted
  
• 3c4o.pdb. hydrolase/hydrolase inhibitor 30-jan-08 3c4o
  Title: crystal structure of the shv-1 beta-lactamase/beta- lactamase inhibitor protein (blip) e73m/s130k/s146m complex
  Author: k. a. reynolds, m. s. hanes, j. m. thomson, a. j. antczak, j. m. berger, r. a. bonomo, j. f. kirsch, t. m. handel
  Keywords: beta-lactamase inhibitory protein, protein- protein complex, blip, shv-1, antibiotic resistance, hydrolase, plasmid, secreted, hydrolase/hydrolase inhibitor complex
  
• 3c4p.pdb. hydrolase/hydrolase inhibitor 30-jan-08 3c4p
  Title: crystal structure of the shv-1 beta-lactamase/beta- lactamase inhibitor protein (blip) e73m complex
  Author: k. a. reynolds, m. s. hanes, j. m. thomson, a. j. antczak, j. m. berger, r. a. bonomo, j. f. kirsch, t. m. handel
  Keywords: beta-lactamase inhibitory protein, protein- protein complex, blip, shv-1, antibiotic resistance, hydrolase, plasmid, secreted, hydrolase/hydrolase inhibitor complex
  
• 3c5q.pdb. lyase 01-feb-08 3c5q
  Title: crystal structure of diaminopimelate decarboxylase (i148l mutant) from helicobacter pylori complexed with l-lysine
  Author: t. hu, d. wu, h. jiang, x. shen
  Keywords: lyase
  
• 3c7n.pdb. chaperone/chaperone 07-feb-08 3c7n Cl Mg F Be
  Title: structure of the hsp110:hsc70 nucleotide exchange complex
  Author: j. p. schuermann, j. jiang, p. j. hart, r. sousa
  Keywords: nucleotide-binding, phosphoprotein, nucleus, transcription, chaperone/chaperone complex
  
• 3c99.pdb. transcription repressor 15-feb-08 3c99 Cd
  Title: structural basis of histone h4 recognition by p55
  Author: j. j. song, j. d. garlick, r. e. kingston
  Keywords: histone binding, chromatin, epigenetics, chromatin regulator, nucleus, phosphoprotein, repressor, transcription, transcription regulation, wd repeat, nuclear protein, transcription repressor
  
• 3c9c.pdb. transcription repressor 15-feb-08 3c9c Cd
  Title: structural basis of histone h4 recognition by p55
  Author: j. j. song, j. d. garlick, r. e. kingston
  Keywords: nuclear protein, transcription repressor
  
• 3cbj.pdb. hydrolase/hydrolase inhibitor 22-feb-08 3cbj
  Title: chagasin-cathepsin b complex
  Author: i. redzynia, g. d. bujacz, m. abrahamson, a. ljunggren, m. jaskolski, j. s. mort
  Keywords: hydrolase/hydrolase inhibitor complex
  
• 3cbk.pdb. hydrolase/hydrolase inhibitor 22-feb-08 3cbk
  Title: chagasin-cathepsin b
  Author: i. redzynia, g. d. bujacz, m. abrahamson, a. ljunggren, m. jaskolski, j. s. mort
  Keywords: hydrolase/hydrolase inhibitor complex
  
• 3ccn.pdb. transferase 26-feb-08 3ccn
  Title: x-ray structure of c-met with triazolopyridazine inhibitor.
  Author: b. k. abrecht, j. -c. harmange, d. bauer, i. dussault, a. long, s. f. bellon
  Keywords: atp-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto- oncogene, receptor, transferase, transmembrane, tyrosine- protein kinase
  
• 3cd8.pdb. transferase 26-feb-08 3cd8
  Title: x-ray structure of c-met with triazolopyridazine inhibitor.
  Author: s. f. bellon, b. k. albrecht, j. -c. harmange, d. bauer, d. choquette, i. dussault
  Keywords: kinase, triazolopyridazine, atp-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene, receptor, transferase, transmembrane, tyrosine-protein kinase
  
• 3ceh.pdb. transferase 29-feb-08 3ceh Cl F
  Title: human liver glycogen phosphorylase (tense state) in complex with the allosteric inhibitor ave5688
  Author: k. u. wendt, m. k. dreyer, o. anderka, t. klabunde, p. loenze, e. defossa, d. schmoll
  Keywords: phosphoprotein, polymorphism, pyridoxal phosphate, transferase
  
• 3cej.pdb. transferase 29-feb-08 3cej Cl F
  Title: human glycogen phosphorylase (tense state) in complex with the allosteric inhibitor ave2865
  Author: k. u. wendt, m. k. dreyer, o. anderka, t. klabunde, p. loenze, e. defossa, d. schmoll
  Keywords: phosphoprotein, polymorphism, pyridoxal phosphate,
  
• 3cem.pdb. transferase 29-feb-08 3cem Cl F
  Title: human glycogen phosphorylase (tense state) in complex with the allosteric inhibitor ave9423
  Author: k. u. wendt, m. k. dreyer, o. anderka, t. klabunde, p. loenze, e. defossa, d. schmoll
  Keywords: phosphoprotein, polymorphism, pyridoxal phosphate
  
• 3cg5.pdb. hydrolase 04-mar-08 3cg5
  Title: crystal structure of the covalent adduct formed between tb b-lactamase and clavulanate
  Author: l. w. tremblay, j. e. hugonnet, j. s. blanchard
  Keywords: covalent adduct, antibiotic resistance, hydrolase, lipoprotein, membrane, palmitate
  
• 3chh.pdb. oxidoreductase 09-mar-08 3chh Fe
  Title: crystal structure of di-iron aurf
  Author: h. zhang, j. s. brunzelle, s. k. nair
  Keywords: oxidoreductase
  
• 3chi.pdb. oxidoreductase 09-mar-08 3chi Fe
  Title: crystal structure of di-iron aurf (monoclinic form)
  Author: h. zhang, j. s. brunzelle, s. k. nair
  Keywords: oxidoreductase
  
• 3cho.pdb. hydrolase 10-mar-08 3cho Zn Yb
  Title: crystal structure of leukotriene a4 hydrolase in complex with 2-amino-n-[4-(phenylmethoxy)phenyl]-acetamide
  Author: m. m. g. m. thunnissen, m. adler, m. whitlow
  Keywords: alpha-beta protein, leukotriene biosynthesis, metalloprotease, inhibitor complex, alternative splicing, cytoplasm, metal-binding, multifunctional enzyme, zinc
  
• 3chp.pdb. hydrolase 10-mar-08 3chp Zn Yb
  Title: crystal structure of leukotriene a4 hydrolase in complex with (3s)-3-amino-4-oxo-4-[(4-phenylmethoxyphenyl) amino]butanoic acid
  Author: m. m. g. m. thunnissen, m. adler, m. whitlow
  Keywords: alpha-beta protein, leukotriene biosynthesis, metalloprotease, inhibitor complex, alternative splicing, cytoplasm, metal-binding, multifunctional enzyme, zinc
  
• 3chq.pdb. hydrolase 10-mar-08 3chq Zn Yb
  Title: crystal structure of leukotriene a4 hydrolase in complex with n5-[4-(phenylmethoxy)phenyl]-l-glutamine
  Author: m. m. g. m. thunnissen, m. adler, m. whitlow
  Keywords: alpha-beta protein, leukotriene biosynthesis, metalloprotease, inhibitor complex, alternative splicing, cytoplasm, metal-binding, multifunctional enzyme, zinc
  
• 3chr.pdb. hydrolase 10-mar-08 3chr Zn Yb
  Title: crystal structure of leukotriene a4 hydrolase in complex with 4-amino-n-[4-(phenylmethoxy)phenyl]-butanamide
  Author: m. m. g. m. thunnissen, m. adler, m. whitlow
  Keywords: alpha-beta protein, leukotriene biosynthesis, metalloprotease, inhibitor complex, alternative splicing, cytoplasm, metal-binding, multifunctional enzyme, zinc
  
• 3chs.pdb. hydrolase 10-mar-08 3chs Zn Yb
  Title: crystal structure of leukotriene a4 hydrolase in complex with (2s)-2-amino-5-[[4-[(2s)-2-hydroxy-2-phenyl- ethoxy]phenyl]amino]-5-oxo-pentanoic acid
  Author: m. m. g. m. thunnissen, m. adler, m. whitlow
  Keywords: alpha-beta protein, leukotriene biosynthesis, metalloprotease, inhibitor complex, alternative splicing, cytoplasm, metal-binding, multifunctional enzyme, zinc
  
• 3cht.pdb. oxidoreductase 10-mar-08 3cht Fe
  Title: crystal structure of di-iron aurf with partially bound ligand
  Author: h. zhang, j. s. brunzelle, s. k. nair
  Keywords: oxidoreductase
  
• 3chu.pdb. oxidoreductase 10-mar-08 3chu Fe
  Title: crystal structure of di-iron aurf
  Author: h. zhang, j. s. brunzelle, s. k. nair
  Keywords: oxidoreductase
  
• 3ci1.pdb. transferase 10-mar-08 3ci1 Co Mg K
  Title: structure of the pduo-type atp:co(i)rrinoid adenosyltransferase from lactobacillus reuteri complexed with four-coordinate cob(ii)alamin and atp
  Author: m. st. maurice, p. e. mera, j. c. escalante-semerena, i. rayment
  Keywords: atp binding, four-coordinate cob(ii) alamin
  
• 3ci3.pdb. transferase 10-mar-08 3ci3 Co Mg Na
  Title: structure of the pduo-type atp:co(i)rrinoid adenosyltransferase from lactobacillus reuteri complexed with partial adenosylcobalamin and pppi
  Author: m. st. maurice, p. e. mera, j. c. escalante-semerena, i. rayment
  Keywords: adenosylcobalamin binding, atp binding
  
• 3ci4.pdb. transferase 10-mar-08 3ci4 Co Mg K
  Title: structure of the pduo-type atp:co(i)rrinoid adenosyltransferase from lactobacillus reuteri complexed with four-coordinate cob(ii)inamide and atp
  Author: m. st. maurice, p. e. mera, j. c. escalante-semerena, i. rayment
  Keywords: atp binding, corrin binding
  
• 3cj1.pdb. hydrolase 12-mar-08 3cj1
  Title: structure of rattus norvegicus ntpdase2
  Author: m. zebisch, n. strater
  Keywords: alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium, membrane, transmembrane
  
• 3cj7.pdb. hydrolase 12-mar-08 3cj7
  Title: structure of rattus norvegicus ntpdase2 in complex with amp
  Author: m. zebisch, n. strater
  Keywords: alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium, membrane, transmembrane
  
• 3cj9.pdb. hydrolase 12-mar-08 3cj9 Ca
  Title: structure of rattus norvegicus ntpdase2 in complex with calcium, amp and phosphate
  Author: m. zebisch, n. strater
  Keywords: alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium, membrane, transmembrane
  
• 3cja.pdb. hydrolase 12-mar-08 3cja Ca
  Title: structure of rattus norvegicus ntpdase2 in complex with calcium and amppnp
  Author: m. zebisch, n. strater
  Keywords: alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium, membrane, transmembrane
  
• 3cog.pdb. lyase 28-mar-08 3cog
  Title: crystal structure of human cystathionase (cystathionine gamma lyase) in complex with dl-propargylglycine
  Author: r. collins, t. karlberg, l. lehtio, c. h. arrowsmith, h. berglund, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, i. johansson, a. kallas, t. kotenyova, m. moche, m. e. nilsson, p. nordlund, t. nyman, k. olesen, c. persson, h. schuler, l. svensson, a. g. thorsell, l. tresaugues, s. van den berg, j. sagermark, r. d. busam, m. welin, j. weigelt, m. wikstrom, structural genomics consortium (sgc)
  Keywords: disease mutation, lyase, phosphoprotein, polymorphism, pyridoxal phosphate
  
• 3coj.pdb. antitumor protein/ligase 28-mar-08 3coj
  Title: crystal structure of the brct domains of human brca1 in complex with a phosphorylated peptide from human acetyl- coa carboxylase 1
  Author: y. shen, l. tong
  Keywords: nucleotide-binding, antitumor protein/ligase complex
  
• 3cqb.pdb. hydrolase 02-apr-08 3cqb Cl Na Se
  Title: crystal structure of heat shock protein htpx domain from vibrio parahaemolyticus rimd 2210633
  Author: r. wu, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: zinc
  
• 3cqu.pdb. transferase 03-apr-08 3cqu
  Title: crystal structure of akt-1 complexed with substrate peptide and inhibitor
  Author: j. pandit
  Keywords: serine/threonine-protein kinase, sugar transport, transferase, translation regulation, transport, alternative splicing, wnt signaling pathway
  
• 3cqw.pdb. transferase 03-apr-08 3cqw Cl Mn
  Title: crystal structure of akt-1 complexed with substrate peptide and inhibitor
  Author: j. pandit
  Keywords: serine/threonine-protein kinase, sugar transport, transferase, translation regulation, transport, alternative splicing, wnt signaling pathway
  
• 3cs0.pdb. hydrolase 08-apr-08 3cs0 Se
  Title: crystal structure of degp24
  Author: t. krojer, j. sawa, e. schaefer, h. r. saibil, m. ehrmann, t. clausen
  Keywords: htra, protease, chaperone, pdz, outer membrane protein, omp, periplasm, hydrolase
  
• 3cs4.pdb. gene regulation 09-apr-08 3cs4
  Title: structure-based design of a superagonist ligand for the vitamin d nuclear receptor
  Author: s. hourai, l. c. rodriguez, p. antony, b. reina-san-martin, f. ciesielski, b. c. magnier, k. schoonjans, a. mourino, n. rochel, d. moras
  Keywords: superagonist, disease mutation, dna-binding, metal- binding, nucleus, phosphoprotein, polymorphism, receptor, transcription, transcription regulation, zinc, zinc-finger, gene regulation
  
• 3cs6.pdb. gene regulation 09-apr-08 3cs6
  Title: structure-based design of a superagonist ligand for the vitamin d nuclear receptor
  Author: s. hourai, l. c. rodriguez, p. antony, b. reina-san-martin, p. ciesielski, b. c. magnier, k. schoonjans, a. mourino, n. rochel, d. moras
  Keywords: agonist, disease mutation, dna-binding, metal-binding, nucleus, phosphoprotein, polymorphism, receptor, transcription, transcription regulation, zinc, zinc-finger, gene regulation
  
• 3csf.pdb. transferase 09-apr-08 3csf Ru
  Title: crystal structure of pi3k p110gamma catalytical domain in complex with organoruthenium inhibitor dw2
  Author: p. xie, r. marmorstein
  Keywords: pi3k, transferase
  
• 3ctk.pdb. hydrolase 14-apr-08 3ctk
  Title: crystal structure of the type 1 rip bouganin
  Author: s. fermani, g. tosi, g. falini, a. ripamonti, v. farini, a. bolognesi, l. polito
  Keywords: hydrolase
  
• 3ctm.pdb. oxidoreductase 14-apr-08 3ctm
  Title: crystal structure of a carbonyl reductase from candida parapsilosis with anti-prelog stereo-specificity
  Author: r. zhang, g. zhu, x. li, y. xu, x. c. zhang, z. rao
  Keywords: candida parapsilosis, short-chain dehydrogenases/reductases (sdr), x-ray crystallography, oxidoreductase
  
• 3ctq.pdb. transferase 14-apr-08 3ctq
  Title: structure of map kinase p38 in complex with a 1-o-tolyl-1,2, 3-triazole-4-carboxamide
  Author: k. qian
  Keywords: transferase
  
• 3ctz.pdb. hydrolase 15-apr-08 3ctz Mn Na Ca
  Title: structure of human cytosolic x-prolyl aminopeptidase
  Author: x. li, z. lou, z. rao
  Keywords: alternative splicing, aminopeptidase, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease
  
• 3cxk.pdb. oxidoreductase 24-apr-08 3cxk Zn
  Title: 1.7 a crystal structure of methionine-r-sulfoxide reductase from burkholderia pseudomallei: crystallization in a microfluidic crystal card
  Author: s. lovell, c. gerdts, b. staker, d. craigen, l. stewart, accelerated technologies center for gene to 3d structure (atcg3d)
  Keywords: burkholderia, msrb, oxidoreductase, microfluidic labcard, psi-2, protein structure initiative, accelerated technologies center for gene to 3d structure, atcg3d
  
• 3cym.pdb. structural genomics, unknown function 25-apr-08 3cym Na
  Title: crystal structure of protein bad_0989 from bifidobacterium adolescentis
  Author: y. patskovsky, s. ozyurt, j. freeman, s. chang, k. bain, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: unknown function, uncharacterized protein, ribonuclease d, exonuclease, protein structure initiative, psi-2, new york structural genomix research consortium, nysgxrc
  
• 3cyu.pdb. lyase 26-apr-08 3cyu Zn Xe
  Title: human carbonic anhydrase ii complexed with cryptophane biosensor and xenon
  Author: j. a. aaron, k. m. jude, l. di costanzo, d. w. christianson
  Keywords: sulfonamide, cryptophane, xenon, biosensor, acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
  
• 3cyw.pdb. hydrolase 27-apr-08 3cyw Cl
  Title: effect of flap mutations on structure of hiv-1 protease and inhibition by saquinavir and darunavir
  Author: f. liu, i. t. weber
  Keywords: viral nucleoprotein, virion, zinc, zinc-finger
  
• 3cyx.pdb. hydrolase 27-apr-08 3cyx Na
  Title: crystal structure of hiv-1 mutant i50v and inhibitor saquinavira
  Author: f. liu, i. t. weber
  Keywords: hydrolase
  
• 3cz8.pdb. hydrolase 28-apr-08 3cz8
  Title: crystal structure of putative sporulation-specific glycosylase ydhd from bacillus subtilis
  Author: y. patskovsky, r. romero, m. rutter, s. chang, m. maletic, d. smith, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: sporulation
  
• 3d02.pdb. sugar binding protein 30-apr-08 3d02 Cl Se
  Title: crystal structure of periplasmic sugar-binding protein (yp_001338366.1) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 1.30 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: periplasmic sugar-binding protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, transcription, sugar binding protein
  
• 3d1y.pdb. hydrolase 06-may-08 3d1y Cl Na
  Title: crystal structure of hiv-1 mutant i54v and inhibitor saquina
  Author: f. liu, i. t. weber
  Keywords: rna-directed dna polymerase, transferase, viral nucleoprotein, virion, zinc, zinc-finger
  
• 3d1z.pdb. hydrolase 07-may-08 3d1z Cl
  Title: crystal structure of hiv-1 mutant i54m and inhibitor darunavir
  Author: f. liu, a. y. kovalesky, y. tie, a. k. ghosh, r. w. harrison, i. t. weber
  Keywords: flap mutant, i54m, darunavir, hydrolase
  
• 3d20.pdb. hydrolase 07-may-08 3d20 Cl Na
  Title: crystal structure of hiv-1 mutant i54v and inhibitor darunavia
  Author: f. liu, a. y. kovalesky, y. tie, a. k. ghosh, r. w. harrison, i. t. weber
  Keywords: rna-directed dna polymerase, transferase, viral nucleoprotein, virion, zinc, zinc-finger
  
• 3d33.pdb. structural genomics, unknown function 09-may-08 3d33 Se
  Title: crystal structure of domain of unknown function with an immunoglobulin-like beta-sandwich fold (yp_001297618.1) from bacteroides vulgatus atcc 8482 at 1.70 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: unknown function
  
• 3d3a.pdb. hydrolase 09-may-08 3d3a Se
  Title: crystal structure of a beta-galactosidase from bacteroides thetaiotaomicron
  Author: k. palani, d. kumaran, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
  Keywords: beta-galactosidase, bacteroides thetaiotaomicron, protein structure initiative ii, psi ii, nysgxrc, 11092f, structural genomics, new york structural genomix research consortium, glycosidase, hydrolas...
  
• 3d3r.pdb. chaperone 12-may-08 3d3r Se
  Title: crystal structure of the hydrogenase assembly chaperone hypc/hupf family protein from shewanella oneidensis mr-1
  Author: y. kim, t. skarina, o. onopriyenko, a. m. edwards, a. savchenko, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, chaperone
  
• 3d53.pdb. hydrolase 15-may-08 3d53 Cl
  Title: 2.2 a crystal structure of inorganic pyrophosphatase from rickettsia prowazekii
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: inorganic, pyrophosphatase, seattle structural genomics center for infectious disease, ssgcid, cytoplasm, hydrolase, magnesium, metal-binding
  
• 3d6u.pdb. ligase 20-may-08 3d6u F
  Title: crystal structure of 4-(trifluoromethyldiazirinyl) phenylalanyl-trna synthetase
  Author: w. liu, e. tippmann, a. v. mack, p. g. schultz
  Keywords: aminoacyl-trna synthetase, atp-binding, cytoplasm, ligase, nucleotide- binding, protein biosynthesis
  
• 3d6v.pdb. ligase 20-may-08 3d6v F
  Title: crystal structure of 4-(trifluoromethyldiazirinyl) phenylalanyl-trna synthetase
  Author: w. liu, e. tippmann, a. v. mack, p. g. schultz
  Keywords: aminoacyl-trna synthetase, atp-binding, cytoplasm, ligase, nucleotide- binding, protein biosynthesis