Recent PDB releases or updates: week of 20 November 2009

• 1b0w.pdb. immune system 13-nov-98 1b0w
  Title: structural comparison of amyloidogenic light chain dimer in two crystal forms with nonamyloidogenic counterparts
  Author: n. schormann, m. d. benson
  Keywords: amyloid, immune system
  
• 1es4.pdb. hydrolase 07-apr-00 1es4
  Title: c98n mutant of streptomyces k15 dd-transpeptidase
  Author: e. fonze, p. charlier
  Keywords: dd-transpeptidase, serine peptidase, beta-lactamase, hydrolase carboxypeptidase
  
• 1icl.pdb. de novo protein 02-apr-01 1icl (solution NMR)
  Title: solution structure of designed beta-sheet mini-protein th1ox
  Author: j. j. ottesen, b. imperiali
  
  
• 1jdr.pdb. oxidoreductase 14-jun-01 1jdr K Fe
  Title: crystal structure of a proximal domain potassium binding variant of cytochrome c peroxidase
  Author: c. a. bonagura, m. sundaramoorthy, b. bhaskar, t. l. poulos
  Keywords: oxidoreductase
  
• 1jr2.pdb. lyase 10-aug-01 1jr2
  Title: structure of uroporphyrinogen iii synthase
  Author: m. a. mathews, h. l. schubert, f. g. whitby, k. j. alexander, k. schadick, h. a. bergonia, j. d. phillips, c. p. hill
  Keywords: heam biosynthesis, lyase
  
• 1k4r.pdb. virus 08-oct-01 1k4r (electron microscopy)
  Title: structure of dengue virus
  Author: r. j. kuhn, w. zhang, m. g. rossmann, s. v. pletnev, j. corver, e. lenches, c. t. jones, s. mukhopadhyay, p. r. chipman, e. g. strauss, t. s. baker, j. h. strauss
  Keywords: flaviviridae, dengue virus, glycoprotein e from tick-borne encephalitis virus, icosahedral virus
  
• 1lij.pdb. transferase 17-apr-02 1lij Cl Mg I
  Title: structure of t. gondii adenosine kinase bound to prodrug 2 7-iodotubercidin and amp-pcp
  Author: m. a. schumacher, d. m. scott, i. i. mathews, s. e. ealick, d. s. roos, b. ullman, r. g. brennan
  Keywords: transferase
  
• 1lio.pdb. transferase 17-apr-02 1lio
  Title: structure of apo t. gondii adenosine kinase
  Author: m. a. schumacher, d. m. scott, i. i. mathews, s. e. ealick, r. g. brennan
  Keywords: transferase
  
• 1ne5.pdb. toxin 10-dec-02 1ne5 (solution NMR)
  Title: solution structure of herg specific scorpion toxin cnerg1
  Author: a. m. torres, b. paramjit, p. alewood, p. w. kuchel, j. i. vandenberg
  Keywords: triple-stranded beta-sheet, toxin
  
• 1obp.pdb. odorant-binding protein 14-jan-96 1obp
  Title: odorant-binding protein from bovine nasal mucosa
  Author: m. tegoni, c. cambillau
  Keywords: nose, transport, lipocalin, odorant-binding protein
  
• 1pf3.pdb. oxidoreductase 23-may-03 1pf3 Cl Cu
  Title: crystal structure of the m441l mutant of the multicopper oxidase cueo
  Author: s. a. roberts, g. f. wildner, g. grass, a. weichsel, a. ambrus, c. rensing, w. r. montfort
  Keywords: multicopper oxidase, oxidoreductase
  
• 1qvg.pdb. ribosome 27-aug-03 1qvg Cl Mg K Na Cd
  Title: structure of cca oligonucleotide bound to the trna binding sites of the large ribosomal subunit of haloarcula marismortui
  Author: t. m. schmeing, p. b. moore, t. a. steitz
  Keywords: protein-protein complex, rna-rna complex, protein-rna complex
  
• 1yb4.pdb. oxidoreductase 20-dec-04 1yb4 Se
  Title: crystal structure of the tartronic semialdehyde reductase from salmonella typhimurium lt2
  Author: y. kim, r. wu, f. collart, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: tartronic semialdehyde reductase, oxidoreductase, salmonella typhimurium lt2, psi, protein structure initiative, the midwest center for structural genomics, mcsg
  
• 1yo8.pdb. cell adhesion 26-jan-05 1yo8 Ca Se
  Title: structure of the c-terminal domain of human thrombospondin-2
  Author: c. b. carlson, d. a. bernstein, d. s. annis, t. m. misenheimer, b. a. hannah, d. f. mosher, j. l. keck
  Keywords: cell adhesion
  
• 1ysw.pdb. apoptosis 09-feb-05 1ysw (solution NMR)
  Title: solution structure of the anti-apoptotic protein bcl-2 complexed with an acyl-sulfonamide-based ligand
  Author: t. oltersdorf, s. w. elmore, a. r. shoemaker, r. c. armstrong, d. j. augeri, b. a. belli, m. bruncko, t. l. deckwerth, j. dinges, p. j. hajduk, m. k. joseph, s. kitada, s. j. korsmeyer, a. r. kunzer, a. letai, c. li, m. j. mitten, d. g. nettesheim, s. ng, p. m. nimmer, j. m. o'connor, a. oleksijew, a. m. petros, j. c. reed, w. shen, s. k. tahir, c. b. thompson, k. j. tomaselli, b. wang, m. d. wendt, h. zhang, s. w. fesik, s. h. rosenberg
  Keywords: apoptosis
  
• 1z7m.pdb. transferase 25-mar-05 1z7m W
  Title: atp phosphoribosyl transferase (hiszg atp-prtase) from lactococcus lactis
  Author: k. s. champagne, m. sissler, y. larrabee, s. doublie, c. s. francklyn
  Keywords: histidine biosynthesis, transferase, hiszg, allosteric, evolution
  
• 1z7n.pdb. transferase 25-mar-05 1z7n
  Title: atp phosphoribosyl transferase (hiszg atp-prtase) from lactococcus lactis with bound prpp substrate
  Author: k. s. champagne, m. sissler, y. larrabee, s. doublie, c. s. francklyn
  Keywords: prpp, histidine biosynthesis, transferase, hiszg, allosteric
  
• 2ajq.pdb. transferase,transcription/dna 02-aug-05 2ajq
  Title: structure of replicative dna polymerase provides insigts into the mechanisms for processivity, frameshifting and editing
  Author: l. brieba, t. ellenberger
  Keywords: transferase, transcription/dna complex, transferase, transcription/dna complex
  
• 2be4.pdb. structural genomics, unknown function 21-oct-05 2be4 Se
  Title: x-ray structure an ef-hand protein from danio rerio dr.36843
  Author: g. e. wesenberg, g. n. phillips, b. w. han, e. bitto, c. a. bingman, e. bae, center for eukaryotic structural genomics (cesg)
  Keywords: bc083168, calicium binding, ef-hand superfamily, structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg, unknown function
  
• 2ec7.pdb. viral protein 10-feb-07 2ec7 Zn (solution NMR)
  Title: solution structure of human immunodificiency virus type-2 nucleocapsid protein
  Author: t. matsui, y. kodera, t. tanaka, h. endoh, h. tanaka, e. miyauchi, h. komatsu, t. kohno, t. maeda
  Keywords: hiv-2, rna recognition, zinc finger, viral protein
  
• 2gh6.pdb. hydrolase 26-mar-06 2gh6 F K Zn
  Title: crystal structure of a hdac-like protein with 9,9,9- trifluoro-8-oxo-n-phenylnonan amide bound
  Author: t. k. nielsen, c. hildmann, d. riester, d. wegener, a. schwienhorst, r. ficner
  Keywords: zinc-ion, trifluoromethyl ketone, hydrolase
  
• 2gib.pdb. viral protein 28-mar-06 2gib
  Title: crystal structure of the sars coronavirus nucleocapsid protein dimerization domain
  Author: i. m. yu, m. l. oldham, j. zhang, j. chen
  Keywords: nucleocapsid, dimer, viral protein
  
• 2hhp.pdb. transferase 28-jun-06 2hhp Mg
  Title: structure of yeast poly(a) polymerase in a closed conformation.
  Author: a. bohm, j. toth
  Keywords: transferase
  
• 2iht.pdb. transferase 27-sep-06 2iht Mg Se
  Title: carboxyethylarginine synthase from streptomyces clavuligerus: semet structure
  Author: m. e. caines, c. j. schofield
  Keywords: transferase
  
• 2ihu.pdb. transferase 27-sep-06 2ihu Mg K
  Title: carboxyethylarginine synthase from streptomyces clavuligerus: putative reaction intermediate complex
  Author: m. e. caines, c. j. schofield
  Keywords: transferase
  
• 2ihv.pdb. transferase 27-sep-06 2ihv Mg K
  Title: carboxyethylarginine synthase from streptomyces clavuligerus: 5-guanidinovaleric acid complex
  Author: m. e. caines, c. j. schofield
  Keywords: transferase
  
• 2jk5.pdb. immune system/metal transport 15-aug-08 2jk5 Co K
  Title: potassium channel kcsa in complex with tetrabutylammonium in high k
  Author: m. j. lenaeus, p. j. focia, t. wagner, a. gross
  Keywords: quaternary ammonium, protein-antibody fab complex, ionic channel, ion transport, potassium channel
  
• 2jk8.pdb. cell adhesion 22-aug-08 2jk8 Cl Mg Ni
  Title: type iv secretion system effector protein bepa complexed with a pyrophosphate moiety
  Author: d. palanivelu, t. schirmer
  Keywords: ob fold, fic domain, substrate protein, protein translocation, cell adhesion
  
• 2jky.pdb. transferase 02-sep-08 2jky Mg
  Title: saccharomyces cerevisiae hypoxanthine-guanine phosphoribosyltransferase in complex with gmp (guanosine 5' -monophosphate) (tetragonal crystal form)
  Author: l. moynie, m. f. giraud, a. breton, f. boissier, b. daignan-fornier, a. dautant
  Keywords: cytoplasm, magnesium, gmp complex, flip peptide-plane, glycosyltransferase, transferase, metal-binding, purine salvage
  
• 2jkz.pdb. transferase 02-sep-08 2jkz
  Title: saccharomyces cerevisiae hypoxanthine-guanine phosphoribosyltransferase in complex with gmp (guanosine 5' -monophosphate) (orthorhombic crystal form)
  Author: l. moynie, m. f. giraud, a. breton, f. boissier, b. daignan-fornier, a. dautant
  Keywords: cytoplasm, magnesium, gmp complex, flip peptide-plane, glycosyltransferase, transferase, metal-binding, purine salvage
  
• 2jlk.pdb. cell adhesion 10-sep-08 2jlk
  Title: crystal structure of ncam2 igiv-fn3i
  Author: n. kulahin, k. rasmussen, o. kristensen, j. kastrup, v. berezin, e. bock, p. walmod, m. gajhede
  Keywords: transmembrane, phosphoprotein, superfamily, glycoprotein, cell membrane, immunoglobulin, immunoglobulin domain, cell, neural, membrane, molecule, adhesion
  
• 2jll.pdb. cell adhesion 10-sep-08 2jll Ca
  Title: crystal structure of ncam2 igiv-fn3ii
  Author: n. kulahin, k. rasmussen, o. kristensen, j. kastrup, v. berezin, e. bock, p. walmod, m. gajhede
  Keywords: immunoglobulin superfamily, cell adhesion, transmembrane, phosphoprotein, neural, membrane, glycoprotein, cell membrane
  
• 2jqm.pdb. transferase 03-jun-07 2jqm (solution NMR)
  Title: yellow fever envelope protein domain iii nmr structure (s288-k398)
  Author: d. e. volk, s. h. gandham, f. j. may, a. anderson, a. d. barrett, d. g. gorenstein
  Keywords: asibi strain, nmr structure, transferase
  
• 2k5z.pdb. rna 01-jul-08 2k5z (solution NMR)
  Title: solution structure and dynamics of the apical stem-loop of duck hepatitis b virus
  Author: k. a. m. ampt, m. tessari, s. s. wijmenga
  Keywords: duck, apical loop, epsilon, rna
  
• 2kew.pdb. structural genomics, unknown function 05-feb-09 2kew (solution NMR)
  Title: the solution structure of bacillus subtilis sr211 start domain by nmr spectroscopy
  Author: k. a. mercier, g. a. mueller, r. powers, t. b. acton, m. ciano, c. ho, j. lui, l. ma, b. rost, r. rossi, r. xiao, northeast structural genomics consortium (nesg)
  Keywords: protein yndb, start domain, nmr resonance assignments, lipid binding, structural genomics, unknown function, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2kfd.pdb. nuclear protein 18-feb-09 2kfd (solution NMR)
  Title: prp40 ff4 domain
  Author: r. bonet, l. ruiz, b. morales, m. macias
  Keywords: prp40, saccharomyces cerevisiae, mrna processing, mrna splicing, nucleus, phosphoprotein, ribonucleoprotein, nuclear protein
  
• 2kg5.pdb. signaling protein 05-mar-09 2kg5 (solution NMR)
  Title: nmr solution structure of arap3-sam
  Author: m. leone, m. pellecchia
  Keywords: helix bundle, cell membrane, cell projection, cytoplasm, cytoskeleton, gtpase activation, membrane, metal-binding, phosphoprotein, polymorphism, zinc, zinc- finger, signaling protein
  
• 2ki2.pdb. rna binding protein/ss-dna binding prote20-apr-09 2ki2 (solution NMR)
  Title: solution structure of ss-dna binding protein 12rnp2 precursor, hp0827(o25501_helpy) form helicobacter pylori
  Author: c. ma, j. lee, j. kim, s. park, a. kwon, b. lee
  Keywords: helicobacter pylori, nmr, rrm, rnp1, rnp2, ss-dna binding proteins, rna binding protein/ss-dna binding protein complex
  
• 2kii.pdb. unknown function 05-may-09 2kii Fe (solution NMR)
  Title: nmr structure of the so2144 h-nox domain from shewanella oneidensis in the fe(ii)co ligation state
  Author: w. k. erbil
  Keywords: unknown function
  
• 2kil.pdb. unknown function 06-may-09 2kil Fe (solution NMR)
  Title: nmr structure of the h103g mutant so2144 h-nox domain from shewanella oneidensis in the fe(ii)co ligation state
  Author: w. k. erbil
  Keywords: unknown function
  
• 2kll.pdb. cytokine 06-jul-09 2kll (solution NMR)
  Title: solution structure of human interleukin-33
  Author: a. lingel, w. fairbrother
  Keywords: beta-trefoil, cytokine, polymorphism, secreted
  
• 2kn5.pdb. gene regulation 14-aug-09 2kn5 (solution NMR)
  Title: a correspondence between solution-state dynamics of an individual protein and the sequence and conformational diversity of its family
  Author: g. d. friedland
  Keywords: residual dipolar coupling, backbone flexibility, protein dynamics, cytoplasm, isopeptide bond, nucleus, phosphoprotein, ubl conjugation, gene regulation
  
• 2kow.pdb. dna 02-oct-09 2kow (solution NMR)
  Title: structure of a two-g-tetrad basket-type intramolecular g- quadruplex formed by giardia telomeric repeat d(taggg)4 in k+ solution (with g18-to-ino substitution)
  Author: l. hu, k. w. lim, s. bouaziz, a. t. phan
  Keywords: g-quadruplex, g.(a-g) triad, taggg repeat, dna, giardia
  
• 2kpj.pdb. transcription regulator 16-oct-09 2kpj (solution NMR)
  Title: solution structure of protein sos-response transcriptional repressor, lexa from eubacterium rectale. northeast structural genomics consortium target err9a
  Author: y. wu, a. eletsky, d. lee, a. ghosh, w. buchwald, q. zhang, h. janjua, e. garcia, r. nair, d. sukumaran, b. rost, t. acton, r. xiao, j. everett, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
  Keywords: nesg, gft, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
  
• 2kps.pdb. structural genomics, unknown function 19-oct-09 2kps (solution NMR)
  Title: solution structure of domain iv from the ybbr family protein of desulfitobacterium hafniense
  Author: a. w. barb, h. lee, r. l. belote, c. ciccosanti, k. hamilton, t. b. acton, r. xiao, j. k. everett, g. t. montelione, j. h. prestegard, northeast structural genomics consortium (nesg)
  Keywords: figure eight, figure 8, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2kq4.pdb. immune system 27-oct-09 2kq4 (solid-state NMR)
  Title: atomic resolution protein structure determination by three- dimensional transferred echo double resonance solid-state nuclear magnetic resonance spectroscopy
  Author: a. j. nieuwkoop, b. j. wylie, w. franks, g. j. shah, c. m. rienstra
  Keywords: tedor, solid-state, cell wall, igg-binding protein, peptidoglycan-anchor, secreted, thermostable
  
• 2kq9.pdb. transcription 02-nov-09 2kq9 Zn (solution NMR)
  Title: solution structure of dnak suppressor protein from agrobacterium tumefaciens c58. northeast structural genomics consortium target att12/ontario center for structural proteomics target atc0888
  Author: b. wu, a. yee, c. fares, a. lemak, a. semest, g. t. montelione, c. arrowsmith, northeast structural genomics consortium (nesg), ontario centre for structural proteomics (ocsp)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, ontario centre for structural proteomics, ocsp
  
• 2p5b.pdb. metal binding protein 14-mar-07 2p5b Zn Fe
  Title: the complex structure of jmjd2a and trimethylated h3k36 peptide
  Author: g. zhang, z. chen, j. zang, x. hong, y. shi
  Keywords: jmjc domain, histone demethylase, metal binding protein
  
• 2p70.pdb. attractant 19-mar-07 2p70
  Title: bombyx mori pheromone binding protein bound to bell pepper odorant
  Author: c. l. lautenschlager, j. clardy
  Keywords: liganded, attractant
  
• 2p71.pdb. attractant 19-mar-07 2p71 I
  Title: bombyx mori pheromone binding protein bound to iodohexadecane
  Author: c. l. lautenschlager, j. clardy
  Keywords: binding pocket, liganded, attractant
  
• 2qc3.pdb. transferase 19-jun-07 2qc3
  Title: crystal structure of mcat from mycobacterium tuberculosis
  Author: z. li, y. huang, j. ge, m. bartlam, h. wang, z. rao
  Keywords: transferase
  
• 2qif.pdb. chaperone 04-jul-07 2qif Cu Ca
  Title: crystal structure of a metallochaperone with a tetranuclear cu(i) cluster
  Author: c. west, c. singleton, m. a. kihlken, n. e. le brun, a. m. hemmings
  Keywords: chaperone
  
• 2qio.pdb. unknown function 05-jul-07 2qio Cl
  Title: x-ray structure of enoyl-acyl carrier protein reductase from bacillus anthracis with triclosan
  Author: g. m. klein, b. d. santarsiero, a. d. mesecar
  Keywords: unknown function
  
• 2qvq.pdb. antitumor protein 08-aug-07 2qvq Zn
  Title: human p53 core domain mutant v157f/n235k/n239y
  Author: y. wang, h. luecke
  Keywords: glycoprotein, host-virus interaction, li-fraumeni syndrome, metal- binding, nucleus, phosphorylation, polymorphism, transcription, transcription regulation, ubl conjugation, zinc, antitumor protein
  
• 2rd6.pdb. transferase 21-sep-07 2rd6
  Title: parp complexed with a861695
  Author: c. h. park
  Keywords: adp-ribosylation, dna damage, dna repair, dna-binding, glycosyltransferase, metal-binding, nad, nucleus, phosphorylation, polymorphism, transferase, zinc, zinc-finger
  
• 2rqj.pdb. rna 18-jul-09 2rqj (solution NMR)
  Title: quadruplex structure of an rna aptamer against bovine prion protein
  Author: m. katahira, t. mashima, a. matsugami, f. nishikawa, s. nishikawa
  Keywords: prion, quadruplex, rna
  
• 2v5f.pdb. oxidoreductase 06-oct-08 2v5f
  Title: crystal structure of wild type peptide-binding domain of human type i collagen prolyl 4-hydroxylase.
  Author: m. pekkala, r. hieta, k. kivirikko, j. myllyharju, r. wierenga
  Keywords: glycoprotein, metal-binding, oxidoreductase, iron, vitamin c, tpr repeat, dioxygenase
  
• 2v7s.pdb. unknown function 01-aug-07 2v7s Se
  Title: crystal structure of the putative lipoprotein lppa from mycobacterium tuberculosis
  Author: m. grana, i. miras, a. haouz, n. winter, a. buschiazzo, m. bellinzoni, p. m. alzari
  Keywords: unknown function, putative lipoprotein
  
• 2vl4.pdb. hydrolase 08-jan-08 2vl4 Cl Br
  Title: structural and biochemical evidence for a boat-like transition state in beta-mannosidases
  Author: l. e. tailford, w. a. offen, n. l. smith, c. dumon, c. moreland, j. gratien, m. p. heck, r. v. stick, y. bleriot, a. vasella, h. j. gilbert, g. j. davies
  Keywords: hydrolase, transition state mimic, mannosidase, glycoside hydrolase
  
• 2vxx.pdb. dna-binding protein 14-jul-08 2vxx Zn Fe
  Title: x-ray structure of dpsa from thermosynechococcus elongatus
  Author: s. franceschini, a. ilari
  Keywords: dna-binding protein, dps, oxidation, iron binding, ferroxidase centre
  
• 2vxz.pdb. viral protein 15-jul-08 2vxz Cl Se
  Title: crystal structure of hypothetical protein pyrsv_gp04 from pyrobaculum spherical virus
  Author: l. carter, k. a. johnson, h. liu, s. mcmahon, m. oke, j. h. naismith, m. f. white
  Keywords: pyrsv_gp04, pyrobaculum spherical virus, sspf, orf165a
  
• 2vy3.pdb. cell adhesion 17-jul-08 2vy3 Cl Ni Se
  Title: type iv secretion system effector protein bepa
  Author: d. palanivelu, t. schirmer
  Keywords: ob fold, fic domain, substrate protein, protein translocation, cell adhesion
  
• 2vyx.pdb. flavoprotein 29-jul-08 2vyx Cl Na
  Title: crystal structure of the t. thermophilus dodecin w38f mutant
  Author: l. -o. essen, b. meissner
  Keywords: coenzyme a, flavin dimer, flavoprotein, hypothetical protein, flavin binding protein, protein binding putative storage protein
  
• 2vz4.pdb. transcription 30-jul-08 2vz4
  Title: the n-terminal domain of merr-like protein tipal bound to promoter dna
  Author: m. g. allan, j. stetefeld, t. schirmer
  Keywords: resistance, antibiotic, dna-binding, streptomyces, transcription factor, alternative initiation, transcription regulation, dna, merr, drug, tipal, tipan, tipas, activator
  
• 2vza.pdb. cell adhesion 31-jul-08 2vza
  Title: type iv secretion system effector protein bepa
  Author: m. meury, t. schirmer
  Keywords: ob fold, fic domain, substrate protein, protein translocation, cell adhesion
  
• 2vzb.pdb. metal transport 31-jul-08 2vzb Mg Fe
  Title: a dodecameric thioferritin in the bacterial domain, characterization of the bacterioferritin-related protein from bacteroides fragilis
  Author: g. h. gauss, m. j. young, t. douglas, c. m. lawrence
  Keywords: dpsl, iron, ferritin, oxidative stress, metal transport
  
• 2vzp.pdb. hydrolase 05-aug-08 2vzp Ca
  Title: atomic resolution structure of the c-terminal cbm35 from amycolatopsis orientalis exo-chitosanase csxa
  Author: a. lammerts van bueren, a. b. boraston
  Keywords: family 35, csxa, glucuronic acid, hydrolase
  
• 2vzq.pdb. hydrolase 05-aug-08 2vzq Na Ca
  Title: c-terminal cbm35 from amycolatopsis orientalis exo- chitosanase csxa in complex with digalacturonic acid
  Author: a. lammerts van bueren, a. b. boraston
  Keywords: cbm, family 35, digalacturonic acid, calcium
  
• 2vzr.pdb. hydrolase 05-aug-08 2vzr Ca
  Title: c-terminal cbm35 from amycolatopsis orientalis exo- chitosanase csxa in complex with glucuronic acid
  Author: a. lammerts van bueren, a. b. boraston
  Keywords: cbm, family 35, csxa, glucuronic acid
  
• 2w0f.pdb. immune system/metal transport 14-aug-08 2w0f Co K
  Title: potassium channel kcsa-fab complex with tetraoctylammonium
  Author: m. j. lenaeus, p. j. focia, t. wagner, a. gross
  Keywords: quaternary ammonium, protein-antibody fab complex, ionic channel, ion transport, potassium channel
  
• 2w0k.pdb. immune system 19-aug-08 2w0k
  Title: crystal structure of the recombinant variable domain 6jal2
  Author: e. rudino-pinera, p. gonzalezrubio-garrido, e. horjales
  Keywords: germ line, antibodies, fibrinogenic, immune system
  
• 2w0l.pdb. immune system 19-aug-08 2w0l
  Title: crystal structure of the mutant h8p from the recombinant variable domain 6jal2
  Author: e. rudino-pinera, p. gonzalezrubio-garrido, e. horjales
  Keywords: germ line, antibodies, fibrinogenic, immune system
  
• 2w0v.pdb. transferase 10-oct-08 2w0v
  Title: crystal structure of glmu from haemophilus influenzae in complex with quinazoline inhibitor 1
  Author: i. mochalkin, m. melnick
  Keywords: uridyltransferase
  
• 2w0w.pdb. transferase 10-oct-08 2w0w F
  Title: crystal structure of glmu from haemophilus influenzae in complex with quinazoline inhibitor 2
  Author: i. mochalkin, m. melnick
  Keywords: uridyltransferase
  
• 2w0y.pdb. hydrolase 13-oct-08 2w0y Cl Mg Zn
  Title: h.salinarum alkaline phosphatase
  Author: a. wende, p. johansson, m. grininger, d. oesterhelt
  Keywords: halophilic, alkaline phosphatase
  
• 2w1o.pdb. translation 20-oct-08 2w1o (solution NMR)
  Title: nmr structure of dimerization domain of human ribosomal protein p2
  Author: k. m. lee, s. b. chan, k. h. sze, g. zhu, p. c. shaw, k. b. wong
  Keywords: ribonucleoprotein, ribosome, translation, dimerization, phosphoprotein
  
• 2w1w.pdb. hydrolase 21-oct-08 2w1w Ca
  Title: native structure of a family 35 carbohydrate binding module from clostridium thermocellum
  Author: t. m. gloster, g. j. davies, m. correia, j. prates, c. fontes, h. j. gilbert
  Keywords: uronic acid sugars, hydrolase, clostridium thermocellum, carbohydrate binding module
  
• 2w21.pdb. transferase 21-oct-08 2w21
  Title: crystal structure of the aminoacid kinase domain of the glutamate 5 kinase of escherichia coli.
  Author: i. perez-arellano, f. gil-ortiz, c. marco-marin, j. cervera, v. rubio
  Keywords: proline biosynthesis, amino-acid biosynthesis, kinase, cytoplasm, transferase, glutamate kinaseamino acid kinase family, glutamate kinase
  
• 2w24.pdb. transcription 24-oct-08 2w24
  Title: m. tuberculosis rv3291c complexed to lysine
  Author: t. shrivastava, r. ramachandran
  Keywords: dna-binding, transcription, lysine complex, transcription regulator, transcription regulation
  
• 2w25.pdb. transcription 24-oct-08 2w25
  Title: crystal structure of glu104ala mutant
  Author: t. shrivastava, r. ramachandran
  Keywords: transcription regulation, transcriptional regulator, mutant, rv3291c, glu104ala, dna-binding
  
• 2w29.pdb. transcription 25-oct-08 2w29
  Title: gly102thr mutant of rv3291c
  Author: t. shrivastava, s. dey, r. ravishankar
  Keywords: transcription, mutant, transcrition regulator, transcription regulation
  
• 2w2a.pdb. lyase 27-oct-08 2w2a
  Title: crystal structure of p-coumaric acid decarboxylase from lactobacillus plantarum: structural insights into the active site and decarboxylation catalytic mechanism
  Author: h. rodriguez, i. angulo, b. delasrivas, n. campillo, j. a. paez, r. munoz, j. m. mancheno
  Keywords: active site, coumaric acids, decarboxylation, catalytic mechanism
  
• 2w2b.pdb. lyase 27-oct-08 2w2b
  Title: crystal structure of single point mutant tyr20phe p- coumaric acid decarboxylase from lactobacillus plantarum: structural insights into the active site and decarboxylation catalytic mechanism
  Author: h. rodriguez, i. angulo, b. delasrivas, n. campillo, j. a. paez, r. munoz, j. m. mancheno
  Keywords: active site, coumaric acids, decarboxylation, catalytic mechanism
  
• 2w2k.pdb. oxidoreductase 02-nov-08 2w2k
  Title: crystal structure of the apo forms of rhodotorula graminis d-mandelate dehydrogenase at 1.8a.
  Author: s. g. vachieri, a. r. cole, c. bagneris, d. p. baker, c. a. fewson, a. k. basak
  Keywords: 2-hydroxyacid dehydrogenase, oxidoreductase
  
• 2w2l.pdb. oxidoreductase 02-nov-08 2w2l
  Title: crystal structure of the holo forms of rhodotorula graminis d-mandelate dehydrogenase at 2.5a.
  Author: s. g. vachieri, a. r. cole, c. bagneris, d. p. baker, c. a. fewson, a. k. basak
  Keywords: mandelate dehydrogenase, 2-hydroxyacid dehydrogenase oxidoreductase
  
• 2w37.pdb. transferase 06-nov-08 2w37 Ni
  Title: crystal structure of the hexameric catabolic ornithine transcarbamylase from lactobacillus hilgardii
  Author: b. de las rivas, g. c. fox, i. angulo, h. rodriguez, r. munoz, j. m. mancheno
  Keywords: metal binding-site, hexamer, cytoplasm, ornithine, transferase, arginine metabolism, carbamoyl phosphate
  
• 2w3a.pdb. oxidoreductase 10-nov-08 2w3a
  Title: human dihydrofolate reductase complexed with nadph and trimethoprim
  Author: a. k. w. leung, r. c. reynolds, d. w. borhani
  Keywords: one-carbon metabolism, lipophilic antifolates, nadp, reductase, oxidoreductase
  
• 2w3b.pdb. oxidoreductase 11-nov-08 2w3b K
  Title: human dihydrofolate reductase complexed with nadph and a lipophilic antifolate selective for mycobacterium avium dhfr, 6-((2,5-diethoxyphenyl)aminomethyl)-2,4-diamino-5- methylpyrido(2,3-d)pyrimidine (sri-8686)
  Author: a. k. w. leung, r. c. reynolds, d. w. borhani
  Keywords: one-carbon metabolism, lipophilic antifolates, nadp, reductase, oxidoreductase
  
• 2w3j.pdb. sugar-binding protein 12-nov-08 2w3j Ca
  Title: structure of a family 35 carbohydrate binding module from an environmental isolate
  Author: c. montainer, j. flint, t. m. gloster, j. p. turkenburg, g. j. davies, h. j. gilbert
  Keywords: carbohydrate binding module, family 35, uronic acid sugars
  
• 2w3m.pdb. oxidoreductase 13-nov-08 2w3m
  Title: human dihydrofolate reductase complexed with nadph and folate
  Author: a. k. w. leung, r. c. reynolds, d. w. borhani
  Keywords: one-carbon metabolism, lipophilic antifolates, nadp, reductase, oxidoreductase
  
• 2w3v.pdb. oxidoreductase 16-nov-08 2w3v
  Title: mycobacterium avium dihydrofolate reductase complexed with nadph and trimethoprim
  Author: a. k. w. leung, r. c. reynolds, d. w. borhani
  Keywords: one-carbon metabolism, lipophilic antifolates, nadp, reductase, oxidoreductase
  
• 2w3w.pdb. oxidoreductase 16-nov-08 2w3w
  Title: mycobacterium avium dihydrofolate reductase complexed with nadph and a lipophilic antifolate selective for m. avium dhfr, 6-((2,5-diethoxyphenyl)aminomethyl)-2,4-diamino-5- methylpyrido(2,3-d)pyrimidine (sri-8686)
  Author: a. k. w. leung, r. c. reynolds, d. w. borhani
  Keywords: one-carbon metabolism, lipophilic antifolates, nadp, reductase, oxidoreductase
  
• 2w46.pdb. hydrolase 21-nov-08 2w46 Na Ca
  Title: cbm35 from cellvibrio japonicus abf62
  Author: c. montainer, a. lammerts van bueren, c. dumon, j. e. flint, m. a. correia, j. a. prates, s. firbank, r. j. lewis, g. g. grondin, m. g. ghinet, t. m. gloster, c. herve, j. p. knox, b. g. talbot, j. p. turkenburg, j. kerovuo, r. brzezinski, c. m. g. a. fontes, g. j. davies, a. b. boraston , h. j. gilbert
  Keywords: carbohydrate binding module, hydrolase
  
• 2w47.pdb. hydrolase 21-nov-08 2w47 Ca
  Title: clostridium thermocellum cbm35 in complex with delta-4,5- anhydrogalacturonic acid
  Author: c. montainer, a. lammerts van bueren, c. dumon, j. e. flint, m. a. correia, j. a. prates, s. firbank, r. j. lewis, g. g. grondin, m. g. ghinet, t. m. gloster, c. herve, j. p. knox, b. g. talbot, j. p. turkenburg, j. kerovuo, r. brzezinski, c. m. g. a. fontes, g. j. davies, a. b. boraston , h. j. gilbert
  Keywords: carbohydrate binding module, anhydrogalacturonic acid hydrolase
  
• 2w87.pdb. hydrolase 14-jan-09 2w87 Ca
  Title: xyl-cbm35 in complex with glucuronic acid containing disaccharide.
  Author: c. montainer, a. l. v. bueren, c. dumon, j. e. flint, m. a. correia, j. a. prates, s. j. firbank, r. j. lewis, g. g. grondin, m. g. ghinet, t. m. gloster, c. herve, j. p. knox, b. g. talbot, j. p. turkenburg, j. kerovuo, r. brzezinski, c. m. g. a. fontes, g. j. davies, a. b. boraston, h. j. gilbert
  Keywords: carbohydrate protein binding, xylan, cmb35, glucuronic acid, hydrolase
  
• 2w89.pdb. rna 15-jan-09 2w89
  Title: crystal structure of the e.coli trnaarg aminoacyl stem issoacceptor rr-1660 at 2.0 angstroem resolution
  Author: a. eichert, a. schreiber, j. p. fuerste, m. perbandt, c. betzel, v. a. erdmann, c. foerster
  Keywords: rna, trnaarg, hydration, trna identity
  
• 2whw.pdb. oxidoreductase 07-may-09 2whw Fe
  Title: selective oxidation of carbolide c-h bonds by engineered macrolide p450 monooxygenase
  Author: s. li, m. r. chaulagain, a. r. knauff, l. m. podust, j. montgomery, d. h. sherman
  Keywords: cyp107l1, cytochrome p450, heme, iron, macrolide monooxygenase, metal-binding, monooxygenase, oxidoreductase, oxidoreductase antibiotic biosynthesis, pikc
  
• 2wk3.pdb. hydrolase 05-jun-09 2wk3 Zn
  Title: crystal structure of human insulin-degrading enzyme in complex with amyloid-beta (1-42)
  Author: q. guo, w. j. tang
  Keywords: metal-binding, metalloprotease, ide, zinc, protease, hydrolase, cytoplasm, amyloid-beta (1-42)
  
• 2wl1.pdb. signaling protein 19-jun-09 2wl1
  Title: pyrin pryspry domain
  Author: c. weinert, p. r. mittl, m. g. gruetter
  Keywords: polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein, disease mutation, pryspry
  
• 2wp0.pdb. dna binding protein 31-jul-09 2wp0 Cl Na
  Title: crystal structure of a hoba-dnaa (domain i-ii) complex from helicobacter pylori.
  Author: g. natrajan, m. -f. noirot-gros, a. zawilak-pawlik, u. kapp, l. terradot
  Keywords: nucleotide-binding, dna replication initiation, diaa, hoba, dnaa, atp-binding
  
• 2wrn.pdb. ribosome 01-sep-09 2wrn Mg Zn
  Title: the crystal structure of the 70s ribosome bound to ef-tu and trna (part 1 of 4).
  Author: t. m. schmeing, r. m. voorhees, v. ramakrishnan
  Keywords: ribonucleoprotein, nucleotide-binding, protein biosynthesis, translation, zinc-finger, rna-binding, rrna-binding, metal-binding, elongation factor, trna, ef-tu, gtpase, ribosome, decoding
  
• 2wro.pdb. ribosome 01-sep-09 2wro
  Title: the crystal structure of the 70s ribosome bound to ef-tu and trna (part 2 of 4).
  Author: t. m. schmeing, r. m. voorhees, v. ramakrishnan
  Keywords: elongation factor g, translocation, translation, protein synthesis, ef-tu, gtpase
  
• 2wrq.pdb. ribosome 01-sep-09 2wrq Mg Zn
  Title: the crystal structure of the 70s ribosome bound to ef-tu and trna (part 3 of 4).
  Author: t. m. schmeing, r. m. voorhees, v. ramakrishnan
  Keywords: ribonucleoprotein, nucleotide-binding, protein biosynthesis, translation, zinc-finger, rna-binding, rrna-binding, metal-binding, elongation factor, trna, ef-tu, gtpase, ribosome, decoding
  
• 2wrr.pdb. ribosome 01-sep-09 2wrr
  Title: the crystal structure of the 70s ribosome bound to ef-tu and trna (part 4 of 4).
  Author: t. m. schmeing, r. m. voorhees, v. ramakrishnan
  Keywords: elongation factor g, translocation, translation, protein synthesis, ef-tu, gtpase
  
• 2wrz.pdb. transport protein 03-sep-09 2wrz
  Title: crystal structure of an arabinose binding protein with designed serotonin binding site in open, ligand-free state
  Author: b. schreier, c. stumpp, s. wiesner, b. hocker
  Keywords: arabinose binding protein, periplasmic binding protein, abp, transport protein, periplasm, receptor design
  
• 2wsc.pdb. photosynthesis 04-sep-09 2wsc Mg Fe
  Title: improved model of plant photosystem i
  Author: a. amunts, h. toporik, a. borovikov, n. nelson
  Keywords: electron transfer, membrane proteins, large complexes
  
• 2wse.pdb. photosynthesis 05-sep-09 2wse Mg Fe
  Title: improved model of plant photosystem i
  Author: a. amunts, h. toporik, a. borovikov, n. nelson
  Keywords: electron transfer, membrane proteins, large complexes
  
• 2wsf.pdb. photosynthesis 05-sep-09 2wsf Mg Fe
  Title: improved model of plant photosystem i
  Author: a. amunts, h. toporik, a. borovikov, n. nelson
  Keywords: electron transfer, membrane proteins, large complexes
  
• 2wss.pdb. hydrolase 09-sep-09 2wss Mg Se
  Title: the structure of the membrane extrinsic region of bovine atp synthase
  Author: d. m. rees, a. g. w. leslie, j. e. walker
  Keywords: atp synthesis, phosphoprotein, ubl conjugation, transit peptide, nucleotide-binding, acetylation, atp-binding, ion transport, mitochondrion, pyrrolidone carboxylic acid, hydrolase, transport
  
• 2wv4.pdb. hydrolase/peptide 13-oct-09 2wv4
  Title: crystal structure of foot-and-mouth disease virus 3c protease in complex with a decameric peptide corresponding to the vp1-2a cleavage junction
  Author: p. a. zunszain, s. r. knox, t. r. sweeney, j. yang, n. roque-rosell, g. j. belsham, r. j. leatherbarrow, s. curry
  Keywords: 3c protease, hydrolase, viral protein
  
• 2wv5.pdb. hydrolase/peptide 13-oct-09 2wv5
  Title: crystal structure of foot-and-mouth disease virus 3c protease in complex with a decameric peptide corresponding to the vp1-2a cleavage junction with a gln to glu substitution at p1
  Author: p. a. zunszain, s. r. knox, t. r. sweeney, j. yang, n. roque-rosell, g. j. belsham, r. j. leatherbarrow, s. curry
  Keywords: hydrolase, viral protein, hydrolase peptide complex
  
• 2wwu.pdb. metal-binding protein 29-oct-09 2wwu Ni
  Title: crystal structure of the catalytic domain of phd finger protein 8
  Author: w. w. yue, v. hozjan, c. cooper, a. tumber, t. krojer, j. muniz, c. allerston, e. salah, m. a. mcdonough, f. vondelft, c. arrowsmith, j. weigelt, a. edwards, c. bountra, c. j. schofield, k. l. kavanagh, u. oppermann
  Keywords: epigenetics, metal-binding protein, histone demethylase
  
• 2www.pdb. transport protein 30-oct-09 2www
  Title: crystal structure of methylmalonic acidemia type a protein
  Author: j. r. c. muniz, c. gileadi, s. froese, w. w. yue, a. c. w. pike, f. vondelft, g. kochan, r. sethi, a. chaikuad, e. pilka, s. picaud, c. phillips, k. guo, e. krysztofinska, j. bray, n. burgess-brown, c. h. arrowsmith, j. weigelt, a. edwards, c. bountra, r. a. gravel, k. l. kavanagh, u. oppermann
  Keywords: transit peptide, disease mutation, nucleotide-binding, atp-binding, mitochondrion
  
• 2wxc.pdb. transferase 06-nov-09 2wxc (solution NMR)
  Title: the folding mechanism of bbl: plasticity of transition- state structure observed within an ultrafast folding protein family.
  Author: h. neuweiler, t. d. sharpe, t. j. rutherford, c. m. johnson, m. d. allen, n. ferguson, a. r. fersht
  Keywords: transferase, acyltransferase
  
• 2wxt.pdb. hydrolase 10-nov-09 2wxt Zn Ca Cd
  Title: clostridium perfringens alpha-toxin strain nctc8237
  Author: n. justin, c. e. naylor, a. k. basak
  Keywords: hydrolase, hemolysis, metal-binding, ca and membrane binding, gangrene determinant, zinc phospholipase c, zinc, toxin, calcium, secreted, c2 domain, virulence
  
• 2wxu.pdb. hydrolase 10-nov-09 2wxu Zn Ca Cd
  Title: clostridium perfringens alpha-toxin strain nctc8237 mutant t74i
  Author: s. vachieri, c. e. naylor, a. k. basak
  Keywords: hydrolase, hemolysis, metal-binding, ca and membrane binding, gangrene determinant, zinc phospholipase c, zinc, toxin, calcium, secreted, c2 domain, virulence
  
• 2zon.pdb. oxidoreductase/electron transport 27-may-08 2zon Cu Fe
  Title: crystal structure of electron transfer complex of nitrite reductase with cytochrome c
  Author: m. nojiri, h. koteishi, k. yamaguchi, s. suzuki
  Keywords: electron transfer, denitrification, oxidoreductase/electron transport complex
  
• 2ztw.pdb. oxidoreductase 10-oct-08 2ztw Mg
  Title: structure of 3-isopropylmalate dehydrogenase in complex with the inhibitor and nad+
  Author: e. nango, t. kumasaka, t. eguchi
  Keywords: ipmdh, decarboxylating dehydrogenase, leucine biosynthesis, amino-acid biosynthesis, branched-chain amino acid biosynthesis, cytoplasm, magnesium, manganese, metal-binding, nad, oxidoreductase
  
• 2zw2.pdb. ligase 27-nov-08 2zw2
  Title: crystal structure of formylglycinamide ribonucleotide amidotransferase iii from sulfolobus tokodaii (stpurs)
  Author: s. suzuki, s. tamura, k. okada, s. baba, t. kumasaka, n. nakagawa, r. masui, s. kuramitsu, g. sampei, g. kawai
  Keywords: ligase
  
• 3a0r.pdb. transferase 24-mar-09 3a0r Hg Se
  Title: crystal structure of histidine kinase thka (tm1359) in complex with response regulator protein trra (tm1360)
  Author: s. yamada, h. sugimoto, m. kobayashi, a. ohno, h. nakamura, y. shiro
  Keywords: pas fold, kinase, phosphoprotein, transferase, two-component regulatory system
  
• 3a0s.pdb. transferase 24-mar-09 3a0s
  Title: pas domain of histidine kinase thka (tm1359)
  Author: s. yamada, h. sugimoto, m. kobayashi, a. ohno, h. nakamura, y. shiro
  Keywords: kinase, phosphoprotein, transferase, two-component regulatory system
  
• 3a0t.pdb. transferase 24-mar-09 3a0t Mg
  Title: catalytic domain of histidine kinase thka (tm1359) in complex with adp and mg ion (trigonal)
  Author: s. yamada, h. sugimoto, m. kobayashi, a. ohno, h. nakamura, y. shiro
  Keywords: kinase, phosphoprotein, transferase, two-component regulatory system
  
• 3a0u.pdb. signaling protein 24-mar-09 3a0u Mg F Be
  Title: crystal structure of response regulator protein trra (tm1360) from thermotoga maritima in complex with mg(2+)- bef (wild type)
  Author: s. yamada, h. sugimoto, m. kobayashi, a. ohno, h. nakamura, y. shiro
  Keywords: signaling protein
  
• 3a0v.pdb. transferase 24-mar-09 3a0v Se
  Title: pas domain of histidine kinase thka (tm1359) (semet, f486m/f489m)
  Author: s. yamada, h. sugimoto, m. kobayashi, a. ohno, h. nakamura, y. shiro
  Keywords: kinase, phosphoprotein, transferase, two-component regulatory system
  
• 3a0w.pdb. transferase 24-mar-09 3a0w Hg
  Title: catalytic domain of histidine kinase thka (tm1359) for mad phasing (nucleotide free form 2, orthorombic)
  Author: s. yamada, h. sugimoto, m. kobayashi, a. ohno, h. nakamura, y. shiro
  Keywords: kinase, phosphoprotein, transferase, two-component regulatory system
  
• 3a0x.pdb. transferase 25-mar-09 3a0x
  Title: catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 1: ammomium phosphate, monoclinic)
  Author: s. yamada, h. sugimoto, m. kobayashi, a. ohno, h. nakamura, y. shiro
  Keywords: kinase, phosphoprotein, transferase, two-component regulatory system
  
• 3a0y.pdb. transferase 25-mar-09 3a0y
  Title: catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 3: 1,2-propanediol, orthorombic)
  Author: s. yamada, h. sugimoto, m. kobayashi, a. ohno, h. nakamura, y. shiro
  Keywords: kinase, phosphoprotein, transferase, two-component regulatory system
  
• 3a0z.pdb. transferase 25-mar-09 3a0z
  Title: catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 4: isopropanol, orthorombic)
  Author: s. yamada, h. sugimoto, m. kobayashi, a. ohno, h. nakamura, y. shiro
  Keywords: kinase, phosphoprotein, transferase, two-component regulatory system
  
• 3a10.pdb. signaling protein 25-mar-09 3a10 Mg F Be Se
  Title: crystal structure of response regulator protein trra (tm1360) from thermotoga maritima in complex with mg(2+)- bef (semet, l89m)
  Author: s. yamada, h. sugimoto, m. kobayashi, a. ohno, h. nakamura, y. shiro
  Keywords: signaling protein
  
• 3a15.pdb. lyase 26-mar-09 3a15 Fe
  Title: crystal structure of substrate-free form of aldoxime dehydratase (oxdre)
  Author: h. sawai, h. sugimoto, y. kato, y. asano, y. shiro, s. aono
  Keywords: heme protein, lyase
  
• 3a16.pdb. lyase 26-mar-09 3a16 Mg Fe
  Title: crystal structure of aldoxime dehydratase (oxdre) in complex with propionaldoxime
  Author: h. sawai, h. sugimoto, y. kato, y. asano, y. shiro, s. aono
  Keywords: heme protein, lyase
  
• 3a17.pdb. lyase 26-mar-09 3a17 Fe
  Title: crystal structure of aldoxime dehydratase (oxdre) in complex with butyraldoxime (co-crystal)
  Author: h. sawai, h. sugimoto, y. kato, y. asano, y. shiro, s. aono
  Keywords: heme protein, lyase
  
• 3a18.pdb. lyase 26-mar-09 3a18 Fe
  Title: crystal structure of aldoxime dehydratase (oxdre) in complex with butyraldoxime (soaked crystal)
  Author: h. sawai, h. sugimoto, y. kato, y. asano, y. shiro, s. aono
  Keywords: heme protein, lyase
  
• 3a1y.pdb. ribosomal protein 25-apr-09 3a1y
  Title: the structure of protein complex
  Author: t. naganuma, m. yao, n. nomura, j. yu, t. uchiumi, i. tanaka
  Keywords: ribosomal protein,helix spin, ribonucleoprotein
  
• 3a5c.pdb. hydrolase 06-aug-09 3a5c
  Title: inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic v1-atpase
  Author: n. numoto, y. hasegawa, k. takeda, k. miki
  Keywords: asymmetric, crystal structure, rotation, vacuolar type, hydrolase, atp synthesis, atp-binding, hydrogen ion transport, ion transport, nucleotide-binding, transport
  
• 3a5d.pdb. hydrolase 06-aug-09 3a5d
  Title: inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic v1-atpase
  Author: n. numoto, y. hasegawa, k. takeda, k. miki
  Keywords: asymmetric, crystal structure, rotation, vacuolar type, hydrolase, atp synthesis, atp-binding, hydrogen ion transport, ion transport, nucleotide-binding, transport
  
• 3a5t.pdb. transcription regulator/dna 11-aug-09 3a5t Mg Se
  Title: crystal structure of mafg-dna complex
  Author: h. kurokawa, h. motohashi, s. sueno, m. kimura, h. takagawa, y. kanno, m. yamamoto, t. tanaka
  Keywords: bzip factor, acetylation, dna-binding, isopeptide bond, nucleus, repressor, transcription, transcription regulation, ubl conjugation, transcription regulator/dna complex
  
• 3bm0.pdb. dna 11-dec-07 3bm0 Se
  Title: structure of dna octamer g(duse)g(5-sedu)acac
  Author: j. jiang, j. sheng, a. e. hassan, z. huang
  
  
• 3c2t.pdb. hydrolase 25-jan-08 3c2t Mg
  Title: evolution of chlorella virus dutpase
  Author: m. yamanishi, k. homma, y. zhang, l. v. j. etten, h. moriyama
  Keywords: hydrolase
  
• 3c3i.pdb. hydrolase 28-jan-08 3c3i Mg
  Title: evolution of chlorella virus dutpase
  Author: m. yamanishi, k. homma, y. zhang, l. v. j. etten, h. moriyama
  Keywords: hydrolase
  
• 3ca9.pdb. hydrolase 19-feb-08 3ca9 Mg
  Title: evolution of chlorella virus dutpase
  Author: m. yamanishi, k. homma, y. zhang, l. v. j. etten, h. moriyama
  Keywords: hydrolase
  
• 3ck6.pdb. structural protein 14-mar-08 3ck6 Cl Se
  Title: crystal structure of zntb cytoplasmic domain from vibrio parahaemolyticus rimd 2210633
  Author: k. tan, a. sather, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: zntb, cytoplasmic domain, vibrio parahaemolyticus rimd 2210633, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, structural protein
  
• 3ctk.pdb. hydrolase 14-apr-08 3ctk
  Title: crystal structure of the type 1 rip bouganin
  Author: s. fermani, g. tosi, g. falini, a. ripamonti, v. farini, a. bolognesi, l. polito
  Keywords: hydrolase
  
• 3d39.pdb. immune system 09-may-08 3d39 F
  Title: the complex between tcr a6 and human class i mhc hla-a2 with the modified htlv-1 tax (y5(4-fluorophenylalanine)) peptide
  Author: o. y. borbulevych, j. r. clemens, b. m. baker
  Keywords: ubl conjugation, disease mutation, glycation, immunoglobulin domain, pyrrolidone carboxylic acid, secreted, immune system
  
• 3d3v.pdb. immune system 12-may-08 3d3v F
  Title: the complex between tcr a6 and human class i mhc hla-a2 with the modified htlv-1 tax (y5(3,4-difluorophenylalanine)) peptide
  Author: o. y. borbulevych, j. r. clemens, b. m. baker
  Keywords: transmembrane, ubl conjugation, immunoglobulin domain, secreted, disease mutation, glycation, pyrrolidone carboxylic acid, immune system
  
• 3ere.pdb. dna binding protein/dna 01-oct-08 3ere
  Title: crystal structure of the arginine repressor protein from mycobacterium tuberculosis in complex with the dna operator
  Author: l. t. cherney, m. m. cherney, c. r. garen, g. j. lu, m. n. james, tb structural genomics consortium (tbsgc)
  Keywords: arginine biosynthesis, cytoplasm, dna-binding, transcription, transcription regulation, dna binding protein/dna complex
  
• 3esn.pdb. hormone 06-oct-08 3esn Br
  Title: human transthyretin (ttr) complexed with n-(3,5-dibromo-4- hydroxyphenyl)-2,6-dimethylbenzamide
  Author: s. connelly, i. a. wilson
  Keywords: growth factor, amyloid, disease mutation, gamma- carboxyglutamic acid, glycoprotein, polymorphism, polyneuropathy, retinol-binding, secreted, thyroid hormone, transport, vitamin a
  
• 3eso.pdb. hormone 06-oct-08 3eso Cl Br
  Title: human transthyretin (ttr) complexed with n-(3,5-dibromo-4- hydroxyphenyl)-2,5-dichlorobenzamide
  Author: s. connelly, i. a. wilson
  Keywords: growth factor, amyloid, disease mutation, gamma- carboxyglutamic acid, glycoprotein, polymorphism, polyneuropathy, retinol-binding, secreted, thyroid hormone, transport, vitamin a
  
• 3esp.pdb. hormone 06-oct-08 3esp Br
  Title: human transthyretin (ttr) complexed with n-(3,5-dibromo-4- hydroxyphenyl)-3,5-dimethyl-4-hydroxybenzamide
  Author: s. connelly, i. a. wilson
  Keywords: growth factor, amyloid, disease mutation, gamma- carboxyglutamic acid, glycoprotein, polymorphism, polyneuropathy, retinol-binding, secreted, thyroid hormone, transport, vitamin a
  
• 3exi.pdb. oxidoreductase 16-oct-08 3exi Cl K
  Title: crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex with the subunit-binding domain (sbd) of e2p, but sbd cannot be modeled into the electron density
  Author: m. kato, r. m. wynn, j. l. chuang, s. -c. tso, m. machius, j. li, d. t. chuang
  
  
• 3f28.pdb. hydrolase 29-oct-08 3f28 Zn Ca
  Title: thermolysin inhibition
  Author: l. englert, a. heine, g. klebe
  Keywords: calcium, hydrolase, metal-binding, metalloprotease, protease, secreted, zinc, zymogen
  
• 3f2p.pdb. hydrolase 30-oct-08 3f2p Zn Ca
  Title: thermolysin inhibition
  Author: l. englert, a. heine, g. klebe
  Keywords: calcium, hydrolase, metal-binding, metalloprotease, protease, secreted, zinc, zymogen
  
• 3f6j.pdb. sugar binding protein 06-nov-08 3f6j
  Title: f17a-g lectin domain with bound glcnac(beta1-3)gal
  Author: l. buts, a. de boer, j. d. m. olsson, w. jonckheere, m. de kerpel, e. de genst, y. guerardel, r. willaert, l. wyns, m. wuhrer, s. oscarson, h. de greve, j. bouckaert
  Keywords: lectin, bacterial attachment, pathogenesis, immunoglobulin fold, cell projection, fimbrium, sugar binding protein
  
• 3f7m.pdb. hydrolase 09-nov-08 3f7m
  Title: crystal structure of apo cuticle-degrading protease (ver112) from verticillium psalliotae
  Author: l. liang, z. lou, f. ye, z. meng, z. rao, k. zhang
  Keywords: verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, protease, secreted, serine protease, zymogen
  
• 3f7o.pdb. hydrolase 10-nov-08 3f7o Ca
  Title: crystal structure of cuticle-degrading protease from paecilomyces lilacinus (pl646)
  Author: l. liang, z. lou, z. meng, z. rao, k. zhang
  Keywords: cuticle-degrading protease, paecilomyces lilacinus, hydrolase, protease, serine protease
  
• 3f81.pdb. hydrolase 11-nov-08 3f81
  Title: interaction of vhr with sa3
  Author: s. wu, t. mutelin, l. tautz
  Keywords: protein dual-specificity phosphatase, inhibitor, protein phosphatase
  
• 3f8l.pdb. transcription 12-nov-08 3f8l
  Title: crystal structure of the effector domain of phnf from mycobacterium smegmatis
  Author: j. n. busby, s. gebhard, g. m. cook, e. n. baker, s. j. lott, v. a. money
  Keywords: gntr, hutc, transcription, regulator, utra, dna- binding, transcription regulation
  
• 3f8m.pdb. transcription 12-nov-08 3f8m
  Title: crystal structure of phnf from mycobacterium smegmatis
  Author: j. n. busby, s. gebhard, g. m. cook, s. j. lott, e. n. baker, v. a. money
  Keywords: gntr, hutc, transcription, regulator, winged helix- turn-helix, utra, dna-binding, transcription regulation
  
• 3f90.pdb. electron transport 13-nov-08 3f90
  Title: desulfovibrio desulfuricans (atcc 29577) semiquinone flavodoxin
  Author: m. guelker, y. shamoo
  Keywords: fmn binding, semiquinone, electron transport, flavoprotein, fmn, transport
  
• 3f93.pdb. hydrolase 13-nov-08 3f93 Na Ca
  Title: crystal structure of exo-1,3/1,4-beta-glucanase (exop) from pseudoalteromonas sp. bb1
  Author: y. nakatani, s. m. cutfield, j. f. cutfield
  Keywords: (alpha/beta)6 sheet, beta-sandwich, hydrolase
  
• 3f94.pdb. hydrolase 13-nov-08 3f94 K Na Ca
  Title: crystal structure of truncated exo-1,3/1,4-beta-glucanase (exop) from pseudoalteromonas sp. bb1
  Author: y. nakatani, s. m. cutfield, j. f. cutfield
  Keywords: (alpha/beta)6 sheet, hydrolase
  
• 3f95.pdb. hydrolase 13-nov-08 3f95 Cl
  Title: crystal structure of extra c-terminal domain (x) of exo-1, 3/1,4-beta-glucanase (exop) from pseudoalteromonas sp. bb1
  Author: y. nakatani, s. m. cutfield, j. f. cutfield
  Keywords: hydrolase
  
• 3fcy.pdb. hydrolase 24-nov-08 3fcy Ca
  Title: crystal structure of acetyl xylan esterase 1 from thermoanaerobacterium sp. jw/sl ys485
  Author: i. krastanova, a. cassetta, d. lamba
  Keywords: carbohydrate esterase, ce7, thermoanaerobacterium sp.
  
• 3fh4.pdb. hydrolase 08-dec-08 3fh4 Zn Na
  Title: crystal structure of recombinant vibrio proteolyticus aminopeptidase
  Author: w. yong, j. -j. p. kim, m. hartley, b. bennett
  Keywords: crystal structure, aminopeptidase, hydrolase, metal-binding, protease, secreted, zinc, zymogen
  
• 3fo0.pdb. immune system 27-dec-08 3fo0
  Title: crystal structure of hapten complex of catalytic elimination antibody 13g5 (wild-type)
  Author: e. w. debler, i. a. wilson
  Keywords: catalytic antibody, chimeric fab, hapten complex, acid base catalysis, proton transfer, immunoglobulin domain, immune system
  
• 3fo1.pdb. immune system 27-dec-08 3fo1
  Title: crystal structure of hapten complex of catalytic elimination antibody 13g5 (glu(l39)ala mutant)
  Author: e. w. debler, i. a. wilson
  Keywords: catalytic antibody, chimeric fab, hapten complex, acid base catalysis, proton transfer, immunoglobulin domain, immune system
  
• 3fo2.pdb. immune system 27-dec-08 3fo2
  Title: crystal structure of hapten complex of catalytic elimination antibody 13g5 (glu(l39)gln mutant)
  Author: e. w. debler, i. a. wilson
  Keywords: catalytic antibody, chimeric fab, hapten complex, acid base catalysis, proton transfer, immunoglobulin domain, immune system
  
• 3fp5.pdb. lipid binding protein 04-jan-09 3fp5 Zn
  Title: crystal structure of acbp from moniliophthora perniciosa
  Author: p. s. monzani, h. m. pereira, f. a. melo, f. v. meirelles, g. oliva, j. c. m. cascardo
  Keywords: moniliophthora perniciosa, cacao disease, fatty acid metabolism, lipid binding protein
  
• 3fuo.pdb. hydrolase 14-jan-09 3fuo
  Title: the crystal structure of receptor binding domain of botulinum neurotoxin serotype a
  Author: z. fu, c. chen, j. t. barbieri, j. -j. p. kim, m. r. baldwin
  Keywords: ganglioside binding, hydrolase, membrane, metal-binding, metalloprotease, neurotoxin, pharmaceutical, protease, secreted, toxin, transmembrane, zinc
  
• 3fuq.pdb. toxin 14-jan-09 3fuq
  Title: glycosylated sv2 and gangliosides as dual receptors for botulinum neurotoxin serotype f
  Author: z. fu, c. chen, j. t. barbieri, j. -j. p. kim, m. r. baldwin
  Keywords: ganglioside, sv2, receptor binding, neurotoxin
  
• 3fy7.pdb. transport protein 22-jan-09 3fy7
  Title: crystal structure of homo sapiens clic3
  Author: d. r. littler, p. m. g. curmi, s. n. breit, a. perrakis
  Keywords: glutathione, clic, chloride channel, chloride intracel, chloride, cytoplasm, ion transport, ionic channel, nucleus, polymorphism, transport, voltage-gated channel
  
• 3fz9.pdb. oxidoreductase 24-jan-09 3fz9
  Title: crystal structure of poplar glutaredoxin s12 in complex with glutathione
  Author: c. didierjean, c. corbier, c. s. koh, n. rouhier, j. p. jacquot
  Keywords: oxidoreductase
  
• 3fza.pdb. oxidoreductase 24-jan-09 3fza
  Title: crystal structure of poplar glutaredoxin s12 in complex with glutathione and beta-mercaptoethanol
  Author: c. didierjean, c. corbier, c. s. koh, n. rouhier, j. p. jacquot
  Keywords: oxidoreductase
  
• 3g0q.pdb. hydrolase/dna 28-jan-09 3g0q Fe Ca
  Title: crystal structure of muty bound to its inhibitor dna
  Author: s lee, g. l. verdine
  Keywords: dna glycosylase, 8-oxoguanine, protein-dna complex, adenine glycosylase, dna repair, glycosidase, hydrolase, hydrolase/dna complex
  
• 3g8k.pdb. immune system 12-feb-09 3g8k
  Title: crystal structure of murine natural killer cell receptor, ly49l4
  Author: s. cho
  Keywords: receptor, immune system
  
• 3g8l.pdb. immune system 12-feb-09 3g8l
  Title: crystal structure of murine natural killer cell receptor, ly49l4
  Author: s. cho
  Keywords: ly49, receptor, immune system
  
• 3gb7.pdb. membrane protein 18-feb-09 3gb7 Ni
  Title: potassium channel kcsa-fab complex in li+
  Author: a. n. thompson, k. ilsoo, t. d. panosian, t. m. iverson, t. w. allen, c. m. nimigean
  Keywords: transport, voltage-gated channel
  
• 3gib.pdb. rna binding protein/rna 05-mar-09 3gib
  Title: crystal stucture of the complex of the e. coli hfq with poly(a)
  Author: t. m. link, p. valentin-hansen, r. g. brennan
  Keywords: hfq-rna complex, degradosome component, dna-binding, rna-binding, stress response, rna binding protein/rna complex
  
• 3gw9.pdb. oxidoreductase 31-mar-09 3gw9 Cl Fe
  Title: crystal structure of sterol 14-alpha demethylase (cyp51) from trypanosoma brucei bound to an inhibitor n-(1-(2,4- dichlorophenyl)-2-(1h-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3, 4-oxaziazol-2-yl)benzamide
  Author: g. i. lepesheva, t. y. hargrove, j. harp, z. wawrzak, m. r. waterman
  Keywords: cyp51, cytochrome p450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum, iron, heme-thiolate protein
  
• 3h0e.pdb. hydrolase 09-apr-09 3h0e
  Title: 3,4-dihydropyrimido(1,2-a)indol-10(2h)-ones as potent non- peptidic inhibitors of caspase-3
  Author: w. xu
  Keywords: protein-inhibitor complex, apoptosis, cytoplasm, hydrolase, phosphoprotein, polymorphism, protease, s- nitrosylation, thiol protease, zymogen
  
• 3h17.pdb. hydrolase 11-apr-09 3h17
  Title: crystal structure of este5-pmsf (i)
  Author: k. y. hwang, k. h. nam
  Keywords: este5, esterase, lipase, hydrolase, pmsf, phenylmethylsulfonyl fluoride
  
• 3h18.pdb. hydrolase 11-apr-09 3h18
  Title: crystal structure of este5-pmsf (ii)
  Author: k. y. hwang, k. h. nam
  Keywords: este5, esterase, lipase, hydrolase, pmsf, phenylmethylsulfonyl fluoride
  
• 3h7j.pdb. biosynthetic protein 27-apr-09 3h7j Co Fe
  Title: crystal structure of bacb, an enzyme involved in bacilysin synthesis, in monoclinic form
  Author: m. rajavel, b. gopal
  Keywords: ywfc, bacilysin synthesis, anticapsin synthesis, bi- cupin, double stranded beta helix, antibiotic biosynthesis, biosynthetic protein
  
• 3h7y.pdb. biosynthetic protein 28-apr-09 3h7y Co Fe
  Title: crystal structure of bacb, an enzyme involved in bacilysin synthesis, in tetragonal form
  Author: m. rajavel, b. gopal
  Keywords: ywfc, bacilysin synthesis, anticapsin synthesis, bi- cupin, double stranded beta helix, antibiotic biosynthesis, biosynthetic protein
  
• 3hav.pdb. transferase 02-may-09 3hav Mg
  Title: structure of the streptomycin-atp-aph(2")-iia ternary complex
  Author: p. g. young, e. n. baker, s. b. vakulenko, c. a. smith
  Keywords: streptomycin, atp, antibiotic resistance, transferase
  
• 3hd4.pdb. viral protein 06-may-09 3hd4
  Title: mhv nucleocapsid protein ntd
  Author: d. p. giedroc, s. c. keane, c. e. dann iii
  Keywords: cytoplasm, golgi apparatus, nucleus, phosphoprotein, ribonucleoprotein, rna-binding, transcription, transcription regulation, viral nucleoprotein, virion, viral protein
  
• 3hi1.pdb. structural protein/immune system 18-may-09 3hi1
  Title: structure of hiv-1 gp120 (core with v3) in complex with cd4- binding-site antibody f105
  Author: y. d. kwon, l. chen, t. zhou, x. wu, s. o'dell, l. cavacini, a. j. hessell, m. pancera, m. tang, l. xu, z. yang, m. -y. zhang, j. arthos, d. r. burton, d. dimitrov, g. j. nabel, m. posner, j. sodroski, r. wyatt, j. r. mascola, p. d. kwong
  Keywords: host-virus interaction, lipoprotein, membrane, palmitate, transmembrane, viral immunoevasion, virion, structural protein/immune system complex
  
• 3hl9.pdb. transferase 27-may-09 3hl9
  Title: simvastatin synthase (lovd) from aspergillus terreus, unliganded
  Author: m. r. sawaya, t. o. yeates, j. laidman, i. pashkov, x. gao, y. tang
  
  
• 3hlb.pdb. transferase 27-may-09 3hlb
  Title: simvastatin synthase (lovd) from aspergillus terreus, unliganded, selenomethionyl derivative
  Author: m. r. sawaya, t. o. yeates, j. laidman, i. pashkov, x. gao, y. tang
  
  
• 3hlc.pdb. transferase 27-may-09 3hlc
  Title: simvastatin synthase (lovd) from aspergillus terreus, s5 mutant, unliganded
  Author: m. r. sawaya, t. o. yeates, j. laidman, i. pashkov, x. gao, y. tang
  Keywords: transferase
  
• 3hld.pdb. transferase 27-may-09 3hld
  Title: simvastatin synthase (lovd), from aspergillus terreus, s5 mutant complex with monacolin j acid
  Author: m. r. sawaya, t. o. yeates, i. pashkov, x. gao, y. tang
  Keywords: transferase
  
• 3hle.pdb. transferase 27-may-09 3hle
  Title: simvastatin synthase (lovd), from aspergillus terreus, s5 mutant, s76a mutant, complex with monacolin j acid
  Author: m. r. sawaya, t. o. yeates, i. pashkov, x. gao, y. tang
  Keywords: transferase
  
• 3hlf.pdb. transferase 27-may-09 3hlf
  Title: simvastatin synthase (lovd), from aspergillus terreus, s5 mutant, s76a mutant, complex with simvastatin
  Author: m. r. sawaya, t. o. yeates, i. pashkov, x. gao, y. tang
  Keywords: transferase
  
• 3hlg.pdb. transferase 27-may-09 3hlg
  Title: simvastatin synthase (lovd), from aspergillus terreus, s5 mutant, s76a mutant, complex with lovastatin
  Author: m. r. sawaya, t. o. yeates, i. pashkov, x. gao, y. tang
  
  
• 3hpt.pdb. hydrolase, blood clotting 04-jun-09 3hpt Na Ca
  Title: crystal structure of human fxa in complex with (s)-2-cyano- 1-(2-methylbenzofuran-5-yl)-3-(2-oxo-1-(2-oxo-2- (pyrrolidin-1-yl)ethyl)azepan-3-yl)guanidine
  Author: h. e. klei, k. ghosh, a. rushith, k. kish
  Keywords: polymorphism, zymogen, blood clotting, blood coagulation, disulfide bond, protease, secreted
  
• 3hr6.pdb. structural protein, cell adhesion 08-jun-09 3hr6 I Ca
  Title: structure of the corynebacterium diphtheriae major pilin spaa points to a modular pilus assembly stabilizing isopeptide bonds
  Author: h. j. kang, n. g. paterson, a. h. gaspar, h. ton-that, e. n. baker
  Keywords: cell wall, peptidoglycan-anchor, structural protein, cell adhesion
  
• 3hsn.pdb. oxidoreductase 10-jun-09 3hsn Zn Fe
  Title: ternary structure of neuronal nitric oxide synthase with nha and co bound
  Author: t. doukov, h. li, m. soltis, t. l. poulos
  Keywords: heme enzyme, diatomic ligand, alternative splicing, calmodulin-binding, cell membrane, cell projection, fad, fmn, heme, iron, membrane, metal- binding, nadp, oxidoreductase
  
• 3hso.pdb. oxidoreductase 10-jun-09 3hso Zn Fe
  Title: ternary structure of neuronal nitric oxide synthase with nha and no bound(1)
  Author: t. doukov, h. li, m. soltis, t. l. poulos
  Keywords: alternative splicing, calmodulin-binding, cell membrane, cell projection, fad, fmn, heme, iron, membrane, metal- binding, nadp, oxidoreductase
  
• 3hsp.pdb. oxidoreductase 10-jun-09 3hsp Zn Fe
  Title: ternary structure of neuronal nitric oxide synthase with nha and no bound(2)
  Author: t. doukov, h. li, m. soltis, t. l. poulos
  Keywords: alternative splicing, calmodulin-binding, cell membrane, cell projection, fad, fmn, heme, iron, membrane, metal- binding, nadp, oxidoreductase
  
• 3htl.pdb. structural protein, cell adhesion 11-jun-09 3htl Na Ca Se
  Title: structure of the corynebacterium diphtheriae major pilin spaa points to a modular pilus assembly with stabilizing isopeptide bonds
  Author: h. j. kang, n. g. paterson, a. h. gaspar, h. ton-that, e. n. baker
  Keywords: ig-like fold, cell wall, peptidoglycan- anchor, structural protein, cell adhesion
  
• 3hv3.pdb. transferase 15-jun-09 3hv3
  Title: human p38 map kinase in complex with rl49
  Author: c. gruetter, j. r. simard, m. getlik, d. rauh
  Keywords: transferase
  
• 3hv4.pdb. transferase 15-jun-09 3hv4
  Title: human p38 map kinase in complex with rl51
  Author: c. gruetter, j. r. simard, m. getlik, d. rauh
  Keywords: transferase
  
• 3hv5.pdb. transferase 15-jun-09 3hv5
  Title: human p38 map kinase in complex with rl24
  Author: c. gruetter, j. r. simard, m. getlik, d. rauh
  Keywords: transferase
  
• 3hv6.pdb. transferase 15-jun-09 3hv6
  Title: human p38 map kinase in complex with rl39
  Author: c. gruetter, j. r. simard, m. getlik, d. rauh
  Keywords: type ii, rl39, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3hv7.pdb. transferase 15-jun-09 3hv7
  Title: human p38 map kinase in complex with rl38
  Author: c. gruetter, j. r. simard, m. getlik, d. rauh
  Keywords: type iii, rl38, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3hvg.pdb. hydrolase 16-jun-09 3hvg
  Title: structure of bace (beta secretase) in complex with ev0
  Author: r. godemann, j. madden, j. kramer, m. a. smith, j. barker, a. ebneth
  Keywords: fragment-based drug design, fluorescence polarisation, alternative splicing, disulfide bond, polymorphism, transmembrane, zymogen
  
• 3hw1.pdb. hydrolase 17-jun-09 3hw1
  Title: structure of bace (beta secretase) in complex with ligand ev2
  Author: r. godemann, j. madden, j. kramer, m. a. smith, j. barker, a. ebneth
  Keywords: fragment-based drug design, fluorescence polarisation, alternative splicing, disulfide bond, polymorphism, transmembrane, zymogen
  
• 3hxo.pdb. blood clotting/blood clotting regulator 21-jun-09 3hxo
  Title: crystal structure of von willebrand factor (vwf) a1 domain in complex with dna aptamer arc1172, an inhibitor of vwf- platelet binding
  Author: r. h. huang, j. e. sadler, d. h. fremont, j. l. diener, r. g. schaub
  Keywords: isopeptide bond, polymorphism, secreted, ubl conjugation, von willebrand disease, blood clotting/blood clotting regulator complex
  
• 3hxq.pdb. blood clotting/blood clotting regulator 21-jun-09 3hxq
  Title: crystal structure of von willebrand factor (vwf) a1 domain in complex with dna aptamer arc1172, an inhibitor of vwf- platelet binding
  Author: r. h. huang, j. e. sadler, d. h. fremont, j. l. diener, r. g. schaub
  Keywords: isopeptide bond, polymorphism, secreted, ubl conjugation, von willebrand disease, blood clotting/blood clotting regulator complex
  
• 3i1u.pdb. hydrolase 28-jun-09 3i1u Zn
  Title: carboxypeptidase a inhibited by a thiirane mechanism-based inactivator
  Author: d. fernandez
  Keywords: hydrolase, thiirane, covalently-modified protein, zinc-dependent protease
  
• 3i9z.pdb. chaperone 13-jul-09 3i9z Cu
  Title: crystal structure of a metallochaperone with a trinuclear cu(i) cluster
  Author: s. j. hearnshaw, l. zhou, n. e. le brun, a. m. hemmings
  Keywords: copper, cytoplasm, metal-binding
  
• 3ibx.pdb. hydrolase 17-jul-09 3ibx
  Title: crystal structure of f47y variant of tena (hp1287) from helicobacter pylori
  Author: n. barison, l. cendron, a. trento, a. angelini, g. zanotti
  Keywords: vitamin b1, helicobacter pylori, thiaminase, hydrolase
  
• 3icr.pdb. oxidoreductase 18-jul-09 3icr Se
  Title: crystal structure of oxidized bacillus anthracis coadr-rhd
  Author: j. r. wallen, a. claiborne
  Keywords: rhodanese, coenzyme a, flavin adenine dinucleotide
  
• 3ics.pdb. oxidoreductase 18-jul-09 3ics Se
  Title: crystal structure of partially reduced bacillus anthracis coadr-rhd
  Author: j. r. wallen, a. claiborne
  Keywords: rhodanese, coenzyme a, flavin adenine dinucleotide
  
• 3ict.pdb. oxidoreductase 18-jul-09 3ict Se
  Title: crystal structure of reduced bacillus anthracis coadr-rhd
  Author: j. r. wallen, a. claiborne
  Keywords: rhodanese, coenzyme a, flavin adenine dinucleotide
  
• 3idx.pdb. immune system 22-jul-09 3idx
  Title: crystal structure of hiv-gp120 core in complex with cd4- binding site antibody b13, space group c222
  Author: l. chen, y. d. kwon, t. zhou, x. wu, s. o'dell, l. cavacini, a. j. hessell, m. pancera, m. tang, l. xu, z. y. yang, m. y. zhang, j. arthos, d. r. burton, d. s. dimitrov, g. j. nabel, m. posner, j. sodroski, r. wyatt, j. r. mascola, p. d. kwong
  Keywords: host-virus interaction, membrane, transmembrane, viral immunoevasion, virion, immune system
  
• 3idy.pdb. immune system 22-jul-09 3idy
  Title: crystal structure of hiv-gp120 core in complex with cd4- binding site antibody b13, space group c2221
  Author: l. chen, y. d. kwon, t. zhou, x. wu, s. o'dell, l. cavacini, a. j. hessell, m. pancera, m. tang, l. xu, z. y. yang, m. y. zhang, j. arthos, d. r. burton, d. s. dimitrov, g. j. nabel, m. posner, j. sodroski, r. wyatt, j. r. mascola, p. d. kwong
  Keywords: host-virus interaction, membrane, transmembrane, viral immunoevasion, virion, immune system
  
• 3ifl.pdb. immune system 24-jul-09 3ifl
  Title: x-ray structure of amyloid beta peptide:antibody (abeta1- 7:12a11) complex
  Author: w. i. weis, h. feinberg, g. s. basi, d. schenk
  Keywords: amyloid beta peptide, immune system
  
• 3ifn.pdb. immune system 24-jul-09 3ifn
  Title: x-ray structure of amyloid beta peptide:antibody (abeta1- 40:12a11) complex
  Author: w. i. weis, h. feinberg, g. s. basi, d. schenk
  Keywords: amyloid beta peptide, immune system
  
• 3ifo.pdb. immune system 24-jul-09 3ifo
  Title: x-ray structure of amyloid beta peptide:antibody (abeta1- 7:10d5) complex
  Author: w. i. weis, h. feinberg, g. s. basi, d. schenk
  Keywords: amyloid beta peptide, immune system
  
• 3ifp.pdb. immune system 24-jul-09 3ifp
  Title: x-ray structure of amyloid beta peptide:antibody (abeta1- 7:12b4) complex
  Author: w. i. weis, h. feinberg, g. s. basi, d. schenk
  Keywords: amyloid beta peptide, immune system
  
• 3iga.pdb. transport protein 27-jul-09 3iga Ni
  Title: potassium channel kcsa-fab complex in li+ and k+
  Author: a. n thompson, k. ilsoo, t. d. panosian, t. m. iverson, t. w. allen, c. m. nimigean
  Keywords: lithium, lithium block, potassium channel, membrane protein, cell membrane, ion transport, ionic channel, membrane, transmembrane, transport, voltage-gated channel, transport protein
  
• 3ii5.pdb. transferase 31-jul-09 3ii5 F
  Title: the complex of wild-type b-raf with pyrazolo pyrimidine inhibitor
  Author: w. xu, d. breger, n. torres, m. dutia, d. powell, g. ciszewski
  Keywords: proto-oncogene, serine/threonine-protein kinase, transferase, zinc, zinc- finger
  
• 3ikn.pdb. sugar binding protein 06-aug-09 3ikn Ca
  Title: crystal structure of galactose bound trimeric human lung surfactant protein d
  Author: a. k. shrive, t. j. greenhough
  Keywords: neck+crd, calcium, coiled coil, collagen, disulfide bond, extracellular matrix, gaseous exchange, glycoprotein, hydroxylation, lectin, polymorphism, secreted, surface film, sugar binding protein
  
• 3ikp.pdb. sugar binding protein 06-aug-09 3ikp Ca
  Title: crystal structure of inositol phosphate bound trimeric human lung surfactant protein d
  Author: a. k. shrive, t. j. greenhough
  Keywords: neck+crd, calcium, coiled coil, collagen, disulfide bond, extracellular matrix, gaseous exchange, glycoprotein, hydroxylation, lectin, polymorphism, secreted, surface film, sugar binding protein
  
• 3ikq.pdb. sugar binding protein 06-aug-09 3ikq Ca
  Title: crystal structure of alpha 1-2 mannobiose bound trimeric human lung surfactant protein d
  Author: a. k. shrive, t. j. greenhough
  Keywords: neck+crd, calcium, coiled coil, collagen, disulfide bond, extracellular matrix, gaseous exchange, glycoprotein, hydroxylation, lectin, polymorphism, secreted, surface film, sugar binding protein
  
• 3ikr.pdb. sugar binding protein 06-aug-09 3ikr Ca
  Title: crystal structure of alpha 1-4 mannobiose bound trimeric human lung surfactant protein d
  Author: a. k. shrive, t. j. greenhough
  Keywords: neck+crd, calcium, coiled coil, collagen, disulfide bond, extracellular matrix, gaseous exchange, glycoprotein, hydroxylation, lectin, polymorphism, secreted, surface film, sugar binding protein
  
• 3ila.pdb. signaling protein 06-aug-09 3ila
  Title: crystal structure of rabbit ryanodine receptor 1 n-terminal domain (9-205)
  Author: p. a. lobo, f. van petegem
  Keywords: calcium, calcium channel, calcium transport, glycoprotein, ion transport, ionic channel, membrane, phosphoprotein, receptor, s-nitrosylation, transmembrane, transport
  
• 3im5.pdb. signaling protein 09-aug-09 3im5
  Title: crystal structure of mouse ryanodine receptor 2 (residues 1- 217)
  Author: f. van petegem, p. a. lobo
  Keywords: calcium release channel, cardiac channel, ion channel, arvc2, arvd2, cpvt, cardiac arrhythmia, ion transport, ionic channel, transmembrane, transport
  
• 3im6.pdb. signaling protein 09-aug-09 3im6
  Title: crystal structure of mouse ryanodine receptor 2 mutant v186m
  Author: f. van petegem, p. a. lobo
  Keywords: calcium release channel, ion channel, arrhythmia, cpvt, arvd2, arvc2, disease mutation, ion transport, ionic channel, transmembrane, transport
  
• 3im7.pdb. signaling protein 09-aug-09 3im7
  Title: crystal structure of mouse ryanodine receptor 2 n-terminal domain (1-217) disease mutant a77v
  Author: f. van petegem, p. a. lobo
  Keywords: calcium release channel, ion channel, arrhythmia, arvd2, arvc2, cpvt, tachycardia, disease mutation, ion transport, ionic channel, transmembrane, transport
  
• 3imd.pdb. signaling protein 10-aug-09 3imd Cl Mg
  Title: crystal structure of the grb2 sh2 domain in complex with a flexible ac-py-q-n-nh2 tripeptide mimic
  Author: j. h. clements
  Keywords: ligand preorganization, peptide mimics, alternative splicing, golgi apparatus, host-virus interaction, phosphoprotein, sh2 domain, sh3 domain, signaling protein
  
• 3imj.pdb. signaling protein 10-aug-09 3imj
  Title: crystal structure of the grb2 sh2 domain in complex with a cyclopropyl-constrained ac-ptyr-ile-asn-nh2 tripeptide mimic
  Author: j. h. clements
  Keywords: ligand preorganization, cyclopropyl constraint, peptide mimics, alternative splicing, golgi apparatus, host-virus interaction, phosphoprotein, sh2 domain, sh3 domain, signaling protein
  
• 3in0.pdb. electron transport 11-aug-09 3in0 Cu
  Title: crystal structure of the f114p/m121q variant of pseudomonas aeruginosa azurin in the cu(ii) state
  Author: y. g. gao, h. robinson
  Keywords: azurin, greek key, beta barrel, electron transfer, copper, disulfide bond, electron transport, metal-binding, periplasm, transport
  
• 3in2.pdb. electron transport 11-aug-09 3in2 Cu
  Title: crystal structure of the n47s/m121l variant of pseudomonas aeruginosa azurin in the cu(ii) state
  Author: y. g. gao, h. robinson
  Keywords: azurin, greek key, beta barrel, electron transfer, copper, disulfide bond, electron transport, metal-binding, periplasm, transport
  
• 3in7.pdb. structural protein 11-aug-09 3in7
  Title: crystal structure of the grb2 sh2 domain in complex with a cyclopropyl-constrained ac-py-q-n-nh2 tripeptide mimic
  Author: j. h. clements
  Keywords: ligand preorganization, cyclopropyl constraint, peptide mimics, alternative splicing, golgi apparatus, host-virus interaction, phosphoprotein, sh2 domain, sh3 domain, structural protein
  
• 3in8.pdb. signaling protein 11-aug-09 3in8
  Title: crystal structure of the grb2 sh2 domain in complex with a flexible ac-ptyr-ile-asn-nh2 tripeptide mimic
  Author: a. p. benfield, j. h. clements
  Keywords: ligand preorganization, peptide mimics, alternative splicing, golgi apparatus, host-virus interaction, phosphoprotein, sh2 domain, sh3 domain, signaling protein
  
• 3io7.pdb. transferase 13-aug-09 3io7
  Title: 2-aminopyrazolo[1,5-a]pyrimidines as potent and selective inhibitors of jak2
  Author: h. j. zuccola, m. w. ledeboer, a. c. pierce
  Keywords: tyrosine-protein kinase
  
• 3iok.pdb. transferase 14-aug-09 3iok F
  Title: 2-aminopyrazolo[1,5-a]pyrimidines as potent and selective inhibitors of jak2
  Author: h. j. zuccola, m. w. ledeboer, a. c. pierce
  Keywords: tyrosine-protein kinase
  
• 3iqg.pdb. transferase 20-aug-09 3iqg
  Title: structure of o-acetylserine sulfhydrylase in complex with peptide mnwni
  Author: s. l. roderick
  Keywords: allosteric enzyme, amino-acid biosynthesis, cysteine biosynthesis, pyridoxal phosphate, transferase
  
• 3iqh.pdb. transferase 20-aug-09 3iqh
  Title: structure of o-acetylserine sulfhydrylase in complex with peptide mnydi
  Author: s. l. roderick
  Keywords: allosteric enzyme, amino-acid biosynthesis, cysteine biosynthesis, pyridoxal phosphate, transferase
  
• 3iqi.pdb. transferase 20-aug-09 3iqi
  Title: structure of o-acetylserine sulfhydrylase in complex with peptide mneni
  Author: s. l. roderick
  Keywords: allosteric enzyme, amino-acid biosynthesis, cysteine biosynthesis, pyridoxal phosphate, transferase
  
• 3it5.pdb. hydrolase 27-aug-09 3it5 Zn
  Title: crystal structure of the lasa virulence factor from pseudomonas aeruginosa
  Author: j. spencer, l. m. murphy, r. conners, r. b. sessions, s. j. gamblin
  Keywords: m23, beta-protein, cell membrane, cell outer membrane, hydrolase, membrane, metal-binding, metalloprotease, protease, zinc, zymogen
  
• 3it7.pdb. hydrolase 27-aug-09 3it7 Zn
  Title: crystal structure of the lasa virulence factor from pseudomonas aeruginosa
  Author: j. spencer, l. m. murphy, r. conners, r. b. sessions, s. j. gamblin
  Keywords: m23, beta-protein, cell membrane, cell outer membrane, hydrolase, membrane, metal-binding, metalloprotease, protease, zinc, zymogen
  
• 3ite.pdb. ligase 28-aug-09 3ite Cl Se
  Title: the third adenylation domain of the fungal sidn non- ribosomal peptide synthetase
  Author: t. v. lee, j. s. lott, r. d. johnson, l. j. johnson, v. l. arcus
  Keywords: non-ribosomal peptide synthesis, nrps, siderophore synthetase, sidna3, fungal, endophyte
  
• 3iw5.pdb. transferase 02-sep-09 3iw5 F
  Title: human p38 map kinase in complex with an indole derivative
  Author: c. gruetter, j. r. simard, d. rauh
  Keywords: type-i, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3iw6.pdb. transferase 02-sep-09 3iw6
  Title: human p38 map kinase in complex with a benzylpiperazin- pyrrol
  Author: c. gruetter, j. r. simard, d. rauh
  Keywords: type-i, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3iw7.pdb. transferase 02-sep-09 3iw7
  Title: human p38 map kinase in complex with an imidazo-pyridine
  Author: c. gruetter, j. r. simard, d. rauh
  Keywords: type-i, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3iw8.pdb. transferase 02-sep-09 3iw8 Cl F
  Title: structure of inactive human p38 map kinase in complex with a thiazole-urea
  Author: c. gruetter, j. r. simard, d. rauh
  Keywords: type-iii, thiazole, alternative splicing, atp- binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3jrm.pdb. hydrolase/hydrolase activator 08-sep-09 3jrm
  Title: crystal structure of archaeal 20s proteasome in complex with mutated p26 activator
  Author: b. m. stadtmueller, f. g. whitby, c. p. hill
  Keywords: pa26, cytoplasm, hydrolase, protease, proteasome, threonine protease, hydrolase/hydrolase activator complex
  
• 3jro.pdb. transport protein, structural protein 08-sep-09 3jro Se
  Title: nup84-nup145c-sec13 edge element of the npc lattice
  Author: s. g. brohawn, t. u. schwartz
  Keywords: hydrolase, phosphoprotein, transport protein, structural protein
  
• 3jrp.pdb. transport protein, structural protein 08-sep-09 3jrp
  Title: sec13 with nup145c (aa109-179) insertion blade
  Author: s. g. brohawn, m. gogola, t. u. schwartz
  Keywords: hydrolase, phosphoprotein, rna-binding, transport protein, structural protein
  
• 3jse.pdb. hydrolase/hydrolase activator 10-sep-09 3jse
  Title: crystal structure of archaeal 20s proteasome in complex with mutated p26 activator
  Author: b. m. stadtmueller, f. g. whitby, c. p. hill
  Keywords: pa26, proteasome activation, cytoplasm, hydrolase, protease, proteasome, threonine protease, hydrolase/hydrolase activator complex
  
• 3jt2.pdb. transport protein 11-sep-09 3jt2 Cu
  Title: cu(ii) n47s/m121l variant of pseudomonas aeruginosa azurin
  Author: y. g. gao, h. robinson
  Keywords: azurin, greek key, beta barrel, electron transfer, copper, disulfide bond, electron transport, metal-binding, periplasm, transport, transport protein
  
• 3jtb.pdb. transport protein 11-sep-09 3jtb Cu
  Title: cu(ii) n47s/f114n variant of pseudomonas aeruginosa azurin
  Author: y. g. gao, h. robinson
  Keywords: azurin, greek key, beta barrel, electron transfer, copper, disulfide bond, electron transport, metal-binding, periplasm, transport, transport protein
  
• 3jtl.pdb. hydrolase/hydrolase activator 12-sep-09 3jtl
  Title: crystal structure of archaeal 20s proteasome in complex with mutated p26 activator
  Author: b. m. stadtmueller, f. g. whitby, c. p. hill
  Keywords: pa26, cytoplasm, hydrolase, protease, proteasome, threonine protease
  
• 3jum.pdb. biosynthetic protein 15-sep-09 3jum Br
  Title: crystal structure of phza/b from burkholderia cepacia r18194 in complex with 5-bromo-2-((1s,3r)-3- carboxycyclohexylamino)benzoic acid
  Author: m. mentel, r. breinbauer, w. blankenfeldt
  Keywords: drug design, phenazine biosynthesis, medicinal chemistry, inhibitor, biosynthetic protein
  
• 3jun.pdb. biosynthetic protein 15-sep-09 3jun Br
  Title: crystal structure of phza/b from burkholderia cepacia r18194 in simultaneous complex with racemic 5-bromo-2-(piperidin- 3-ylamino)benzoic acid
  Author: m. mentel, r. breinbauer, w. blankenfeldt
  Keywords: drug design, phenazine biosynthesis, racemate, racemic mixture, biosynthetic protein
  
• 3juo.pdb. biosynthetic protein 15-sep-09 3juo Br
  Title: crystal structure of phza/b from burkholderia cepacia r18194 in complex with (r)-5-bromo-2-(piperidin-3-ylamino)benzoic acid
  Author: m. mentel, i. h. jain, r. breinbauer, w. blankenfeldt
  Keywords: drug design, phenazine biosynthesis, medicinal chemistry, inhibitor, biosynthetic protein
  
• 3jup.pdb. biosynthetic protein 15-sep-09 3jup Br
  Title: crystal structure of phza/b from burkholderia cepacia r18194 in complex with (s)-5-bromo-2-(piperidin-3-ylamino)benzoic acid
  Author: m. mentel, i. h. jain, r. breinbauer, w. blankenfeldt
  Keywords: drug design, phenazine biosynthesis, medicinal chemistry, inhibitor, biosynthetic protein
  
• 3juq.pdb. biosynthetic protein 15-sep-09 3juq Br
  Title: crystal structure of phza/b from burkholderia cepacia r18194 cocrystallized with 2 mm racemic 5-bromo-2-(piperidin-3- ylamino)benzoic acid
  Author: m. mentel, r. breinbauer, w. blankenfeldt
  Keywords: drug design, phenazine biosynthesis, racemate, racemic mixture, biosynthetic protein
  
• 3jur.pdb. hydrolase 15-sep-09 3jur
  Title: the crystal structure of a hyperthermoactive exopolygalacturonase from thermotoga maritima
  Author: t. pijning, g. van pouderoyen, l. d. kluskens, j. van der oost, b. w. dijkstra
  Keywords: cell wall biogenesis/degradation, glycosidase, hydrolase
  
• 3jyu.pdb. hydrolase 22-sep-09 3jyu Se
  Title: crystal structure of the n-terminal domains of the ubiquitin specific peptidase 4 (usp4)
  Author: j. p. bacik, g. avvakumov, j. r. walker, s. xue, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
  Keywords: proto- oncogene, ubiquitin-fold, ubl, protease, thioesterase, hydrolase, thiol protease, ubl conjugation pathway, structural genomics, structural genomics consortium, sgc
  
• 3jzk.pdb. ligase 23-sep-09 3jzk Br
  Title: crystal structure of mdm2 with chromenotriazolopyrimidine 1
  Author: x. huang
  Keywords: p53, inhibitor, alternative splicing, cytoplasm, host- virus interaction, ligase, metal-binding, nucleus, phosphoprotein, proto-oncogene, ubl conjugation, ubl conjugation pathway, zinc, zinc-finger
  
• 3k2f.pdb. lyase 30-sep-09 3k2f Hg Zn
  Title: nitric oxide-donating carbonic anhydrase inhibitors for the treatment of open-angle glaucoma
  Author: c. temperini, a. cecchi
  Keywords: no-donating agent, antiglaucoma drug, sulfonamide, xray crystallography, lyase, acetylation, cytoplasm, disease mutation, metal-binding, polymorphism, zinc
  
• 3k2q.pdb. transferase 30-sep-09 3k2q Na
  Title: crystal structure of pyrophosphate-dependent phosphofructokinase from marinobacter aquaeolei, northeast structural genomics consortium target mqr88
  Author: j. seetharaman, s. lew, d. wang, h. neely, k. janjua, k. cunningham, l. owens, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: kinase transferase, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, kinase, transferase
  
• 3k2y.pdb. nucleotide binding protein 30-sep-09 3k2y
  Title: crystal structure of protein lp_0118 from lactobacillus plantarum,northeast structural genomics consortium target lpr91b
  Author: j. seetharaman, s. lew, s. m. vorobiev, d. wang, h. janjua, k. cunningham, l. owens, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: zinc ion binding, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 3k3f.pdb. transport protein 02-oct-09 3k3f Au
  Title: crystal structure of the urea transporter from desulfovibrio vulgaris
  Author: e. j. levin, m. zhou, new york consortium on membrane protein structure (nycomps)
  Keywords: channel, urea transport, transporter, transport protein, structural genomics, psi-2, protein structure initiative, new york consortium on membrane protein structure, nycomps
  
• 3k3g.pdb. transport protein 02-oct-09 3k3g Au
  Title: crystal structure of the urea transporter from desulfovibrio vulgaris bound to 1,3-dimethylurea
  Author: e. j. levin, m. zhou, new york consortium on membrane protein structure (nycomps)
  Keywords: channel, urea transport, transporter, transport protein, structural genomics, psi-2, protein structure initiative, new york consortium on membrane protein structure, nycomps
  
• 3k3i.pdb. transferase 02-oct-09 3k3i F Br
  Title: p38alpha bound to novel dgf-out compound pf-00215955
  Author: s. l. kazmirski, j. p. dinitto
  Keywords: alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3k3k.pdb. hormone receptor, signaling protein 02-oct-09 3k3k
  Title: crystal structure of dimeric abscisic acid (aba) receptor pyrabactin resistance 1 (pyr1) with aba-bound closed-lid and aba-free open-lid subunits
  Author: a. s. arvai, k. hitomi, e. d. getzoff
  Keywords: cluster a type 2c protein phosphatase (pp2c) inhibitor, pyrabactin resistance 1, pyrabactin, pyl, phytohormone
  
• 3k44.pdb. nucleic acid binding protein 05-oct-09 3k44 Cl
  Title: crystal structure of drosophila melanogaster pur-alpha
  Author: a. graebsch, s. roche, d. niessing
  Keywords: pur repeat, pur domain, whirly fold, dna binding protein, rna binding protein, nucleic acid binding protein
  
• 3k49.pdb. rna binding protein / rna 05-oct-09 3k49
  Title: puf3 rna binding domain bound to cox17 rna 3' utr recognition sequence site b
  Author: d. zhu, c. r. stumpf, j. m. krahn, m. wickens, t. m. t. hall
  Keywords: pumilio, rna binding, mitochondrial mrna,, cytoplasm, membrane, mitochondrion, mitochondrion outer membrane, phosphoprotein, rna-binding, rna binding protein / rna complex
  
• 3k4u.pdb. transport protein 06-oct-09 3k4u Se
  Title: crystal structure of putative binding component of abc transporter from wolinella succinogenes dsm 1740 complexed with lysine
  Author: v. n. malashkevich, r. toro, c. morano, m. j. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: new york sgx research center for structural genomics, transport protein
  
• 3k6n.pdb. metal transport 09-oct-09 3k6n Na
  Title: crystal structure of the s225e mutant kir3.1 cytoplasmic pore domain
  Author: y. xu, h. g. shin, s. szep, z. lu
  Keywords: cytoplasmic domain, g protein, inward rectifier, potassium channel, metal transport, ion transport, ionic channel, transmembrane
  
• 3k9u.pdb. transferase 16-oct-09 3k9u Cl Br Ni
  Title: crystal structure of paia acetyltransferase (ta0374) from thermoplasma acidophilum
  Author: e. v. filippova, g. minasov, l. shuvalova, o. kiryukhina, a. joachimiak, w. f. anderson, midwest center for structural genomics (mcsg)
  Keywords: acetyltransferase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 3ka7.pdb. oxidoreductase 18-oct-09 3ka7 Se
  Title: crystal structure of an oxidoreductase from methanosarcina mazei. northeast structural genomics consortium target id mar208
  Author: j. seetharaman, m. su, d. wang, h. janjua, k. cunningham, l. owens, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 3kb4.pdb. structural genomics, unknown function 20-oct-09 3kb4 Mg Se
  Title: crystal structure of the alr8543 protein in complex with geranylgeranyl monophosphate and magnesium ion from nostoc sp. pcc 7120, northeast structural genomics consortium target nsr141
  Author: f. forouhar, h. neely, j. seetharaman, x. xiao, c. ciccosanti, d. patel, r. l. belote, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, plasmid
  
• 3kbb.pdb. hydrolase 20-oct-09 3kbb Se
  Title: crystal structure of putative beta-phosphoglucomutase from thermotoga maritima
  Author: r. w. strange, s. v. antonyuk, m. j. ellis, y. bessho, s. kuramitsu, s. yokoyama, s. s. hasnain, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi
  
• 3kcc.pdb. transcription 21-oct-09 3kcc
  Title: crystal structure of d138l mutant of catabolite gene activator protein
  Author: w. b. tao, z. q. gao, j. h. zhou, y. h. dong, s. n. yu
  Keywords: activator, camp, camp-binding, dna- binding, nucleotide-binding, transcription, transcription regulation
  
• 3kcn.pdb. lyase 21-oct-09 3kcn Se
  Title: the crystal structure of adenylate cyclase from rhodopirellula baltica
  Author: z. zhang, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: adenylate cyclase, psi 2, structural genomics, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
  
• 3kcs.pdb. fluorescent protein 21-oct-09 3kcs
  Title: crystal structure of pamcherry1 in the dark state
  Author: v. n. malashkevich, f. v. subach, w. d. zencheck, h. xiao, g. s. filonov, s. c. almo, v. v verkhusha
  Keywords: photoconversion, chromophore structure, palm
  
• 3kct.pdb. fluorescent protein 21-oct-09 3kct
  Title: crystal structure of pamcherry1 in the photoactivated state
  Author: v. n. malashkevich, f. v. subach, w. d. zencheck, h. xiao, g. s. filonov, s. c. almo, v. v verkhusha
  Keywords: photoconversion, chromophore structure, palm
  
• 3kh0.pdb. signaling protein 29-oct-09 3kh0
  Title: crystal structure of the ras-association (ra) domain of ralgds
  Author: y. shen, w. tempel, h. wang, y. tong, x. guan, l. crombet, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: sgc, ras-association domain, alternative splicing, guanine-nucleotide releasing factor
  
• 3khu.pdb. oxidoreductase 30-oct-09 3khu
  Title: crystal structure of human udp-glucose dehydrogenase glu161gln, in complex with thiohemiacetal intermediate
  Author: a. chaikuad, s. egger, w. w. yue, k. guo, r. sethi, p. filippakopoulos, j. r. c. muniz, f. von delft, c. bountra, c. h. arrowsmith, j. weigelt, a. m. edwards, k. l. kavanagh, b. nidetzky, u. oppermann, structural genomics consortium (sgc)
  Keywords: thiohemiacetal intermediate, structural genomics, structural genomics consortium, sgc
  
• 3kio.pdb. hydrolase 02-nov-09 3kio Se
  Title: mouse rnase h2 complex
  Author: n. shaban, s. harvey, f. w. perrino, t. hollis
  Keywords: aicardi-goutieres syndrome, rnase h2, protein complex, autoimmune disease, endonuclease, hydrolase, metal-binding, nuclease, nucleus, phosphoprotein, acetylation
  
• 3kiz.pdb. ligase 02-nov-09 3kiz Se
  Title: crystal structure of putative phosphoribosylformylglycinamidine cyclo-ligase (yp_676759.1) from cytophaga hutchinsonii atcc 33406 at 1.50 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, ligase
  
• 3kjd.pdb. transferase 03-nov-09 3kjd
  Title: human poly(adp-ribose) polymerase 2, catalytic fragment in complex with an inhibitor abt-888
  Author: t. karlberg, p. schutz, c. h. arrowsmith, h. berglund, c. bountra, r. collins, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, a. kallas, t. kotenyova, a. kotzsch, p. kraulis, t. k. nielsen, m. moche, p. nordlund, t. nyman, c. persson, a. k. roos, m. i. siponen, a. g. thorsell, l. tresaugues, s. van den berg, j. weigelt, m. welin, m. wisniewska, h. schuler, structural genomics consortium (sgc)
  Keywords: enzyme-inhibitor complex, catalytic fragment, structural genomics, structural genomics consortium, sgc, alternative splicing, glycosyltransferase, nad, nucleus, dna-binding, polymorphism
  
• 3kjr.pdb. transferase 03-nov-09 3kjr
  Title: crystal structure of dihydrofolate reductase/thymidylate synthase from babesia bovis determined using slipchip based microfluidics
  Author: l. li, w. du, t. e. edwards, b. l. staker, i. phan, r. stacy, r. f. ismagilov, accelerated technologies center for gene to 3d structure (atcg3d), seattle structural genomics center for infectious disease (ssgcid)
  Keywords: methyltransferase, transferase, ssgcid
  
• 3kjx.pdb. transcription regulator 03-nov-09 3kjx Se
  Title: crystal structure of a transcriptional regulator, lacl family protein from silicibacter pomeroyi
  Author: k. palani, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: lacl family, protein structure initiative ii(psi ii), nysgxrc, 11232m, structural genomics, new york sgx research center for structural genomics, dna-binding, transcription, transcription regulation
  
• 3kjy.pdb. transport protein 04-nov-09 3kjy
  Title: crystal structure of reduced homo sapiens clic3
  Author: d. r. littler, p. m. g. curmi, s. n. breit, a. perrakis
  Keywords: glutathione, clic, chloride channel, chloride intracel, chloride, cytoplasm, ion transport, ionic channel, nucleus, polymorphism, transport, voltage-gated channel
  
• 3kk4.pdb. structural genomics, unknown function 04-nov-09 3kk4 Se
  Title: uncharacterized protein bp1543 from bordetella pertussis tohama i
  Author: c. chang, g. chhor, g. cobb, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 3kk5.pdb. virus 04-nov-09 3kk5 (electron microscopy)
  Title: crystal structure of pbcv-1 vp54 fitted into a cryo-em reconstruction of the virophage sputnik
  Author: s sun, m. g. rossmann
  Keywords: capsid protein, late protein, virion, icosahedral virus
  
• 3kkb.pdb. transferase 05-nov-09 3kkb Se
  Title: the crystal structure of a two-component sensor domain from pseudomonas aeruginosa pa01
  Author: k. tan, g. chhor, k. buck, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: nucleotide-binding, phosphoprotein, transferase, transmembrane
  
• 3kkc.pdb. transcription regulator 05-nov-09 3kkc Ni Se
  Title: the crystal structure of tetr transcriptional regulator from streptococcus agalactiae 2603v
  Author: k. tan, c. hatzos, t. morgan, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: tetr, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, dna-binding, transcription, transcription regulation
  
• 3kkk.pdb. isomerase 05-nov-09 3kkk
  Title: y92c catalytic residue mutant of phosphoglycerate mutase from plasmodium falciparum
  Author: e. t. larson, e. a. merritt, medical structural genomics of pathogenic protozoa
  Keywords: glycolysis, malaria, structural genomics, medical structural genomics of pathogenic protozoa, msgpp
  
• 3kmi.pdb. membrane protein 10-nov-09 3kmi Se
  Title: crystal structure of putative membrane protein from clostridium difficile 630
  Author: c. chang, e. rakowski, j. bearden, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: psi-2, protein structure initiative, midwest center for structural genomics, mcsg