Recent PDB releases or updates: week of 25 September 2009
- 1asv.pdb.
dna integration 25-aug-95 1asv
Title: avian sarcoma virus integrase catalytic core domain
Author: g. bujacz, m. jaskolski, j. alexandratos, a. wlodawer
- 1b6l.pdb.
hydrolase/hydrolase inhibitor 17-jan-99 1b6l
Title: hiv-1 protease complexed with macrocyclic peptidomimetic inhibitor 4
Author: j. l. martin, j. begun, a. schindeler, w. a. wickramasinghe, d. alewood, p. f. alewood, d. a. bergman, r. i. brinkworth, g. abbenante, d. r. march, r. c. reid, d. p. fairlie
Keywords: hydrolase/hydrolase inhibitor complex
- 1b86.pdb.
haemoglobin 08-feb-99 1b86
Fe
Title: human deoxyhaemoglobin-2,3-diphosphoglycerate complex
Author: v. richard, g. g. dodson, y. mauguen
Keywords: allosteric effector, 2, 3-diphosphoglycerate
- 1bid.pdb.
methyltransferase 27-jun-97 1bid
Title: e. coli thymidylate synthase complexed with dump
Author: t. j. stout, c. r. sage, r. m. stroud
Keywords: substrate modules
- 1blc.pdb.
hydrolase(acting in cyclic amides) 27-sep-93 1blc
Title: inhibition of beta-lactamase by clavulanate: trapped intermediates in cryocrystallographic studies
Author: c. c. h. chen, o. herzberg
- 1fy1.pdb.
antimicrobial protein 28-sep-00 1fy1
Title: [r23s,f25e]hbp, a mutant of human heparin binding protein (cap37)
Author: j. s. kastrup, v. linde, a. k. pedersen, b. stoffer, l. f. iversen, i. k. larsen, p. b. rasmussen, h. j. flodgaard, s. e. bjorn
Keywords: endotoxin (lipid a) binding site, antimicrobial protein
- 1gag.pdb.
transferase, signaling protein 29-nov-00 1gag
Mg
Title: crystal structure of the insulin receptor kinase in complex with a bisubstrate inhibitor
Author: k. parang, j. h. till, a. j. ablooglu, r. a. kohanski, s. r. hubbard, p. a. cole
Keywords: tyrosine kinase, transferase, signaling protein
- 1i89.pdb.
transferase 12-mar-01 1i89
Title: chalcone synthase (g256l)
Author: j. m. jez, m. e. bowman, j. p. noel
Keywords: polyketide synthase, transferase
- 1i8b.pdb.
transferase 12-mar-01 1i8b
Title: chalcone synthase (g256f)
Author: j. m. jez, m. e. bowman, j. p. noel
Keywords: polyketide synthase, transferase
- 1lw4.pdb.
lyase 30-may-02 1lw4
Cl Ca Se
Title: x-ray structure of l-threonine aldolase (low-specificity) in complex with l-allo-threonine
Author: c. l. kielkopf, s. k. burley, new york sgx research center for structural genomics (nysgxrc)
Keywords: plp, enzyme, product complex, threonine, structural genomics, psi, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, lyase
- 1s1h.pdb.
ribosome 06-jan-04 1s1h
(electron microscopy)
Title: structure of the ribosomal 80s-eef2-sordarin complex from yeast obtained by docking atomic models for rna and protein components into a 11.7 a cryo-em map. this file, 1s1h, contains 40s subunit. the 60s ribosomal subunit is in file 1s1i.
Author: c. m. spahn, m. g. gomez-lorenzo, r. a. grassucci, r. jorgensen, g. r. andersen, r. beckmann, p. a. penczek, j. p. g. ballesta, j. frank
Keywords: 40s ribosomal subunit, eef2, trna translocation, sordarin, cryo-em
- 1s1i.pdb.
ribosome 06-jan-04 1s1i
(electron microscopy)
Title: structure of the ribosomal 80s-eef2-sordarin complex from yeast obtained by docking atomic models for rna and protein components into a 11.7 a cryo-em map. this file, 1s1i, contains 60s subunit. the 40s ribosomal subunit is in file 1s1h.
Author: c. m. spahn, m. g. gomez-lorenzo, r. a. grassucci, r. jorgensen, g. r. andersen, r. beckmann, p. a. penczek, j. p. g. ballesta, j. frank
Keywords: 60s ribosomal subunit, eef2, trna translocation, sordarin, cryo-em
- 1saz.pdb.
transferase 09-feb-04 1saz
Na Se
Title: membership in the askha superfamily: enzymological properties and crystal structure of butyrate kinase 2 from thermotoga maritima
Author: j. diao, d. r. cooper, d. a. sanders, m. s. hasson
Keywords: hsc70, actin) superfamily, butyrate kinase, acetate kinase, isobutyrate kinase, two similar domains, amppcp, butyrate, isobutyrate, disulfide bond, enzyme mechanism, transferase
- 1sf7.pdb.
hydrolase 19-feb-04 1sf7
(powder diffraction)
Title: binding of tetra-n-acetylchitotetraose to hew lysozyme: a powder diffraction study
Author: r. b. von dreele
Keywords: hydrolase
- 1wtc.pdb.
isomerase 22-nov-04 1wtc
Mg
Title: crystal structure of s.ponbe serine racemase complex with amppcp
Author: m. goto, i. miyahara, k. hirotsu
Keywords: isomerase
- 1wvh.pdb.
cell adhesion 15-dec-04 1wvh
Title: crystal structure of tensin1 ptb domain
Author: c. j. mccleverty, r. c. liddington
Keywords: cell adhesion
- 1wvq.pdb.
structural genomics, unknown function 24-dec-04 1wvq
Title: structure of conserved hypothetical protein pae2307 from pyrobaculum aerophilum
Author: j. s. lott, l. t. j. delbaere, m. j. banfield, j. sigrell, e. n. baker
Keywords: structural genomics, unknown function
- 1x1i.pdb.
lyase 04-apr-05 1x1i
Title: crystal structure of xanthan lyase (n194a) complexed with a product
Author: y. maruyama, w. hashimoto, b. mikami, k. murata
Keywords: beta sandwich, lyase
- 1xau.pdb.
immune system 26-aug-04 1xau
Cd
Title: structure of the btla ectodomain
Author: c. a. nelson, d. h. fremont, midwest center for structural genomics (mcsg)
Keywords: beta sandwich, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg, immune system
- 1xn0.pdb.
hydrolase 04-oct-04 1xn0
Mg Zn
Title: catalytic domain of human phosphodiesterase 4b in complex with (r,s)-rolipram
Author: g. l. card, b. p. england, y. suzuki, d. fong, b. powell, b. lee, c. luu, m. tabrizizad, s. gillette, p. n. ibrahim, d. r. artis, g. bollag, m. v. milburn, s. -h. kim, j. schlessinger, k. y. j. zhang
Keywords: pde, pde4b, rolipram, (r,s)-rolipram, hydrolase
- 1xxn.pdb.
hydrolase 07-nov-04 1xxn
Title: crystal structure of a mesophilic xylanase a from bacillus subtilis 1a1
Author: m. t. murakami, r. ruller, r. j. ward, r. k. arni
Keywords: thermostability, hydrolase
- 1zos.pdb.
hydrolase 13-may-05 1zos
Title: structure of 5'-methylthionadenosine/s-adenosylhomocysteine nucleosidase from s. pneumoniae with a transition-state inhibitor mt-imma
Author: w. shi, v. singh, r zhen, p. c. tyler, r. h. furneaux, s. c. almo, v. l. schramm
Keywords: pneumoniae, transition state, inhibitor, hydrolase
- 2aba.pdb.
oxidoreductase 15-jul-05 2aba
Title: structure of reduced petn reductase in complex with progesterone
Author: h. khan, t. barna, n. c. bruce, a. w. munro, d. leys, n. s. scrutton
Keywords: atomic resolution, progesterone, petn, oxidoreductase
- 2avp.pdb.
de novo protein 30-aug-05 2avp
Cd
Title: crystal structure of an 8 repeat consensus tpr superhelix
Author: t. kajander, a. l. cortajarena, e. r. main, s. mochrie, l. regan
Keywords: tpr, consensus protein, superhelix, de novo protein
- 2aw1.pdb.
lyase 31-aug-05 2aw1
Hg Zn
Title: carbonic anhydrase inhibitors: valdecoxib binds to a different active site region of the human isoform ii as compared to the structurally related cyclooxygenase ii "selective" inhibitor celecoxib
Author: a. di fiore, c. pedone, k. d'ambrosio, a. scozzafava, g. de simone, c. t. supuran
Keywords: protein-inhibitor complex, lyase
- 2dcn.pdb.
transferase 10-jan-06 2dcn
Mg K
Title: crystal structure of 2-keto-3-deoxygluconate kinase from sulfolobus tokodaii complexed with 2-keto-6- phosphogluconate (alpha-furanose form)
Author: s. okazaki, h. onda, a. suzuki, s. kuramitsu, r. masui, t. yamane
Keywords: sulfolobus tokodaii, 2-keto- d-gluconate, transferase
- 2dgn.pdb.
ligase 15-mar-06 2dgn
Mg
Title: mouse muscle adenylosuccinate synthetase partially ligated complex with gtp, 2'-deoxy-imp
Author: c. v. iancu, y. zhou, t. borza, h. j. fromm, r. b. honzatko
Keywords: gtp, adss1, 2'-deoxy-imp, ligase
- 2e3j.pdb.
hydrolase 27-nov-06 2e3j
Title: the crystal structure of epoxide hydrolase b (rv1938) from mycobacterium tuberculosis at 2.1 angstrom
Author: b. k. biswal, mycobacterium tuberculosis structural proteomics project (xmtb)
Keywords: mycobacterium tuberculosis, x-ray crystallography, structural genomics, mycobacterium tuberculosis structural proteomics project, xmtb
- 2fo7.pdb.
de novo protein 12-jan-06 2fo7
Cd
Title: crystal structure of an 8 repeat consensus tpr superhelix (trigonal crystal form)
Author: t. kajander, a. l. cortajarena, l. regan
Keywords: tpr, consensus protein, superhelix, de novo protein
- 2gaa.pdb.
unknown function 08-mar-06 2gaa
Title: crystal structure of yfh7 from saccharomyces cerevisiae: a putative p-loop containing kinase with a circular permutation.
Author: v. chaptal, s. morera
Keywords: yfh7, unknown function
- 2gy9.pdb.
ribosome 09-may-06 2gy9
(electron microscopy)
Title: structure of the 30s subunit of a pre-translocational e. coli ribosome obtained by fitting atomic models for rna and protein components into cryo-em map emd-1056
Author: k. mitra, j. frank
- 2gya.pdb.
ribosome 09-may-06 2gya
(electron microscopy)
Title: structure of the 50s subunit of a pre-translocational e. coli ribosome obtained by fitting atomic models for rna and protein components into cryo-em map emd-1056
Author: k. mitra, j. frank
- 2gyb.pdb.
ribosome 09-may-06 2gyb
(electron microscopy)
Title: structure of the 30s subunit of a secm-stalled e. coli ribosome complex obtained by fitting atomic models for rna and protein components into cryo-em map emd-1143
Author: k. mitra, j. frank
- 2gyc.pdb.
ribosome 09-may-06 2gyc
(electron microscopy)
Title: structure of the 50s subunit of a secm-stalled e. coli ribosome complex obtained by fitting atomic models for rna and protein components into cryo-em map emd-1143
Author: k. mitra, j. frank
Keywords: signal transduction, rna world, polypeptide exit tunnel, translocation, ribosome, elongation arrest, protein-conducting channel
- 2hyz.pdb.
de novo protein 08-aug-06 2hyz
Sm
Title: crystal structure of an 8 repeat consensus tpr superhelix (orthorombic crystal form)
Author: t. kajander, a. l. cortajarena, l. regan
Keywords: tetratricopeptide, protein design, protein stability, superhelix, de novo protein
- 2ig7.pdb.
transferase 22-sep-06 2ig7
Se
Title: crystal structure of human choline kinase b
Author: w. m. rabeh, w. tempel, l. nedyalkova, g. wasney, r. landry, m. vedadi, c. h. arrowsmith, a. m. edwards, m. sundstrom, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: choline kinase, structural genomics, structural genomics consortium, sgc, transferase
- 2k6g.pdb.
dna binding protein 09-jul-08 2k6g
(solution NMR)
Title: solution structure of the dna binding brct domain from the large subunit of human replication factor c
Author: m. kobayashi, g. siegal, e. ab, a. m. j. j. bonvin
Keywords: transcription, transcription regulation, zinc, zinc-finger, dna binding protein
- 2k7v.pdb.
transferase 27-aug-08 2k7v
(solution NMR)
Title: deletions in a surface loop divert the folding of a protein domain into a metastable dimeric form
Author: k. m. stott, a. m. yusof, r. n. perham, d. d. jones
Keywords: acyltransferase, glycolysis, lipoyl, transferase
- 2k7w.pdb.
apoptosis 27-aug-08 2k7w
(solution NMR)
Title: bax activation is initiated at a novel interaction site
Author: e. gavathiotis, m. suzuki, m. l. davis, k. pitter, g. h. bird, s. g. katz, h. c. tu, h. kim, e. h. cheng, n. tjandra, l. d. walensky
Keywords: bim, bh3, bcl-2, apoptosis
- 2k84.pdb.
viral protein 02-sep-08 2k84
(solution NMR)
Title: solution structure of the equine infectious anemia virus p9 gag protein
Author: a. sharma, k. bruns, r. roeder, p. henklein, j. votteler, v. wray, u. sharma
Keywords: capsid protein, core protein, host-virus interaction, metal-binding, viral matrix protein, viral nucleoprotein, virion, zinc, zinc-finger, viral protein
- 2kl0.pdb.
structural genomics, unknown function 29-jun-09 2kl0
(solution NMR)
Title: rpr325/rpa3574 from rhodopseudomonas palustris
Author: t. a. ramelot, h. wang, c. ciccosanti, m. jang, r. nair, b. rost, g. swapna, t. b. acton, r. xiao, j. k. everett, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 2knd.pdb.
photosynthesis 21-aug-09 2knd
(solution NMR)
Title: psb27 structure from synechocystis
Author: k. u. cormann, m. m. nowaczyk, j. -a. bangert, m. ikeuchi, m. roegner, r. stoll
Keywords: four-helix bundle, right-handed, photosynthesis, photosystem ii
- 2ko6.pdb.
structural genomics, unknown function 10-sep-09 2ko6
(solution NMR)
Title: solution structure of protein sf3929 from shigella flexneri 2a. northeast structural genomics consortium target sfr81/ontario center for structural proteomics target sf3929
Author: b. wu, a. yee, c. fares, a. lemak, a. semest, c. h. arrowsmith, northeast structural genomics consortium (nesg), ontario centre for structural proteomics (ocsp)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, ontario centre for structural proteomics, ocsp, unknown function
- 2ofw.pdb.
transferase 04-jan-07 2ofw
Mg
Title: crystal structure of the apsk domain of human papss1 complexed with 2 aps molecules
Author: n sekulic, a lavie
Keywords: transferase
- 2okk.pdb.
lyase 17-jan-07 2okk
Title: the x-ray crystal structure of the 65kda isoform of glutamic acid decarboxylase (gad65)
Author: a. m. buckle, g. fenalti, r. h. p. law, j. c. whisstock
Keywords: lyase
- 2onc.pdb.
hydrolase 23-jan-07 2onc
Title: crystal structure of human dpp-4
Author: j. feng, z. zhang, m. b. wallace, j. a. stafford, s. w. kaldor, d. b. kassel, m. navre, l. shi, r. j. skene, t. asakawa, k. takeuchi, r. xu, d. r. webb, s. l. gwaltney
Keywords: hydrolase
- 2pnx.pdb.
gene regulation 25-apr-07 2pnx
Zn
Title: the phd finger of ing4 in complex with an h3k4me3 histone peptide
Author: k. s. champagne, k. johnson, t. g. kutateladze
Keywords: chromatin, zinc finger, histone, gene regulation
- 2q2j.pdb.
toxin 28-may-07 2q2j
Title: crystal structure of prtx-i, a pla2 homolog from bothrops pirajai
Author: j. i. dos santos, m. r. fontes
Keywords: pla2 like, lys49-pla2, phospholipase a2
- 2qbd.pdb.
ribosome 16-jun-07 2qbd
Mg
Title: crystal structure of the bacterial ribosome from escherichia coli in complex with ribosome recycling factor (rrf). this file contains the 30s subunit of the first 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
Author: m. a. borovinskaya, r. d. pai, w. zhang, b. -s. schuwirth, j. m. holton, g. hirokawa, h. kaji, a. kaji, j. h. d. cate
Keywords: ribosome
- 2qbe.pdb.
ribosome 16-jun-07 2qbe
Mg Zn
Title: crystal structure of the bacterial ribosome from escherichia coli in complex with ribosome recycling factor (rrf). this file contains the 50s subunit of the first 70s ribosome, with rrf bound. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
Author: m. a. borovinskaya, r. d. pai, w. zhang, b. -s. schuwirth, j. m. holton, g. hirokawa, h. kaji, a. kaji, j. h. d. cate
Keywords: ribosome
- 2qbf.pdb.
ribosome 16-jun-07 2qbf
Mg
Title: crystal structure of the bacterial ribosome from escherichia coli in complex with ribosome recycling factor (rrf). this file contains the 30s subunit of the second 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
Author: m. a. borovinskaya, r. d. pai, w. zhang, b. -s. schuwirth, j. m. holton, g. hirokawa, h. kaji, a. kaji, j. h. d. cate
Keywords: ribosome
- 2qbg.pdb.
ribosome 16-jun-07 2qbg
Mg Zn
Title: crystal structure of the bacterial ribosome from escherichia coli in complex with ribosome recycling factor (rrf). this file contains the 50s subunit of the second 70s ribosome, with rrf bound. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
Author: m. a. borovinskaya, r. d. pai, w. zhang, b. -s. schuwirth, j. m. holton, g. hirokawa, h. kaji, a. kaji, j. h. d. cate
Keywords: ribosome
- 2qic.pdb.
antitumor protein, apoptosis 03-jul-07 2qic
Zn
Title: crystal structure of the ing1 phd finger in complex with a histone h3k4me3 peptide
Author: p. v. pena, k. champagne, r. zhao, t. g. kutateladze
Keywords: ing1, histone, h3k4me3, chromatin, antitumor protein, apoptosis
- 2vz0.pdb.
oxidoreductase 29-jul-08 2vz0
Title: pteridine reductase 1 (ptr1) from trypanosoma brucei in complex with nadp and ddd00066641
Author: d. a. robinson, s. thompson, n. sienkiewicz, a. h. fairlamb
Keywords: short-chain dehydrogenase/reductase, trypanosomatids, pteridine reductase
- 2w7x.pdb.
transferase 06-jan-09 2w7x
Mg
Title: cellular inhibition of checkpoint kinase 2 and potentiation of cytotoxic drugs by novel chk2 inhibitor pv1019
Author: a. g. jobson, g. t. lountos, p. l. lorenzi, j. llamas, j. connelly, j. e. tropea, a. onda, s. kondapaka, g. zhang, n. j. caplen, j. h. caredellina, a. monks, c. self, d. s. waugh, r. h. shoemaker, y. pommier
Keywords: potentiation, metal-binding, proto-oncogene, phosphoprotein, chk2 inhibitor
- 2wi8.pdb.
transport protein 08-may-09 2wi8
Cl
Title: crystal structure of the triscatecholate siderophore binding protein feua from bacillus subtilis
Author: f. peuckert, m. miethke, a. g. albrecht, l. -o. essen, m. a. marahiel
Keywords: transport protein, lipoprotein, cell membrane, ion transport
- 2wjm.pdb.
photosynthesis 27-may-09 2wjm
Mg Fe
Title: lipidic sponge phase crystal strucuture of the photosynthetic reaction centre from blastochloris viridis (low dose)
Author: a. b. woehri, w. y. wahlgren, e. malmerberg, l. c. johansson, r. neutze, g. katona
Keywords: photosynthesis, membrane protein, lipids, monoolein, posttranslational modification, thioether bond, ubiquinone, lipidic sponge phase
- 2wjn.pdb.
photosynthesis 27-may-09 2wjn
Mg Fe
Title: lipidic sponge phase crystal structure of photosynthetic reaction centre from blastochloris viridis (high dose)
Author: a. b. wohri, w. y. wahlgren, e. malmerberg, l. c. johansson, r. neutze, g. katona
Keywords: transport, magnesium
- 2wkl.pdb.
hydrolase 15-jun-09 2wkl
Title: velaglucerase alfa
Author: b. brumshtein, p. salinas, b. peterson, v. chan, i. silman, j. l. sussman, p. j. savickas, g. s. robinson, a. h. futerman
Keywords: glycosidase, polymorphism, glycoprotein, alternative splicing, acid-beta-glucosidase, lipid metabolism, disease mutation, velaglucerase alfa
- 2wlv.pdb.
virus protein 26-jun-09 2wlv
Title: structure of the n-terminal capsid domain of hiv-2
Author: a. j. price, f. marzetta, m. lammers, l. m. j. ylinen, t. schaller, s. j. wilson, g. j. towers, l. c. james
Keywords: rna-binding, capsid protein, viral nucleoprotein, hiv, aids, hiv-2, hiv-1
- 2wlw.pdb.
isomerase 26-jun-09 2wlw
Title: structure of the n-terminal capsid domain of hiv-2
Author: a. j. price, f. marzetta, m. lammers, l. m. j. ylinen, t. schaller, s. j. wilson, g. j. towers, l. c. james
Keywords: isomerase, rhesus macaque trim-cyp
- 2wm9.pdb.
cell cycle 30-jun-09 2wm9
Title: structure of the complex between dock9 and cdc42.
Author: j. yang, s. m. roe, d. barford
Keywords: prenylation
- 2wmf.pdb.
hydrolase 30-jun-09 2wmf
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae tigr4 ( sp4gh98) in its native form.
Author: m. a. higgins, g. e. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: glycoside hydrolase, streptococcus pneumoniae, blood group antigen, fucose utilization
- 2wmg.pdb.
hydrolase 30-jun-09 2wmg
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae tigr4 ( sp4gh98) in complex with the lewisy pentasaccharide blood group antigen.
Author: m. a. higgins, g. e. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: glycoside hydrolase, streptococcus pneumoniae, lewisy blood group antigen, fucose utilization
- 2wmh.pdb.
hydrolase 30-jun-09 2wmh
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae tigr4 in complex with the h-disaccharide blood group antigen.
Author: m. a. higgins, g. e. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: glycoside hydrolase, streptococcus pneumoniae, blood group antigen, fucose utilization
- 2wmi.pdb.
hydrolase 30-jun-09 2wmi
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae sp3-bs71 in complex with the a-trisaccharide blood group antigen.
Author: m. a. higgins, g. e. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: streptococcus pneumoniae, hydrolase, fucose utilization, blood group antigen
- 2wmj.pdb.
hydrolase 30-jun-09 2wmj
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae sp3-bs71 (sp3gh98) in complex with the b-trisaccharide blood group antigen.
Author: m. a. higgins, g. e. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: streptococcus pneumoniae, hydrolase, fucose utilization, blood group antigen
- 2wmk.pdb.
hydrolase 30-jun-09 2wmk
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae sp3-bs71 (sp3gh98) in complex with the a-lewisy pentasaccharide blood group antigen.
Author: m. a. higgins, g. e. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: streptococcus pneumoniae, blood group antigen, fucose utilization, hydrolase
- 2wmn.pdb.
cell cycle 02-jul-09 2wmn
Title: structure of the complex between dock9 and cdc42-gdp.
Author: j. yang, s. m. roe, d. barford
Keywords: guanine-nucleotide releasing factor
- 2wo8.pdb.
hydrolase 22-jul-09 2wo8
Zn Ca
Title: mmp12 complex with a beta hydroxy carboxylic acid
Author: i. p. holmes, s. gaines, s. p. watson, o. lorthioir, a. walker, s. j. baddeley, s. herbert, d. egan, m. a. convery, o. m. p. singh, j. w. gross, j. m. strelow, r. h. smith, a. j. amour, d. brown, s. l. martin
Keywords: polymorphism, glycoprotein, metal-binding, matrix metalloprotease mmp-12 complex structure, metalloprotease, extracellular matrix, zymogen, protease, secreted
- 2wo9.pdb.
hydrolase 22-jul-09 2wo9
Zn Ca
Title: mmp12 complex with a beta hydroxy carboxylic acid
Author: i. p. holmes, s. gaines, s. p. watson, o. lorthioir, a. walker, s. j. baddeley, s. herbert, d. egan, m. a. convery, o. m. p. singh, j. w. gross, j. m. strelow, r. h. smith, a. j. amour, d. brown, s. l. martin
Keywords: polymorphism, glycoprotein, metal-binding, matrix metalloprotease mmp-12 complex structure, metalloprotease, extracellular matrix, zymogen, protease, secreted
- 2woa.pdb.
hydrolase 22-jul-09 2woa
Zn Ca
Title: mmp12 complex with a beta hydroxy carboxylic acid
Author: i. p. holmes, s. gaines, s. p. watson, o. lorthioir, a. walker, s. j. baddeley, s. herbert, d. egan, m. a. convery, o. m. p. singh, j. w. gross, j. m. strelow, r. h. smith, a. j. amour, d. brown, s. l. martin
Keywords: polymorphism, glycoprotein, metal-binding, matrix metalloprotease mmp-12 complex structure, disulfide bond, metalloprotease, extracellular matrix, zinc, calcium, zymogen, protease, secreted
- 2woj.pdb.
hydrolase 26-jul-09 2woj
Mg F Zn Al
Title: adp-alf4 complex of s. cerevisiae get3
Author: a. mateja, a. szlachcic, m. e. downing, m. dobosz, m. mariappan, r. s. hegde, r. j. keenan
Keywords: cytoplasm, transport, arsa, arsenite
- 2woo.pdb.
hydrolase 27-jul-09 2woo
Zn
Title: nucleotide-free form of s. pombe get3
Author: a. mateja, a. szlachcic, m. e. downing, m. dobosz, m. mariappan, r. s. hegde, r. j. keenan
Keywords: cytoplasm, transport, arsa, arsenite
- 2yw0.pdb.
lyase 18-apr-07 2yw0
Title: crystal structure of hyluranidase trimer at 2.6 a resolution
Author: r. prem kumar, p. mishra, n. singh, m. perbandt, p. kaur, s. sharma, c. betzel, v. bhakuni, t. p. singh
Keywords: hyaluronidase
- 2zdx.pdb.
transferase 30-nov-07 2zdx
Title: inhibitor-bound structures of human pyruvate dehydrogenase kinase 4
Author: m. kawamoto, i. shiromizu, m. kukimoto-niino, a. tokmakov, t. terada, m. shirouzu, t. matsusue, s. yokoyama
Keywords: kinase, atp-binding, inhibitor, carbohydrate metabolism, glucose metabolism, mitochondrion, phosphoprotein, transferase, transit peptide
- 2zdy.pdb.
transferase 01-dec-07 2zdy
Mg
Title: inhibitor-bound structures of human pyruvate dehydrogenase kinase 4
Author: m. kawamoto, i. shiromizu, m. kukimoto-niino, a. tokmakov, t. terada, m. shirouzu, t. matsusue, s. yokoyama
Keywords: kinase, atp-binding, adp, carbohydrate metabolism, glucose metabolism, mitochondrion, phosphoprotein, transferase, transit peptide
- 2zjf.pdb.
hydrolase 07-mar-08 2zjf
Title: crystal structure of mycobacterium tuberculosis epoxide hydrolase b complexed with an inhibitor
Author: b. k. biswal, tb structural genomics consortium (tbsgc)
Keywords: hydrolase fold, inhibitor, enzyme mechanism, structural genomics, psi, protein structure initiative, tb structural genomics consortium, tbsgc
- 2zjt.pdb.
isomerase 10-mar-08 2zjt
Title: crystal structure of dna gyrase b' domain sheds lights on the mechanism for t-segment navigation
Author: g. s. fu, d. y. zhu, y. l. hu, d. c. wang
Keywords: gyrb-ctd, toprim, tail, dna topoisomerase ii, g- segment, t-segment, atp-binding, nucleotide-binding
- 2zr8.pdb.
isomerase 25-aug-08 2zr8
Mg
Title: crystal structure of modified serine racemase complexed with serine
Author: m. goto
Keywords: lyase, pyridoxal phosphate, isomerase
- 2zzv.pdb.
transport protein 27-feb-09 2zzv
Ca
Title: crystal structure of a periplasmic substrate binding protein in complex with calcium and lactate
Author: n. akiyama, k. takeda, k. miki
Keywords: calcium, lactate, trap transporter, transport protein
- 2zzw.pdb.
transport protein 27-feb-09 2zzw
Zn
Title: crystal structure of a periplasmic substrate binding protein in complex with zinc and lactate
Author: n. akiyama, k. takeda, k. miki
Keywords: zinc, lactate, trap transporter, transport protein
- 2zzx.pdb.
transport protein 27-feb-09 2zzx
Ca
Title: crystal structure of a periplasmic substrate binding protein in complex with lactate
Author: n. akiyama, k. takeda, k. miki
Keywords: lactate, trap transporter, transport protein
- 3a1s.pdb.
transport protein 22-apr-09 3a1s
Mg Se
Title: crystal structue of the cytosolic domain of t. maritima feob iron iransporter in gdp form i
Author: m. hattori, r. ishitani, o. nureki
Keywords: iron transporter, small gtpase, g protein, gdi, transport protein
- 3a1t.pdb.
transport protein 22-apr-09 3a1t
Title: crystal structue of the cytosolic domain of t. maritima feob iron iransporter in gdp form ii
Author: m. hattori, r. ishitani, o. nureki
Keywords: iron transpoter, small gtpase, g protein, gdi, transport protein
- 3a1u.pdb.
transport protein 22-apr-09 3a1u
Mg
Title: crystal structue of the cytosolic domain of t. maritima feob iron iransporter in gmppnp form
Author: m. hattori, r. ishitani, o. nureki
Keywords: iron transpoter, small gtpase, g protein, gdi, transport protein
- 3a1v.pdb.
transport protein 22-apr-09 3a1v
Title: crystal structue of the cytosolic domain of t. maritima feob iron iransporter in apo form
Author: m. hattori, r. ishitani, o. nureki
Keywords: iron transporter, small gtpase, g protein, gdi, transport protein
- 3a1w.pdb.
transport protein 22-apr-09 3a1w
Title: crystal structue of the g domain of t. maritima feob iron iransporter
Author: m. hattori, r. ishitani, o. nureki
Keywords: iron transporter, small gtpase, gdi, g protein, transport protein
- 3a6o.pdb.
hydrolase 07-sep-09 3a6o
Ca
Title: crystal structure of thermoactinomyces vulgaris r-47 alpha- amylase 2/acarbose complex
Author: a. ohtaki, m. mizuno, t. tonozuka, y. sakano, s. kamitori
Keywords: amylase, complex, calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding
- 3bj8.pdb.
transferase 03-dec-07 3bj8
Title: spermine/spermidine n1-acetyltransferase from mouse: crystal structure of a ternary complex reveals solvent-mediated spermine binding
Author: e. j. montemayor, d. w. hoffman
Keywords: coa, spermine, ternary complex, acyltransferase, cytoplasm, transferase
- 3c6w.pdb.
metal binding protein 05-feb-08 3c6w
Zn
Title: crystal structure of the ing5 phd finger in complex with h3k4me3 peptide
Author: k. s. champagne, p. v. pena, k. johnson, t. g. kutateladze
Keywords: phd, ing, epigenetics, histone, alternative splicing, metal-binding, phosphoprotein, zinc, zinc-finger, metal binding protein
- 3c8n.pdb.
oxidoreductase 12-feb-08 3c8n
Se
Title: crystal structure of apo-fgd1 from mycobacterium tuberculosis
Author: g. bashiri, c. j. squire, n. j. moreland, e. n. baker
Keywords: non-prolyl cis-peptide, oxidoreductase
- 3caj.pdb.
lyase 20-feb-08 3caj
Hg Cl Zn
Title: crystal structure of the human carbonic anhydrase ii in complex with ethoxzolamide
Author: a. di fiore, g. de simone
Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
- 3cvh.pdb.
immune system 18-apr-08 3cvh
Title: how tcr-like antibody recognizes mhc-bound peptide
Author: t. mareeva, e. martinez-hackert, y. sykulev
Keywords: tcr, glycoprotein, immune response, membrane, mhc i, transmembrane, acetylation, allergen, phosphoprotein, polymorphism, secreted, immunoglobulin domain, immune system
- 3d7m.pdb.
signaling protein 21-may-08 3d7m
Mg F Al
Title: crystal structure of the g protein fast-exchange double mutant i56c/q333c
Author: m. a. funk, a. m. preininger, w. m. oldham, s. m. meier, h. e. hamm, t. m. iverson
Keywords: allosteric, gtp-binding, lipoprotein, myristate, nucleotide-binding, palmitate, transducer, signaling protein
- 3df6.pdb.
viral protein, unknown function 11-jun-08 3df6
Ca Se
Title: the thermo- and acido-stable orf-99 from the archaeal virus afv1
Author: a. goulet, s. spinelli, d. prangishvili, h. van tilbeurgh, c. cambillau, v. campanacci
Keywords: extremophiles, protein fold, lipothrixviridae, viral protein, unknown function
- 3dho.pdb.
transferase 18-jun-08 3dho
Cl Br
Title: structure of streptogramin aceyltransferase in complex with an inhibitor
Author: s. l. roderick, a. pesaresi, g. d. wright
Keywords: acyltransferase, antibiotic resistance, transferase
- 3djw.pdb.
viral protein, unknown function 24-jun-08 3djw
Title: the thermo- and acido-stable orf-99 from the archaeal virus afv1
Author: a. goulet, s. spinelli, d. prangishvili, h. van tilbeurgh, c. cambillau, v. campanacci
Keywords: extremophiles, protein fold, lipothrixviridae, viral protein, unknown function
- 3eb5.pdb.
apoptosis 27-aug-08 3eb5
Zn Na
Title: structure of the ciap2 ring domain
Author: p. d. mace, k. linke, c. a. smith, c. l. day
Keywords: apoptosis, chromosomal rearrangement, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger
- 3efb.pdb.
transcription 08-sep-08 3efb
Se
Title: crystal structure of probable sor operon regulator from shigella flexneri
Author: y. kim, e. evdokimova, m. kudritska, a. savchenko, a. edwards, w. f. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
Keywords: center for structural genomics of infectious diseases, csgid, transcription
- 3eh0.pdb.
transferase 11-sep-08 3eh0
Title: crystal structure of lpxd from escherichia coli
Author: c. m. bartling, c. r. h. raetz
Keywords: acyltransferase, left-handed parallel beta helix, acyl carrier protein, antibiotic resistance, lipid a biosynthesis, lipid synthesis, transferase
- 3eik.pdb.
transcription 16-sep-08 3eik
Title: double stranded dna binding protein
Author: s. cui, p. wollmann, m. moldt, k. -p. hopfner
Keywords: dna-binding, initiation factor, nucleus, transcription
- 3eis.pdb.
lyase 17-sep-08 3eis
Title: crystal structure of arylmalonate decarboxylase
Author: m. nakasako, r. obata, k. miyamoto, h. ohta
Keywords: decarboxylase, lyase
- 3ewc.pdb.
hydrolase 14-oct-08 3ewc
Zn
Title: crystal structure of adenosine deaminase from plasmodial vivax in complex with mt-coformycin
Author: v. l. schramm, s. c. almo, m. b. cassera, m. ho
Keywords: mt-coformycin, methylthio-coformycin, hydrolase
- 3ewd.pdb.
hydrolase 14-oct-08 3ewd
Zn
Title: crystal structure of adenosine deaminase mutant (delta asp172) from plasmodium vivax in complex with mt-coformycin
Author: v. l. schramm, s. c. almo, m. b. cassera, m. ho
Keywords: mt-coformycin, methylthio-coformycin, hydrolase
- 3f7b.pdb.
lyase 07-nov-08 3f7b
Zn
Title: crystal structure of soluble domain of ca4 in complex with small molecule.
Author: s. e. greasley, r. a. a. ferre, t. a. pauly, r. paz
Keywords: cell membrane, disease mutation, glycoprotein, gpi-anchor, lipoprotein, lyase, membrane, metal-binding, retinitis pigmentosa, sensory transduction, vision, zinc
- 3f7n.pdb.
signaling protein 09-nov-08 3f7n
F Be Mn
Title: crystal structure of chey triple mutant f14e, n59m, e89l complexed with bef3- and mn2+
Author: y. pazy, e. j. collins, r. b. bourret
Keywords: receiver domain, bef3, two-component signal transduction, chemotaxis, cytoplasm, flagellar rotation, magnesium, metal-binding, phosphoprotein, two- component regulatory system, signaling protein
- 3f7u.pdb.
lyase 10-nov-08 3f7u
Zn
Title: crystal structure of soluble domain of ca4 in complex with small molecule.
Author: t. a. pauly, r. a. a. ferre, s. e. greasley, r. paz
Keywords: cell membrane, disease mutation, glycoprotein, gpi-anchor, lipoprotein, lyase, membrane, metal-binding, retinitis pigmentosa, sensory transduction, vision, zinc
- 3fd5.pdb.
transferase 25-nov-08 3fd5
Mg K
Title: crystal structure of human selenophosphate synthetase 1 complex with ampcp
Author: k. t. wang
Keywords: seld, atp-binding, kinase, nucleotide-binding, selenium, transferase
- 3fd6.pdb.
transferase 25-nov-08 3fd6
Mg Na
Title: crystal structure of human selenophosphate synthetase 1 complex with adp and phosphate
Author: k. t. wang
Keywords: seld, atp-binding, kinase, nucleotide-binding, selenium, transferase
- 3fft.pdb.
signaling protein 04-dec-08 3fft
F Be Mn
Title: crystal structure of chey double mutant f14e, e89r complexed with bef3- and mn2+
Author: y. pazy, e. j. collins, r. b. bourret
Keywords: receiver domain, bef3, two-component signal transduction, chemotaxis, cytoplasm, flagellar rotation, magnesium, metal-binding, phosphoprotein, two- component regulatory system, signaling protein
- 3ffw.pdb.
signaling protein 04-dec-08 3ffw
F Be Mn
Title: crystal structure of chey triple mutant f14q, n59k, e89y complexed with bef3- and mn2+
Author: y. pazy, e. j. collins, r. b. bourret
Keywords: receiver domain, bef3, two-component signal transduction, chemotaxis, cytoplasm, flagellar rotation, magnesium, metal-binding, phosphoprotein, two- component regulatory system, signaling protein
- 3ffx.pdb.
signaling protein 04-dec-08 3ffx
F Be Mn
Title: crystal structure of chey triple mutant f14e, n59r, e89h complexed with bef3- and mn2+
Author: y. pazy, e. j. collins, r. b. bourret
Keywords: receiver domain, bef3, two-component signal transduction, chemotaxis, cytoplasm, flagellar rotation, magnesium, metal-binding, phosphoprotein, two- component regulatory system, signaling protein
- 3fga.pdb.
hydrolase 05-dec-08 3fga
Mn
Title: structural basis of pp2a and sgo interaction
Author: z. xu, w. xu
Keywords: chromosome partition, coiled coil, mitosis, ubl conjugation
- 3fgz.pdb.
signaling protein 08-dec-08 3fgz
F Be Mn
Title: crystal structure of chey triple mutant f14e, n59m, e89r complexed with bef3- and mn2+
Author: a. c. wollish, p. j. miller, y. pazy, e. j. collins, r. b. bourret
Keywords: receiver domain, bef3, two-component signal transduction, chemotaxis, cytoplasm, flagellar rotation, magnesium, metal-binding, phosphoprotein, two- component regulatory system, signaling protein
- 3ftq.pdb.
cell cycle 13-jan-09 3ftq
Mg
Title: crystal structure of septin 2 in complex with gppnhp and mg2+
Author: m. sirajuddin, a. wittinghofer
Keywords: filament, cell cycle, cell division, gtp- binding, nucleotide-binding, phosphoprotein
- 3fu7.pdb.
oxidoreductase 14-jan-09 3fu7
Cl Cu
Title: melanocarpus albomyces laccase crystal soaked (4 sec) with 2,6-dimethoxyphenol
Author: j. p. kallio, n. hakulinen, j. rouvinen
Keywords: multicopper oxidase, complex structure, 2,6- dimethoxyphenol, oxidation of phenolic compounds, copper, glycoprotein, lignin degradation, metal-binding, oxidoreductase
- 3fu8.pdb.
oxidoreductase 14-jan-09 3fu8
Cl Cu
Title: melanocarpus albomyces laccase crystal soaked (10 sec) with 2,6-dimethoxyphenol
Author: j. p. kallio, n. hakulinen, j. rouvinen
Keywords: multicopper oxidase, complex structure, 2,6- dimethoxyphenol, oxidation of phenolic compounds, copper, glycoprotein, lignin degradation, metal-binding, oxidoreductase
- 3fu9.pdb.
oxidoreductase 14-jan-09 3fu9
Cl Cu
Title: melanocarpus albomyces laccase crystal soaked (20 min) with 2,6-dimethoxyphenol
Author: j. p. kallio, n. hakulinen, j. rouvinen
Keywords: multicopper oxidase, complex structure, 2,6- dimethoxyphenol, oxidation of phenolic compounds, copper, glycoprotein, lignin degradation, metal-binding, oxidoreductase
- 3g6o.pdb.
signaling protein 07-feb-09 3g6o
Title: crystal structure of p. aeruginosa bacteriophytochrome pabphp photosensory core domain mutant q188l
Author: x. yang, j. kuk, k. moffat
Keywords: pas domain, chromophore, kinase, phosphoprotein, photoreceptor protein, receptor, sensory transduction, transferase, signaling protein
- 3g77.pdb.
hydrolase 09-feb-09 3g77
Fe
Title: bacterial cytosine deaminase v152a/f316c/d317g mutant
Author: b. stoddard, l. zhao
Keywords: protein engineering, cytosine metabolism, hydrolase, iron, metal-binding
- 3g7f.pdb.
photosynthesis 09-feb-09 3g7f
Mg Fe
Title: crystal structure of blastochloris viridis heterodimer mutant reaction center
Author: n. s. ponomarenko, l. li, v. tereshko, r. f. ismagilov, j. r. norris jr.
Keywords: photosynthesis, reaction center, transport, bacteriochlorophyll, chlorophyll, chromophore, formylation, transmembrane, magnesium
- 3g9g.pdb.
endocytosis 13-feb-09 3g9g
Title: crystal structure of the n-terminal efc/f-bar domain of syp1
Author: a. reider, s. barker, s. mishra, y. j. im, l. maldonado-baez, j. hurley, l. traub, b. wendland
Keywords: bar domain, fch, adaptor, endocytosis, phosphoprotein
- 3g9h.pdb.
endocytosis 13-feb-09 3g9h
Title: crystal structure of the c-terminal mu homology domain of syp1
Author: a. reider, s. barker, s. mishra, y. j. im, l. maldonado-baez, j. hurley, l. traub, b. wendland
Keywords: mu, adaptor, endocytosis, phosphoprotein
- 3gbi.pdb.
dna 19-feb-09 3gbi
Title: the rational design and structural analysis of a self- assembled three-dimensional dna crystal
Author: j. j. birktoft, j. zheng, n. c. seeman
Keywords: dna crystals, dna crossover, designed crystal lattice
- 3gbo.pdb.
hydrolase 20-feb-09 3gbo
Zn Ca
Title: crystal structure of bmoompalpha-i, a non-hemorrhagic metalloproteinase isolated from bothrops moojeni snake venom
Author: p. k. akao, c. c. c. tonoli, m. t. murakami
Keywords: hydrolase, metal-binding, metalloprotease, protease, secreted, toxin, zinc
- 3gfq.pdb.
oxidoreductase 27-feb-09 3gfq
Title: structure of yhda, k109l variant
Author: n. staunig, k. gruber
Keywords: quinone reductase, flavodoxin, oligomerization, flavoprotein, fmn, nadp, oxidoreductase
- 3gfr.pdb.
oxidoreductase 27-feb-09 3gfr
Title: structure of yhda, d137l variant
Author: n. staunig, k. gruber
Keywords: quinone reductase, flavodoxin, oligomerization, flavoprotein, fmn, nadp, oxidoreductase
- 3gfs.pdb.
oxidoreductase 27-feb-09 3gfs
Title: structure of yhda, k109d/d137k variant
Author: n. staunig, k. gruber
Keywords: quinone reductase, flavodoxin, oligomerization, flavoprotein, fmn, nadp, oxidoreductase
- 3ghc.pdb.
oxidoreductase 03-mar-09 3ghc
Title: design, synthesis, and x-ray crystal structure of classical and nonclassical 2-amino-4-oxo-5-substituted-6-thieno[2,3- d]pyrimidines as dual thymidylate synthase and dihydrofolate reductase inhibitors and as potential antitumor agenst
Author: v. cody
Keywords: nadp, one-carbon metabolism, oxidoreductase
- 3ghv.pdb.
oxidoreductase 04-mar-09 3ghv
Title: human dihydrofolate reductase q35k/n64f double mutant inhibitor complex
Author: v. cody
Keywords: folate enzyme, active site mutants, nadp, one-carbon metabolism, oxidoreductase
- 3ghw.pdb.
oxidoreductase 04-mar-09 3ghw
Title: human dihydrofolate reductase inhibitor complex
Author: v. cody
Keywords: nadp, one- carbon metabolism, oxidoreductase
- 3ghx.pdb.
lyase 04-mar-09 3ghx
Mn
Title: product complex of adenylate cyclase class iv
Author: d. t. gallagher, p. t. reddy
Keywords: antiparallel barrel, product complex, cyclic amp, lyase
- 3gk9.pdb.
oxygen storage/transport protein 10-mar-09 3gk9
Fe Xe
Title: crystal structure of murine ngb under xe pressure
Author: t. moschetti, u. mueller, j. schultze, m. brunori, b. vallone
Keywords: xenon sites, oxygen storage/transport protein complex, heme, iron, metal-binding, oxygen transport, transport
- 3gke.pdb.
oxidoreductase 10-mar-09 3gke
Fe
Title: crystal structure of dicamba monooxygenase
Author: m. a. wilson, r. dumitru, w. z. jiang, d. p. weeks
Keywords: non-heme mononuclear iron, oxygenase, oxidoreductase
- 3gkt.pdb.
oxygen storage/transport protein 11-mar-09 3gkt
Kr Fe
Title: crystal structure of murine neuroglobin under kr pressure
Author: t. moschetti, u. mueller, j. schultze, m. brunori, b. vallone
Keywords: neuroglobin, krypton, oxygen storage/transport protein complex, heme, iron, metal-binding, oxygen transport, transport
- 3gl0.pdb.
oxidoreductase 11-mar-09 3gl0
Cl Fe
Title: crystal structure of dicamba monooxygenase bound to 3,6 dichlorosalicylic acid (dcsa)
Author: m. a. wilson, r. dumitru, w. z. jiang, d. p. weeks
Keywords: non-heme mononuclear iron, oxygenase, oxidoreductase
- 3gl2.pdb.
oxidoreductase 11-mar-09 3gl2
Cl Fe
Title: crystal structure of dicamba monooxygenase bound to dicamba
Author: m. a. wilson, r. dumitru, w. z. jiang, d. p. weeks
Keywords: non-heme mononuclear iron, oxygenase, oxidoreductase
- 3gln.pdb.
oxygen storage/transport protein 12-mar-09 3gln
Fe Xe
Title: carbonmonoxy ngb under xenon pressure
Author: t. moschetti, u. mueller, j. schultze, m. brunori, b. vallone
Keywords: hemeprotein, xenon binding, cavities, oxygen storage/transport protein complex, heme, iron, metal- binding, oxygen transport, transport
- 3gm5.pdb.
isomerase 12-mar-09 3gm5
Title: crystal structure of a putative methylmalonyl-coenzyme a epimerase from thermoanaerobacter tengcongensis at 2.0 a resolution
Author: d. -c. liang, l. shi, p. gao, x. -x. yan
Keywords: isomerase
- 3gn8.pdb.
hormone/hormone activator 16-mar-09 3gn8
F
Title: x-ray crystal structure of ancgr2 in complex with dexamethasone
Author: e. a. ortlund
Keywords: gr2, evolution, glucocorticoid receptor, dexamethasone, cortisol, activator, nucleus, phosphoprotein, polymorphism, transcription, transcription regulation, hormone/hormone activator complex
- 3guq.pdb.
toxin 30-mar-09 3guq
Title: crystal structure of novel carcinogenic factor of h. pylori
Author: t. tsurumura, h. tsuge, h. utsunomiya, d. kise, t. kuzuhara, h. fujiki, m. suganuma
Keywords: long alpha helix, novel carcinogenic factor, toxin
- 3h76.pdb.
transferase 24-apr-09 3h76
Title: crystal structure of pqsd, a key enzyme in pseudomonas aeruginosa quinolone signal biosynthesis pathway
Author: a. k. bera, v. atanasova, j. f. parsons
Keywords: pqs, anthraniloyl-coa, anthranilic acid, transferase
- 3h77.pdb.
transferase 24-apr-09 3h77
Title: crystal structure of pseudomonas aeruginosa pqsd in a covalent complex with anthranilate
Author: a. k. bera, v. atanasova, j. f. parsons
Keywords: pqs, anthraniloyl-coa, anthranilic acid, anthranilate modified cys, transferase
- 3h78.pdb.
transferase 24-apr-09 3h78
Title: crystal structure of pseudomonas aeruginosa pqsd c112a mutant in complex with anthranilic acid
Author: a. k. bera, v. atanasova, j. f. parsons
Keywords: pqs, anthranilic acid, anthraniloyl-coa, transferase
- 3h7j.pdb.
biosynthetic protein 27-apr-09 3h7j
Co Fe
Title: crystal structure of bacb, an enzyme involved in bacilysin synthesis, in monoclinic form
Author: m. rajavel, b. gopal
Keywords: ywfc, bacilysin synthesis, anticapsin synthesis, bi- cupin, double stranded beta helix, antibiotic biosynthesis, biosynthetic protein
- 3h7p.pdb.
signaling protein 28-apr-09 3h7p
Cd
Title: crystal structure of k63-linked di-ubiquitin
Author: s. d. weeks, k. c. grasty, l. hernandez-cuebas, p. j. loll
Keywords: isopeptide, k63-linked, polyubiquitin, cytoplasm, isopeptide bond, nucleus, phosphoprotein, ubl conjugation, signaling protein
- 3h7s.pdb.
signaling protein 28-apr-09 3h7s
Zn
Title: crystal structures of k63-linked di- and tri-ubiquitin reveal a highly extended chain architecture
Author: s. d. weeks, k. c. grasty, l. hernandez-cuebas, p. j. loll
Keywords: isopeptide, k63-linked, polyubiquitin, cytoplasm, isopeptide bond, nucleus, phosphoprotein, ubl conjugation, signaling protein
- 3h7y.pdb.
biosynthetic protein 28-apr-09 3h7y
Co Fe
Title: crystal structure of bacb, an enzyme involved in bacilysin synthesis, in tetragonal form
Author: m. rajavel, b. gopal
Keywords: ywfc, bacilysin synthesis, anticapsin synthesis, bi- cupin, double stranded beta helix, antibiotic biosynthesis, biosynthetic protein
- 3han.pdb.
transport protein 02-may-09 3han
Title: crystal structure of bacteriorhodopsin mutant v49a crystallized from bicelles
Author: n. h. joh, d. yang, j. u. bowie
Keywords: ion transport, membrane, photoreceptor protein, pyrrolidone carboxylic acid, receptor, retinal protein, sensory transduction, transmembrane, transport, transport protein
- 3hao.pdb.
transport protein 02-may-09 3hao
Title: crystal structure of bacteriorhodopsin mutant l94a crystallized from bicelles
Author: n. h. joh, d. yang, j. u. bowie
Keywords: ion transport, membrane, photoreceptor protein, pyrrolidone carboxylic acid, receptor, retinal protein, sensory transduction, transmembrane, transport, transport protein
- 3hap.pdb.
transport protein 02-may-09 3hap
Title: crystal structure of bacteriorhodopsin mutant l111a crystallized from bicelles
Author: n. h. joh, d. yang, j. u. bowie
Keywords: ion transport, membrane, photoreceptor protein, pyrrolidone carboxylic acid, receptor, retinal protein, sensory transduction, transmembrane, transport, transport protein
- 3haq.pdb.
transport protein 02-may-09 3haq
Title: crystal structure of bacteriorhodopsin mutant i148a crystallized from bicelles
Author: n. h. joh, d. yang, j. u. bowie
Keywords: ion transport, membrane, photoreceptor protein, pyrrolidone carboxylic acid, receptor, retinal protein, sensory transduction, transmembrane, transport, transport protein
- 3har.pdb.
transport protein 02-may-09 3har
Title: crystal structure of bacteriorhodopsin mutant i148v crystallized from bicelles
Author: n. h. joh, d. yang, j. u. bowie
Keywords: ion transport, membrane, photoreceptor protein, pyrrolidone carboxylic acid, receptor, retinal protein, sensory transduction, transmembrane, transport, transport protein
- 3has.pdb.
transport protein 02-may-09 3has
Title: crystal structure of bacteriorhodopsin mutant l152a crystallized from bicelles
Author: n. h. joh, d. yang, j. u. bowie
Keywords: ion transport, membrane, photoreceptor protein, pyrrolidone carboxylic acid, receptor, retinal protein, sensory transduction, transmembrane, transport, transport protein
- 3hhp.pdb.
oxidoreductase 15-may-09 3hhp
Title: malate dehydrogenase open conformation
Author: j. zaitseva, k. m. meneely, a. l. lamb
Keywords: mdh, citric acid cycle, tca cycle, nad, oxidoreductase, tricarboxylic acid cycle
- 3hi5.pdb.
immune system 18-may-09 3hi5
Title: crystal structure of fab fragment of al-57
Author: h. zhang, j. wang
Keywords: ligand mimetic, integrin, i domain, cell adhesion, immune system
- 3hi6.pdb.
cell adhesion/immune system 19-may-09 3hi6
Mn
Title: crystal structure of intermediate affinity i domain of integrin lfa-1 with the fab fragment of its antibody al-57
Author: h. zhang, j. wang
Keywords: cell adhesion/immune system complex
- 3hjm.pdb.
transferase 22-may-09 3hjm
Cl Ca
Title: crystal structure of human glutathione transferase pi y108v mutant
Author: l. j. parker
Keywords: glutathione, detoxification, mutant, polymorphism
- 3hjo.pdb.
transferase 22-may-09 3hjo
Cl Ca
Title: crystal structure of glutathione transferase pi y108v mutant in complex with the glutathione conjugate of ethacrynic acid
Author: l. j. parker
Keywords: glutathione, detoxification, ethacrynic acid, ethacrynic acid-glutathione conjugate, polymorphism
- 3hk1.pdb.
protein binding 22-may-09 3hk1
Title: identification and characterization of a small molecule inhibitor of fatty acid binding proteins
Author: a. v. hertzel, k. hellberg, j. m. reynolds, a. c. kruse, b. e. juhlmann, a. j. smith, m. a. sanders, d. h. ohlendorf, j. suttles, d. a. bernlohr
Keywords: fatty acid binding protein, cytoplasm, lipid-binding, nucleus, phosphoprotein, transport, protein binding
- 3hkr.pdb.
transferase 25-may-09 3hkr
Ca
Title: crystal structure of glutathione transferase pi y108v mutant
Author: l. j. parker
Keywords: glutathione, detoxification
- 3hl4.pdb.
transferase 26-may-09 3hl4
Title: crystal structure of a mammalian ctp:phosphocholine cytidylyltransferase with cdp-choline
Author: j. lee, m. paetzel, r. b. cornell
Keywords: rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, ctp, cdp-choline, amphitropic protein, lipid metabolism, nucleotidyltransferase, phosphoprotein, transferase
- 3hos.pdb.
transferase, dna binding protein/dna 03-jun-09 3hos
Mg
Title: crystal structure of the mariner mos1 paired end complex with mg
Author: j. m. richardson, m. d. walkinshaw
Keywords: synaptic complex, transposase, inverted repeat dna, dna binding protein/dna complex, transferase
- 3hot.pdb.
transferase, dna binding protein/dna 03-jun-09 3hot
Mn I
Title: crystal structure of the mos1 mariner paired end complex with mn
Author: j. m. richardson, m. d. walkinshaw
Keywords: synaptic complex, transposase, inverted repeat dna, dna binding protein/dna complex, transferase
- 3hq6.pdb.
oxidoreductase 05-jun-09 3hq6
Fe Ca
Title: cytochrome c peroxidase from g. sulfurreducens, wild type
Author: m. hoffmann, j. seidel, o. einsle
Keywords: oxidoreductase, peroxidase
- 3hq7.pdb.
oxidoreductase 05-jun-09 3hq7
Fe Ca
Title: ccpa from g. sulfurreducens, g94k/k97q/r100i variant
Author: m. hoffmann, j. seidel, o. einsle
Keywords: oxidoreductase, peroxidase
- 3hq8.pdb.
oxidoreductase 05-jun-09 3hq8
Fe Ca
Title: ccpa from g. sulfurreducens s134p/v135k variant
Author: m. hoffmann, j. seidel, o. einsle
Keywords: oxidoreductase, peroxidase
- 3hq9.pdb.
oxidoreductase 05-jun-09 3hq9
Fe Ca
Title: ccpa from g. sulfurreducens, s134p variant
Author: m. hoffmann, j. seidel, o. einsle
Keywords: oxidoreductase, peroxidase
- 3hqf.pdb.
hydrolase/dna 06-jun-09 3hqf
Title: crystal structure of restriction endonuclease ecorii n- terminal effector-binding domain in complex with cognate dna
Author: d. golovenko, e. manakova, s. grazulis, g. tamulaitiene, v. siksnys
Keywords: ecorii, dna-binding pseudobarrel fold, protein-dna complex, dna recognition, endonuclease, plasmid, hydrolase/dna complex
- 3hqg.pdb.
hydrolase/dna 06-jun-09 3hqg
Title: crystal structure of restriction endonuclease ecorii catalytic c-terminal domain in complex with cognate dna
Author: d. golovenko, e. manakova, s. grazulis, g. tamulaitiene, v. siksnys
Keywords: ecorii, nucleotide flipping, protein-dna complex, dna recognition, endonuclease, hydrolase, magnesium, nuclease, restriction system, hydrolase/dna complex
- 3hqw.pdb.
hydrolase/hydrolase inhibitor 08-jun-09 3hqw
Mg Zn
Title: discovery of novel inhibitors of pde10a
Author: j. pandit, e. s. marr
Keywords: allosteric enzyme, alternative splicing, camp, camp-binding, cgmp, cgmp-binding, cytoplasm, hydrolase, magnesium, metal- binding, nucleotide-binding, zinc, hydrolase/hydrolase inhibitor complex
- 3hqy.pdb.
hydrolase/hydrolase inhibitor 08-jun-09 3hqy
Mg Zn
Title: discovery of novel inhibitors of pde10a
Author: j. pandit, e. s. marr
Keywords: allosteric enzyme, alternative splicing, camp, camp-binding, cgmp, cgmp-binding, cytoplasm, hydrolase, magnesium, metal- binding, nucleotide-binding, zinc, hydrolase/hydrolase inhibitor complex
- 3hqz.pdb.
hydrolase/hydrolase inhibitor 08-jun-09 3hqz
Mg Zn
Title: discovery of novel inhibitors of pde10a
Author: j. pandit, e. s. marr
Keywords: allosteric enzyme, alternative splicing, camp, camp-binding, cgmp, cgmp-binding, cytoplasm, hydrolase, magnesium, metal- binding, nucleotide-binding, zinc, hydrolase/hydrolase inhibitor complex
- 3hr1.pdb.
hydrolase/hydrolase inhibitor 08-jun-09 3hr1
Mg Zn
Title: discovery of novel inhibitors of pde10a
Author: j. pandit, e. s. marr
Keywords: hydrolase/hydrolase inhibitor complex
- 3hrm.pdb.
transcription regulator 09-jun-09 3hrm
Se
Title: crystal structure of staphylococcus aureus protein sarz in sulfenic acid form
Author: c. b. poor, e. duguid, p. a. rice, c. he
Keywords: cysteine sulfenic acid, marr-family transcriptional regulator, dna-binding, transcription, transcription regulation, transcription regulator
- 3hse.pdb.
transcription regulator 10-jun-09 3hse
Title: crystal structure of staphylococcus aureus protein sarz in reduced form
Author: c. b. poor, e. duguid, p. a. rice, c. he
Keywords: marr-family transcriptional regulator, dna-binding, transcription, transcription regulation, transcription regulator
- 3hsr.pdb.
transcription regulator 10-jun-09 3hsr
Title: crystal structure of staphylococcus aureus protein sarz in mixed disulfide form
Author: c. b. poor, e. duguid, p. a. rice, c. he
Keywords: cysteine disulfide, marr-family transcriptional regulator, dna-binding, transcription, transcription regulation, transcription regulator
- 3hus.pdb.
blood clotting 15-jun-09 3hus
Ca
Title: crystal structure of recombinant gamma n308k fibrinogen fragment d with the peptide ligand gly-pro-arg-pro-amide
Author: s. t. lord, s. r. bowley, n. okumura
Keywords: pyrrolidone carboxylic acid, calcium, sulfation, blood clotting
- 3i1k.pdb.
hydrolase 26-jun-09 3i1k
Title: structure of porcine torovirus hemagglutinin-esterase
Author: q. h. zeng, e. g. huizinga
Keywords: swiss roll, envelope protein, glycoprotein, hemagglutinin, membrane, transmembrane, virion
- 3i1l.pdb.
hydrolase 26-jun-09 3i1l
Title: structure of porcine torovirus hemagglutinin-esterase in complex with its receptor
Author: q. h. zeng, e. g. huizinga
Keywords: swiss roll, envelope protein, glycoprotein, hemagglutinin, membrane, transmembrane, virion
- 3i26.pdb.
hydrolase 29-jun-09 3i26
Title: structure of bovine torovirus hemagglutinin-esterase
Author: q. h. zeng, e. g. huizinga
Keywords: swiss roll, envelope protein, glycoprotein, hemagglutinin, membrane, transmembrane, virion, cell membrane, hydrolase
- 3i27.pdb.
hydrolase 29-jun-09 3i27
Title: structure of bovine torovirus hemagglutinin-esterase in complex with receptor
Author: q. h. zeng, e. g. huizinga
Keywords: swiss roll, envelope protein, glycoprotein, hemagglutinin, membrane, transmembrane, virion, cell membrane, hydrolase
- 3i2d.pdb.
ligase 29-jun-09 3i2d
Zn
Title: crystal structure of s. cerevisiae sumo e3 ligase siz1
Author: c. d. lima, a. a. yunus
Keywords: signal transduction, replication, ring e3, pias, siz, ubiquitin, ubc9, cytoplasm, ligase, metal-binding, nucleus, phosphoprotein, ubl conjugation, ubl conjugation pathway, zinc, zinc-finger
- 3i31.pdb.
rna binding protein,hydrolase 30-jun-09 3i31
Zn Na
Title: hera helicase rna binding domain is an rrm fold
Author: m. g. rudolph, d. klostermeier
Keywords: rna recognition motif, atp-binding, helicase, nucleotide-binding, rna binding protein,hydrolase
- 3i32.pdb.
rna binding protein,hydrolase 30-jun-09 3i32
Br
Title: dimeric structure of a hera helicase fragment including the c-terminal reca domain, the dimerization domain, and the rna binding domain
Author: m. g. rudolph, d. klostermeier
Keywords: atpase, dimer, rna recognition motif, atp- binding, helicase, nucleotide-binding, rna binding protein, hydrolase
- 3i3n.pdb.
protein binding 30-jun-09 3i3n
Cl Se
Title: crystal structure of the btb-back domains of human klhl11
Author: j. w. murray, c. d. o. cooper, t. krojer, p. mahajan, e. salah, t. keates, p. savitsky, a. c. w. pike, a. roos, j. muniz, f. von delft, c. bountra, c. h. arrowsmith, j. weigelt, a. edwards, s. knapp, a. bullock, structural genomics consortium (sgc)
Keywords: btb, klhl11a, sgc, structural genomics consortium, kelch repeat, secreted, protein binding
- 3i4h.pdb.
hydrolase 01-jul-09 3i4h
Title: crystal structure of cas6 in pyrococcus furiosus
Author: j. carte, r. wang, h. li, r. m. terns, m. p. terns
Keywords: hydrolase
- 3i5k.pdb.
transferase 05-jul-09 3i5k
Title: crystal structure of the ns5b polymerase from hepatitis c virus (hcv) strain jfh1
Author: p. c. simister, m. schmitt, v. lohmann, s. bressanelli
Keywords: thiol protease, transcription, transcription regulation, transferase, transmembrane, ubl conjugation, viral nucleoprotein, virion, zinc
- 3i8z.pdb.
transcription 10-jul-09 3i8z
Title: crystal structure of human chromobox homolog 4 (cbx4)
Author: m. f. amaya, l. zhihong, p. loppnau, i. kozieradzki, a. m. edwards, c. h. arrowsmith, j. weigelt, c. bountra, a. bochkarev, j. min, h. ouyang, structural genomics consortium (sgc)
Keywords: ubl conjugation, ubl conjugation pathway
- 3i90.pdb.
transcription 10-jul-09 3i90
Title: crystal structure of human chromobox homolog 6 (cbx6) with h3k27 peptide
Author: m. f. amaya, m. ravichandran, p. loppnau, i. kozieradzki, a. m. edwards, c. h. arrowsmith, j. weigelt, c. bountra, a. bochkarev, j. min, h. ouyang, structural genomics consortium (sgc)
Keywords: cbx6, h3k27 peptide, structural genomics, structural genomics consortium, sgc, chromatin regulator, nucleus, phosphoprotein, repressor, transcription, transcription regulation
- 3i91.pdb.
transcription 10-jul-09 3i91
Title: crystal structure of human chromobox homolog 8 (cbx8) with h3k9 peptide
Author: m. f. amaya, m. ravichandran, p. loppnau, i. kozieradzki, a. m. edwards, c. h. arrowsmith, j. weigelt, c. bountra, a. bochkarev, j. min, h. ouyang, structural genomics consortium (sgc)
Keywords: cbx8, h3k9 peptide, structural genomics, structural genomics consortium, sgc, chromatin regulator, nucleus, phosphoprotein, polymorphism, repressor, transcription, transcription regulation
- 3iay.pdb.
transferase/dna 15-jul-09 3iay
Ca
Title: ternary complex of dna polymerase delta
Author: m. k. swan, a. k. aggarwal
Keywords: zinc-finger, transferase/dna complex
- 3ibi.pdb.
lyase 16-jul-09 3ibi
Cl Hg Zn
Title: the crystal structure of the human carbonic anhydrase ii in complex with an aliphatic sulfamate inhibitor
Author: v. alterio, g. de simone
Keywords: protein-inhibitor complex, aliphatic sulfamate inhibitor, acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
- 3ibl.pdb.
lyase 16-jul-09 3ibl
Cl Hg Zn
Title: the crystal structure of the human carbonic anhydrase ii in complex with an aliphatic bis-sulfamate inhibitor
Author: v. alterio, g. de simone
Keywords: protein-inhibitor complex, aliphatic bis-sulfamate inhibitor, acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
- 3ibn.pdb.
lyase 16-jul-09 3ibn
Hg Cl Zn
Title: the crystal structure of the human carbonic anhydrase ii in complex with an aliphatic bis-sulfamate inhibitor
Author: v. alterio, g. de simone
Keywords: protein-inhibitor complex, aliphatic bis-sulfamate inhibitor, acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
- 3ibr.pdb.
transferase 16-jul-09 3ibr
Se
Title: crystal structure of p. aeruginosa bacteriophytochrome photosensory core module mutant q188l in the mixed pr/pfr state
Author: x. yang, j. kuk, k. moffat
Keywords: red-light photoreceptor, photoconversion, chromophore, atp-binding, kinase, nucleotide-binding, phosphoprotein, photoreceptor protein, receptor, sensory transduction, transferase
- 3ibu.pdb.
lyase 17-jul-09 3ibu
Cl Hg Zn
Title: the crystal structure of the human carbonic anhydrase ii in complex with an aliphatic sulfamate inhibitor
Author: v. alterio, g. de simone
Keywords: protein-inhibitor complex, aliphatic sulfamate inhibitor, acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
- 3ic1.pdb.
hydrolase 17-jul-09 3ic1
Zn
Title: crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from haemophilus influenzae
Author: b. nocek, d. gillner, r. holz, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: diaminopimelate biosynthesis, hydrolase, lysine biosynthesis, metal-binding, zinc
- 3ic3.pdb.
oxidoreductase 17-jul-09 3ic3
K Na Se
Title: structure of a putative pyruvate dehydrogenase from the photosynthetic bacterium rhodopseudomonas palustrus cga009
Author: m. e. cuff, c. tesar, r. jedrzejczak, j. b. mckinlay, c. s. harwood, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: pyruvate dehydrogenase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, oxidoreductase
- 3ief.pdb.
transferase, rna binding protein 22-jul-09 3ief
Title: crystal structure of trna guanine-n1-methyltransferase from bartonella henselae using mpcs.
Author: t. e. edwards, g. stahl, c. j. gerdts, b. l. staker, accelerated technologies center for gene to 3d structure (atcg3d), seattle structural genomics center for infectious disease (ssgcid)
Keywords: accelerated technologies center for gene to 3d structure, atcg3d, cytoplasm, methyltransferase, s-adenosyl-l- methionine, transferase, trna processing, protein knot, rna binding protein
- 3ift.pdb.
oxidoreductase 25-jul-09 3ift
Title: crystal structure of glycine cleavage system protein h from mycobacterium tuberculosis, using x-rays from the compact light source.
Author: t. e. edwards, j. abendroth, b. staker, c. mayer, i. phan, a. kelley, e. analau, d. leibly, j. rifkin, r. loewen, r. ruth, l. stewart, accelerated technologies center for gene to 3d structure (atcg3d)
Keywords: seattle structural genomics center for infectious disease, lipoyl, methylamine binding protein, oxidoreductase
- 3ig3.pdb.
signaling protein, membrane protein 27-jul-09 3ig3
Title: crystal strucure of mouse plexin a3 intracellular domain
Author: h. he, x. zhang
Keywords: membrane, transmembrane, membrane protein, signaling protein
- 3iix.pdb.
adomet binding protein 03-aug-09 3iix
Cl Fe
Title: x-ray structure of the fefe-hydrogenase maturase hyde from t. maritima in complex with methionine and 5'deoxyadenosine
Author: y. nicolet, p. amara, j. m. mouesca, j. c. fontecilla-camps
Keywords: sam radical, adomet cleavage, fe4s4 cluster, hyde, hydrogenase, maturation, beta barrel, deoxyadenosine, adomet binding protein
- 3iiz.pdb.
adomet binding protein 03-aug-09 3iiz
Cl Fe
Title: x-ray structure of the fefe-hydrogenase maturase hyde from t. maritima in complex with s-adenosyl-l-methionine
Author: y. nicolet, p. amara, j. m. mouesca, j. c. fontecilla-camps
Keywords: sam radical, hyde, hydrogenase, fe4s4 cluster, adomet cleavage, maturation, adenosylmethionine, adomet binding protein
- 3ijm.pdb.
structural genomics, unknown function 04-aug-09 3ijm
Na Se
Title: the structure of a restriction endonuclease-like fold superfamily protein from spirosoma linguale.
Author: m. e. cuff, c. tesar, s. samano, j. bearden, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: cyanobacteria, pd(d/e)xk superfamily, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3ijo.pdb.
membrane protein 04-aug-09 3ijo
Cl Zn
Title: crystal structure of the ampa subunit glur2 bound to the allosteric modulator, althiazide
Author: c. p. ptak, a. h. ahmed, r. e. oswald
Keywords: lipoprotein, membrane, palmitate, phosphoprotein, postsynaptic cell membrane, receptor, rna editing, synapse, transmembrane, transport, membrane protein
- 3ijx.pdb.
membrane protein 05-aug-09 3ijx
Cl Zn
Title: crystal structure of the ampa subunit glur2 bound to the allosteric modulator, hydrochlorothiazide
Author: c. p. ptak, a. h. ahmed, r. e. oswald
Keywords: glur2, ampa receptor, neurotransmitter receptor, s1s2, allosteric modulator, membrane protein
- 3ik6.pdb.
membrane protein 05-aug-09 3ik6
Cl Zn
Title: crystal structure of the ampa subunit glur2 bound to the allosteric modulator, chlorothiazide
Author: c. p. ptak, a. h. ahmed, r. e. oswald
Keywords: glur2, ampa receptor, neurotransmitter receptor, s1s2, allosteric modulator, membrane protein
- 3ik8.pdb.
isomerase 05-aug-09 3ik8
Title: structure-based design of novel pin1 inhibitors (i)
Author: d. matthews, s. greasley, r. a. ferre, h. parge
Keywords: ppiase, cell cycle, isomerase, nucleus, phosphoprotein, rotamase
- 3ikd.pdb.
isomerase 05-aug-09 3ikd
Title: structure-based design of novel pin1 inhibitors (i)
Author: d. matthews, s. greasley, r. ferre, h. parge
Keywords: ppiase, cell cycle, isomerase, small molecule, nucleus, phosphoprotein, rotamase
- 3ikg.pdb.
isomerase 05-aug-09 3ikg
Title: structure-based design of novel pin1 inhibitors (i)
Author: h. parge, r. a. ferre, samantha greasley, dave matthews
Keywords: ppiase, cell cycle, isomerase, small molecule, nucleus, phosphoprotein, rotamase, peptidyl-prolyl cis- trans isomerase
- 3il1.pdb.
membrane protein 06-aug-09 3il1
Cl Zn
Title: crystal structure of the ampa subunit glur2 bound to the allosteric modulator, idra-21
Author: a. h. ahmed, c. p. ptak, r. e. oswald
Keywords: lipoprotein, membrane, palmitate, phosphoprotein, postsynaptic cell membrane, receptor, rna editing, synapse, transmembrane, transport, membrane protein
- 3ilm.pdb.
structural genomics, unknown function 07-aug-09 3ilm
Mn Se
Title: crystal structure of the alr3790 protein from anabaena sp. northeast structural genomics consortium target nsr437h
Author: s. vorobiev, y. chen, m. maglaqui, c. ciccosanti, l. mao, r. xiao, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: rhodanese-like, nsr437h, nesg, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, unknown function
- 3ilt.pdb.
signaling protein 07-aug-09 3ilt
Cl Zn
Title: crystal structure of the ampa subunit glur2 bound to the allosteric modulator, trichlormethiazide
Author: a. h. ahmed, c. p. ptak, r. e. oswald
Keywords: glur2, ampa receptor, neurotransmitter receptor, s1s2, allosteric modulator, signaling protein
- 3ilu.pdb.
membrane protein 07-aug-09 3ilu
F Zn
Title: crystal structure of the ampa subunit glur2 bound to the allosteric modulator, hydroflumethiazide
Author: a. h. ahmed, c. p. ptak, r. e. oswald
Keywords: glur2, ampa receptor, neurotransmitter receptor, s1s2, allosteric modulator, membrane protein
- 3iml.pdb.
transferase 10-aug-09 3iml
Title: crystal structure of s-adenosylmethionine synthetase from burkholderia pseudomallei
Author: b. l. staker
Keywords: seattle structural genomics center for infectious disease, ssgcid
- 3inr.pdb.
isomerase 12-aug-09 3inr
Title: structure of udp-galactopyranose mutase bound to udp- galactose (oxidized)
Author: t. d. gruber, l. l. kiessling, k. t. forest
Keywords: protein-ligand complex, carbohydrate biosynthesis, isomerase, fad, flavoprotein, lipopolysaccharide biosynthesis
- 3int.pdb.
isomerase 12-aug-09 3int
Title: structure of udp-galactopyranose mutase bound to udp- galactose (reduced)
Author: t. d. gruber, l. l. kiessling, k. t. forest
Keywords: protein-ligand complex, carbohydrate biosynthesis, isomerase, fad, flavoprotein, lipopolysaccharide biosynthesis
- 3ipr.pdb.
transferase 18-aug-09 3ipr
Ca
Title: crystal structure of the enterococcus faecalis gluconate specific eiia phosphotransferase system component
Author: s. reinelt, s. welti, k. scheffzek
Keywords: transferase
- 3iqt.pdb.
transferase 20-aug-09 3iqt
Ca Se
Title: structure of the hpt domain of sensor protein bara from escherichia coli cft073.
Author: m. e. cuff, e. rakowski, y. kim, l. freeman, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: phosphoprotein, transcription, transcription regulation, transferase, transmembrane, two-component regulatory system
- 3ir3.pdb.
lyase 21-aug-09 3ir3
Title: crystal structure of human 3-hydroxyacyl-thioester dehydratase 2 (htd2)
Author: e. ugochukwu, r. cocking, n. burgess-brown, e. pilka, j. muniz, t. krojer, a. chaikuad, o. gileadi, c. bountra, c. h. arrowsmith, j. weigelt, a. edwards, k. l. kavanagh, u. oppermann, structural genomics consortium (sgc)
Keywords: 3-hydroxyacyl-thioester dehydratase 2, structural genomics, structural genomics consortium, sgc, lyase
- 3ird.pdb.
lyase 22-aug-09 3ird
Cl Na
Title: structure of dihydrodipicolinate synthase from clostridium botulinum
Author: r. c. j. dobson, s. atkinson, m. a. perugini
Keywords: dihydrodipicolinate synthase, amino- acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase, lysine biosynthesis, schiff base
- 3irh.pdb.
hydrolase 24-aug-09 3irh
Ca
Title: structure of an enterococcus faecalis hd-domain protein complexed with dgtp and datp
Author: i. i. vorontsov, g. minasov, l. shuvalova, j. s. brunzelle, a. joachimiak, w. f. anderson, midwest center for structural genomics (mcsg)
Keywords: hd domain, phosphohydrolase, dntpase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3isb.pdb.
transferase/dna 25-aug-09 3isb
Na
Title: binary complex of human dna polymerase beta with a gapped dna
Author: w. a. beard, d. d. shock, v. k. batra, l. c. pedersen, s. h. wilson
Keywords: nucleotidyltransferase, nucleus, polymorphism, sodium, transferase, transferase/dna complex
- 3isc.pdb.
transferase/dna 25-aug-09 3isc
Na
Title: binary complex of human dna polymerase beta with an abasic site (thf) in the gapped dna
Author: w. a. beard, d. d. shock, v. k. batra, l. c. pedersen, s. h. wilson
Keywords: metal- binding, methylation, nucleotidyltransferase, nucleus, polymorphism, sodium, transferase, transferase/dna complex
- 3isd.pdb.
transferase/dna 25-aug-09 3isd
Mn Na
Title: ternary complex of human dna polymerase beta with an abasic site (thf): dapcpp mismatch
Author: w. a. beard, d. d. shock, v. k. batra, l. c. pedersen, s. h. wilson
Keywords: magnesium, metal-binding, methylation, nucleotidyltransferase, nucleus, polymorphism, sodium, transferase, transferase/dna complex
- 3ist.pdb.
isomerase 27-aug-09 3ist
Cl Se
Title: crystal structure of glutamate racemase from listeria monocytogenes in complex with succinic acid
Author: k. a. majorek, m. chruszcz, t. skarina, o. onopriyenko, j. stam, w. f. anderson, a. savchenko, j. m. bujnicki, w. minor, center for structural genomics of infectious diseases (csgid)
Keywords: structural genomics, cell wall biogenesis/degradation, isomerase, peptidoglycan synthesis, center for structural genomics of infectious diseases, csgid, cell shape
- 3isu.pdb.
signaling protein 27-aug-09 3isu
Title: crystal structure of the rgc domain of iqgap3
Author: l. nedyalkova, w. tempel, y. tong, l. crombet, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: structural genomics consortium (sgc), rgc domain, calmodulin-binding, phosphoprotein, polymorphism, signaling protein
- 3isv.pdb.
isomerase 27-aug-09 3isv
Cl Ca Se
Title: crystal structure of glutamate racemase from listeria monocytogenes in complex with acetate ion
Author: k. a. majorek, m. chruszcz, t. skarina, o. onopriyenko, j. stam, w. f. anderson, a. savchenko, j. m. bujnicki, w. minor, center for structural genomics of infectious diseases (csgid)
Keywords: structural genomics, cell wall biogenesis/degradation, isomerase, peptidoglycan synthesis, center for structural genomics of infectious diseases, csgid, cell shape
- 3iu5.pdb.
transcription 30-aug-09 3iu5
Title: crystal structure of the first bromodomain of human poly- bromodomain containing protein 1 (pb1)
Author: p. filippakopoulos, s. picaud, t. keates, e. ugochukwu, f. von delft, c. h. arrowsmith, a. m. edwards, j. weigelt, c. bountra, s. knapp, structural genomics consortium (sgc)
Keywords: dna-binding, nucleus, phosphoprotein, transcription, transcription regulation
- 3iu6.pdb.
transcription 30-aug-09 3iu6
Zn
Title: crystal structure of the sixth bromodomain of human poly- bromodomain containing protein 1 (pb1)
Author: p. filippakopoulos, t. keates, s. picaud, a. c. w. pike, e. ugochukwu, f. von delft, c. h. arrowsmith, a. m. edwards, j. weigelt, c. bountra, s. knapp, structural genomics consortium (sgc)
Keywords: dna-binding, nucleus, phosphoprotein, transcription, transcription regulation
- 3iuc.pdb.
chaperone 31-aug-09 3iuc
Ca
Title: crystal structure of the human 70kda heat shock protein 5 (bip/grp78) atpase domain in complex with adp
Author: m. wisniewska, t. karlberg, c. h. arrowsmith, h. berglund, c. bountra, r. collins, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, a. kallas, t. kotyenova, a. kotzch, p. kraulis, n. markova, m. moche, t. k. nielsen, p. nordlund, t. nyman, c. persson, a. roos, p. schutz, m. i. siponen, l. svensson, a. g. thorsell, l. tresaugues, s. van den berg, e. wahlberg, j. weigelt, m. welin, h. schuler, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc, atp-binding, nucleotide-binding, stress response, chaperone
- 3iuv.pdb.
structural genomics, unknown function 31-aug-09 3iuv
Se
Title: the structure of a member of tetr family (sco1917) from streptomyces coelicolor a3
Author: k. tan, m. cuff, x. xu, h. zheng, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: unknown function
- 3iv3.pdb.
lyase 31-aug-09 3iv3
K Se
Title: the structure of a putative tagatose 1,6-aldolase from streptococcus mutans
Author: m. e. cuff, c. hatzos, r. jedrzejczak, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: lactose metabolism, lyase
- 3iv7.pdb.
oxidoreductase 31-aug-09 3iv7
Se
Title: crystal structure of iron-containing alcohol dehydrogenase (np_602249.1) from corynebacterium glutamicum atcc 13032 kitasato at 2.07 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: iron-containing alcohol dehydrogenase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, oxidoreductase
- 3ivp.pdb.
dna binding protein 01-sep-09 3ivp
Se
Title: the structure of a possible transposon-related dna-binding protein from clostridium difficile 630.
Author: k. tan, n. marshall, r. jedrzejczak, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: transposon-related dna-binding, clostridium difficile 630, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, dna-binding, dna binding protein
- 3ivs.pdb.
transferase 01-sep-09 3ivs
Co Mg Se
Title: homocitrate synthase lys4
Author: s. l. bulfer, e. m. scott, j. -f. couture, l. pillus, r. c. trievel
Keywords: metalloprotein, transferase, claisen condensation, amino-acid biosynthesis, lysine biosynthesis, mitochondrion, transit peptide
- 3ivt.pdb.
transferase 01-sep-09 3ivt
Zn Na
Title: homocitrate synthase lys4 bound to 2-og
Author: s. l. bulfer, e. m. scott, j-f. couture, l. pillus, r. c. trievel
Keywords: metalloprotein, transferase, claisen condensation, amino-acid biosynthesis, lysine biosynthesis, mitochondrion, transit peptide
- 3ivu.pdb.
transferase 01-sep-09 3ivu
Co Na
Title: homocitrate synthase lys4 bound to 2-og
Author: s. l bulfer, e. m. scott, j. -f. couture, l. pillus, r. c. trievel
Keywords: metalloprotein, transferase, claisen condensation, amino-acid biosynthesis, lysine biosynthesis, mitochondrion, transit peptide
- 3iwl.pdb.
metal transport 02-sep-09 3iwl
Pt
Title: crystal structure of cisplatin bound to a human copper chaperone (monomer)
Author: a. k. boal, a. c. rosenzweig
Keywords: transport protein, cisplatin, platinum, chaperone, copper, copper transport, ion transport, metal-binding, transport, metal transport
- 3iwx.pdb.
metal transport 03-sep-09 3iwx
Pt
Title: crystal structure of cisplatin bound to a human copper chaperone (dimer)
Author: a. k. boal, a. c. rosenzweig
Keywords: transport protein, cisplatin, platinum, chaperone, copper, copper transport, ion transport, metal-binding, transport, metal transport
- 3ix6.pdb.
transferase 03-sep-09 3ix6
Title: crystal structure of thymidylate synthase thya from brucella melitensis
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: structural genomics, seattle structural genomics center for infectious disease
- 3ix7.pdb.
structural genomics, unknown function 03-sep-09 3ix7
Se
Title: crystal structure of a domain of functionally unknown protein from thermus thermophilus hb8
Author: c. chang, h. li, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: thermus thermophilus hb8, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 3ixc.pdb.
transferase 03-sep-09 3ixc
Mg
Title: crystal structure of hexapeptide transferase family protein from anaplasma phagocytophilum
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: ssgcid, seattle structural genomics center for infectious disease, gram-negative bacteria, human granulocytic anaplasmosis, beta helix, transferase
- 3jq0.pdb.
sugar binding protein 04-sep-09 3jq0
Cl Se
Title: crystal structure of susd superfamily protein (yp_001299712.1) from bacteroides vulgatus atcc 8482 at 1.13 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: sugar binding protein
- 3jq1.pdb.
sugar binding protein 04-sep-09 3jq1
Cl Ca Se
Title: crystal structure of susd superfamily protein (yp_001297730.1) from bacteroides vulgatus atcc 8482 at 1.55 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: susd superfamily protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, ragb, susd and hypothetical proteins, sugar binding protein
- 3jrk.pdb.
lyase 08-sep-09 3jrk
Se
Title: a putative tagatose 1,6-diphosphate aldolase from streptococcus pyogenes
Author: y. fan, l. volkart, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: streptococcus pyogenes m1 gas, tagatose, 1,6- diphosphate aldolase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, lactose metabolism, lyase
- 3jrt.pdb.
structural genomics, unknown function 08-sep-09 3jrt
Se
Title: structure from the mobile metagenome of v. paracholerae: integron cassette protein vpc_cass2
Author: s. j. harrop, c. deshpande, v. sureshan, y. boucher, x. xu, h. cui, m. cuff, a. edwards, a. savchenko, a. joachimiak, h. w. stokes, p. m. g. curmi, b. c. mabbutt, midwest center for structural genomics (mcsg)
Keywords: vibrio paracholerae, mobile metagenome, structural genomics, psi-2 protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3js3.pdb.
lyase 09-sep-09 3js3
Title: crystal structure of type i 3-dehydroquinate dehydratase (arod) from clostridium difficile with covalent reaction intermediate
Author: g. minasov, s. h. light, l. shuvalova, i. dubrovska, j. winsor, p. scott, w. f. anderson, center for structural genomics of infectious diseases (csgid)
Keywords: arod, covalent reaction intermediate, amino-acid biosynthesis, aromatic amino acid biosynthesis, lyase, schiff base, structural genomics, center for structural genomics of infectious diseases, csgid
- 3js4.pdb.
oxidoreductase 09-sep-09 3js4
Na Fe
Title: crystal structure of iron superoxide dismutase from anaplasma phagocytophilum
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: ssgcid, seattle structural genomics center for infectious disease, gram-negative bacteria, human granulocytic anaplasmosis, fe, metalloenzyme, oxidoreductase
- 3js5.pdb.
hydrolase 09-sep-09 3js5
Na
Title: crystal structure of protein tyrosine phosphatase from entamoeba histolytica with hepes in the active site. high resolution, alternative crystal form with 1 molecule in asymmetric unit
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: ssgcid, seattle structural genomics center for infectious disease, parasitic protozoan, dysentery, phosphotyrosine, phosphatase, hydrolase
- 3js9.pdb.
transferase 09-sep-09 3js9
Title: crystal structure of nucleotide diphosphate kinase family protein from babesia bovis
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: redwater fever, kinase, transferase
- 3jsa.pdb.
oxidoreductase 09-sep-09 3jsa
Se
Title: homoserine dehydrogenase from thermoplasma volcanium complexed with nad
Author: j. osipiuk, b. nocek, r. hendricks, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: apc89447, homoserine, dehydrogenase, nad, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, oxidoreductase
- 3jsj.pdb.
transcription regulator 10-sep-09 3jsj
Mg Se
Title: crystal structure of putative transcriptional regulator (np_821317.1) from streptomyces avermitilis ma-4680 at 2.10 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: bacterial regulatory proteins, tetr family, transcription regulator
- 3jsr.pdb.
structural genomics, unknown function 10-sep-09 3jsr
K Se
Title: x-ray structure of all0216 protein from nostoc sp. pcc 7120 at the resolution 1.8a. northeast structural genomics consortium target nsr236
Author: a. p. kuzin, y. chen, j. seetharaman, m. mao, r. xiao, c. ciccosanti, d. lee, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, nsr236, unknown function
- 3jst.pdb.
lyase 10-sep-09 3jst
Title: crystal structure of transcriptional coactivator/pterin dehydratase from brucella melitensis
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: structural genomics, seattle structural genomics center for infectious disease, ssgcid
- 3jt0.pdb.
structural protein 11-sep-09 3jt0
Se
Title: crystal structure of the c-terminal fragment (426-558) lamin-b1 from homo sapiens, northeast structural genomics consortium target hr5546a
Author: a. kuzin, m. abashidze, j. seetharaman, s. sahdev, r. xiao, c. ciccosanti, r. l. belote, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: intermediate filament, leukodystrophy, lipoprotein, membrane, nucleus, phosphoprotein, polymorphism, prenylation, structural protein
- 3jte.pdb.
protein binding 11-sep-09 3jte
Title: crystal structure of response regulator receiver domain protein from clostridium thermocellum
Author: a. a. fedorov, e. v. fedorov, r. toro, m. j. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: nysgrc, response regulator receiver domain, target 11226e, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, protein binding
- 3jtj.pdb.
transferase 12-sep-09 3jtj
Se
Title: 3-deoxy-manno-octulosonate cytidylyltransferase from yersinia pestis
Author: j. osipiuk, m. zhou, s. grimshaw, w. f. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
Keywords: idp02355, 3-deoxy-manno-octulosonate cytidylyltransferase, cytoplasm, lipopolysaccharide biosynthesis, nucleotidyltransferase, transferase, center for structural genomics of infectious diseases, csgi...
- 3jtk.pdb.
transferase 12-sep-09 3jtk
Br
Title: crystal structure of human type-i n-myristoyltransferase with bound myristoyl-coa and inhibitor ddd90055
Author: w. qiu, a. hutchinson, a. wernimont, y. -h. lin, a. kania, m. ravichandran, i. kozieradzki, d. cossar, m. schapira, c. h. arrowsmith, c. bountra, j. weigelt, a. m. edwards, p. g. wyatt, m. a. j. ferguson, j. a. frearson, s. y. brand, d. a. robinson, a. bochkarev, r. hui, structural genomics consortium (sgc)
Keywords: n-myristoyltransferase, nmt1, acyltransferase, alternative splicing, cytoplasm, phosphoprotein, polymorphism, structural genomics, structural genomics consortium, sgc
- 3jtx.pdb.
transferase 14-sep-09 3jtx
Ca Se
Title: crystal structure of aminotransferase (np_283882.1) from neisseria meningitidis z2491 at 1.91 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: aminotransferase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, transferase
- 3ju1.pdb.
lyase, isomerase 14-sep-09 3ju1
Se
Title: crystal structure of enoyl-coa hydratase/isomerase family protein
Author: y. kim, x. xu, h. cui, j. ng, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, isomerase, lyase
- 3ju2.pdb.
structural genomics, unknown function 14-sep-09 3ju2
Zn
Title: crystal structure of protein smc04130 from sinorhizobium meliloti 1021
Author: y. patskovsky, r. foti, u. ramagopal, v. malashkevich, r. toro, j. freeman, s. miller, j. m. sauder, f. m. raushel, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: psi-2, tim barrel protein, protein structure initiative, zn binding domain, new york sgx research center for structural genomics, nysgxrc, uncharacterized protein, unknown function
- 3ju3.pdb.
oxidoreductase 14-sep-09 3ju3
Se
Title: crystal structure of alpha chain of probable 2-oxoacid ferredoxin oxidoreductase from thermoplasma acidophilum
Author: c. chang, n. marshall, j. bearden, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: probable 2-oxoacid ferredoxin oxidoreductase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 3ju8.pdb.
oxidoreductase 14-sep-09 3ju8
Cl Mg Se
Title: crystal structure of succinylglutamic semialdehyde dehydrogenase from pseudomonas aeruginosa.
Author: y. kim, h. li, k. buck, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, arginine metabolism, nad, oxidoreductase
- 3juw.pdb.
transferase 15-sep-09 3juw
Se
Title: putative gnat-family acetyltransferase from bordetella pertussis.
Author: j. osipiuk, r. wu, g. cobb, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: apc60242, gnat family, acetyltransferase, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, transferase
- 3jvd.pdb.
transcription regulator 16-sep-09 3jvd
Title: crystal structure of putative transcription regulation repressor (laci family) from corynebacterium glutamicum
Author: y. patskovsky, u. ramagopal, r. toro, r. foti, j. freeman, j. do, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: transcription regulator
- 3jvi.pdb.
hydrolase 16-sep-09 3jvi
Title: product state mimic crystal structure of protein tyrosine phosphatase from entamoeba histolytica
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: ssgcid, seattle structural genomics center for infectious disease, parasitic protozoan, dysentery, liver abscess, hydrolase
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