Recent PDB releases or updates: week of 10 July 2009
- 1oz3.pdb.
transcription 07-apr-03 1oz3
Se
Title: crystal structure of 3-mbt repeats of lethal (3) malignant brain tumor (native-i) at 1.85 angstrom
Author: w. k. wang, v. tereshko, p. boccuni, d. macgrogan, s. d. nimer, d. j. patel
Keywords: three malignant brain tumor, transcription
- 1r3g.pdb.
dna 01-oct-03 1r3g
Mg
Title: 1.16a x-ray structure of the synthetic dna fragment with the incorporated 2'-o-[(2-guanidinium)ethyl]-5-methyluridine residues
Author: t. p. prakash, a. puschl, e. lesnik, v. tereshko, m. egli, m. manoharan
- 1s9u.pdb.
structural genomics, unknown function 05-feb-04 1s9u
Se
Title: atomic structure of a putative anaerobic dehydrogenase component
Author: y. qiu, r. zhang, v. tereshko, y. kim, f. collart, a. joachimiak, a. kossiakoff, midwest center for structural genomics (mcsg)
Keywords: anaerobic dehydrogenases component, psi, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 1t3w.pdb.
replication 28-apr-04 1t3w
Se
Title: crystal structure of the e.coli dnag c-terminal domain (residues 434 to 581)
Author: a. j. oakley, k. v. loscha, p. m. schaeffer, e. liepinsh, m. c. j. wilce, g. otting, n. e. dixon
Keywords: dna-directed rna polymerase, e. coli, dna replication
- 1tbx.pdb.
viral protein 20-may-04 1tbx
Se
Title: crystal structure of ssv1 f-93
Author: p. kraft, a. oeckinghaus, d. kummel, g. h. gauss, b. wiedenheft, m. young, c. m. lawrence
Keywords: winged helix, f-93, fusellovirus, viral protein
- 1tex.pdb.
transferase 25-may-04 1tex
Title: mycobacterium smegmatis stf0 sulfotransferase with trehalose
Author: j. d. mougous, c. j. petzold, r. h. senaratne, d. h. lee, d. l. akey, f. l. lin, s. e. munchel, m. r. pratt, l. w. riley, j. a. leary, j. m. berger, c. r. bertozzi
Keywords: sulfotransferase, sulfolipid, sulfation, trehalose, trehalose-2-sulfate
- 1u6b.pdb.
structural protein/rna 29-jul-04 1u6b
Mg K
Title: crystal structure of a self-splicing group i intron with both exons
Author: p. l. adams, m. r. stahley, a. b. kosek, j. wang, s. a. strobel
Keywords: exon, ribozyme, group i, u1a, rna, structural protein/rna complex
- 2a53.pdb.
luminescent protein 30-jun-05 2a53
Cl
Title: fluorescent protein asfp595, a143s, off-state
Author: m. andresen, m. c. wahl, a. c. stiel, f. graeter, l. schaefer, s. trowitzsch, g. weber, c. eggeling, h. grubmueller, s. w. hell, s. jakobs
Keywords: fluorescent protein, chromoprotein, photochromic protein, reversible photoswitch, luminescent protein
- 2a54.pdb.
luminescent protein 30-jun-05 2a54
Cl
Title: fluorescent protein asfp595, a143s, on-state, 1min irradiation
Author: m. andresen, m. c. wahl, a. c. stiel, f. graeter, l. schaefer, s. trowitzsch, g. weber, c. eggeling, h. grubmueller, s. w. hell, s. jakobs
Keywords: fluorescent protein, chromoprotein, photochromic protein, reversible photoswitch, luminescent protein
- 2a8g.pdb.
unknown function 08-jul-05 2a8g
Title: structure of avidin in complex with the ligand deoxyguanosine
Author: r. conners, e. hooley, s. thomas, r. l. brady
Keywords: unknown function
- 2e1m.pdb.
oxidoreductase 26-oct-06 2e1m
Title: crystal structure of l-glutamate oxidase from streptomyces sp. x-119-6
Author: c. sasaki, a. kashima, c. sakaguchi, h. mizuno, j. arima, h. kusakabe, t. tamura, s. sugio, k. inagaki
Keywords: l-glutamate oxidase, fad, l-gox, flavoprotein, 3d-structure, oxidoreductase
- 2gc6.pdb.
ligase 13-mar-06 2gc6
Title: s73a mutant of l. casei fpgs
Author: c. a. smith, j. a. cross, a. l. bognar, x. sun
Keywords: p-loop, site-directed mutant, ligase
- 2gw4.pdb.
luminescent protein 03-may-06 2gw4
Ni
Title: crystal structure of stony coral fluorescent protein kaede, red form
Author: i. hayashi, h. mizuno, a. miyawako, m. ikura
Keywords: luminescent protein
- 2h5o.pdb.
luminescent protein 26-may-06 2h5o
Mg
Title: crystal structure of morange
Author: x. shu, s. j. remington
Keywords: novel 5-membered ring, three-ring-chromophore, luminescent protein
- 2h5p.pdb.
luminescent protein 26-may-06 2h5p
Title: crystal structure of mstrawberry at ph 9.5
Author: x. shu, s. j. remington
Keywords: luminescent protein
- 2h5q.pdb.
luminescent protein 26-may-06 2h5q
Title: crystal structure of mcherry
Author: x. shu, s. j. remington
Keywords: luminescent protein
- 2h5r.pdb.
luminescent protein 26-may-06 2h5r
Title: crystal structure of mstrawberry at ph 10.5
Author: x. shu, s. j. remington
Keywords: luminescent protein
- 2h8q.pdb.
luminescent protein 07-jun-06 2h8q
Title: crystal structure of a redshifted mutant (k83m) of the red fluorescent protein drfp583/dsred
Author: c. a. yarbrough, s. j. remington
Keywords: fluorescent, red shift, gfp, dsred, bioluminescence, luminescent protein
- 2k67.pdb.
dna 04-jul-08 2k67
(solution NMR)
Title: nmr solution structure of modified dna containing imidazole nucleosides at acidic ph
Author: s. johannsen, d. boehme, n. duepre, j. mueller, r. k. o. sigel
Keywords: hairpin, artificial nucleobase, imidazole nucleoside, shifted pka, nmr
- 2k68.pdb.
dna 04-jul-08 2k68
(solution NMR)
Title: nmr solution structure of modified dna containing imidazole nucleosides at neutral ph
Author: s. johannsen, d. boehme, n. duepre, j. mueller, r. k. o. sigel
Keywords: hairpin, artificial nucleobase, imidazole nucleoside, shifted pka, nmr
- 2k69.pdb.
dna 04-jul-08 2k69
(solution NMR)
Title: nmr solution structure of modified dna containing imidazole nucleosides at basic ph
Author: s. johannsen, d. boehme, n. duepre, j. mueller, r. k. o. sigel
Keywords: hairpin, artificial nucleobase, imidazole nucleoside, shifted pka, nmr
- 2k7p.pdb.
structural protein 19-aug-08 2k7p
(solution NMR)
Title: filamin a ig-like domains 16-17
Author: o. k. heikkinen, i. kilpelainen, h. koskela, p. permi, s. heikkinen, j. ylanne
Keywords: ig-like, abp-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein, polymorphism, structural protein
- 2k7q.pdb.
structural protein 19-aug-08 2k7q
(solution NMR)
Title: filamin a ig-like domains 18-19
Author: o. k. heikkinen, i. kilpelainen, h. koskela, p. permi, s. heikkinen, j. ylanne
Keywords: ig-like, abp-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein, polymorphism, structural protein
- 2k8x.pdb.
actin-binding protein 25-sep-08 2k8x
(solution NMR)
Title: glytm1b(1-19)zip: a chimeric peptide model of the n-terminus of a rat short alpha-tropomyosin with the n-terminus encoded by exon 1b in complex with tm9d(252-284), a peptide model containing the c terminus of alpha-tropomyosin encoded by exon 9d
Author: n. j. greenfield, l. kotylanskaya, s. e. hitchcock-degregori
Keywords: n terminus, protein complex, c terminus, tropomodulin binding protein, overlap complex, coiled coil, cytoskeletal regulatory protein, actin-binding protein
- 2kb7.pdb.
membrane protein 21-nov-08 2kb7
(solution NMR; solid-state NMR)
Title: hybrid solution and solid-state nmr structure of monomeric phospholamban in lipid bilayers
Author: n. j. traaseth, l. shi, r. verardi, g. veglia
Keywords: solution nmr, solid-state nmr, pisema, hybrid method, lipid bilayers, topology, membrane protein
- 2kbb.pdb.
structural protein 24-nov-08 2kbb
(solution NMR)
Title: nmr structure of the talin rod domain, 1655-1822
Author: b. t. goult, a. r. gingras, n. bate, d. r. critchley, i. l. barsukov
Keywords: rod, bundle, nmr, integrin, f3, cytoskeleton, autoinhibition, structural protein, cell membrane, cell projection, cytoplasm, membrane, phosphoprotein
- 2kbn.pdb.
structural genomics, unknown function 03-dec-08 2kbn
(solution NMR)
Title: solution nmr structure of the ob domain (residues 67-166) of mm0293 from methanosarcina mazei. northeast structural genomics consortium target mar214a.
Author: t. a. ramelot, k. ding, m. magliqui, m. jiang, c. ciccosanti, r. xiao, j. lui, j. k. everett, g. swapna, t. b. acton, b. rost, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: beta barrel, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 2kbu.pdb.
isomerase 08-dec-08 2kbu
(solution NMR)
Title: nmr solution structure of pin1 ww domain mutant with beta turn mimic at position 12
Author: a. a. fuller, g. bhabha, d. a. case
Keywords: beta turn mimic, cell cycle, isomerase, nucleus, phosphoprotein, rotamase
- 2kcx.pdb.
structural genomics, unknown function 30-dec-08 2kcx
(solution NMR)
Title: solution nmr structure of kazal-1 domain of human follistatin-related protein 3 (fstl-3). northeast structural genomics target hr6186a.
Author: p. rossi, y. chiang, s. anderson, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: northeast structural genomics consortium, nesg, unknown function, nucleotide-binding protein
- 2kdc.pdb.
transferase 06-jan-09 2kdc
(solution NMR)
Title: nmr solution structure of e. coli diacylglycerol kinase (dagk) in dpc micelles
Author: w. d. van horn, h. kim, c. d. ellis, a. hadziselimovic, e. s. sulistijo, m. d. karra, c. tian, f. d. sonnichsen, c. r. sanders
Keywords: solution nmr, kinase, dagk, cell inner membrane, cell membrane, membrane, phospholipid biosynthesis, transferase, transmembrane
- 2keg.pdb.
antimicrobial protein 30-jan-09 2keg
(solution NMR)
Title: nmr structure of plantaricin k in dpc-micelles
Author: p. rogne, m. haugen, g. fimland, j. nissen-meyer, p. kristiansen
Keywords: peptide, antimicrobial protein
- 2keh.pdb.
antimicrobial protein 30-jan-09 2keh
(solution NMR)
Title: plantaricin k in tfe
Author: p. rogne, m. haugen, j. nissen-meyer, p. kristiansen
Keywords: peptide, antimicrobial protein
- 2kei.pdb.
transcription/dna 30-jan-09 2kei
(solution NMR)
Title: refined solution structure of a dimer of lac repressor dna- binding domain complexed to its natural operator o1
Author: j. romanuka, g. folkers, n. biris, e. tishchenko, h. wienk, r. kaptein, r. boelens
Keywords: lac operators, nmr, protein-dna complex, dna- binding, repressor, transcription, transcription regulation, transcription/dna complex
- 2kej.pdb.
transcription/dna 30-jan-09 2kej
(solution NMR)
Title: solution structure of a dimer of lac repressor dna-binding domain complexed to its natural operator o2
Author: j. romanuka, g. folkers, n. biris, e. tishchenko, h. wienk, r. kaptein, r. boelens
Keywords: lac operators, nmr, protein-dna complex, dna- binding, repressor, transcription, transcription regulation, transcription/dna complex
- 2kek.pdb.
transcription/dna 30-jan-09 2kek
(solution NMR)
Title: solution structure of a dimer of lac repressor dna-binding domain complexed to its natural operator o3
Author: j. romanuka, g. folkers, n. biris, e. tishchenko, h. wienk, r. kaptein, r. boelens
Keywords: lac operators, nmr, protein-dna complex, dna- binding, repressor, transcription, transcription regulation, transcription/dna complex
- 2kem.pdb.
hydrolase 30-jan-09 2kem
Zn
(solution NMR)
Title: extended structure of citidine deaminase domain of apobec3g
Author: e. harjes, p. j. gross, k. chen, y. lu, k. shindo, r. nowarski, j. d. gross, m. kotler, r. s. harris, h. matsuo
Keywords: sheet, zinc, nmr, alternative splicing, antiviral defense, cytoplasm, host-virus interaction, hydrolase, metal-binding, nucleus, polymorphism, ubl conjugation
- 2kfx.pdb.
metal binding protein 28-feb-09 2kfx
Cl Ca
(solution NMR)
Title: structure of the n-terminal domain of human cardiac troponin c bound to calcium ion and to the inhibitor w7
Author: r. m. b. hoffman, b. d. sykes
Keywords: striated muscle, cardiac, troponin, w7, cardiotonic drugs, acetylation, calcium, cardiomyopathy, disease mutation, muscle protein, polymorphism, metal binding protein
- 2kgb.pdb.
contractile protein/ca binding protein 07-mar-09 2kgb
Ca
(solution NMR)
Title: nmr solution of the regulatory domain cardiac f77w-troponin c in complex with the cardiac troponin i 144-163 switch peptide
Author: p. mercier, o. julien, m. l. crane, b. d. sykes
Keywords: contractile protein/ca binding protein complex
- 2kgx.pdb.
cell adhesion 23-mar-09 2kgx
(solution NMR)
Title: haddock structure of the talin f3 domain in complex with talin 1655-1822
Author: b. t. goult, a. r. gingras, n. bate, d. r. critchley, i. l. barsukov
Keywords: interdomain, f3, cytoskeleton, cell membrane, cell projection, cytoplasm, membrane, phosphoprotein, cell adhesion
- 2kim.pdb.
transferase 07-may-09 2kim
(solution NMR)
Title: 1.7-mm microcryoprobe solution nmr structure of an o6- methylguanine dna methyltransferase family protein from vibrio parahaemolyticus. northeast structural genomics consortium target vpr247.
Author: j. m. aramini, r. l. belote, c. t. ciccosanti, m. jiang, b. rost, r. nair, g. v. t swapna, t. b. acton, r. xiao, j. k. everett, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: northeast structural genomics consortium
- 2kiw.pdb.
dna binding protein 12-may-09 2kiw
(solution NMR)
Title: solution nmr structure of the domain n-terminal to the integrase domain of sh1003 from staphylococcus haemolyticus. northeast structural genomics consortium target shr105f (64-166).
Author: y. yang, t. a. ramelot, r. l. belote, e. l. foote, h. janjua, r. nair, b. rost, g. swapna, t. b. acton, r. xiao, j. k. everett, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, dna binding protein
- 2kj8.pdb.
dna binding protein 25-may-09 2kj8
(solution NMR)
Title: nmr structure of fragment 87-196 from the putative phage integrase ints of e. coli: northeast structural genomics consortium target er652a, psi-2
Author: j. r. cort, t. a. ramelot, d. wang, c. ciccosanti, h. janjua, r. nair, b. rost, g. swapna, r. xiao, j. k. everett, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: dna binding protein
- 2kj9.pdb.
dna binding protein 25-may-09 2kj9
(solution NMR)
Title: nmr structure of intb phage-integrase-like protein fragment 90-199 from erwinia carotova subsp. atroseptica: northeast structural genomics consortium target ewr217e
Author: j. r. cort, t. a. ramelot, d. wang, c. ciccosanti, h. janjua, r. nair, b. rost, g. swapna, t. b. acton, r. xiao, j. k. everett, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: dna binding protein
- 2kjk.pdb.
structural genomics, unknown function 29-may-09 2kjk
(solution NMR)
Title: solution structure of the second domain of the listeria protein lin2157, northeast structural genomics consortium target lkr136b
Author: x. wang, k. hamilton, r. h. xiao, d. lee, c. h. ciccosanti, r. nair, b. rost, t. b. acton, g. swapna, j. k. everett, g. t. montelione, j. h. prestegard, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 2kjz.pdb.
unknown function 12-jun-09 2kjz
(solution NMR)
Title: solution nmr structure of protein atc0852 from agrobacterium tumefaciens. northeast structural genomics consortium (nesg) target att2.
Author: a. lemak, a. yee, a. gutmanas, c. fares, m. garcia, g. montelione, c. arrowsmith, northeast structural genomics consortium (nesg)
Keywords: dimer, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2kk4.pdb.
structural genomics, unknown function 15-jun-09 2kk4
(solution NMR)
Title: solution nmr structure of protein af2094 from archaeoglobus fulgidus. northeast structural genomics consotium (nesg) target gt2
Author: a. lemak, a. yee, b. wu, m. karra, t. ramelot, c. fares, a. semesi, m. kennedy, g. t. montelione, c. arrowsmith, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 2kkl.pdb.
structural genomics, unknown function 25-jun-09 2kkl
(solution NMR)
Title: solution nmr structure of fha domain of mb1858 from mycobacterium bovis. northeast structural genomics consortium target mbr243c (24-155).
Author: y. yang, t. a. ramelot, d. wang, e. l. foote, m. jiang, r. nair, b. rost, g. swapna, t. b. acton, r. xiao, j. k. everett, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: fha domain, phosphoprotein, structural genomics, psi- 2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 2kkq.pdb.
structural protein 29-jun-09 2kkq
(solution NMR)
Title: solution nmr structure of the ig-like c2-type 2 domain of human myotilin. northeast structural genomics target hr3158.
Author: p. rossi, r. shastry, c. ciccosanti, k. hamilton, r. xiao, t. b. acton, g. v. t. swapna, r. nair, j. k. everett, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: protein structure initiative, northeast structural genomics consortium, nesg, structural protein
- 2ob3.pdb.
hydrolase 18-dec-06 2ob3
Zn
Title: structure of phosphotriesterase mutant h257y/l303t
Author: j. kim, u. a. ramagopal, p. tsai, f. m. raushel, s. c. almo
Keywords: tim barrel, nerve agents, hydrolase
- 2q2o.pdb.
lyase 29-may-07 2q2o
Mg
Title: crystal structure of h183c bacillus subtilis ferrochelatase in complex with deuteroporphyrin ix 2,4-disulfonic acid dihydrochloride
Author: t. karlberg, o. h. thorvaldsen, s. al-karadaghi
Keywords: lyase
- 2qzs.pdb.
transferase 17-aug-07 2qzs
Title: crystal structure of wild-type e.coli gs in complex with adp and glucose(wtgsb)
Author: f. sheng, j. geiger
Keywords: gt-b fold, rossmann fold, closed-form, adp and glucose binding, glycogen biosynthesis, glycosyltransferase
- 2rc6.pdb.
oxidoreductase 19-sep-07 2rc6
Zn
Title: refined structure of fnr from leptospira interrogans bound to nadp+
Author: a. s. nascimento, d. l. catalano-dupuy, e. a. ceccarelli, i. polikarpov
Keywords: oxidoreductase
- 2rqa.pdb.
hydrolase 17-mar-09 2rqa
Zn
(solution NMR)
Title: solution structure of lgp2 ctd
Author: k. takahasi, h. kumeta, n. tsuduki, r. narita, t. shigemoto, r. hirai, m. yoneyama, m. horiuchi, k. ogura, t. fujita, i. fuyuhiko
Keywords: atp-binding, coiled coil, cytoplasm, helicase, hydrolase, immune response, innate immunity, nucleotide-binding, polymorphism, rna-binding
- 2rqb.pdb.
hydrolase 17-mar-09 2rqb
Zn
(solution NMR)
Title: solution structure of mda5 ctd
Author: k. takahasi, h. kumeta, n. tsuduki, r. narita, t. shigemoto, r. hirai, m. yoneyama, m. horiuchi, k. ogura, t. fujita, i. fuyuhiko
Keywords: phosphoprotein, polymorphism, rna-binding
- 2vkl.pdb.
isomerase 20-dec-07 2vkl
Title: x-ray crystal structure of the intracellular chorismate mutase from mycobactrerium tuberculosis in complex with malate
Author: m. okvist, k. roderer, s. sasso, p. kast, u. krengel
Keywords: tuberculosis, intracellular, chorismate mutase, isomerase
- 2vq4.pdb.
hydrolase 11-mar-08 2vq4
Title: carbohydrate-binding of the starch binding domain of rhizopus oryzae glucoamylase in complex with beta- cyclodextrin and maltoheptaose
Author: j. -y. tung, y. -y. liu, y. -j. sun
Keywords: hydrolase, carbohydrate binding, starch binding domain
- 2vvc.pdb.
blood clotting 05-jun-08 2vvc
Cl F Na Ca
Title: aminopyrrolidine factor xa inhibitor
Author: k. groebke-zbinden, d. w. banner, j. m. benz, f. blasco, g. decoret, j. himber, b. kuhn, n. panday, f. ricklin, p. risch, d. schlatter, m. stahl, r. unger, w. haap
Keywords: cleavage on pair of basic residues
- 2vvu.pdb.
blood clotting 11-jun-08 2vvu
Cl F Na Ca
Title: aminopyrrolidine factor xa inhibitor
Author: k. groebke-zbinden, d. w. banner, j. m. benz, f. blasco, g. decoret, j. himber, b. kuhn, n. panday, f. ricklin, p. risch, d. schlatter, m. stahl, r. unger, w. haap
Keywords: cleavage on pair of basic residues
- 2vvv.pdb.
blood clotting 12-jun-08 2vvv
Cl F Na Ca
Title: aminopyrrolidine-related triazole factor xa inhibitor
Author: k. groebke-zbinden, d. w. banner, j. m. benz, f. blasco, g. decoret, j. himber, b. kuhn, n. panday, f. ricklin, p. risch, d. schlatter, m. stahl, r. unger, w. haap
Keywords: cleavage on pair of basic residues
- 2vwl.pdb.
blood clotting 26-jun-08 2vwl
Cl F Na Ca
Title: aminopyrrolidine factor xa inhibitor
Author: k. groebke-zbinden, d. w. banner, j. m. benz, f. blasco, g. decoret, j. himber, b. kuhn, n. panday, f. ricklin, p. risch, d. schlatter, m. stahl, r. unger, w. haap
Keywords: cleavage on pair of basic residues
- 2vwm.pdb.
blood clotting 26-jun-08 2vwm
Cl F Na
Title: aminopyrrolidine factor xa inhibitor
Author: k. groebke-zbinden, d. w. banner, j. m. benz, f. blasco, g. decoret, j. himber, b. kuhn, n. panday, f. ricklin, p. risch, d. schlatter, m. stahl, r. unger, w. haap
Keywords: cleavage on pair of basic residues
- 2vwn.pdb.
blood clotting 26-jun-08 2vwn
Cl F Na Ca
Title: aminopyrrolidine factor xa inhibitor
Author: k. groebke-zbinden, d. w. banner, j. m. benz, f. blasco, g. decoret, j. himber, b. kuhn, n. panday, f. ricklin, p. risch, d. schlatter, m. stahl, r. unger, w. haap
Keywords: cleavage on pair of basic residues
- 2vwo.pdb.
blood clotting 26-jun-08 2vwo
Cl F Na Ca
Title: aminopyrrolidine factor xa inhibitor
Author: k. groebke-zbinden, d. w. banner, j. m. benz, f. blasco, g. decoret, j. himber, b. kuhn, n. panday, f. ricklin, p. risch, d. schlatter, m. stahl, r. unger, w. haap
Keywords: cleavage on pair of basic residues
- 2vxr.pdb.
toxin 08-jul-08 2vxr
Title: crystal structure of the botulinum neurotoxin serotype g binding domain
Author: p. stenmark, j. dupuy, r. c. stevens
Keywords: hydrolase, neurotoxin, ganglioside, protease, receptor, secreted, botulinum, binding domain, metalloprotease
- 2vxt.pdb.
cytokine 10-jul-08 2vxt
Cl Mg
Title: crystal structure of human il-18 complexed to murine reference antibody 125-2h fab
Author: m. a. argiriadi, t. xiang, c. wu, t. ghayur, d. w. borhani
Keywords: il-18, secreted, cytokine, autoimmunity, glycoprotein, th1/th2 cells, immunoglobulin domain, immunoglobulin v region
- 2vxu.pdb.
immune system 10-jul-08 2vxu
Title: crystal structure of murine reference antibody 125-2h fab fragment
Author: m. a. argiriadi, t. xiang, c. wu, t. ghayur, d. w. borhani
Keywords: il-18, autoimmunity, th1/th2 cells, immune system
- 2vxv.pdb.
immune system 10-jul-08 2vxv
Title: crystal structure of human igg abt-325 fab fragment
Author: m. a. argiriadi, t. xiang, c. wu, t. ghayur, d. w. borhani
Keywords: il-18, fab, th1/th2 cells, autoimmunity
- 2w19.pdb.
transferase/isomerase 16-oct-08 2w19
Title: non-covalent complex between dahp synthase and chorismate mutase from mycobacterium tuberculosis
Author: m. okvist, s. sasso, k. roderer, m. gamper, g. codoni, u. krengel, p. kast
Keywords: isomerase, transferase, drug target, enzyme catalysis
- 2w1a.pdb.
transferase/isomerase 16-oct-08 2w1a
Mn
Title: non-covalent complex between dahp synthase and chorismate mutase from mycobacterium tuberculosis with bound tsa
Author: m. okvist, s. sasso, k. roderer, m. gamper, g. codoni, u. krengel, p. kast
Keywords: isomerase, transferase, drug target, enzyme catalysis
- 2w5j.pdb.
hydrolase 10-dec-08 2w5j
Title: structure of the c14-rotor ring of the proton translocating chloroplast atp synthase
Author: m. vollmar, d. schlieper, m. winn, c. buechner, g. groth
Keywords: chloroplast, atp synthase, lipid-binding, cf(0), plastid, membrane, transport, formylation, energy transduction, hydrogen ion transport, ion transport, transmembrane, membrane protein
- 2we0.pdb.
hydrolase 27-mar-09 2we0
Title: ebv dutpase mutant cys4ser
Author: l. freeman, m. buisson, n. tarbouriech, w. p. burmeister
Keywords: monomer, hydrolase, human herpes virus, epstein- barr virus, nucleotide metabolism
- 2we1.pdb.
hydrolase 27-mar-09 2we1
Title: ebv dutpase mutant asp131asn with bound dump
Author: l. freeman, m. buisson, n. tarbouriech, w. p. burmeister
Keywords: epstein-barr virus, nucleotide metabolism, dutpase, monomer, hydrolase, herpes virus
- 2we2.pdb.
hydrolase 27-mar-09 2we2
Title: ebv dutpase double mutant gly78asp-asp131ser with dump
Author: l. freeman, m. buisson, n. tarbouriech, w. p. burmeister
Keywords: monomer, hydrolase, herpes virus, epstein-barr virus, nucleotide metabolism
- 2we3.pdb.
hydrolase 27-mar-09 2we3
Mg
Title: ebv dutpase inactive mutant deleted of motif v
Author: l. freeman, m. buisson, n. tarbouriech, w. p. burmeister
Keywords: monomer, hydrolase, human herpes virus, epstein- barr virus, nucleotide metabolism
- 2wez.pdb.
hydrolase 02-apr-09 2wez
Title: human bace-1 in complex with 1-ethyl-n-((1s,2r)-2-hydroxy-3- (((3-(methyloxy)phenyl)methyl)amino)-1-(phenylmethyl) propyl)-4-(2-oxo-1-pyrrolidinyl)-1h-indole-6-carboxamide
Author: n. charrier, b. clarke, l. cutler, e. demont, c. dingwall, r. dunsdon, j. hawkins, c. howes, j. hubbard, i. hussain, g. maile, r. matico, j. mosley, a. naylor, a. o'brien, s. redshaw, p. rowland, v. soleil, k. j. smith, s. sweitzer, p. theobald, d. vesey, d. s. walter, g. wayne
Keywords: beta-site app cleaving enzyme
- 2wfs.pdb.
viral protein 15-apr-09 2wfs
(electron microscopy)
Title: fitting of influenza virus np structure into the 9-fold symmetryzed cryoem reconstruction of an active rnp particle.
Author: r. coloma, j. m. valpuesta, r. arranz, j. l. carrascosa, j. ortin, j. martin-benito
Keywords: host-virus interaction, viral protein, rna viruses, nucleoprotein, ribonucleoprotein, rna, virion, nucleus, influenza, rna-binding
- 2wjs.pdb.
cell adhesion 28-may-09 2wjs
Ca
Title: crystal structure of the lg1-3 region of the laminin alpha2 chain
Author: f. carafoli, n. j. clout, e. hohenester
Keywords: secreted, coiled coil, glycoprotein, laminin egf-like domain, extracellular matrix, laminin g-like domain, cell adhesion, disulfide bond, basement membrane
- 2wjv.pdb.
hydrolase 01-jun-09 2wjv
Zn
Title: crystal structure of the complex between human nonsense mediated decay factors upf1 and upf2
Author: m. clerici, a. mourao, i. gutsche, n. h. gehring, m. w. hentze, a. kulozik, j. kadlec, m. sattler, s. cusack
Keywords: polymorphism, metal-binding, phosphoprotein
- 2wjy.pdb.
hydrolase 01-jun-09 2wjy
Zn
Title: crystal structure of the complex between human nonsense mediated decay factors upf1 and upf2 orthorhombic form
Author: m. clerici, a. mourao, i. gutsche, n. h. gehring, m. w. hentze, a. kulozik, j. kadlec, m. sattler, s. cusack
Keywords: nonsense mediated decay, zinc-finger, atp-binding, polymorphism, metal-binding, upf2, zinc, upf1, helicase, hydrolase, cytoplasm, nonsense-mediated mrna decay, phosphoprotein, nucleotide-binding
- 2wk5.pdb.
transferase 05-jun-09 2wk5
Title: structural features of native human thymidine phosphorylase and in complex with 5-iodouracil
Author: e. mitsiki, a. c. papageorgiou, s. iyer, n. thiyagarajan, s. h. prior, d. sleep, c. finnis, k. r. acharya
Keywords: developmental protein, angiogenesis, 5-iodouracil, growth factor, enzyme kinetics, differentiation, disease mutation, thymidine phosphorylase, chemotaxis, transferase, mutagenesis, polymorphism
- 2wk6.pdb.
transferase 05-jun-09 2wk6
I
Title: structural features of native human thymidine phosphorylase and in complex with 5-iodouracil
Author: e. mitsiki, a. c. papageorgiou, s. iyer, n. thiyagarajan, s. h. prior, d. sleep, c. finnis, k. r. acharya
Keywords: developmental protein, angiogenesis, 5-iodouracil, growth factor, enzyme kinetics, differentiation, disease mutation, thymidine phosphorylase, chemotaxis, transferase, mutagenesis, polymorphism
- 2wlc.pdb.
transferase 23-jun-09 2wlc
Title: crystallographic analysis of the polysialic acid o- acetyltransferase oatwy
Author: h. j. lee, b. rakic, m. gilbert, w. w. wakarchuk, s. g. withers, n. c. j. strynadka
Keywords: enzyme, acetyltransferase, left-handed beta helix
- 2wld.pdb.
transferase 23-jun-09 2wld
Title: crystallographic analysis of the polysialic acid o- acetyltransferase oatwy
Author: h. j. lee, b. rakic, m. gilbert, w. w. wakarchuk, s. g. withers, n. c. j. strynadka
Keywords: enzyme, acetyltransferase, left-handed beta helix
- 2wle.pdb.
transferase 23-jun-09 2wle
Title: crystallographic analysis of the polysialic acid o- acetyltransferase oatwy
Author: h. j. lee, b. rakic, m. gilbert, w. w. wakarchuk, s. g. withers, n. c. j. strynadka
Keywords: enzyme, acetyltransferase, left-handed beta helix
- 2wlf.pdb.
transferase 23-jun-09 2wlf
Title: crystallographic analysis of the polysialic acid o- acetyltransferase oatwy
Author: h. j. lee, b. rakic, m. gilbert, w. w. wakarchuk, s. g. withers, n. c. j. strynadka
Keywords: enzyme, acetyltransferase, left-handed beta helix
- 2wlg.pdb.
transferase 23-jun-09 2wlg
Title: crystallographic analysis of the polysialic acid o- acetyltransferase oatwy
Author: h. j. lee, b. rakic, m. gilbert, w. w. wakarchuk, s. g. withers, n. c. j. strynadka
Keywords: enzyme, acetyltransferase, left-handed beta helix
- 2zgc.pdb.
hydrolase 21-jan-08 2zgc
Title: crystal structure of active human granzyme m
Author: l. f. wu, l. wang, g. q. hua, k. liu, y. j. zhai, f. sun, z. s. fan
Keywords: cytolysis, glycoprotein, hydrolase, secreted, zymogen
- 2zgh.pdb.
hydrolase 22-jan-08 2zgh
Title: crystal structure of active granzyme m bound to its product
Author: l. f. wu, l. wang, g. q. hua, k. liu, y. j. zhai, f. sun, z. s. fan
Keywords: synthesized peptide, cytolysis, glycoprotein, hydrolase, protease, secreted, zymogen
- 2zgj.pdb.
hydrolase 22-jan-08 2zgj
Title: crystal structure of d86n-gzmm complexed with its optimal synthesized substrate
Author: l. f. wu, l. wang, g. q. hua, k. liu, y. j. zhai, f. sun, z. s. fan
Keywords: synthesized peptide, cytolysis, glycoprotein, hydrolase, secreted, zymogen
- 2zks.pdb.
hydrolase 28-mar-08 2zks
Title: structural insights into the proteolytic machinery of apoptosis-inducing granzyme m
Author: l. f. wu, l. wang, g. q. hua, k. liu, x. yang, y. j. zhai, f. sun, z. s. fan
Keywords: granzyme, cytolysis, glycoprotein, hydrolase, secreted, zymogen
- 2ztt.pdb.
transferase 08-oct-08 2ztt
Se
Title: crystal structure of rna polymerase pb1-pb2 subunits from influenza a virus
Author: k. sugiyama, e. obayashi, s. -y. park
Keywords: virion
- 3a1g.pdb.
transferase 02-apr-09 3a1g
Se
Title: high-resolution crystal structure of rna polymerase pb1-pb2 subunits from influenza a virus
Author: k. sugiyama, s. -y. park, e. obayashi
Keywords: rna polymerase, crystal structure, nucleotide-binding, nucleotidyltransferase, nucleus, rna replication, rna-directed rna polymerase, transferase, mitochondrion, mrna capping, mrna processing, virion
- 3b6b.pdb.
transferase 28-oct-07 3b6b
Mg
Title: crystal structure of acanthamoeba polyphaga mimivirus nucleoside diphosphate kinase complexed with dgdp
Author: s. jeudy, a. lartigue, j. m. claverie, c. abergel
Keywords: phosphotransferase, nucleotide binding protein, atp- binding, kinase, magnesium, metal-binding, nucleotide metabolism, nucleotide-binding, phosphorylation
- 3c0r.pdb.
cell cycle, hydrolase 21-jan-08 3c0r
Se
Title: structure of ovarian tumor (otu) domain in complex with ubiquitin
Author: t. e. messick, r. marmorstein
Keywords: deubiquitinase, cell cycle, hydrolase
- 3c86.pdb.
hydrolase 10-feb-08 3c86
Co Fe
Title: opda from agrobacterium radiobacter with bound product diethyl thiophosphate from crystal soaking with tetraethyl dithiopyrophosphate- 1.8 a
Author: d. l. ollis, c. j. jackson, j. l. foo, h. k. kim, p. d. carr, j. w. liu, g. salem
Keywords: opda, metalloenzyme, hydrolase
- 3cak.pdb.
hydrolase 20-feb-08 3cak
Co
Title: x-ray structure of wt pte with ethyl phosphate
Author: j. kim, p. -c. tsai, s. c. almo, f. m. raushel
Keywords: hydrolase, membrane, metal-binding, plasmid
- 3cop.pdb.
transferase 28-mar-08 3cop
Title: crystal structure of e.coli gs mutant e377a in complex with adp and acceptor analogue heppso
Author: f. sheng, j. h. geiger
Keywords: gt-b fold, rossmann fold, closed-form, adp, acceptor analogue heppso binding, glycogen biosynthesis, glycosyltransferase
- 3cs2.pdb.
hydrolase, metal binding protein 08-apr-08 3cs2
Co As
Title: crystal structure of pte g60a mutant
Author: j. kim, s. c. almo
Keywords: tim barrel, nerve agents, hydrolase, membrane, metal-binding, plasmid, zinc, metal binding protein
- 3d1j.pdb.
transferase 06-may-08 3d1j
Title: crystal structure of e.coli gs mutant dmgs(c7s;c408s)
Author: f. sheng, j. h. geiger
Keywords: gt-b fold, rossmann fold, open form, glycogen biosynthesis, glycosyltransferase
- 3d8w.pdb.
lyase 26-may-08 3d8w
Zn
Title: use of a carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti- cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: anti-cancer, benzolamide, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3d9z.pdb.
lyase 28-may-08 3d9z
Cl Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3daz.pdb.
lyase 30-may-08 3daz
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dbk.pdb.
hydrolase 01-jun-08 3dbk
Zn Ca
Title: pseudomonas aeruginosa elastase with phosphoramidon
Author: d. b. mckay, m. t. overgaard
Keywords: enzyme, phosphoramidon, protease inhibitor complex, calcium, hydrolase, metal-binding, metalloprotease, protease, secreted, zinc, zymogen
- 3dbu.pdb.
lyase 02-jun-08 3dbu
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dc3.pdb.
lyase 03-jun-08 3dc3
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dc9.pdb.
lyase 03-jun-08 3dc9
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dcc.pdb.
lyase 03-jun-08 3dcc
Cl Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dcs.pdb.
lyase 04-jun-08 3dcs
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dcw.pdb.
lyase 04-jun-08 3dcw
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dd0.pdb.
lyase 04-jun-08 3dd0
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dge.pdb.
transferase/signaling protein 13-jun-08 3dge
Title: structure of a histidine kinase-response regulator complex reveals insights into two-component signaling and a novel cis-autophosphorylation mechanism
Author: p. casino, a. marina
Keywords: atp binding domain, receiver domain, kinase, phosphoprotein, transferase, transferase/signaling protein complex
- 3dgf.pdb.
signaling protein 13-jun-08 3dgf
Title: structure of a histidine kinase-response regulator complex reveals insights into two-component signaling and a novel cis-autophosphorylation mechanism
Author: p. casino, a. marina
Keywords: signaling protein
- 3dkc.pdb.
oncoprotein 24-jun-08 3dkc
Cl Mg
Title: sgx clone 5698a65kfg1h1
Author: j. hendle
Keywords: c-met kinase, fragment based, membrane, receptor, transmembrane, oncoprotein
- 3dkf.pdb.
oncoprotein 24-jun-08 3dkf
Cl
Title: sgx clone 5698a65kfg1h1
Author: j. hendle
Keywords: c-met kinase, fragment based, membrane, receptor, transmembrane, oncoprotein
- 3dkg.pdb.
oncoprotein 24-jun-08 3dkg
Cl
Title: sgx clone 5698a109kfg1h1
Author: j. hendle
Keywords: c-met kinase, fragment based, membrane, receptor, transmembrane, oncoprotein
- 3dkh.pdb.
oxidoreductase 25-jun-08 3dkh
Cl Cu
Title: l559a mutant of melanocarpus albomyces laccase
Author: n. hakulinen, j. rouvinen
Keywords: multicopper oxidase, c-terminal mutant, ascomycete, glycoprotein, lignin degradation, metal-binding, copper, oxidoreductase
- 3dlw.pdb.
hydrolase inhibitor 29-jun-08 3dlw
Title: antichymotrypsin
Author: s. c. feil
Keywords: partial insertion, loop, acute phase, alternative splicing, disease mutation, glycoprotein, polymorphism, protease inhibitor, secreted, serine protease inhibitor, hydrolase inhibitor
- 3dnz.pdb.
hydrolase 03-jul-08 3dnz
Zn Ca
Title: thermolysin by lb nanotemplate method before high x-ray dose on esrf id14-2 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen
- 3do0.pdb.
hydrolase 03-jul-08 3do0
Zn Ca
Title: thermolysin by classical hanging drop method after high x- ray dose on esrf id14-2 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen
- 3do1.pdb.
hydrolase 03-jul-08 3do1
Zn Ca
Title: thermolysin by classical hanging drop method before high x- ray dose on esrf id14-2 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen
- 3do2.pdb.
hydrolase 03-jul-08 3do2
Zn Ca
Title: thermolysin by lb nanotemplate method after high x-ray dose on esrf id14-2 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen
- 3doj.pdb.
oxidoreductase 04-jul-08 3doj
Cl
Title: structure of glyoxylate reductase 1 from arabidopsis (atglyr1)
Author: r. jorgensen
Keywords: 4-hydroxybutyrate dehydrogenase, succinic semialdehyde reductase, oxidoreductase
- 3dvq.pdb.
hydrolase 20-jul-08 3dvq
Ca
Title: proteinase k by lb nanotemplate method before high x-ray dose on esrf id14-2 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: calcium, hydrolase, metal-binding, protease, serine protease, zymogen
- 3dvr.pdb.
hydrolase 20-jul-08 3dvr
Ca
Title: proteinase k by lb nanotemplate method after the first step of high x-ray dose on esrf id14-2 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: calcium, hydrolase, metal-binding, protease, serine protease, zymogen
- 3dvs.pdb.
hydrolase 20-jul-08 3dvs
Ca
Title: proteinase k by lb nanotmplate method after the second step of high dose on esrf id14-2 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: calcium, hydrolase, metal-binding, protease, serine protease, zymogen
- 3dw1.pdb.
hydrolase 21-jul-08 3dw1
Ca
Title: proteinase k by lb nanotemplate method after the third step high x-ray dose on esrf id14-2 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: calcium, hydrolase, metal-binding, protease, serine protease, zymogen
- 3dw3.pdb.
hydrolase 21-jul-08 3dw3
Ca
Title: proteinase k by classical hanging drop method before high x ray dose on esrf id 14-2 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: calcium, hydrolase, metal-binding, protease, serine protease, zymogen
- 3dwe.pdb.
hydrolase 22-jul-08 3dwe
Ca
Title: proteinase k by classical hanging drop method after high x- ray dose on esrf id14-2 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: hydrolase, calcium, metal-binding, protease, serine protease, zymogen
- 3dx0.pdb.
hydrolase 23-jul-08 3dx0
Zn
Title: golgi alpha-mannosidase ii in complex with mannostatin a at ph 5.75
Author: d. a. kuntz, d. r. rose
Keywords: glycosidase, golgi apparatus, hydrolase, membrane, metal-binding, signal-anchor, transmembrane, zinc
- 3dx1.pdb.
hydrolase 23-jul-08 3dx1
Zn
Title: golgi alpha-mannosidase ii in complex with mannostatin analog (1s,2s,3r,4r)-4-aminocyclopentane-1,2,3-triol
Author: d. a. kuntz, d. r. rose
Keywords: glycosidase, golgi apparatus, hydrolase, membrane, metal-binding, signal-anchor, transmembrane, zinc
- 3dx2.pdb.
hydrolase 23-jul-08 3dx2
Zn
Title: golgi mannosidase ii complex with mannostatin b
Author: d. a. kuntz, w. zhong, j. guo, d. r. rose, g. -j. boons
Keywords: glycosidase, golgi apparatus, hydrolase, membrane, metal-binding, signal-anchor, transmembrane, zinc
- 3dx3.pdb.
hydrolase 23-jul-08 3dx3
Zn
Title: golgi alpha-mannosidase ii in complex with mannostatin analog (1r,2r,3s,4r,5r)-5-aminocyclopentane-1,2,3,4-tetraol
Author: d. a. kuntz, d. r. rose
Keywords: glycosidase, golgi apparatus, hydrolase, membrane, metal-binding, signal-anchor, transmembrane, zinc
- 3dx4.pdb.
hydrolase 23-jul-08 3dx4
Zn
Title: golgi alpha-mannosidase ii in complex with mannostatin analog (1r,2r,3r,4s,5r)-4-amino-5-methoxycyclopentane-1,2, 3-triol
Author: d. a. kuntz, d. r. rose
Keywords: glycosidase, golgi apparatus, hydrolase, membrane, metal-binding, signal-anchor, transmembrane, zinc
- 3dzn.pdb.
plant protein 30-jul-08 3dzn
Title: thaumatin by lb nanotemplate method before high x-ray dose on esrf id29 beamline
Author: s. tripathi, e. pechkova, c. nicolini
- 3dzp.pdb.
plant protein 30-jul-08 3dzp
Title: thaumatin by lb nanotemplate method after high x-ray dose on esrf id29 beamline
Author: s. tripathi, e. pechkova, c. nicolini
- 3dzr.pdb.
plant protein 30-jul-08 3dzr
Title: thaumatin by classical hanging drop method before high x-ray dose on esrf id29 beamline
Author: s. tripathi, e. pechkova, c. nicolini
- 3e0a.pdb.
plant protein 31-jul-08 3e0a
Title: thaumatin by classical hanging drop method after high x-ray dose on esrf id29 beamline
Author: s. tripathi, e. pechkova, c. nicolini
- 3e6z.pdb.
metal binding protein 17-aug-08 3e6z
Cu
Title: 1.0 a structure of cusf-w44a-cu(ii) residues 10-88 from escherichia coli
Author: i. r. loftin
Keywords: beta-barrel, ob-fold, metalloprotein, metal resistance, copper chaperone, metal-binding, periplasm, metal binding protein
- 3e8u.pdb.
immune system 20-aug-08 3e8u
Title: crystal structure and thermodynamic analysis of diagnostic fab 106.3 complexed with bnp 5-13 (c10a) reveal basis of selective molecular recognition
Author: k. l. longenecker, q. ruan, e. h. fry, s. s. saldana, s. e. brophy, p. l. richardson, s. y. tetin
Keywords: igg1, brain natriuretic peptide (bnp), immune system
- 3eax.pdb.
hydrolase 26-aug-08 3eax
Title: crystal structure ptp1b complex with small molecule compound lzp-6
Author: z. -y. zhang, s. liu, l. -f. zhang, x. yu, t. xue, a. m. gunawan, y. -q. long
Keywords: ptp1b, inhibitor, crystal structure, acetylation, endoplasmic reticulum, hydrolase, membrane, oxidation, phosphoprotein, polymorphism, protein phosphatase
- 3eb1.pdb.
hydrolase 26-aug-08 3eb1
Title: crystal structure ptp1b complex with small molecule inhibitor lzp-25
Author: s. liu, l. -f. zheng, l. wu, x. yu, t. xue, a. m. gunawan, y. -q. long, z. -y zhang
Keywords: ptp1b, inhibitor, crystal structure, acetylation, endoplasmic reticulum, hydrolase, membrane, oxidation, phosphoprotein, polymorphism, protein phosphatase
- 3edx.pdb.
hydrolase 03-sep-08 3edx
Title: crystal structure of the w215a/e217a mutant of murine thrombin
Author: p. s. gandhi, m. j. page, z. chen, l. bush-pelc, e. di cera
Keywords: acute phase, blood coagulation, calcium, cleavage on pair of basic residues, gamma-carboxyglutamic acid, glycoprotein, hydrolase, kringle, protease, zymogen
- 3ee0.pdb.
hydrolase 03-sep-08 3ee0
Title: crystal structure of the w215a/e217a mutant of human thrombin (space group p2(1)2(1)2(1))
Author: p. s. gandhi, m. j. page, z. chen, l. bush-pelc, e. di cera
Keywords: secreted, zymogen
- 3esk.pdb.
chaperone 06-oct-08 3esk
Ni
Title: structure of hop tpr2a domain in complex with the non- cognate hsc70 peptide ligand
Author: t. kajander, l. regan
Keywords: hsp90, hsc70, tetratricopeptide repeat, cytoplasm, nucleus, tpr repeat, chaperone, stress response
- 3esn.pdb.
hormone 06-oct-08 3esn
Br
Title: human transthyretin (ttr) complexed with n-(3,5-dibromo-4- hydroxyphenyl)-2,6-dimethylbenzamide
Author: s. connelly, i. a. wilson
Keywords: growth factor, amyloid, disease mutation, gamma- carboxyglutamic acid, glycoprotein, polymorphism, polyneuropathy, retinol-binding, secreted, thyroid hormone, transport, vitamin a
- 3eso.pdb.
hormone 06-oct-08 3eso
Cl Br
Title: human transthyretin (ttr) complexed with n-(3,5-dibromo-4- hydroxyphenyl)-2,5-dichlorobenzamide
Author: s. connelly, i. a. wilson
Keywords: growth factor, amyloid, disease mutation, gamma- carboxyglutamic acid, glycoprotein, polymorphism, polyneuropathy, retinol-binding, secreted, thyroid hormone, transport, vitamin a
- 3esp.pdb.
hormone 06-oct-08 3esp
Br
Title: human transthyretin (ttr) complexed with n-(3,5-dibromo-4- hydroxyphenyl)-3,5-dimethyl-4-hydroxybenzamide
Author: s. connelly, i. a. wilson
Keywords: growth factor, amyloid, disease mutation, gamma- carboxyglutamic acid, glycoprotein, polymorphism, polyneuropathy, retinol-binding, secreted, thyroid hormone, transport, vitamin a
- 3etc.pdb.
ligase 07-oct-08 3etc
Mg
Title: 2.1 a structure of acyl-adenylate synthetase from methanosarcina acetivorans containing a link between lys256 and cys298
Author: m. b. shah, a. m. gulick, k. s. smith, c. ingram-smith
- 3etl.pdb.
dna binding protein, recombination 08-oct-08 3etl
Mg
Title: rada recombinase from methanococcus maripaludis in complex with amppnp
Author: y. li, y. he, y. luo
Keywords: strand exchange protein, atpase, recombinase, atp analogue, atp-binding, dna damage, dna recombination, dna- binding, nucleotide-binding, dna binding protein, recombination
- 3eu5.pdb.
transferase 09-oct-08 3eu5
Zn
Title: crystal structure of ftase(alpha-subunit; beta-subunit delta c10) in complex with biotingpp
Author: z. guo, u. t. t. nguyen, c. delon, r. s. bon, w. blankenfeldt, r. s. goody, h. waldmann, d. wolters, k. alexandrov
Keywords: prenylome analysis, prenyltransferase, transferase, metal-binding, phosphoprotein, zinc
- 3euv.pdb.
transferase 11-oct-08 3euv
Zn
Title: crystal structure of ftase(alpha-subunit; beta-subunit delta c10, w102t, y154t) in complex with biotingpp
Author: z. guo, u. t. t. nguyen, c. delon, r. s. bon, w. blankenfeldt, r. s. goody, h. waldmann, d. wolters, k. alexandrov
Keywords: prenylome analysis, prenyltransferase, transferase, metal-binding, phosphoprotein, zinc
- 3ew0.pdb.
metal binding protein 13-oct-08 3ew0
Fe
Title: the novel 2fe-2s outer mitochondrial protein mitoneet displays conformational flexibility in its n-terminal cytoplasmic tethering domain
Author: a. r. conlan, m. l. paddock, s. wiley, h. l. axelrod, a. e. cohen, e. c. abresch, melinda roy, r. nechushtai, p. a. jennings
Keywords: metal binding protein
- 3ew9.pdb.
dna binding protein, recombination 14-oct-08 3ew9
Mg K
Title: rada recombinase from methanococcus maripaludis in complex with amppnp and potassium ions
Author: y. li, y. he, y. luo
Keywords: strand exchange protein, atpase, recombinase, atp analogue, atp-binding, dna damage, dna recombination, dna- binding, nucleotide-binding, dna binding protein, recombination
- 3ewa.pdb.
dna binding protein, recombination 14-oct-08 3ewa
Mg
Title: rada recombinase from methanococcus maripaludis in complex with amppnp and ammonium ions
Author: y. li, y. he, y. luo
Keywords: strand exchange protein, atpase, recombinase, atp analogue, atp-binding, dna damage, dna recombination, dna- binding, nucleotide-binding, dna binding protein, recombination
- 3ezl.pdb.
oxidoreductase 23-oct-08 3ezl
Title: crystal structure of acetyacetyl-coa reductase from burkholderia pseudomallei 1710b
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: acetyacetyl-coa reductase, burkholderia pseudomallei, oxidoreductase, structural genomics, seattle structural genomics center for infectious disease
- 3f45.pdb.
calcium binding protein 31-oct-08 3f45
Ca
Title: structure of the r75a mutant of rat alpha-parvalbumin
Author: f. hoh, a. padilla
Keywords: ef-hand, acetylation, calcium, muscle protein, phosphoprotein
- 3f7t.pdb.
oxidoreductase 10-nov-08 3f7t
Fe
Title: structure of active isph shows a novel fold with a [3fe-4s] cluster in the catalytic centre
Author: t. graewert, j. eppinger, f. rohdich, a. bacher, w. eisenreich, m. groll
Keywords: 3fe-4s, iron, iron-sulfur, isoprene biosynthesis, metal-binding, nadp, oxidoreductase, protein binding
- 3fc3.pdb.
hydrolase/dna 21-nov-08 3fc3
Zn Na
Title: crystal structure of the beta-beta-alpha-me type ii restriction endonuclease hpy99i
Author: m. sokolowska, h. czapinska, m. bochtler
Keywords: restriction enzyme, hpy99i, pseudopalindrome, hydrolase/dna complex
- 3fe1.pdb.
chaperone 27-nov-08 3fe1
Cl Mg
Title: crystal structure of the human 70kda heat shock protein 6 (hsp70b') atpase domain in complex with adp and inorganic phosphate
Author: m. wisniewska, l. lehtio, c. h. arrowsmith, h. berglund, c. bountra, r. collins, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, t. karlberg, t. kotenyova, m. moche, m. e. nilsson, p. nordlund, t. nyman, c. persson, j. sagemark, m. i. siponen, a. g. thorsell, l. tresaugues, s. van den berg, j. weigelt, m. welin, m. wikstrom, h. schueler, structural genomics consortium (sgc)
Keywords: atp-binding, nucleotide-binding, polymorphism, stress response, chaperone, structural genomics, structural genomics consortium, sgc
- 3ffq.pdb.
metal transport 04-dec-08 3ffq
Br
Title: hcn2i 443-640 apo-state
Author: n. b. olivier
Keywords: phosphoprotein, potassium transport, sodium, sodium transport, transport, metal transport
- 3fg7.pdb.
structural protein 05-dec-08 3fg7
Title: the crystal structure of villin domain 6
Author: h. wang, l. d. burtnick, r. c. robinson
Keywords: villin head piece, villin, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein
- 3fhs.pdb.
transferase 10-dec-08 3fhs
Title: glutathione transferase from glycine max at 2.7 resolution
Author: i. axarli, d. prathusha, a. c. papageorgiou, n. e. labrou
Keywords: tau class gst, transferase
- 3fl8.pdb.
oxidoreductase 18-dec-08 3fl8
Ca
Title: crystal structure of b. anthracis dihydrofolate reductase (dhfr) with rab1, a tmp-dihydrophthalazine derivative
Author: c. r. bourne, w. w. barrow
Keywords: pyrimidine, dihydrophthalazine
- 3fl9.pdb.
oxidoreductase 18-dec-08 3fl9
Ca
Title: crystal structure of b. anthracis dihydrofolate reductase (dhfr) with trimethoprim
Author: c. r. bourne, w. w. barrow
Keywords: pyrimidine, dihydrophthalazine
- 3fqk.pdb.
transferase 07-jan-09 3fqk
F
Title: hepatitis c virus polymerase ns5b (bk 1-570) with hcv-796 inhibitor
Author: s. f. harris, a. wong
Keywords: hepatitis, ns5b, transferase, rna-dependent rna polymerase, hcv-796
- 3fql.pdb.
transferase 07-jan-09 3fql
F
Title: hepatitis c virus polymerase ns5b (con1 1-570) with hcv-796 inhibitor
Author: s. f. harris, a. wong
Keywords: hepatitis, ns5b, transferase, rna-dependent rna polymerase, hcv-796
- 3fsi.pdb.
transferase/dna 09-jan-09 3fsi
Title: crystal structure of a trypanocidal 4,4'- bis(imidazolinylamino)diphenylamine bound to dna
Author: l. s. glass, m. m. georgiadis, k. d. goodwin
Keywords: protein-dna complex, drug-dna complex, cd27, antitrypanosomal, dna integration, dna recombination, nucleotidyltransferase, transferase
- 3g36.pdb.
nuclear protein 02-feb-09 3g36
Se
Title: crystal structure of the human dpy-30-like c-terminal domain
Author: x. wang, z. lou, m. bartlam, z. rao
Keywords: nucleus, nuclear protein
- 3g7v.pdb.
sugar binding protein, hormone 10-feb-09 3g7v
Title: islet amyloid polypeptide (iapp or amylin) fused to maltose binding protein
Author: j. j. w. wiltzius, m. r. sawaya, d. eisenberg
Keywords: periplasm, sugar transport, transport, amidation, amyloid, cleavage on pair of basic residues, hormone, polymorphism, secreted, sugar binding protein
- 3g7w.pdb.
sugar binding protein, hormone 11-feb-09 3g7w
Title: islet amyloid polypeptide (iapp or amylin) residues 1 to 22 fused to maltose binding protein
Author: j. j. w. wiltzius, m. r. sawaya, d. eisenberg
Keywords: periplasm, sugar transport, transport, amidation, amyloid, cleavage on pair of basic residues, hormone, polymorphism, secreted, sugar binding protein
- 3gah.pdb.
transferase 17-feb-09 3gah
Co Mg K
Title: structure of a f112h variant pduo-type atp:corrinoid adenosyltransferase from lactobacillus reuteri complexed with cobalamin and atp
Author: m. st maurice, p. e. mera, j. c. escalante-semerena, i. rayment
- 3gai.pdb.
transferase 17-feb-09 3gai
Cl Co Mg K
Title: structure of a f112a variant pduo-type atp:corrinoid adenosyltransferase from lactobacillus reuteri complexed with cobalamin and atp
Author: m. st maurice, p. e. mera, j. c. escalante-semerena, i. rayment
- 3gaj.pdb.
transferase 17-feb-09 3gaj
Co Mg K
Title: structure of a c-terminal deletion variant of a pduo-type atp:corrinoid adenosyltransferase from lactobacillus reuteri complexed with cobalamin and atp
Author: m. st maurice, p. e. mera, j. c. escalante-semerena, i. rayment
- 3gd2.pdb.
transcription/transcrition activator 23-feb-09 3gd2
Cl
Title: isoxazole ligand bound to farnesoid x receptor (fxr)
Author: k. p. madauss, s. p. williams, d. n. deaton, g. b. wisely, r. b. mcfadyen
Keywords: transcription/transcrition activator complex
- 3gdq.pdb.
chaperone 24-feb-09 3gdq
Mn
Title: crystal structure of the human 70kda heat shock protein 1- like atpase domain in complex with adp and inorganic phosphate
Author: m. wisniewska, m. moche, c. h. arrowsmith, h. berglund, c. bountra, r. collins, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, t. karlberg, t. kotenyova, l. lehtio, m. e. nilsson, p. nordlund, t. nyman, c. persson, j. sagemark, p. schutz, m. siponen, a. g. thorsell, l. tresaugues, s. van den berg, j. weigelt, m. welin, h. schueler, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc, atp-binding, nucleotide-binding, polymorphism, transcription, chaperone
- 3gh4.pdb.
hydrolase 03-mar-09 3gh4
Title: crystal structure of beta-hexosaminidase from paenibacillus sp. ts12
Author: t. sumida, r. ishii, t. yanagisawa, s. yokoyama, m. ito, riken structural genomics/proteomics initiative (rsgi)
Keywords: riken structural genomics/proteomics initiative, rsgi
- 3gh5.pdb.
hydrolase 03-mar-09 3gh5
Title: crystal structure of beta-hexosaminidase from paenibacillus sp. ts12 in complex with glcnac
Author: t. sumida, r. ishii, t. yanagisawa, s. yokoyama, m. ito, riken structural genomics/proteomics initiative (rsgi)
Keywords: rsgi
- 3gh7.pdb.
hydrolase 03-mar-09 3gh7
Title: crystal structure of beta-hexosaminidase from paenibacillus sp. ts12 in complex with galnac
Author: t. sumida, r. ishii, t. yanagisawa, s. yokoyama, m. ito, riken structural genomics/proteomics initiative (rsgi)
Keywords: rsgi
- 3glx.pdb.
transcription 12-mar-09 3glx
Ni
Title: crystal structure analysis of the dtxr(e175k) complexed with ni(ii)
Author: j. a. d'aquino, a. denninger, a. moulin, k. e. d'aquino, d. ringe
Keywords: regulator, dtxr, helix-turn-helix, metal ion, activation, dna-binding, ferrous iron, cytoplasm, transcription, transcriptional regulation, transcriptional regulator, iron, transcription regulation
- 3gnc.pdb.
oxidoreductase 16-mar-09 3gnc
Title: crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei with fragment 6421
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: structural genomics, seattle structural genomics center for infectious disease, ssgcid
- 3gnu.pdb.
toxin 18-mar-09 3gnu
Cl
Title: toxin fold as basis for microbial attack and plant defense
Author: c. ottmann, b. luberacki, i. kuefner, w. koch, f. brunner, m. weyand, l. mattinen, m. pirhonen, g. anderluh, h. u. seitz, t. nuernberger, c. oecking
Keywords: phytopathogenic, oomycete
- 3gnz.pdb.
toxin 18-mar-09 3gnz
Mg
Title: toxin fold for microbial attack and plant defense
Author: c. ottmann, b. luberacki, i. kuefner, w. koch, f. brunner, m. weyand, l. mattinen, m. pirhonen, g. anderluh, h. u. seitz, t. nuernberger, c. oecking
Keywords: necrosi, ethyleneinducing, immunityassociated responses, plants
- 3gop.pdb.
transferase 19-mar-09 3gop
Title: crystal structure of the egf receptor juxtamembrane and kinase domains
Author: s. h. choi, d. alvarado, k. moravcevic, m. a. lemmon
Keywords: phosphoprotein, polymorphism, receptor, secreted, transferase, transmembrane, tyrosine- protein kinase, ubl conjugation
- 3gox.pdb.
hydrolase/dna 20-mar-09 3gox
Zn Na
Title: crystal structure of the beta-beta-alpha-me type ii restriction endonuclease hpy99i in the absence of edta
Author: m. sokolowska, h. czapinska, m. bochtler
Keywords: restriction enzyme, hpy99i, pseudopalindrome, hydrolase/dna complex
- 3gsz.pdb.
transferase 27-mar-09 3gsz
Title: structure of the genotype 2b hcv polymerase
Author: e. h. rydberg, a. carfi
Keywords: hcv, transferase
- 3guh.pdb.
transferase 30-mar-09 3guh
Title: crystal structure of wild-type e.coli gs in complex with adp and dgm
Author: f. sheng, j. geiger
Keywords: gt-b fold, rossmann fold, closed-form, adp and intermediate d-glucopyranosylium binding, glycogen biosynthesis, glycosyltransferase, transferase
- 3gvq.pdb.
lyase 31-mar-09 3gvq
Title: urod single-chain dimer
Author: c. p. hill, j. d. phillips, c. warby, f. g. whitby, j. p. kushner
Keywords: uroporphyrinogen, decarboxylase, alpha-8-beta-8 barrel, lyase, acetylation, cytoplasm, disease mutation, heme biosynthesis, phosphoprotein, porphyrin biosynthesis
- 3gvr.pdb.
lyase 31-mar-09 3gvr
Title: single-chain urod y164g (gy) mutation
Author: c. p. hill, j. d. phillips, f. g. whitby, c. warby
Keywords: decarboxylase, lyase, heme biosynthesis, acetylation, cytoplasm, disease mutation, phosphoprotein, porphyrin biosynthesis
- 3gvv.pdb.
lyase 31-mar-09 3gvv
Title: single-chain urod y164g (gy) mutation
Author: c. p. hill, j. d. phillips, f. g. whitby, c. warby, j. p. kushner
Keywords: decarboxylase, lyase, heme biosynthesis, acetylation, cytoplasm, disease mutation, phosphoprotein, porphyrin biosynthesis
- 3gw0.pdb.
lyase 31-mar-09 3gw0
Title: urod mutant g318r
Author: c. p. hill, j. d. phillips, f. g. whitby, c. warby, j. p. kushner
Keywords: decarboxylase, lyase, heme biosynthesis. porphyria, acetylation, cytoplasm, disease mutation, heme biosynthesis, phosphoprotein, porphyrin biosynthesis
- 3gw3.pdb.
lyase 31-mar-09 3gw3
Title: human urod mutant k297n
Author: c. p. hill, j. d. phillips, f. g. whitby, c. warby, j. p. kushner
Keywords: decarboxylase, lyase, heme biosynthesis, porphyria, acetylation, cytoplasm, disease mutation, phosphoprotein, porphyrin biosynthesis
- 3gwd.pdb.
oxidoreductase 31-mar-09 3gwd
Title: closed crystal structure of cyclohexanone monooxygenase
Author: i. a. mirza, b. j. yachnin, a. m. berghuis
Keywords: monooxygenase, oxidoreductase
- 3gwf.pdb.
oxidoreductase 01-apr-09 3gwf
Title: open crystal structure of cyclohexanone monooxygenase
Author: i. a. mirza, b. j. yachnin, a. m. berghuis
Keywords: monooxygenase, oxidoreductase
- 3gwl.pdb.
oxidoreductase 01-apr-09 3gwl
Title: crystal structure of asfv pb119l, a viral sulfhydryl oxidase
Author: m. hakim, d. fass
Keywords: five-helix bundle, cytoplasm, disulfide bond, fad, flavoprotein, late protein, oxidoreductase, virulence
- 3gwn.pdb.
oxidoreductase 01-apr-09 3gwn
Title: crystal structure of the fad binding domain from mimivirus sulfhydryl oxidase r596
Author: m. hakim, d. fass
Keywords: homodimer, disulfide bond, fad, flavoprotein, oxidoreductase, virion
- 3gx0.pdb.
transferase 01-apr-09 3gx0
Title: crystal structure of gsh-dependent disulfide bond oxidoreductase
Author: j. e. ladner, j. m. harp, m. c. wadington, r. n. armstrong
Keywords: glutathione, glutathione disulfide, disulfide bond oxidoreductase
- 3gxg.pdb.
hydrolase 02-apr-09 3gxg
Cl Se
Title: crystal structure of putative phosphatase (duf442) (yp_001181608.1) from shewanella putrefaciens cn-32 at 1.60 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative phosphatase (duf442), structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, tyrosine phosphatase, hydrolase
- 3gyt.pdb.
transcription 05-apr-09 3gyt
Title: nuclear receptor daf-12 from parasitic nematode strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 4
Author: x. e. zhou, z. wang, k. suino-powell, d. l. motola, a. conneely, c. ogata, k. k. sharma, r. j. auchus, s. a. kliewer, h. e. xu, d. j. mangelsdorf
Keywords: ligand binding domain, dafachronic acid, src1, nematode, strongyloides stercoralis, dna-binding, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc, zinc-finger
- 3gyu.pdb.
transcription 05-apr-09 3gyu
Se
Title: nuclear receptor daf-12 from parasitic nematode strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 7
Author: x. e. zhou, z. wang, k. suino-powell, d. l. motola, a. conneely, c. ogata, k. k. sharma, r. j. auchus, s. a. kliewer, h. e. xu, d. j. mangelsdorf
Keywords: ligand binding domain, dafachronic acid, src1, nematode, strongyloides stercoralis, dna-binding, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc, zinc-finger
- 3gyz.pdb.
chaperone 06-apr-09 3gyz
Na
Title: crystal structure of ipgc from shigella flexneri
Author: m. lunelli, r. k. lokareddy, a. zychlinsky, m. kolbe
Keywords: tetratricopeptide repeat, tpr, chaperone, cytoplasm, plasmid, virulence
- 3gz1.pdb.
chaperone 06-apr-09 3gz1
Title: crystal structure of ipgc in complex with the chaperone binding region of ipab
Author: m. lunelli, r. k. lokareddy, a. zychlinsky, m. kolbe
Keywords: tpr, chaperone, chaperone binding region, cytoplasm, plasmid, virulence, membrane, secreted, transmembrane
- 3h04.pdb.
structural genomics, unknown function 08-apr-09 3h04
Title: the crystal structure of the protein with unknown function from staphylococcus aureus subsp. aureus mu50
Author: r. zhang, c. tesar, a. sather, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, mcsg, psi, protein structure initiative, midwest center for structural genomics, unknown function
- 3h08.pdb.
hydrolase 08-apr-09 3h08
Mg
Title: crystal structure of the ribonuclease h1 from chlorobium tepidum
Author: k. ratcliff, j. corn, s. marqusee
Keywords: 3d-structure, endonuclease, hydrolase, magnesium, metal-binding, nuclease
- 3h0b.pdb.
hydrolase 08-apr-09 3h0b
F
Title: discovery of aminoheterocycles as a novel beta-secretase inhibitor class
Author: t. j. allison
Keywords: alternative splicing, disulfide bond, glycoprotein, hydrolase, membrane, polymorphism, protease, transmembrane, zymogen
- 3h0y.pdb.
transferase 10-apr-09 3h0y
Cl F
Title: aurora a in complex with a bisanilinopyrimidine
Author: c. wiesmann, m. h. ultsch, a. g. cochran
Keywords: cell cycle, serine/threonine, protein kinase, atp-binding, kinase, nucleotide-binding, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
- 3h0z.pdb.
transferase 10-apr-09 3h0z
Cl F
Title: aurora a in complex with a bisanilinopyrimidine
Author: c. wiesmann, m. h. ultsch, a. g. cochran
Keywords: cell cycle, serine/threonine, protein kinase, atp-binding, kinase, nucleotide-binding, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
- 3h10.pdb.
transferase 10-apr-09 3h10
Cl F
Title: aurora a inhibitor complex
Author: c. wiesmann, m. h. ultsch, a. g. cochran
Keywords: cell cycle, serine/threonine, protein kinase, atp-binding, kinase, nucleotide-binding, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
- 3h1p.pdb.
hydrolase 13-apr-09 3h1p
Title: mature caspase-7 i213a with devd-cho inhibitor bound to active site
Author: w. a. witkowski, j. a. hardy
Keywords: compensatory mechanism, apoptosis, cell death, cysteine protease, caspase-7, alternative splicing, cytoplasm, hydrolase, polymorphism, thiol protease, zymogen
- 3h2x.pdb.
hydrolase 14-apr-09 3h2x
Title: crystal structure of the human lymphoid tyrosine phosphatase catalytic domain
Author: s. j. tsai, u. sen
Keywords: alternative splicing, cytoplasm, hydrolase, polymorphism, protein phosphatase, systemic lupus erythematosus
- 3h3c.pdb.
transferase 16-apr-09 3h3c
F
Title: crystal structure of pyk2 in complex with sulfoximine- substituted trifluoromethylpyrimidine analog
Author: s. han, a. mistry
Keywords: kinase, alternative splicing, atp-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein, polymorphism, transferase, tyrosine-protein kinase
- 3h5m.pdb.
transport protein 22-apr-09 3h5m
Title: structure of an amino acid antiporter
Author: x. gao, f. lu, l. zhou, j. wang, y. shi
Keywords: antiporter, amino-acid transport, antiport, cell inner membrane, cell membrane, membrane, transmembrane, transport, transport protein
- 3h5v.pdb.
transport protein 22-apr-09 3h5v
Title: crystal structure of the glur2-atd
Author: r. jin, s. k. singh, s. gu, h. furukawa, a. sobolevsky, j. zhou, y. jin, e. gouaux
Keywords: phosphoprotein, postsynaptic cell membrane, receptor, rna editing, transmembrane, transport, transport protein
- 3h5w.pdb.
transport protein 22-apr-09 3h5w
Title: crystal structure of the glur2-atd in space group p212121 without solvent
Author: r. jin, s. k. singh, s. gu, h. furukawa, a. sobolevsky, j. zhou, y. jin, e. gouaux
Keywords: phosphoprotein, postsynaptic cell membrane, receptor, rna editing, transmembrane, transport, transport protein
- 3h6b.pdb.
transport protein 23-apr-09 3h6b
Title: structure of an amino acid antiporter
Author: f. lu, l. zhou, x. gao, j. wang, y. shi
Keywords: amino acid, antiporter, amino-acid transport, antiport, cell inner membrane, cell membrane, membrane, transmembrane, transport, transport protein
- 3h95.pdb.
gene regulation 30-apr-09 3h95
Title: crystal structure of the nudix domain of nudt6
Author: l. tresaugues, m. moche, c. h. arrowsmith, h. berglund, c. bountra, r. collins, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, t. karlberg, t. kotyenova, a. kotzch, t. k. nielsen, t. nyman, c. persson, j. sagemark, h. schueler, p. schutz, m. i. siponen, l. svensson, a. g. thorsell, s. van den berg, j. weigelt, m. welin, m. wisniewska, p. nordlund, structural genomics consortium (sgc)
Keywords: nudix, hydrolase, gfg, gfg-1, fgf2as, structural genomics, structural genomics consortium, sgc, sgc stockholm, alternative splicing, isopeptide bond, polymorphism, ubl conjugation, gene regulation
- 3hb7.pdb.
hydrolase 04-may-09 3hb7
Na Se
Title: the crystal structure of an isochorismatase-like hydrolase from alkaliphilus metalliredigens to 2.3a
Author: a. j. stein, x. xu, h. cui, j. ng, a. edwards, a. savchenko, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: hydrolase, alkaliphilus,metalliredigens, psi, mcsg, structural genomics, midwest center for structural genomics, protein structure initiative
- 3hc8.pdb.
hydrolase 05-may-09 3hc8
Mg Zn
Title: investigation of aminopyridiopyrazinones as pde5 inhibitors: evaluation of modifications to the central ring system.
Author: r. o. hughes, w. c stallings, j. w. cubbage, j. m. williams
Keywords: pde-5,inhibition, alternative splicing, camp, hydrolase, phosphoprotein, polymorphism allosteric enzyme, cgmp, cgmp-binding, magnesium, metal-binding, nucleotide- binding, zinc
- 3hdz.pdb.
hydrolase 07-may-09 3hdz
Mg Zn
Title: identification, synthesis, and sar of amino substituted pyrido[3,2b]pryaziones as potent and selective pde5 inhibitors
Author: j. w. cubbage, d. g. brown, e. j. jacobsen, j. k. walker, r. o. hughes
Keywords: pde-5,inhibition, alternative splicing, camp, hydrolase, phosphoprotein, polymorphism allosteric enzyme, cgmp, cgmp-binding, magnesium, metal-binding, nucleotide- binding, zinc
- 3he0.pdb.
transcription regulator 07-may-09 3he0
Cl Se
Title: the structure of a putative transcriptional regulator tetr family protein from vibrio parahaemolyticus.
Author: m. e. cuff, r. hendricks, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: transcription regulation, transcription regulator
- 3hh1.pdb.
transferase 14-may-09 3hh1
Se
Title: the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls
Author: m. e. cuff, a. sather, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: chlorobium tepidum, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, methyltransferase
- 3hhf.pdb.
transcription regulator 15-may-09 3hhf
Cl Se
Title: structure of crga regulatory domain, a lysr-type transcriptional regulator from neisseria meningitidis.
Author: s. sainsbury, j. ren, r. j. owens, d. i. stuart, oxford protein production facility (oppf)
Keywords: transcription factor, lysr, structural genomics, oxford protein production facility, oppf, dna-binding, transcription, transcription regulation, transcription regulator
- 3hhg.pdb.
transcription regulator 15-may-09 3hhg
Title: structure of crga, a lysr-type transcriptional regulator from neisseria meningitidis.
Author: s. sainsbury, j. ren, r. j. owens, d. i. stuart, oxford protein production facility (oppf)
Keywords: transcription factor, lysr, structural genomics, oxford protein production facility, oppf, dna-binding, transcription, transcription regulation, transcription regulator
- 3hhl.pdb.
structural genomics, unknown function 15-may-09 3hhl
Cl Se
Title: crystal structure of methylated rpa0582 protein
Author: p. sledz, e. niedzialkowska, m. chruszcz, p. porebski, v. yim, m. kudritska, m. d. zimmerman, e. evdokimova, a. savchenko, a. edwards, a. joachimiak, w. minor, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi-2, protein structure initiative, reductive methylation, midwest center for structural genomics, mcsg, unknown function
- 3hic.pdb.
transferase 19-may-09 3hic
Mg Se
Title: the crystal structure of phosphofructokinase(lin2199)from listeria innocua
Author: l. satyanarayana, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: 1-phosphofructokinase, phosphotransferase,nysgxrc,11206n,psi2, structural genomics, , protein structure initiative, new york sgx research center for structural genomics
- 3hk3.pdb.
hydrolase 22-may-09 3hk3
Title: crystal structure of murine thrombin mutant w215a/e217a (one molecule in the asymmetric unit)
Author: p. s. gandhi, m. j. page, z. chen, l. bush-pelc, e. di cera
Keywords: acute phase, blood coagulation, calcium, cleavage on pair of basic residues, disulfide bond, gamma- carboxyglutamic acid, glycoprotein, hydrolase, kringle, protease, zymogen
- 3hk6.pdb.
hydrolase 22-may-09 3hk6
Title: crystal structure of murine thrombin mutant w215a/e217a (two molecules in the asymmetric unit)
Author: p. s. gandhi, m. j. page, z. chen, l. bush-pelc, e. di cera
Keywords: acute phase, blood coagulation, calcium, cleavage on pair of basic residues, disulfide bond, gamma- carboxyglutamic acid, glycoprotein, hydrolase, kringle, protease, zymogen
- 3hki.pdb.
hydrolase 23-may-09 3hki
Title: crystal structure of murine thrombin mutant w215a/e217a in complex with the extracellular fragment of human par1
Author: p. s. gandhi, m. j. page, z. chen, l. bush-pelc, e. di cera
Keywords: g-protein coupled receptor, membrane, phosphoprotein, polymorphism, receptor, transducer, transmembrane
- 3hkj.pdb.
hydrolase 23-may-09 3hkj
Title: crystal structure of human thrombin mutant w215a/e217a in complex with the extracellular fragment of human par1
Author: p. s. gandhi, m. j. page, z. chen, l. bush-pelc, e. di cera
Keywords: polymorphism, protease, secreted, zymogen, cell membrane, g-protein coupled receptor, membrane, phosphoprotein, receptor, transducer, transmembrane
- 3hlt.pdb.
hydrolase 28-may-09 3hlt
Cl Na
Title: the crystal structure of human haloacid dehalogenase-like hydrolase domain containing 2 (hdhd2)
Author: e. ugochukwu, n. shafqat, w. w. yue, r. cocking, j. e. bray, j. r. c. muniz, t. krojer, f. von delft, c. bountra, c. h. arrowsmith, j. weigelt, a. edwards, u. oppermann, structural genomics consortium (sgc)
Keywords: haloacid dehalogenase-like hydrolase domain containing 2, structural genomics, structural genomics consortium, sgc, alternative splicing, coiled coil, polymorphism, hydrolase
- 3hlu.pdb.
structural genomics, unknown function 28-may-09 3hlu
Se
Title: crystal structure of uncharacterized protein conserved in bacteria duf2179 from eubacterium ventriosum
Author: y. kim, h. li, l. keigher, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3hm2.pdb.
transferase 28-may-09 3hm2
Mg Ca Se
Title: crystal structure of putative precorrin-6y c5,15- methyltransferase targeted domain from corynebacterium diphtheriae
Author: y. kim, l. bigelow, l. keigher, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, methyltransferase, transferase
- 3hmi.pdb.
transferase 29-may-09 3hmi
F
Title: the crystal structure of human abl2 in complex with 5-amino- 3-{[4-(aminosulfonyl)phenyl]amino}-n-(2,6-difluorophenyl)- 1h-1,2,4-triazole-1-carbothioamide
Author: e. ugochukwu, e. salah, a. barr, p. mahajan, b. shrestha, p. savitsky, a. chaikuad, c. allerston, f. von delft, c. bountra, c. h. arrowsmith, j. weigelt, a. edwards, s. knapp
Keywords: nucleotide-binding, phosphoprotein, polymorphism, sh2 domain, sh3 domain, transferase, tyrosine-protein kinase, structural genomics, structural genomics consortium, sgc
- 3hn0.pdb.
transport protein 29-may-09 3hn0
Se
Title: crystal structure of nitrate transport protein (yp_001302749.1) from parabacteroides distasonis atcc 8503 at 1.75 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: nitrate transport protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 3hnm.pdb.
structural genomics, unknown function 31-may-09 3hnm
Mg Se
Title: crystal structure of protein bt_411 (putative chitobiase, fragment 298-461) from bacteroides thetaiotaomicron, northeast structural genomics consortium target btr319d
Author: a. kuzin, m. abashidze, j. seetharaman, s. sahdev, r. xiao, c. ciccosanti, e. l. foote, d. lee, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: psi-2, protein structure initiative, northeast structural genomics consortium, nesg, btr319d.bt_411, structural genomics, unknown function
- 3hqk.pdb.
transport protein 07-jun-09 3hqk
Title: x-ray crystal structure of an arginine agmatine antiporter (adic) in complex with a fab fragment
Author: y. fang, h. jayaram, t. shane, l. kolmakova-partensky, f. wu, c. williams, y. xiong, c. miller
Keywords: transmembrane, transport, transport protein
- 3hr9.pdb.
hydrolase 09-jun-09 3hr9
Ca
Title: the truncated fibrobacter succinogenes 1,3-1,4-beta-d- glucanase f40i mutant
Author: l. c. tsai, h. c. huang, c. h. hsiao
Keywords: 3-1,4-beta-d-glucanase, carbohydrate ch-pi stacking interactions, tris inhibition, hydrolase, glycosidase
- 3hrm.pdb.
transcription regulator 09-jun-09 3hrm
Se
Title: crystal structure of staphylococcus aureus protein sarz in sulfenic acid form
Author: c. b. poor, e. duguid, p. a. rice, c. he
Keywords: cysteine sulfenic acid, marr-family transcriptional regulator, dna-binding, transcription, transcription regulation, transcription regulator
- 3hrz.pdb.
immune system 10-jun-09 3hrz
Mg K
Title: cobra venom factor (cvf) in complex with human factor b
Author: b. j. c. janssen, l. gomes, r. i. koning, d. i. svergun, a. j. koster, d. c. fritzinger, c. -w. vogel, p. gros
Keywords: secreted, thioester bond, alternative splicing, cleavage on pair of basic residues, glycation, hydrolase, polymorphism, protease, sushi, zymogen, immune system
- 3hs0.pdb.
immune system 10-jun-09 3hs0
Mg
Title: cobra venom factor (cvf) in complex with human factor b
Author: b. j. c. janssen, l. gomes, r. i. koning, d. i. svergun, a. j. koster, d. c. fritzinger, c. -w. vogel, p. gros
Keywords: secreted, thioester bond, alternative splicing, cleavage on pair of basic residues, glycation, hydrolase, polymorphism, protease, sushi, zymogen, immune system
- 3hse.pdb.
transcription regulator 10-jun-09 3hse
Title: crystal structure of staphylococcus aureus protein sarz in reduced form
Author: c. b. poor, e. duguid, p. a. rice, c. he
Keywords: marr-family transcriptional regulator, dna-binding, transcription, transcription regulation, transcription regulator
- 3hsr.pdb.
transcription regulator 10-jun-09 3hsr
Title: crystal structure of staphylococcus aureus protein sarz in mixed disulfide form
Author: c. b. poor, e. duguid, p. a. rice, c. he
Keywords: cysteine disulfide, marr-family transcriptional regulator, dna-binding, transcription, transcription regulation, transcription regulator
- 3htr.pdb.
structural genomics, unknown function 12-jun-09 3htr
Zn Se
Title: crystal structure of prc-barrel domain protein from rhodopseudomonas palustris
Author: y. kim, c. tesar, r. jedrzejczak, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: photo-reaction-center domain, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3hty.pdb.
structural genomics, unknown function 12-jun-09 3hty
Se
Title: crystal structure of hypothetical protein bt_0869 from bacteroides thetaiotaomicron vpi-5482 (np_809782.1) from bacteriodes thetaiotaomicron vpi-5482 at 1.95 a resolution
Author: joint center for structural genomics, joint center for structural genomics (jcsg)
Keywords: hypothetical protein bt_0869 from bacteroides thetaiotaomicron vpi-5482, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
- 3huu.pdb.
transcription regulator 15-jun-09 3huu
Title: crystal structure of transcription regulator like protein from staphylococcus haemolyticus
Author: r. agarwal, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: psi-ii, nysgxrc, 11235m, transcription regulator, lac i, structural genomics, protein structure initiative, new york sgx research center for structural genomics
- 3hx8.pdb.
isomerase 19-jun-09 3hx8
Se
Title: crystal structure of putative ketosteroid isomerase (np_103587.1) from mesorhizobium loti at 1.45 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative ketosteroid isomerase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 3hxk.pdb.
hydrolase 20-jun-09 3hxk
Se
Title: crystal structure of a sugar hydrolase (yeeb) from lactococcus lactis, northeast structural genomics consortium target kr108
Author: f. forouhar, m. su, j. seetharaman, m. mao, r. xiao, c. ciccosanti, e. l. foote, m. maglaqui, l. zhao, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, hydrolase
- 3hxl.pdb.
structural genomics, unknown function 20-jun-09 3hxl
Se
Title: crystal structure of the sheath tail protein (dsy3957) from desulfitobacterium hafniense, northeast structural genomics consortium target dhr18
Author: f. forouhar, h. neely, j. seetharaman, s. sahdev, r. xiao, c. ciccosanti, m. maglaqui, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 3hxp.pdb.
transport protein 21-jun-09 3hxp
Se
Title: crystal structure of the fhud fold-family bsu3320, a periplasmic binding protein component of a fep/fec-like ferrichrome abc transporter from bacillus subtilis. northeast structural genomics consortium target sr577
Author: f. forouhar, h. neely, j. seetharaman, f. fang, r. xiao, k. cunningham, l. ma, c. x. chen, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: transport, transport protein
- 3hy7.pdb.
hydrolase 22-jun-09 3hy7
Zn Ca
Title: crystal structure of the catalytic domain of adamts-5 in complex with marimastat
Author: h. -s. shieh, j. m. williams, n. caspers, k. j. mathis, m. d. tortorella, a. tomasselli
Keywords: zinc, zymogen
- 3hy9.pdb.
hydrolase 22-jun-09 3hy9
Zn Ca
Title: crystal structure of the catalytic domain of adamts-5 in complex with an amino-2-indanol compound
Author: h. -s. shieh, j. m. williams, n. caspers, k. j. mathis, m. d. tortorella, a. tomasselli
Keywords: central five stranded beta-sheet, hydrolase
- 3hyg.pdb.
hydrolase 22-jun-09 3hyg
Zn Ca
Title: crystal structure of the catalytic domain of adamts-5 in complex with an amino-2-indanol compound
Author: h. -s. shieh, j. m. williams, n. caspers, k. j. mathis, m. d. tortorella, a. tomasselli
Keywords: zinc, zymogen
- 3hz7.pdb.
structural genomics, unknown function 23-jun-09 3hz7
Se
Title: crystal structure of the sira-like protein (dsy4693) from desulfitobacterium hafniense, northeast structural genomics consortium target dhr2a
Author: f. forouhar, s. lew, j. seetharaman, s. sahdev, r. xiao, c. ciccosanti, m. maglaqui, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 3hzd.pdb.
toxin 23-jun-09 3hzd
Li
Title: crystal structure of bothropstoxin-i (bthtx-i), a pla2 homologue from bothrops jararacussu venom
Author: m. c. o. silva, d. p. marchi-salvador, c. a. h. fernandes, a. m. soares, m. r. m. fontes
Keywords: snake venom, phospholipase a2, lys49-pla2s, myotoxicity, antibiotic, antimicrobial, disulfide bond, myotoxin, secreted, toxin
- 3hze.pdb.
structural genomics, unknown function 23-jun-09 3hze
Se
Title: crystal structure of ycf54 protein from thermosynechococcus elongatus, northeast structural genomics consortium target ter59
Author: a. kuzin, m. abashidze, j. seetharaman, s. sahdev, r. xiao, c. ciccosanti, d. lee, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, ter59, q8dit2_synel, unknown function
- 3hzg.pdb.
transferase 23-jun-09 3hzg
Title: crystal structure of mycobacterium tuberculosis thymidylate synthase x bound with fad
Author: b. l. staker, p. rathod, j. hunter
Keywords: fad, thymidylate synthase, flavoprotein, methyltransferase, nucleotide biosynthesis, transferase, structural genomics, seattle structural genomics center for infectious disease, ssgcid
- 3hzn.pdb.
oxidoreductase 23-jun-09 3hzn
Cl Na Se
Title: structure of the salmonella typhimurium nfnb dihydropteridine reductase
Author: s. m. anderson, z. wawrzak, o. onopriyenko, t. skarina, w. f. anderson, a. savchenko, center for structural genomics of infectious diseases (csgid)
Keywords: 3 layer sandwich, fmn-dependent nitroreductase like, flavoprotein, fmn, nad, nadp, oxidoreductase, structural genomics, center for structural genomics of infectious diseases, csgid
- 3hzp.pdb.
structural genomics, unknown function 24-jun-09 3hzp
Se
Title: crystal structure of ntf2-like protein of unknown function mn2a_0505 from prochlorococcus marinus (yp_291699.1) from prochlorococcus sp. natl2a at 1.40 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: ntf2-like protein of unknown function mn2a_0505 from prochlorococcus marinus, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
- 3hzs.pdb.
transferase 24-jun-09 3hzs
Title: s. aureus monofunctional glycosyltransferase (mtga)in complex with moenomycin
Author: h. heaslet, a. a. miller, b. shaw, a. mistry
Keywords: peptidoglycan, monofunctional, moenomycin, cell membrane, cell shape, cell wall biogenesis/degradation, glycosyltransferase, membrane, peptidoglycan synthesis, transferase, transmembrane
- 3hzu.pdb.
transferase 24-jun-09 3hzu
Title: crystal structure of probable thiosulfate sulfurtransferase ssea (rhodanese) from mycobacterium tuberculosis
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: ssgcid, infectious disease, tuberculosis, transferase, structural genomics, seattle structural genomics center for infectious disease
- 3i1g.pdb.
metal binding protein 26-jun-09 3i1g
Title: crystal structure of a gcn4 leucine zipper mutant at 1.6 a resolution
Author: j. s. diao, a. tortajada, j. i. yeh
Keywords: gcn4, peptide, synthetic peptide, helix, double helix, activator, amino-acid biosynthesis, dna- binding, nucleus, phosphoprotein, transcription, transcription regulation, metal binding protein
- 3i1i.pdb.
transferase 26-jun-09 3i1i
Se
Title: x-ray crystal structure of homoserine o-acetyltransferase from bacillus anthracis
Author: j. osipiuk, m. zhou, s. grimshaw, w. f. anderson, a. joachimiak
Keywords: idp01610, homoserine, o- acetyltransferase, bacillus anthracis, transferase, center for structural genomics of infectious diseases, csgid
- 3i2c.pdb.
immune system 29-jun-09 3i2c
Title: crystal structure of anti-il-23 antibody cnto4088
Author: a. teplyakov, g. obmolova, g. l. gilliland
Keywords: antibody, fab, immune system
- 3iy8.pdb.
ribosome 16-apr-09 3iy8
(electron microscopy)
Title: leishmania tarentolae mitonchondrial ribosome small subunit
Author: m. r. sharma, t. m. booth, l. simpson, d. a. maslov, r. k. agrawal
Keywords: methylation, endonuclease, hydrolase, nuclease
- 3iy9.pdb.
ribosome 20-apr-09 3iy9
(electron microscopy)
Title: leishmania tarentolae mitochondrial large ribosomal subunit model
Author: m. r. sharma, t. m. booth, l. simpson, d. a. maslov, r. k. agrawal
Keywords: alternative splicing
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