Recent PDB releases or updates: week of 12 June 2009
- 146d.pdb.
dna 09-nov-93 146d
Mg
(solution NMR)
Title: solution structure of the mithramycin dimer-dna complex
Author: m. sastry, d. j. patel
Keywords: nmr, mithramycin dimer
- 1ai0.pdb.
hormone 30-apr-97 1ai0
Zn
(solution NMR)
Title: r6 human insulin hexamer (non-symmetric), nmr, 10 structures
Author: x. chang, a. m. m. jorgensen, p. bardrum, j. j. led
Keywords: glucose metabolism
- 1aiy.pdb.
hormone 30-apr-97 1aiy
Zn
(solution NMR)
Title: r6 human insulin hexamer (symmetric), nmr, 10 structures
Author: x. chang, a. m. m. jorgensen, p. bardrum, j. j. led
Keywords: glucose metabolism
- 1b0k.pdb.
lyase 11-nov-98 1b0k
Fe
Title: s642a:fluorocitrate complex of aconitase
Author: s. j. lloyd, h. lauble, g. s. prasad, c. d. stout
Keywords: iron-sulfur, mitochondrion, transit peptide, lyase
- 1e50.pdb.
transcription 13-jul-00 1e50
Title: aml1/cbf complex
Author: a. j. warren, j. bravo, r. l. williams, t. h. rabbits
Keywords: transcription
- 1gpa.pdb.
glycogen phosphorylase 13-nov-90 1gpa
Title: structural mechanism for glycogen phosphorylase control by phosphorylation and amp
Author: d. barford, s. -h. hu, l. n. johnson
- 1hq7.pdb.
dna 14-dec-00 1hq7
Title: crystallographic studies of a dodecamer b-dna d- (gcaaacgtttgc)2
Author: s. chen, h. m. berman
Keywords: dna
- 1ilu.pdb.
metalloprotein 12-oct-95 1ilu
Cu
Title: x-ray crystal structure the two site-specific mutants ile7ser and phe110ser of azurin from pseudomonas aeruginosa
Author: c. hammann, h. nar, r. huber, a. messerschmidt
Keywords: metalloprotein
- 1j6y.pdb.
isomerase 15-may-01 1j6y
(solution NMR)
Title: solution structure of pin1at from arabidopsis thaliana
Author: i. landrieu, j. m. wieruszeski, r. wintjens, d. inze, g. lippens
Keywords: parvulin, pin1, phosphorylation
- 1jhg.pdb.
complex (regulatory protein/peptide) 19-jul-96 1jhg
Title: trp repressor mutant v58i
Author: c. lawson
Keywords: dna-binding regulatory protein
- 1ld4.pdb.
virus 08-apr-02 1ld4
(electron microscopy)
Title: placement of the structural proteins in sindbis virus
Author: w. zhang, s. mukhopadhyay, s. v. pletnev, t. s. baker, r. j. kuhn, m. g. rossmann
Keywords: alphavirus structure, cryo-electron microscopy, glycoprotein organization, nucleocapsid structure, transmembrane coiled coils, icosahedral virus
- 1mi7.pdb.
transcription 22-aug-02 1mi7
Title: crystal structure of domain swapped trp aporepressor in 30%(v/v) isopropanol
Author: c. l. lawson, b. benoff, t. berger, h. m. berman, j. carey
Keywords: dna binding protein, alcohol induced conformational rearrangement, transcription
- 1mto.pdb.
transferase 21-sep-02 1mto
Title: crystal structure of a phosphofructokinase mutant from bacillus stearothermophilus bound with fructose-6-phosphate
Author: m. r. riley-lovingshimer, d. r. ronning, j. c. sacchettini, g. d. reinhart
Keywords: fructose-6-phosphate, tryptophan-shift, transferase
- 1n2d.pdb.
cell cycle 22-oct-02 1n2d
Title: ternary complex of mlc1p bound to iq2 and iq3 of myo2p, a class v myosin
Author: m. terrak, g. wu, w. f. stafford, r. c. lu, r. dominguez
Keywords: iq motif, myosin light chain, cell cycle
- 1nsh.pdb.
metal binding protein 27-jan-03 1nsh
(solution NMR)
Title: solution structure of rabbit apo-s100a11 (19 models)
Author: a. c. dempsey, m. p. walsh, g. s. shaw
Keywords: ef hand, helix-loop-helix, s100, annexin, metal binding protein
- 1nzu.pdb.
hydrolase 19-feb-03 1nzu
Title: wild-type penicillin-binding protein 5 from e. coli modified by beta-mercaptoethanol
Author: g. nicola, r. a. nicholas, c. davies
Keywords: penicillin-binding protein, dd- carboxypeptidase, hydrolase
- 1o0k.pdb.
dna 22-feb-03 1o0k
Na
Title: structure of the first parallel dna quadruplex-drug complex
Author: g. r. clark, p. d. pytel, c. j. squire, s. neidle
Keywords: parallel quadruplex, dna
- 1o77.pdb.
immune system/membrane protein 24-oct-02 1o77
Title: crystal structure of the c713s mutant of the tir domain of human tlr2
Author: x. tao, y. xu, z. ye, a. a. beg, l. tong
Keywords: known biological activity receptor, immune response, inflammatory response, signal, transmembrane, repeat, leucine-rich repeat, glycoprotein, 3d-structure.
- 1ovr.pdb.
de novo protein 27-mar-03 1ovr
Mn
Title: crystal structure of four-helix bundle model di-mn(ii)-df1- l13
Author: l. di costanzo, s. geremia
Keywords: protein design, de novo protein
- 1ovu.pdb.
de novo protein 27-mar-03 1ovu
Co
Title: crystal structure of four-helix bundle model di-co(ii)-df1- l13a (form i)
Author: l. di costanzo, s. geremia
Keywords: protein design, de novo protein
- 1ovv.pdb.
de novo protein 27-mar-03 1ovv
Co
Title: crystal structure of four-helix bundle model di-co(ii)-df1- l13a (form ii)
Author: l. di costanzo, s. geremia
Keywords: protein design, de novo protein
- 1pm1.pdb.
blood clotting inhibitor 09-jun-03 1pm1
Fe
Title: crystal structure of nitrophorin 2 l122v/l132v mutant complex with imidazole
Author: a. weichsel, w. r. montfort
Keywords: lipocalin, imidazole, ferric heme, blood clotting inhibitor
- 1qg3.pdb.
structural protein 19-apr-99 1qg3
As
Title: crystal structure of a tandem pair of fibronectin type iii domains from the cytoplasmic tail of integrin alpha6 beta4
Author: j. m. de pereda, g. wiche, r. c. liddington
Keywords: hemidesmosome, fibronectin, carcinoma, structural protein
- 1qr3.pdb.
hydrolase/hydrolase inhibitor 18-jun-99 1qr3
Ca
Title: structure of porcine pancreatic elastase in complex with fr901277, a novel macrocyclic inhibitor of elastases at 1.6 angstrom resolution
Author: i. nakanishi, t. kinoshita, a. sato, t. tada
Keywords: hydrolase/hydrolase inhibitor complex
- 1qwo.pdb.
hydrolase 03-sep-03 1qwo
Title: crystal structure of a phosphorylated phytase from aspergillus fumigatus, revealing the structural basis for its heat resilience and catalytic pathway
Author: t. xiang, q. liu, a. m. deacon, m. koshy, i. a. kriksunov, x. g. lei, q. hao, d. j. thiel
Keywords: beta sandwich, orthogonal bundle, glycoprotein, phosphohistidine, hydrolase
- 1r57.pdb.
transferase 09-oct-03 1r57
(solution NMR)
Title: nmr solution structure of a gcn5-like putative n- acetyltransferase from staphylococcus aureus. northeast structural genomics consortium target zr31
Author: j. r. cort, t. b. acton, l. ma, r. b. xiao, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: n-acetyltransferase, structural genomics, psi, protein structure initiative, northeast structural genomics consortium, nesg
- 1rd6.pdb.
hydrolase 05-nov-03 1rd6
Title: crystal structure of s. marcescens chitinase a mutant w167a
Author: n. n. aronson, b. a. halloran, m. f. alexyev, x. e. zhou, y. wang, e. j. meehan, l. chen
Keywords: hydrolase
- 1sdn.pdb.
hydrolase 13-feb-04 1sdn
Hg
Title: crystal structure of a deacylation-defective mutant of penicillin-binding protein 5 modified by mercury
Author: g. nicola, r. a. nicholas, c. davies
Keywords: penicllin-binding protein, dd- carboxypeptidase, hydrolase
- 1ski.pdb.
antimicrobial protein 05-mar-04 1ski
(solution NMR)
Title: structure of the antimicrobial hexapeptide cyc-(rryyrf) bound to dpc micelles
Author: c. appelt, j. a. soderhall, m. bienert, m. dathe, p. schmieder
Keywords: antimicrobial protein
- 1skk.pdb.
antimicrobial protein 05-mar-04 1skk
(solution NMR)
Title: structure of the antimicrobial hexapeptide cyc-(kkwwkf) bound to dpc micelles
Author: c. appelt, j. a. soderhall, m. bienert, m. dathe, p. schmieder
Keywords: antimicrobial protein
- 1skl.pdb.
antimicrobial protein 05-mar-04 1skl
(solution NMR)
Title: structure of the antimicrobial hexapeptide cyc-(rrnalnalrf) bound to dpc micelles
Author: c. appelt, j. a. soderhall, m. bienert, m. dathe, p. schmieder
Keywords: antimicrobial protein
- 1suj.pdb.
signaling protein 26-mar-04 1suj
Title: x-ray crystal structure of ambystoma tigrinum cone arrestin
Author: r. b. sutton, j. navarro
Keywords: signaling protein
- 1th5.pdb.
structural genomics, unknown function 01-jun-04 1th5
(solution NMR)
Title: solution structure of c-terminal domain of nifu-like protein from oryza sativa
Author: h. kumeta, k. ogura, m. asayama, s. katoh, e. katoh, f. inagaki
Keywords: structural genomics, program for rice genome research, unknown function
- 1tvg.pdb.
cell cycle 29-jun-04 1tvg
Sm Ca
Title: x-ray structure of human pp25 gene product, hspc034. northeast structural genomics target hr1958.
Author: a. p. kuzin, s. m. vorobiev, i. lee, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi, protein structure initiative, northeast structural genomics consortium, nesg
- 1tvi.pdb.
structural genomics, unknown function 29-jun-04 1tvi
(solution NMR)
Title: solution structure of tm1509 from thermotoga maritima: vt1, a nesgc target protein
Author: c. h. penhoat, h. s. atreya, s. kim, z. li, a. yee, r. xiao, d. murray, c. h. arrowsmith, t. szyperski, northeast structural genomics consortium (nesg)
Keywords: mixed 4-stranded beta sheet, four helix bundle, structural genomics, protein structure initiative, nesgc, psi, northeast structural genomics consortium, unknown function
- 1u5h.pdb.
lyase 27-jul-04 1u5h
Title: structure of citrate lyase beta subunit from mycobacterium tuberculosis
Author: c. w. goulding, t. lekin, c. y. kim, b. segelke, t. c. terwilliger, d. eisenberg, tb structural genomics consortium (tbsgc)
Keywords: structural genomics, psi, protein structure initiative, tb structural genomics consortium, tbsgc, lyase
- 1v5f.pdb.
oxidoreductase 22-nov-03 1v5f
Mg
Title: crystal structure of pyruvate oxidase complexed with fad and tpp, from aerococcus viridans
Author: m. t. hossain, k. suzuki, t. yamamoto, s. imamura, t. sekiguchi, a. takenaka
Keywords: flavoprotein
- 1v5g.pdb.
oxidoreductase 22-nov-03 1v5g
Mg
Title: crystal structure of the reaction intermediate between pyruvate oxidase containing fad and tpp, and substrate pyruvate
Author: m. t. hossain, k. suzuki, t. yamamoto, s. imamura, t. sekiguchi, a. takenaka
Keywords: flavoprotein
- 1v7r.pdb.
hydrolase 22-dec-03 1v7r
Title: structure of nucleotide triphosphate pyrophosphatase from pyrococcus horikoshii ot3
Author: n. k. lokanath, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, riken structural genomics/proteomics initiative, rsgi, hydrolase
- 1vj6.pdb.
hydrolase/signaling protein 03-feb-04 1vj6
(solution NMR)
Title: pdz2 from ptp-bl in complex with the c-terminal ligand from the apc protein
Author: t. walma, g. w. vuister
Keywords: complex, apc, nmr, protein-protein interaction, ptp-bl, c-terminus, hydrolase/signaling protein complex
- 1w0t.pdb.
dna-binding protein 11-jun-04 1w0t
Title: htrf1 dna-binding domain in complex with telomeric dna.
Author: r. i. court, l. m. chapman, l. fairall, d. rhodes
Keywords: dna-binding protein, homeodomain, mitosis, cell cycle, nuclear protein, chromosomal protein, phosphorylation, adp-ribosylation
- 1w0u.pdb.
dna-binding protein 11-jun-04 1w0u
Title: htrf2 dna-binding domain in complex with telomeric dna.
Author: r. i. court, l. m. chapman, l. fairall, d. rhodes
Keywords: dna-binding protein, homeodomain, mitosis, cell cycle, nuclear protein, chromosomal protein, phosphorylation, adp-ribosylation
- 1w89.pdb.
electron transport 17-sep-04 1w89
Title: structure of the reduced form of human thioredoxin 2
Author: a. smeets, c. evrard, j. p. declercq
Keywords: antioxidant enzyme, mitochondrion, electron transport
- 1wko.pdb.
signaling protein 01-jun-04 1wko
Title: terminal flower 1 (tfl1) from arabidopsis thaliana
Author: d. miller, m. j. banfield, v. j. winter, r. l. brady
Keywords: pebp, signaling protein
- 1wkp.pdb.
signaling protein 01-jun-04 1wkp
Title: flowering locus t (ft) from arabidopsis thaliana
Author: d. miller, m. j. banfield, v. j. winter, r. l. brady
Keywords: pebp, signaling protein
- 1wr8.pdb.
hydrolase 13-oct-04 1wr8
Title: crystal structure of hypothetical protein ph1421 from pyrococcus horikoshii.
Author: h. yamamoto, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
Keywords: had superfamily, structural genomics, riken structural genomics/proteomics initiative, rsgi, hydrolase
- 1wv3.pdb.
structural genomics, unknown function 10-dec-04 1wv3
Cl Se
Title: crystal structure of n-terminal domain of hypothetical protein sav0287 from staphylococcus aureus
Author: y. tanaka, y. yasutake, i. tanaka
Keywords: structural genomics, unknown function
- 1x11.pdb.
complex (peptide binding module/peptide)28-jul-97 1x11
Se
Title: x11 ptb domain
Author: c. -h. lee, z. zhang, j. kuriyan
Keywords: ptb domain
- 1x3k.pdb.
oxygen storage/transport 09-may-05 1x3k
Fe
Title: crystal structure of a hemoglobin component (ta-v) from tokunagayusurika akamusi
Author: t. kuwada, t. hasegawa, s. sato, i. sato, k. ishikawa, t. takagi, f. shishikura
Keywords: diptera, tokunagayusurika akamusi, midge larva, oxygen storage/transport complex
- 1x46.pdb.
oxygen storage/transport 14-may-05 1x46
Fe
Title: crystal structure of a hemoglobin component (ta-vii) from tokunagayusurika akamusi
Author: t. kuwada, t. hasegawa, s. sato, i. sato, k. ishikawa, t. takagi, f. shishikura
Keywords: diptera, tokunagayusurika akamusi, midge larva, oxygen storage/transport complex
- 1xcv.pdb.
dna binding protein 03-sep-04 1xcv
Ni
Title: crystal structure of (h79ac102d)dtxr complexed with nickel(ii)
Author: j. a. d'aquino, d. ringe
Keywords: dna binding protein
- 1xm6.pdb.
hydrolase 01-oct-04 1xm6
Mg Zn
Title: catalytic domain of human phosphodiesterase 4b in complex with (r)-mesopram
Author: g. l. card, b. p. england, y. suzuki, d. fong, b. powell, b. lee, c. luu, m. tabrizizad, s. gillette, p. n. ibrahim, d. r. artis, g. bollag, m. v. milburn, s. -h. kim, j. schlessinger, k. y. j. zhang
Keywords: (r)-mesopram, hydrolase
- 1xpw.pdb.
structural genomics, unknown function 09-oct-04 1xpw
(solution NMR)
Title: solution nmr structure of human protein hspco34. northeast structural genomics target hr1958
Author: t. a. ramelot, r. xiao, l. c. ma, t. b. acton, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: jellyroll, beta- sandwich, unknown function
- 1xs0.pdb.
hydrolase inhibitor 18-oct-04 1xs0
Title: structure of the e. coli ivy protein
Author: c. abergel, v. monchois, d. byrn, j. c. lazzaroni, j. m. claverie
Keywords: dimer, hydrolase inhibitor
- 1xw6.pdb.
transferase 29-oct-04 1xw6
Title: 1.9 angstrom resolution structure of human glutathione s- transferase m1a-1a complexed with glutathione
Author: y. patskovsky, l. patskovska, s. c. almo, i. listowsky
Keywords: glutathione, conjugation, detoxification, cytosolic, dimer, active site
- 1y9x.pdb.
dna binding protein 16-dec-04 1y9x
(solution NMR)
Title: solution structure of archaeon dna-binding protein ssh10b
Author: q. cui, y. tong, j. wang
Keywords: archaea, dna binding protein
- 1z6k.pdb.
lyase 22-mar-05 1z6k
Mg Se
Title: citrate lyase beta subunit complexed with oxaloacetate and magnesium from m. tuberculosis
Author: c. w. goulding, p. m. bowers, b. segelke, t. lekin, c. y. kim, t. c. terwilliger, d. eisenberg, tb structural genomics consortium (tbsgc)
Keywords: structural genomics, psi, protein structure initiative, tb structural genomics consortium, tbsgc, lyase
- 1zr6.pdb.
oxidoreductase 19-may-05 1zr6
Zn
Title: the crystal structure of an acremonium strictum glucooligosaccharide oxidase reveals a novel flavinylation
Author: c. -h. huang, w. -l. lai, m. -h. lee, y. -c. tsai, s. -h. liaw
Keywords: flavoenzyme, oxidoreductase
- 2a3k.pdb.
signaling protein 24-jun-05 2a3k
Title: crystal structure of the human protein tyrosine phosphatase, ptpn7 (heptp, hematopoietic protein tyrosine phosphatase)
Author: a. barr, a. p. turnbull, s. das, j. eswaran, j. e. debreczeni, e. longmann, c. smee, n. burgess, o. gileadi, m. sundstrom, c. arrowsmith, a. edwards, f. von delft, s. knapp, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc, signaling protein
- 2a5z.pdb.
structural genomics, unknown function 01-jul-05 2a5z
Mg Se
Title: crystal structure of protein of unknown function so2946 from shewanella oneidensis mr-1
Author: b. nocek, l. bigelow, j. abdullah, f. collart, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: hypothetical protein, so2946, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 2ahs.pdb.
hydrolase 28-jul-05 2ahs
Cl Na
Title: crystal structure of the catalytic domain of human tyrosine receptor phosphatase beta
Author: e. ugochukwu, j. eswaran, a. barr, o. gileadi, f. sobott, n. burgess, l. ball, j. bray, f. von delft, j. debreczeni, g. bunkoczi, a. turnbull, s. das, j. weigel, a. edwards, c. arrowsmith, m. sundstrom, s. knapp, structural genomics consortium (sgc)
Keywords: beta, human, structural genomics, structural genomics consortium, sgc, hydrolase
- 2ahu.pdb.
transferase 28-jul-05 2ahu
Se
Title: crystal structure of acyl-coa transferase (ydif) apoenzyme from escherichia coli o157:h7.
Author: e. s. rangarajan, y. li, e. ajamian, p. iannuzzi, s. d. kernaghan, m. e. fraser, m. cygler, a. matte, montreal-kingston bacterial structural genomics initiative (bsgi)
Keywords: coa transferase, glutamyl thioester, structural genomics, montreal-kingston bacterial structural genomics initiative, bsgi
- 2ahv.pdb.
transferase 28-jul-05 2ahv
Title: crystal structure of acyl-coa transferase from e. coli o157:h7 (ydif)-thioester complex with coa- 1
Author: e. s. rangarajan, y. li, e. ajamian, p. iannuzzi, s. d. kernaghan, m. e. fraser, m. cygler, a. matte, montreal-kingston bacterial structural genomics initiative (bsgi)
Keywords: coa transferase, glutamyl thioester, structural genomics, montreal-kingston bacterial structural genomics initiative, bsgi
- 2ahw.pdb.
transferase 28-jul-05 2ahw
Title: crystal structure of acyl-coa transferase from e. coli o157:h7 (ydif)-thioester complex with coa- 2
Author: e. s. rangarajan, y. li, e. ajamian, p. iannuzzi, s. d. kernaghan, m. e. fraser, m. cylger, a. matte, montreal-kingston bacterial structural genomics initiative (bsgi)
Keywords: coa transferase, glutamyl thioester, structural genomics, montreal-kingston bacterial structural genomics initiative, bsgi
- 2aj2.pdb.
unknown function 01-aug-05 2aj2
Se
Title: x-ray crystal structure of protein vc0467 from vibrio cholerae. northeast structural genomics consortium target vcr8.
Author: a. p. kuzin, m. abashidze, s. m. vorobiev, t. acton, r. xiao, k. conover, l. -c. ma, r. kellie, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: nesg, vcr8, q9kup8, structural genomics, psi, protein structure initiative, northeast structural genomics consortium, unknown function
- 2av6.pdb.
transferase 29-aug-05 2av6
Title: x-ray studies on maltodextrin phosphorylase complexes: recognition of substrates and cathalitic mechanism of phosphorylase family
Author: s. geremia, m. campagnolo
Keywords: carbohydrate recognition, phosphorylase mechanism, ternary complexes with natural and inhibitory substrates, transferase
- 2avg.pdb.
structural protein 30-aug-05 2avg
(solution NMR)
Title: nmr structure of cc1 domain from human cardiac myosin binding protein c
Author: a. ababou, m. gautel, m. pfuhl
Keywords: structural protein
- 2aw3.pdb.
transferase 31-aug-05 2aw3
Title: x-ray studies on maltodextrin phosphorylase complexes: recognition of substrates and cathalitic mechanism of phosphorylase family
Author: s. geremia, m. campagnolo
Keywords: carbohydrate recognition, phosphorylase mechanism, ternary complexes with natural and inhibitory substrates, transferase
- 2axn.pdb.
transferase, hydrolase 05-sep-05 2axn
Title: crystal structure of the human inducible form 6- phosphofructo-2-kinase/fructose-2,6-bisphosphatase
Author: s. g. kim, n. p. manes, m. r. el-maghrabi, y. h. lee
Keywords: edta complex, transferase, hydrolase
- 2ayw.pdb.
hydrolase 09-sep-05 2ayw
Ca
Title: crystal structure of the complex formed between trypsin and a designed synthetic highly potent inhibitor in the presence of benzamidine at 0.97 a resolution
Author: m. sherawat, p. kaur, m. perbandt, c. betzel, w. a. slusarchyk, g. s. bisacchi, c. chang, b. l. jacobson, h. m. einspahr, t. p. singh
Keywords: benzamidine, inhibitor, crystal structure, hydrolase
- 2azd.pdb.
transferase 10-sep-05 2azd
V
Title: x-ray studies on maltodextrin phosphorylase (malp) complexes: recognition of substrates and catalytic mechanism of phosphorylase family
Author: s. geremia, m. campagnolo
Keywords: carbohydrate recognition, phosphorylase mechanism, ternary complexes with natural and inhibitory substrates, transferase
- 2b1b.pdb.
dna 15-sep-05 2b1b
Mg
Title: 5'-d(*gp*cp*gp*tp*gp*gp*gp*cp*ap*c)-3' zif268 binding site
Author: h. m. berman, a. a. napoli
Keywords: a form dna, protein-dna recognition
- 2b1c.pdb.
dna 15-sep-05 2b1c
Mg
Title: 5'-d(*gp*cp*gp*tp*gp*gp*gp*ap*cp*c)-3' zif268 binding site
Author: h. m. berman, a. a. napoli
Keywords: a form dna, protein-dna recognition
- 2b1d.pdb.
dna 15-sep-05 2b1d
Co Mg
Title: 5'-d(*gp*cp*ap*gp*ap*cp*gp*tp*cp*tp*gp*c)-3' methionine repressor binding site
Author: h. m. berman, j. w. locasale, a. a. napoli
Keywords: protein-dna recognition
- 2b49.pdb.
hydrolase 23-sep-05 2b49
Title: crystal structure of the catalytic domain of protein tyrosine phosphatase, non-receptor type 3
Author: e. ugochukwu, c. arrowsmith, a. barr, g. bunkoczi, s. das, j. debreczeni, a. edwards, j. eswaran, s. knapp, m. sundstrom, a. turnbull, f. von delft, j. weigelt, structural genomics consortium (sgc)
Keywords: non-receptor type, human, structural genomics, structural genomics consortium, sgc, hydrolase
- 2bdg.pdb.
hydrolase 20-oct-05 2bdg
Cl Na Ni
Title: human kallikrein 4 complex with nickel and p- aminobenzamidine
Author: m. debela, w. bode, p. goettig, structural proteomics in europe (spine)
Keywords: s1 subsite, 70-80 loop, structural proteomics in europe, spine, structural genomics, hydrolase
- 2bdh.pdb.
hydrolase 20-oct-05 2bdh
Zn
Title: human kallikrein 4 complex with zinc and p-aminobenzamidine
Author: m. debela, w. bode, p. goettig, structural proteomics in europe (spine)
Keywords: s1 subsite, 70-80 loop, structural proteomics in europe, spine, structural genomics, hydrolase
- 2bdi.pdb.
hydrolase 20-oct-05 2bdi
Co
Title: human kallikrein 4 complex with cobalt and p- aminobenzamidine
Author: m. debela, w. bode, p. goettig, structural proteomics in europe (spine)
Keywords: s1 subsite, 70-80 loop, structural proteomics in europe, spine, structural genomics, hydrolase
- 2be9.pdb.
transferase 23-oct-05 2be9
Zn
Title: crystal structure of the ctp-liganded (t-state) aspartate transcarbamoylase from the extremely thermophilic archaeon sulfolobus acidocaldarius
Author: d. de vos, s. n. savvides, j. j. van beeumen
Keywords: hyperthermophilic, temperature, transferase, allosteric, holoenzyme, ctp complex
- 2d1h.pdb.
transcription 22-aug-05 2d1h
Se
Title: crystal structure of st1889 protein from thermoacidophilic archaeon sulfolobus tokodaii
Author: a. shinkai, s. sekine, t. terada, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: transcription
- 2d3y.pdb.
hydrolase 04-oct-05 2d3y
Fe
Title: crystal structure of uracil-dna glycosylase from thermus thermophilus hb8
Author: h. kosaka, n. nakagawa, r. masui, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
Keywords: rsgi, hydrolase
- 2dbq.pdb.
oxidoreductase 16-dec-05 2dbq
Se
Title: crystal structure of glyoxylate reductase (ph0597) from pyrococcus horikoshii ot3, complexed with nadp (i41)
Author: s. yoshikawa, r. arai, y. kinoshita, t. uchikubo-kamo, r. akasaka, t. terada, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: d-3-phosphoglycerate dehydrogenase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, oxidoreductase
- 2dbr.pdb.
oxidoreductase 16-dec-05 2dbr
Title: crystal structure of glyoxylate reductase (ph0597) from pyrococcus horikoshii ot3, complexed with nadp (p1)
Author: s. yoshikawa, r. arai, y. kinoshita, t. uchikubo-kamo, r. akasaka, t. terada, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: d-3-phosphoglycerate dehydrogenase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, oxidoreductase
- 2dbz.pdb.
oxidoreductase 16-dec-05 2dbz
Title: crystal structure of glyoxylate reductase (ph0597) from pyrococcus horikoshii ot3, complexed with nadp (p61)
Author: s. yoshikawa, r. arai, y. kinoshita, t. uchikubo-kamo, r. akasaka, t. terada, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: d-3-phosphoglycerate dehydrogenase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, oxidoreductase
- 2dc1.pdb.
oxidoreductase 19-dec-05 2dc1
Title: crystal structure of l-aspartate dehydrogenase from hyperthermophilic archaeon archaeoglobus fulgidus
Author: k. yoneda, h. sakuraba, h. tsuge, t. ohshima
Keywords: nad, oxidoreductase
- 2ddg.pdb.
hydrolase/dna 28-jan-06 2ddg
Fe
Title: crystal structure of uracil-dna glycosylase in complex with ap:g containing dna
Author: h. kosaka, n. nakagawa, r. masui, j. hoseki, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
Keywords: riken structural genomics/proteomics initiative, rsgi, hydrolase/dna complex
- 2dem.pdb.
hydrolase/dna 13-feb-06 2dem
Fe
Title: crystal structure of uracil-dna glycosylase in complex with ap:a containing dna
Author: h. kosaka, n. nakagawa, r. masui, j. hoseki, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
Keywords: rsgi, hydrolase/dna complex
- 2dst.pdb.
structural genomics, unknown function 06-jul-06 2dst
Title: crystal structure analysis of tt1977
Author: y. xie, s. kishishita, k. murayama, m. shirouzu, l. chen, z. j. liu, b. c. wang, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, unknown function
- 2du3.pdb.
ligase/rna 20-jul-06 2du3
Title: crystal structure of archaeoglobus fulgidus o-phosphoseryl- trna synthetase complexed with trnacys and o-phosphoserine
Author: r. fukunaga
Keywords: ligase/rna complex
- 2du4.pdb.
ligase/rna 20-jul-06 2du4
Title: crystal structure of archaeoglobus fulgidus o-phosphoseryl- trna synthetase complexed with trnacys
Author: r. fukunaga
Keywords: ligase/rna complex
- 2du5.pdb.
ligase/rna 20-jul-06 2du5
Title: crystal structure of archaeoglobus fulgidus o-phosphoseryl- trna synthetase e418n/e420n mutant complexed with trnaopal and o-phosphoserine ("opal complex")
Author: r. fukunaga
Keywords: ligase/rna complex
- 2du6.pdb.
ligase/rna 20-jul-06 2du6
Title: crystal structure of archaeoglobus fulgidus o-phosphoseryl- trna synthetase e418n/e420n mutant complexed with trnaamber and o-phosphoserine ("amber complex")
Author: r. fukunaga
Keywords: ligase/rna complex
- 2du7.pdb.
ligase 20-jul-06 2du7
Title: crystal structure of methanococcus jannacshii o- phosphoseryl-trna synthetase
Author: r. fukunaga, riken structural genomics/proteomics initiative (rsgi)
Keywords: ligase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dx7.pdb.
isomerase 24-aug-06 2dx7
Title: crystal structure of pyrococcus horikoshii ot3 aspartate racemase complex with citric acid
Author: a. ohtaki, t. arakawa, r. iizuka, m. odaka, m. yohda
Keywords: isomerase
- 2dxm.pdb.
oxygen storage/transport 28-aug-06 2dxm
D Fe
(neutron diffraction)
Title: neutron structure analysis of deoxy human hemoglobin
Author: y. morimoto
Keywords: oxygen storage/transport complex
- 2e67.pdb.
structural genomics, unknown function 26-dec-06 2e67
Mg
Title: crystal structure of the hypothetical protein tthb029 from thermus thermophilus hb8
Author: t. imagawa, riken structural genomics/proteomics initiative (rsgi)
Keywords: hypothetical protein, nppsfa, national project on protein structural and functional analyses, structural genomics, unknown function, riken structural genomics/proteomics initiative, rsgi
- 2ehq.pdb.
oxidoreductase 07-mar-07 2ehq
Na
Title: crystal analysis of 1-pyrroline-5-carboxylate dehydrogenase from thermus with bound nadp
Author: e. inagaki, k. sakamoto, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, oxidoreductase
- 2ers.pdb.
signaling protein 25-oct-05 2ers
(solution NMR)
Title: solution structure of the interleukin-15 receptor sushi domain
Author: i. lorenzen, a. j. dingley, j. grotzinger
Keywords: signaling protein
- 2erv.pdb.
membrane protein 25-oct-05 2erv
Ca
Title: crystal structure of the outer membrane enzyme pagl
Author: l. rutten, j. geurtsen, w. lambert, j. j. smolenaers, a. m. bonvin, p. van der ley, m. r. egmond, p. gros, j. tommassen
Keywords: outer membrane, enzyme, hydrolase, lipopolysaccharide, membrane protein
- 2esc.pdb.
signaling protein 26-oct-05 2esc
Title: crystal structure of a 40 kda protective signalling protein from bovine (spc-40) at 2.1 a resolution
Author: j. kumar, a. s. ethayathulla, d. b. srivastav, s. sharma, a. srinivasan, t. p. singh
Keywords: crystal structure,, signaling protein
- 2exf.pdb.
viral protein/dna 08-nov-05 2exf
Zn
(solution NMR)
Title: solution structure of the hiv-1 nucleocapsid (ncp7(12-55)) complexed with the dna (-) primer binding site
Author: s. bourbigot, s. bouaziz, n. morellet
Keywords: stem-loop, bulge, zinc-finger, viral protein/dna complex
- 2fsu.pdb.
structural genomics, unknown function 23-jan-06 2fsu
Na Se
Title: crystal structure of the phnh protein from escherichia coli
Author: m. a. adams, y. luo, d. l. zechel, z. jia, montreal-kingston bacterial structural genomics initiative (bsgi)
Keywords: phnh, phosphonate metabolism, structural genomics, montreal-kingston bacterial structural genomics initiative, bsgi, unknown function
- 2g1z.pdb.
dna 15-feb-06 2g1z
Title: x-ray structure of the oligonucleotide sequence d(aaattt)
Author: n. valls, a. santaolalla, j. l. campos, j. a. subirana
Keywords: adenine, thymine, dna
- 2g62.pdb.
hydrolase activator 24-feb-06 2g62
Title: crystal structure of human ptpa
Author: a. magnusdottir, p. stenmark, c. arrowsmith, h. berglund, r. collins, a. edwards, m. ehn, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, m. hogbom, l. holmberg schiavone, t. kotenyova, p. nilsson-ehle, t. nyman, d. ogg, c. persson, j. sagemark, m. sundstrom, a. g. thorsell, s. van den berg, k. wallden, j. weigelt, p. nordlund
Keywords: mgc2184, pp2a, pr53, ptpa, protein phosphatase 2a, regulatory subunit b' (pr 53), hydrolase activator
- 2g73.pdb.
isomerase 27-feb-06 2g73
Mg Mn
Title: y104f mutant type 1 ipp isomerase complex with eipp
Author: j. de ruyck, j. wouters
Keywords: isomerase
- 2g74.pdb.
isomerase 27-feb-06 2g74
Mg Mn
Title: y104f mutant of type 1 isopentenylpyrophosphate- dimethylallylpyrophosphate isomerase
Author: j. de ruyck, j. wouters
Keywords: isomerase
- 2g9z.pdb.
transferase 07-mar-06 2g9z
Cl Mg
Title: thiamin pyrophosphokinase from candida albicans
Author: c. abergel, s. santini, v. monchois, t. rousselle, j. m. claverie, bacterial targets at igs-cnrs, france (bigs)
Keywords: tpk, thiamin pyrophosphokinase, structural genomics, profun, bacterial targets at igs-cnrs, france, bigs, transferase
- 2gjt.pdb.
hydrolase 31-mar-06 2gjt
Cl
Title: crystal structure of the human receptor phosphatase ptpro
Author: a. barr, e. ugochukwu, j. eswaran, s. das, f. niesen, p. savitsky, a. turnbull, m. sundstrom, c. arrowsmith, a. edwards, j. weigelt, f. von delft, e. papagrigoriou, s. knapp, structural genomics consortium (sgc)
Keywords: ptpro, glepp1, ptpu2, structural genomics, structural genomics consortium, sgc, hydrolase
- 2gsx.pdb.
immune system 27-apr-06 2gsx
(solution scattering)
Title: complement receptor type 2
Author: h. e. gilbert, r. asokan, v. m. holers, s. j. perkins
Keywords: scr domain, ccp domain, sushi domain, immune system
- 2gx0.pdb.
luminescent protein 08-may-06 2gx0
Title: crystal structural and functional analysis of gfp-like fluorescent protein
Author: k. y. hwang, k. -h. nam, s. -y. park, k. sugiyama
Keywords: b-can, photoswitching, luminescent protein
- 2gx2.pdb.
luminescent protein 08-may-06 2gx2
Mg
Title: crystal structural and functional analysis of gfp-like fluorescent protein dronpa
Author: k. y. hwang, k. -h. nam, s. -y. park, k. sugiyama
Keywords: fluorescence protein, luminescent protein
- 2h2q.pdb.
oxidoreductase, transferase 19-may-06 2h2q
Title: crystal structure of trypanosoma cruzi dihydrofolate reductase-thymidylate synthase
Author: o. senkovich, n. schormann, d. chattopadhyay
Keywords: oxidoreductase, transferase
- 2h41.pdb.
cell adhesion, structural protein 23-may-06 2h41
(solution NMR)
Title: solution structure of the second type iii domain of human fibronectin: minimized average structure
Author: i. vakonakis, i. d. campbell
Keywords: cell adhesion, structural protein
- 2h45.pdb.
cell adhesion, structural protein 23-may-06 2h45
(solution NMR)
Title: solution structure of the second type iii domain of human fibronectin: ensemble of 25 structures
Author: i. vakonakis, i. d. campbell
Keywords: cell adhesion, structural protein
- 2ha1.pdb.
cell adhesion, structural protein 12-jun-06 2ha1
(solution NMR)
Title: complex of the first and second type iii domains of human fibronectin in solution
Author: i. vakonakis, i. d. campbell
Keywords: protein-protein complex, rigid body docking, cell adhesion, structural protein
- 2hc1.pdb.
hydrolase 14-jun-06 2hc1
Cl
Title: engineered catalytic domain of protein tyrosine phosphatase hptpbeta.
Author: a. g. evdokimov, m. pokross, r. walter, m. mekel
Keywords: wpd-loop, sulfamic acid, phosphatase, inhibitor, drug design, hydrolase
- 2hc2.pdb.
hydrolase 15-jun-06 2hc2
Mg Na
Title: engineered protein tyrosine phosphatase beta catalytic domain
Author: a. g. evdokimov, m. pokross, r. walter, m. mekel
Keywords: wpd-loop, sulfamic acid, phosphatase, inhibitor, drug design, hydrolase
- 2hfd.pdb.
structural genomics, unknown function 23-jun-06 2hfd
(solution NMR)
Title: nmr structure of protein hydrogenase-1 operon protein hyae from escherichia coli: northeast structural genomics consortium target er415
Author: k. k. singarapu, g. liu, a. eletsky, d. parish, h. s. atreya, d. xu, h. janjua, k. cunningham, l. c. ma, r xiao, j. liu, m. baran, g. v. t. swapna, t. acton, b. rost, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
Keywords: nesgc, alfa-beta, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, unknown function
- 2hh9.pdb.
transferase 28-jun-06 2hh9
Mg
Title: thiamin pyrophosphokinase from candida albicans
Author: c. abergel, s. santini, v. monchois, t. rousselle, j. m. claverie, bacterial targets at igs-cnrs, france (bigs)
Keywords: tpk, thiamin pyrophosphokinase, structural genomics, bacterial targets at igs-cnrs, france, bigs, transferase
- 2hjf.pdb.
metal transport 30-jun-06 2hjf
K
Title: potassium channel kcsa-fab complex with tetrabutylammonium (tba)
Author: j. d. faraldo-gomez, e. kutluay, v. jogini, y. zhao, l. heginbotham, b. roux
Keywords: ion transport, metal transport
- 2hkf.pdb.
immune system 04-jul-06 2hkf
Title: crystal structure of the complex fab m75- peptide
Author: v. kral, p. mader, r. stouracova, m. fabry, m. horejsi, j. brynda
Keywords: fab fragment, immune system
- 2hkh.pdb.
immune system 04-jul-06 2hkh
Title: crystal structure of the fab m75
Author: v. kral, p. mader, r. stouracova, m. fabry, j. sedlacek, j. brynda
Keywords: fab fragment, immune system
- 2hqm.pdb.
oxidoreductase 19-jul-06 2hqm
Title: crystal structure of glutathione reductase glr1 from the yeast saccharomyces cerevisiae
Author: j. yu, c. z. zhou
Keywords: oxidoreductase
- 2hxc.pdb.
oxidoreductase 03-aug-06 2hxc
Title: crystal structure of the benzylamine complex of aromatic amine dehydrogenase in n-semiquinone form
Author: a. roujeinikova, d. leys
Keywords: oxidoreductase
- 2i0r.pdb.
oxidoreductase 11-aug-06 2i0r
Title: crystal structure of aromatic amine dehydrogenase ttq- formamide adduct
Author: a. roujeinikova, d. leys
Keywords: carbinolamine oxidation, oxidoreductase
- 2i0s.pdb.
oxidoreductase 11-aug-06 2i0s
Title: crystal structure of aromatic amine dehydrogenase ttq- phenylacetaldehyde adduct
Author: a. roujeinikova, d. leys
Keywords: carbinolamine oxidation, oxidoreductase
- 2i0t.pdb.
oxidoreductase 11-aug-06 2i0t
Title: crystal structure of phenylacetaldehyde derived r- carbinolamine adduct of aromatic amine dehydrogenase
Author: a. roujeinikova, d. leys
Keywords: carbinolamine oxidation, oxidoreductase
- 2i75.pdb.
hydrolase 30-aug-06 2i75
Title: crystal structure of human protein tyrosine phosphatase n4 (ptpn4)
Author: e. ugochukwu, a. barr, p. savitsky, n. burgess, s. das, a. turnbull, f. von delft, m. sundstrom, a. edwards, c. arrowsmith, j. weigelt, s. knapp, structural genomics consortium (sgc)
Keywords: ptp, tyrosine phosphatase, meg-1, structural genomics, structural genomics consortium, sgc, hydrolase
- 2i7c.pdb.
transferase 30-aug-06 2i7c
Title: the crystal structure of spermidine synthase from p. falciparum in complex with adodato
Author: w. qiu, a. dong, h. ren, h. wu, g. wasney, m. vedadi, j. lew, i. kozieradski, a. m. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, a. n. plotnikov, a. bochkarev, r. hui, structural genomics consortium (sgc)
Keywords: spermidine synthase, structural genomics consortium, sgc
- 2id7.pdb.
signaling protein 14-sep-06 2id7
Title: 1.75 a structure of t87i phosphono-chey
Author: c. j. halkides, r. m. haas, k. a. mcadams, e. s. casper, b. d. santarsiero, a. d. mesecar
Keywords: signaling protein
- 2id9.pdb.
signaling protein 14-sep-06 2id9
Title: 1.85 a structure of t87i/y106w phosphono-chey
Author: c. j. halkides, r. m. haas, k. a. mcadams, e. s. casper, b. d. santarsiero, a. d. mesecar
Keywords: signaling protein
- 2idm.pdb.
signaling protein 15-sep-06 2idm
Title: 2.00 a structure of t87i/y106w phosphono-chey
Author: c. j. halkides, r. m. haas, k. a. mcadams, e. s. casper, b. d. santarsiero, a. d. mesecar
Keywords: signaling protein
- 2iiz.pdb.
structural genomics/unknown function 28-sep-06 2iiz
Na Fe Se
Title: crystal structure of putative melanin biosynthesis protein tyra with bound heme (np_716371.1) from shewanella oneidensis at 2.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative melanin biosynthesis protein tyra, structural genomics, psi-2, protein structure initiative, joint center for structural genomics, jcsg, structural genomics/unknown function complex
- 2ij2.pdb.
oxidoreductase 29-sep-06 2ij2
Fe
Title: atomic structure of the heme domain of flavocytochrome p450- bm3
Author: h. s. helen, d. leys
Keywords: p450bm3, monoxygenase, heme binding protein, atomic resolution, oxidoreductase
- 2ij3.pdb.
oxidoreductase 29-sep-06 2ij3
Fe
Title: structure of the a264h mutant of cytochrome p450 bm3
Author: h. s. toogood, d. leys
Keywords: histidine ligation, cytochrome p450, p450 bm3, oxidoreductase
- 2ij4.pdb.
oxidoreductase 29-sep-06 2ij4
Fe
Title: structure of the a264k mutant of cytochrome p450 bm3
Author: h. s. toogood, d. leys
Keywords: cytochrome p450, p450 bm3, oxidoreductase
- 2is9.pdb.
transcription 16-oct-06 2is9
Cl Pt
Title: structure of yeast dcn-1
Author: x. yang, j. zhou, l. sun, z. wei, j. gao, w. gong, r. m. xu, z. rao, y. liu
Keywords: dcn1, transcription
- 2j0q.pdb.
hydrolase 04-aug-06 2j0q
Mg
Title: the crystal structure of the exon junction complex at 3.2 a resolution
Author: f. bono, j. ebert, e. lorentzen, e. conti
Keywords: rna-binding, coiled coil, ejc, helicase, hydrolase, transport, acetylation
- 2j1m.pdb.
oxidoreductase 14-aug-06 2j1m
Zn Fe
Title: p450 bm3 heme domain in complex with dmso
Author: j. kuper, w. tuck-seng, d. roccatano, m. wilmanns, u. schwaneberg
Keywords: dmso-inhibition, p450, iron, heme, organic solvent, flavoprotein, monooxygenase, metal-binding, membrane
- 2j4e.pdb.
hydrolase 29-aug-06 2j4e
Mg
Title: the itp complex of human inosine triphosphatase
Author: p. stenmark, p. kursula, c. arrowsmith, h. berglund, r. busam, r. collins, a. edwards, m. ehn, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg schiavone, m. hogbom, t. kotenyova, r. landry, p. loppnau, a. magnusdottir, p. nilsson-ehle, t. nyman, d. ogg, c. persson, j. sagemark, m. sundstrom, j. uppenberg, a. g. thorsell, h. schuler, s. van den berg, k. wallden, j. weigelt, p. nordlund
Keywords: itp, imp, hydrolase, disease mutation, inosine triphosphate pyrophosphohydrolase, inosine triphosphatase deficiency
- 2j58.pdb.
membrane protein 12-sep-06 2j58
Se
Title: the structure of wza
Author: c. dong, j. h. naismith
Keywords: membrane protein
- 2j67.pdb.
receptor 26-sep-06 2j67
Title: the tir domain of human toll-like receptor 10 (tlr10)
Author: p. stenmark, d. ogg, c. arrowsmith, h. berglund, r. busam, r. collins, a. edwards, u. b. ericsson, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg schiavone, m. hogbom, i. johansson, t. karlberg, t. kotenyova, a. magnusdottir, m. e. nilsson, p. nilsson-ehle, t. nyman, c. persson, j. sagemark, m. sundstrom, j. uppenberg, a. g. thorsell, s. van den berg, k. wallden, j. weigelt, m. welin, p. nordlund
Keywords: il-1, toll, tlr10, membrane, receptor, inflammatory response, toll-like receptor 10, innate immunity, immune response, leucine-rich repeat, polymorphism, glycoprotein, transmembrane
- 2j7v.pdb.
hydrolase 17-oct-06 2j7v
Title: structure of pbp-a
Author: c. evrard, j. p. declercq
Keywords: lactamase, dd-peptidase, thioesterase, hydrolase
- 2j8y.pdb.
hydrolase 31-oct-06 2j8y
Title: structure of pbp-a acyl-enzyme complex with penicillin-g
Author: c. evrard, j. p. declercq
Keywords: hydrolase, lactamase, thioesterase, dd-peptidase
- 2j9o.pdb.
hydrolase 14-nov-06 2j9o
Title: structure of pbp-a, l158e mutant
Author: c. evrard, j. p. declercq
Keywords: hydrolase, lactamase, thioesterase, dd-peptidase
- 2j9u.pdb.
protein transport 16-nov-06 2j9u
Zn
Title: 2 angstrom x-ray structure of the yeast escrt-i vps28 c- terminus in complex with the nzf-n domain from escrt-ii
Author: d. j. gill, h. l. teo, j. sun, o. perisic, d. b. veprintsev, s. d. emr, r. l. williams
Keywords: mvb, zinc, chmp, escrt, vps36, vps28, membrane, transport, nzf finger, hiv budding, zinc-finger, metal- binding, protein transport
- 2jab.pdb.
de novo protein 27-nov-06 2jab
Title: a designed ankyrin repeat protein evolved to picomolar affinity to her2
Author: c. zahnd, e. wyler, j. m. schwenk, d. steiner, m. c. lawrence, n. m. mckern, f. pecorari, c. w. ward, t. o. joos, a. pluckthun
Keywords: darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein
- 2jah.pdb.
oxidoreductase 28-nov-06 2jah
Se
Title: biochemical and structural analysis of the clavulanic acid dehydeogenase (cad) from streptomyces clavuligerus
Author: a. k. mackenzie, n. j. kershaw, h. hernandez, c. v. robinson, c. j. schofield, i. andersson
Keywords: lactamase inhibitor, antibiotic biosynthesis, nadph, oxidoreductase, clavulanic acid
- 2jak.pdb.
nuclear protein 29-nov-06 2jak
Title: human pp2a regulatory subunit b56g
Author: a. magnusdottir, p. stenmark, c. arrowsmith, h. berglund, r. busam, r. collins, a. edwards, u. b. ericsson, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg schiavone, m. hogbom, i. johansson, t. karlberg, t. kotenyova, s. lundgren, m. moche, p. nilsson, t. nyman, d. ogg, c. persson, j. sagemark, m. sundstrom, j. uppenberg, m. upsten, a. g. thorsell, s. van den berg, j. weigelt, p. nordlund
Keywords: pp2a, ppp2r5c, phosphorylation, pp2a regulatory subunit, nuclear protein, alternative splicing
- 2jas.pdb.
transferase 30-nov-06 2jas
Mg
Title: structure of deoxyadenosine kinase from m.mycoides with bound datp
Author: m. welin, l. wang, s. eriksson, h. eklund
Keywords: transferase, deoxyribonucleoside kinase
- 2jat.pdb.
transferase 30-nov-06 2jat
Mg
Title: structure of deoxyadenosine kinase from m.mycoides with products dcmp and a flexible dcdp bound
Author: m. welin, l. wang, s. eriksson, h. eklund
Keywords: transferase, deoxyribonucleoside kinase
- 2jb6.pdb.
immune system 03-dec-06 2jb6
Title: fab fragment in complex with small molecule hapten, crystal form-2
Author: r. c. hillig, s. baesler, g. malawski, v. badock, i. bahr, m. schirner, k. licha
Keywords: tsc, fab, hucal, fluorescent dye, immunoglobulin domain, antibody fragment, diagnostic imaging, immune system
- 2jcq.pdb.
sugar-binding protein 03-jan-07 2jcq
Title: the hyaluronan binding domain of murine cd44 in a type a complex with an ha 8-mer
Author: s. banerji, a. j. wright, m. e. m. noble, d. j. mahoney, i. d. campbell, a. j. day, d. g. jackson
Keywords: extracellular matrix, pyrrolidone carboxylic acid, transmembrane, sugar- binding, phosphorylation
- 2jcr.pdb.
sugar-binding protein 03-jan-07 2jcr
Title: the hyaluronan binding domain of murine cd44 in a type b complex with an ha 8-mer
Author: s. banerji, a. j. wright, m. e. m. noble, d. j. mahoney, i. d. campbell, a. j. day, d. g. jackson
Keywords: extracellular matrix, pyrrolidone carboxylic acid, transmembrane, sugar-binding, phosphorylation
- 2jer.pdb.
hydrolase 19-jan-07 2jer
Title: agmatine deiminase of enterococcus faecalis catalyzing its reaction.
Author: s. tavarez, j. l. llacer, v. rubio
Keywords: agmatine deiminase, tetramer, agdi, 5- fold pseudosymmetric structure, agmatine degradation pathway, covalent amidino adduct, agmatine iminohydrolase
- 2jfl.pdb.
transferase 02-feb-07 2jfl
Cl F
Title: crystal structure of human ste20-like kinase ( diphosphorylated form) bound to 5- amino-3-((4-( aminosulfonyl)phenyl)amino)-n-(2,6- difluorophenyl)-1h-1,2, 4-triazole-1-carbothioamide
Author: a. c. w. pike, p. rellos, o. fedorov, t. keates, e. salah, p. savitsky, e. papagrigoriou, g. bunkoczi, f. von delft, c. h. arrowsmith, a. edwards, j. weigelt, m. sundstrom, s. knapp
Keywords: alternative splicing, serine-threonine-protein kinase
- 2jg2.pdb.
transferase 07-feb-07 2jg2
Mg
Title: high resolution structure of spt with plp internal aldimine
Author: b. a. yard, l. g. carter, k. a. johnson, i. m. overton, s. a. mcmahon, m. dorward, h. liu, d. puech, m. oke, g. j. barton, j. h. naismith, d. j. campopiano
Keywords: plp, sspf, transferase, sphingolipid, pyridoxal phosphate, serine palmitoyl transferase
- 2jg6.pdb.
hydrolase 08-feb-07 2jg6
Zn
Title: crystal structure of a 3-methyladenine dna glycosylase i from staphylococcus aureus
Author: x. yan, l. g. carter, h. liu, m. dorward, s. a. mcmahon, k. a. johnson, m. oke, p. coote, j. h. naismith
Keywords: 3-methyladenine-dna-glycosylase-i, hydrolase
- 2jgt.pdb.
transferase 14-feb-07 2jgt
Title: low resolution structure of spt
Author: b. a. yard, l. g. carter, k. a. johnson, i. m. overton, s. a. mcmahon, m. dorward, h. liu, d. puech, m. oke, g. j. barton, j. h. naismith, d. j. campopiano
Keywords: plp, sspf, transferase, sphingolipid, pyridoxal phosphate, serine palmitoyl transferase
- 2jhe.pdb.
transcription 21-feb-07 2jhe
Title: n-terminal domain of tyrr transcription factor (residues 1 - 190)
Author: d. verger, p. d. carr, t. kwok, d. l. ollis
Keywords: aromatic hydrocarbons catabolism, tyrr protein, nucleotide-binding, transcription regulation, activator, repressor, atp-binding, dna-binding, two-component regulatory system
- 2jk7.pdb.
apoptosis 21-aug-08 2jk7
Zn
Title: xiap bir3 bound to a smac mimetic
Author: n. g. saito, j. l. meagher, j. a. stuckey
Keywords: protease inhibitor
- 2jln.pdb.
membrane protein 11-sep-08 2jln
Hg Na
Title: structure of mhp1, a nucleobase-cation-symport-1 family transporter
Author: s. weyand, t. shimamura, s. yajima, s. suzuki, o. mirza, k. krusong, e. p. carpenter, n. g. rutherford, j. m. hadden, j. o'reilly, p. ma, m. saidijam, s. g. patching, r. j. hope, h. t. norbertczak, p. c. j. roach, s. iwata, p. j. f. henderson, a. d. cameron
Keywords: transporter, membrane protein, nucleobase-cation-symport-1 family
- 2jmu.pdb.
hydrolase 05-dec-06 2jmu
(solution NMR)
Title: nmr structure of the mouse thiamine triphosphatase
Author: j. song, j. l. markley, center for eukaryotic structural genomics (cesg)
Keywords: structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg, hydrolase
- 2jn6.pdb.
structural genomics, unknown function 28-dec-06 2jn6
(solution NMR)
Title: solution nmr structure of protein cgl2762 from corynebacterium glutamicum: northeast structural genomics consortium target cgr3
Author: k. k. singarapu, d. k. sukumaran, d. parish, c. x. chen, k. cunningham, r. xiao, g. v. t. swapna, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
Keywords: psi-2, protein structure, structural genomics, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 2jz4.pdb.
structural genomics, unknown function 28-dec-07 2jz4
(solution NMR)
Title: putative 32 kda myrosinase binding protein at3g16450.1 from arabidopsis thaliana
Author: n. takeda, n. sugimori, t. torizawa, t. terauchi, a. m. ono, h. yagi, y. yamaguchi, k. kato, t. ikeya, p. guntert, d. j. aceti, j. l. markley, m. kainosho, center for eukaryotic structural genomics (cesg)
Keywords: at3g16450.1, sail, stereo-array isotope labeling, structural genomics, psi-2, protein structure initiative, center for eukaryotic structural genomics, cesg, unknown function
- 2jzt.pdb.
isomerase 16-jan-08 2jzt
(solution NMR)
Title: solution nmr structure of q8zp25_salty from salmonella typhimurium. northeast structural genomics consortium target str70
Author: d. parish, g. liu, y. shen, c. ho, k. cunningham, r. xiao, g. v. t. swapna, t. acton, s. bansal, j. h. prestegard, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
Keywords: str70, structural genomics, putative [nife] hydrogenase assembly, chaperone, isomerase, psi-2, protein structure initiative, northeast structural genomics consortium
- 2k1e.pdb.
membrane protein 29-feb-08 2k1e
(solution NMR)
Title: nmr studies of a channel protein without membranes: structure and dynamics of water-solubilized kcsa
Author: d. ma, y. xu, t. tillman, p. tang, e. meirovitch, r. eckenhoff, a. carnini
Keywords: ion transport, ionic channel, membrane, transmembrane, transport, voltage-gated channel, membrane protein
- 2k1g.pdb.
lipoprotein 03-mar-08 2k1g
(solution NMR)
Title: solution nmr structure of lipoprotein spr from escherichia coli k12. northeast structural genomics target er541-37-162
Author: j. m. aramini, p. rossi, l. zhao, m. jiang, m. maglaqui, r. xiao, j. liu, m. c. baran, g. v. t. swapna, y. j. huang, t. b. acton, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: nesg
- 2k27.pdb.
transcription regulator 26-mar-08 2k27
(solution NMR)
Title: solution structure of human pax8 paired box domain
Author: l. codutti, g. esposito, a. corazza, f. fogolari, g. tell, c. vascotto, h. van ingen, r. boelens, p. viglino, f. quadrifoglio
Keywords: polymorphism, transcription, transcription regulation, transcription regulator
- 2k2n.pdb.
transferase 04-apr-08 2k2n
(solution NMR)
Title: solution structure of a cyanobacterial phytochrome gaf domain in the red light-absorbing ground state
Author: c. c. cornilescu, g. cornilescu, a. t. ulijasz, r. d. vierstra, j. l. markley
Keywords: gaf domain, phycocyanobilin, pcb, bacteriophytochrome, cyanobacterial phytochrome, kinase, phosphoprotein, transferase
- 2k36.pdb.
viral protein 22-apr-08 2k36
(solution NMR)
Title: structure ensemble backbone and side-chain 1h, 13c, and 15n chemical shift assignments, 1h-15n rdcs and 1h-1h noe restraints for protein k7 from the vaccinia virus
Author: a. p. kalverda, g. s. thompson, a. vogel, m. schr der, a. g. bowie, a. r. khan, s. w. homans
Keywords: viral protein
- 2k3h.pdb.
protein transport 08-may-08 2k3h
Ca
(solution NMR)
Title: structural determinants for ca2+ and pip2 binding by the c2a domain of rabphilin-3a
Author: n. coudevylle, p. montaville, a. leonov, m. zweckstetter, s. becker
Keywords: c2 domain, calcium, tama mechanism, cell junction, metal-binding, phosphoprotein, protein transport, synapse, transport, zinc, zinc-finger
- 2k3x.pdb.
transcription regulator 19-may-08 2k3x
(solution NMR)
Title: solution structure of eaf3 chromo barrel domain
Author: g. mer, c. xu
Keywords: transcription regulator
- 2k3y.pdb.
transcription regulator 19-may-08 2k3y
(solution NMR)
Title: solution structure of eaf3 chromo barrel domain bound to histone h3 with a dimethyllysine analog h3k36me2
Author: g. mer, c. xu
Keywords: transcription regulation, chromosomal protein, dna-binding, transcription regulator
- 2k4a.pdb.
protein transport 02-jun-08 2k4a
(solution NMR)
Title: fgf-1-c2a binary complex structure: a key component in the fibroblast growthfactor non-classical pathway
Author: c. yu, s. k. mohan
Keywords: developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, protein transport
- 2k7g.pdb.
plant protein 10-aug-08 2k7g
(solution NMR)
Title: solution structure of varv f
Author: c. k. wang
Keywords: cystine knot, knottin, plant defense, plant protein
- 2k7l.pdb.
transcription 13-aug-08 2k7l
(solution NMR)
Title: nmr structure of a complex formed by the c-terminal domain of human rap74 and a phosphorylated peptide from the central domain of the fcp1
Author: a. yang, k. l. abbott, a. desjardins, p. di lello, j. g. omichinski, p. legault
Keywords: fcp1, phosphorylation, ck2, rap74, nucleus, phosphoprotein, polymorphism, transcription, transcription regulation
- 2k95.pdb.
rna 29-sep-08 2k95
(solution NMR)
Title: solution structure of the wild-type p2b-p3 pseudoknot of human telomerase rna
Author: n. -k. kim, q. zhang, j. zhou, c. a. theimer, r. d. peterson, j. feigon
Keywords: rna, pseudoknot, triple helix, bulge, rdc
- 2k96.pdb.
rna 29-sep-08 2k96
(solution NMR)
Title: solution structure of the rdc-refined p2b-p3 pseudoknot from human telomerase rna (delta u177)
Author: n. -k. kim, q. zhang, j. zhou, c. a. theimer, r. d. peterson, j. feigon
Keywords: rna, triple helix, rdc
- 2k9a.pdb.
protein binding 06-oct-08 2k9a
(solution NMR)
Title: the solution structure of the arl2 effector, bart
Author: l. k. bailey, l. j. campbell, k. a. evetts, k. littlefield, e. rajendra, d. nietlispach, d. owen, h. r. mott
Keywords: effector, nmr, small g protein, alternative splicing, cytoplasm, mitochondrion, phosphoprotein, protein binding
- 2k9k.pdb.
metal transport 15-oct-08 2k9k
(solution NMR)
Title: molecular characterization of the tonb2 protein from vibrio anguillarum
Author: c. s. lopez, r. s. peacock, j. h. crosa, h. j. vogel
Keywords: metal transport
- 2k9z.pdb.
structural genomics, unknown function 28-oct-08 2k9z
(solution NMR)
Title: nmr structure of the protein tm1112
Author: b. mohanty, b. pedrini, p. serrano, m. geralt, r. horst, i. wilson, k. wuthrich, joint center for structural genomics (jcsg)
Keywords: tm1112, structural genomics, psi-2, protein structure initiative, joint center for structural genomics, jcsg, unknown function
- 2ka3.pdb.
structural protein 30-oct-08 2ka3
(solution NMR)
Title: structure of emilin-1 c1q-like domain
Author: g. verdone, a. corazza, s. a. colebrooke, d. o. cicero, t. eliseo, j. boyd, r. doliana, f. fogolari, p. viglino, a. colombatti, i. d. campbell, g. esposito
Keywords: c1q-like domain, homotrimeric protein complex, beta-sandwich, structural protein, cell adhesion, extracellular matrix
- 2kad.pdb.
membrane protein 04-nov-08 2kad
(solid-state NMR)
Title: magic-angle-spinning solid-state nmr structure of influenza a m2 transmembrane domain
Author: m. hong, s. d. cady, t. v. mishanina
Keywords: transport, virion, membrane protein
- 2kan.pdb.
structural genomics, unknown function 11-nov-08 2kan
(solution NMR)
Title: solution nmr structure of ubiquitin-like domain of arabidopsis thaliana protein at2g32350. northeast structural genomics consortium target ar3433a
Author: a. eletsky, j. l. mills, d. sukumaran, j. hua, r. shastry, m. jiang, c. ciccosanti, r. xiao, j. liu, j. k. everret, g. v. t. swapna, t. b. acton, b. rost, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
Keywords: alpha+beta, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 2kb8.pdb.
hormone 21-nov-08 2kb8
(solution NMR)
Title: the dynamic alpha-helix structure of micelle-bound human amylin.
Author: s. m. patil, s. xu, s. r. sheftic, a. t. alexandrescu
Keywords: amyloid, micelle-bound, type ii diabetes, hormone, amidation, cleavage on pair of basic residues, polymorphism, secreted
- 2kbz.pdb.
viral protein 12-dec-08 2kbz
(solution NMR)
Title: nmr structure of protein gp15 of bacteriophage spp1
Author: m. gallopin, b. gilquin, s. zinn-justin
Keywords: viral protein
- 2kca.pdb.
virus 18-dec-08 2kca
(solution NMR)
Title: gp16
Author: m. gallopin, b. gilquin, s. zinn-justin
Keywords: virus
- 2kcw.pdb.
transferase 30-dec-08 2kcw
(solution NMR)
Title: solution structure of apo-form yjab from escherichia coli
Author: j. lu, x. wang, c. jin
Keywords: acyltransferase, transferase
- 2kfx.pdb.
metal binding protein 28-feb-09 2kfx
Cl Ca
(solution NMR)
Title: structure of the n-terminal domain of human cardiac troponin c bound to calcium ion and to the inhibitor w7
Author: r. m. b. hoffman, b. d. sykes
Keywords: striated muscle, cardiac, troponin, w7, cardiotonic drugs, acetylation, calcium, cardiomyopathy, disease mutation, muscle protein, polymorphism, metal binding protein
- 2kg6.pdb.
biosynthetic protein 06-mar-09 2kg6
(solution NMR)
Title: solution structure of the acetyl actinorhodin acyl carrier protein from streptomyces coelicolor
Author: m. p. crump, s. e. evans, p. eliza, w. christopher
Keywords: acetyl, acylated, polyketide, actinorhodin, antibiotic biosynthesis, phosphopantetheine, biosynthetic protein
- 2kg8.pdb.
biosynthetic protein 06-mar-09 2kg8
(solution NMR)
Title: nmr solution structures of malonyl acp from the actinorhodin polyketide synthase in streptomyces coelicolor
Author: m. p. crump, s. e. evans, c. williams, p. eliza
Keywords: malonyl, polyketide, actinorhodin, antibiotic biosynthesis, phosphopantetheine, biosynthetic protein
- 2kg9.pdb.
biosynthetic protein 07-mar-09 2kg9
(solution NMR)
Title: nmr solution structures of butyryl-acp (a non-polar, non pathway intermediate) from the actinorhodin polyketide synthase in streptomyces coelicolor
Author: m. p. crump, s. e. evans, c. williams
Keywords: polyketide, fatty acid, butyryl, antibiotic biosynthesis, phosphopantetheine, biosynthetic protein
- 2kga.pdb.
biosynthetic protein 07-mar-09 2kga
(solution NMR)
Title: nmr solution structures of hexanoyl acp (a non natural intermediate) from the actinorhodin polyketide synthase in streptomyces coelicolor
Author: m. p. crump, s. e. evans, c. williams
Keywords: fatty acid, polyketide, hexanoyl, conformational change, antibiotic biosynthesis, phosphopantetheine, biosynthetic protein
- 2kgc.pdb.
biosynthetic protein 08-mar-09 2kgc
(solution NMR)
Title: nmr solution structures of octanoyl acp (a non-natural intermediate) from the actinorhodin polyketide synthase in streptomyces coelicolor
Author: m. p. crump, s. e. evans, c. williams
Keywords: polyketide, fatty acid, octanoyl, antibiotic biosynthesis, phosphopantetheine, biosynthetic protein
- 2kgd.pdb.
biosynthetic protein 08-mar-09 2kgd
(solution NMR)
Title: nmr solution structures of 3-oxo-butyl-acp, an intermediate mimic from the actinorhodin polyketide synthase in streptomyces coelicolor
Author: m. p. crump, s. e. evans, c. williams
Keywords: polyketide mimic, diketide, actinorhodin, coelicolor, antibiotic biosynthesis, phosphopantetheine, biosynthetic protein
- 2kge.pdb.
biosynthetic protein 08-mar-09 2kge
(solution NMR)
Title: nmr solution structures of 3,5-dioxohexyl acp (a triketide mimic) from the actinorhodin polyketide synthase in streptomyces coelicolor
Author: m. p. crump, s. e. evans, c. williams
Keywords: triketide, polyketide, actinorhodin, antibiotic biosynthesis, phosphopantetheine, biosynthetic protein
- 2kgp.pdb.
rna 13-mar-09 2kgp
(solution NMR)
Title: structural basis for stabilization of the tau pre-mrna splicing regulatory element by novantrone (mitoxantrone)
Author: s. zheng, y. chen, c. p. donahue, m. s. wolfe, g. varani
Keywords: splicing regulatory element, nmr, mitoxantrone, novantrone, rna-small molecule, tauopathies
- 2kgq.pdb.
plant protein 13-mar-09 2kgq
(solution NMR)
Title: refined solution structure of des-pyro glu brazzein
Author: c. c. cornilescu, m. tonelli, m. l. derider, j. l. markley, f. m. assadi- porter, center for eukaryotic structural genomics (cesg)
Keywords: center for eukaryotic structural genomics, cesg, plant protein
- 2nlk.pdb.
hydrolase 20-oct-06 2nlk
Title: crystal structure of d1 and d2 catalytic domains of human protein tyrosine phosphatase gamma (d1+d2 ptprg)
Author: p. filippakopoulos, o. gileadi, c. johansson, e. ugochukwu, a. edwards, c. arrowsmith, m. sundstrom, f. von delft, s. knapp, structural genomics consortium (sgc)
Keywords: r-ptp gamma, protein tyrosine phosphatase gamma, d3s1249, hptpg, rptpg, ptpg, d1-d2 catalytic domains, structural genomics, structural genomics consortium, sgc, hydrolase
- 2nnh.pdb.
oxidoreductase,electron transport 24-oct-06 2nnh
Fe
Title: cyp2c8dh complexed with 2 molecules of 9-cis retinoic acid
Author: g. a. schoch, j. k. yano, c. d. stout, e. f. johnson
Keywords: oxidoreductase,electron transport
- 2nni.pdb.
oxidoreductase,electron transport 24-oct-06 2nni
Cl Fe
Title: cyp2c8dh complexed with montelukast
Author: g. a. schoch, j. k. yano, c. d. stout, e. f. johnson
Keywords: oxidoreductase, electron transport
- 2nnj.pdb.
oxidoreductase,electron transport 24-oct-06 2nnj
Cl Fe
Title: cyp2c8dh complexed with felodipine
Author: g. a. schoch, j. k. yano, c. d. stout, e. f. johnson
Keywords: oxidoreductase,electron transport
- 2npq.pdb.
transferase 29-oct-06 2npq
Title: a novel lipid binding site in the p38 alpha map kinase
Author: r. diskin, d. engelberg, o. livnah
Keywords: kinase, protein-lipid complex, transferase
- 2nrq.pdb.
structural genomics, unknown function 02-nov-06 2nrq
Se
Title: crystal structure of protein sso0741 from sulfolobus solfataricus, pfam duf54
Author: k. n. rao, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: conserved hypothetical protein, sulfolobus solfataricus, 10077c, structural genomics, psi, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, unknown functio...
- 2nwu.pdb.
structural genomics, unknown function 16-nov-06 2nwu
Se
Title: crystal structure of protein sso1042 from sulfolobus solfataricus, pfam duf54
Author: k. n. rao, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: unknown function
- 2nz6.pdb.
hydrolase 22-nov-06 2nz6
Cl Ni
Title: crystal structure of the ptprj inactivating mutant c1239s
Author: e. ugochukwu, a. barr, p. savitsky, a. c. w. pike, g. bunkoczi, m. sundstrom, j. weigelt, c. h. arrowsmith, a. edwards, f. von delft, s. knapp, structural genomics consortium (sgc)
Keywords: ptprj, glycoprotein, protein phosphatase, structural genomics, structural genomics consortium, sgc
- 2oc3.pdb.
hydrolase 20-dec-06 2oc3
Title: crystal structure of the catalytic domain of human protein tyrosine phosphatase non-receptor type 18
Author: e. ugochukwu, a. barr, i. alfano, f. gorrec, c. umeano, p. savitsky, f. sobott, j. eswaran, e. papagrigoriou, j. e. debreczeni, a. turnbull, g. bunkoczi, m. sundstrom, c. h. arrowsmith, j. weigelt, a. edwards, f. von delft, s. knapp, structural genomics consortium (sgc)
Keywords: receptor, human, structural genomics, structural genomics consortium, sgc, hydrolase
- 2oc8.pdb.
viral protein 20-dec-06 2oc8
Zn
Title: structure of hepatitis c viral ns3 protease domain complexed with ns4a peptide and ketoamide sch503034
Author: a. j. prongay, z. guo, n. yao, t. fischmann, c. strickland, j. myers, p. c. weber, b. malcolm, b. m. beyer, r. ingram, j. pichardo, z. hong, w. w. prosise, l. ramanathan, s. s. taremi, t. yarosh-tomaine, r. zhang, m. senior, r. s. yang, a. arasappan, f. bennett, s. l. bogen, k. chen, e. jao, y. t. liu, r. g. lovey, a. k. saksena, s. venkatraman, v. girijavallabhan, f. g. njoroge, v. madison
Keywords: hcv, ns3 protease domain, ketoamide inhibitor, viral protein
- 2ogk.pdb.
structural genomics, unknown function 05-jan-07 2ogk
Title: crystal structure of protein af2318 from archaeglobus fulgidus, pfam duf54
Author: k. n. rao, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: conserved hypothetical protein, archaeglobus fulgidus, 10077d, structural genomics, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, unknown functio...
- 2ojp.pdb.
lyase 13-jan-07 2ojp
Title: the crystal structure of a dimeric mutant of dihydrodipicolinate synthase from e.coli- dhdps-l197y
Author: m. d. w. griffin, r. c. j. dobson, l. antonio, m. a. perugini, g. b. jameson, j. a. gerrard
Keywords: dhdps, dimer, lysine biosynthesis, lyase
- 2okg.pdb.
transcription 16-jan-07 2okg
Cl Se
Title: structure of effector binding domain of central glycolytic gene regulator (cggr) from b. subtilis
Author: p. rezacova, s. f. moy, a. joachimiak, z. otwinowski, midwest center for structural genomics (mcsg)
Keywords: rossmann-like fold, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, transcription
- 2ooq.pdb.
hydrolase 26-jan-07 2ooq
Na
Title: crystal structure of the human receptor phosphatase ptprt
Author: e. ugochukwu, i. alfano, a. barr, t. keates, j. eswaran, e. salah, p. savitsky, g. bunkoczi, a. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, f. von delft, s. knapp, structural genomics consortium (sgc)
Keywords: receptor, human, structural genomics, structural genomics consortium, sgc, hydrolase
- 2oxe.pdb.
hydrolase 20-feb-07 2oxe
Cl Ca
Title: structure of the human pancreatic lipase-related protein 2
Author: j. r. walker, t. davis, a. seitova, p. j. finerty jr. , c. butler-cole, i. kozieradzki, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: hydrolase, lipid degradation, pancreatic lipase, structural genomics consortium, sgc
- 2p6x.pdb.
hydrolase 19-mar-07 2p6x
Cl
Title: crystal structure of human tyrosine phosphatase ptpn22
Author: e. ugochukwu, e. salah, a. barr, l. shrestha, i. alfano, n. burgess- brown, o. king, c. umeano, e. papagrigoriou, a. c. w. pike, g. bunkoczi, a. turnbull, j. uppenberg, m. sundstrom, c. h. arrowsmith, j. weigelt, a. edwards, f. von delft, s. knapp, structural genomics consortium (sgc)
Keywords: lymphoid phosphatase, pep, lyp, structural genomics, structural genomics consortium, sgc, hydrolase
- 2pa5.pdb.
hydrolase 27-mar-07 2pa5
Cl
Title: crystal structure of human protein tyrosine phosphatase ptpn9
Author: e. ugochukwu, a. barr, a. c. w. pike, p. savitsky, e. papagrigoriou, a. turnbull, j. uppenberg, g. bunkoczi, e. salah, s. das, f. von delft, m. sundstrom, c. h. arrowsmith, j. weigelt, a. edwards, s. knapp, structural genomics consortium (sgc)
Keywords: meg2, ptpn9, structural genomics, structural genomics consortium, sgc, hydrolase
- 2pfd.pdb.
transferase, lyase 04-apr-07 2pfd
Se
Title: anisotropically refined structure of ftcd
Author: b. k. poon, x. chen, m. lu, f. a. quiocho, q. wang, j. ma
Keywords: transferase, lyase
- 2ppp.pdb.
lyase 30-apr-07 2ppp
Title: crystal structure of e60q mutant of fkbp12
Author: s. szep, s. park, g. d. vanduyne, j. f. saven
Keywords: lyase
- 2pqa.pdb.
replication 01-may-07 2pqa
Title: crystal structure of full-length human rpa 14/32 heterodimer
Author: x. deng, g. e. borgstahl
Keywords: replication
- 2pzz.pdb.
structural genomics, unknown function 18-may-07 2pzz
Se
Title: 2.2 a resolution crystal structure of upf0201 protein from methanococcus jannaschii
Author: k. n. rao, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: upf0201, mj1564, 10077a3, methanococcus jannaschii, psi2, nysgxrc, structural genomics, protein structure initiative, new york sgx research center for structural genomics, unknown function
- 2q0m.pdb.
hydrolase 22-may-07 2q0m
Cl F Mn Na
Title: tricarbonylmanganese(i)-lysozyme complex : a structurally characterized organometallic protein
Author: m. razavet, v. artero, c. cavazza, y. oudart, j. c. fontecilla-camps, m. fontecave
Keywords: tricarbonyl manganese(i), hydrolase
- 2q1k.pdb.
chaperone 24-may-07 2q1k
Se
Title: cyrstal structure of asce from aeromonas hydrophilla
Author: y. w. tan, h. b. yu, k. y. leung, j. sivaraman, y. k. mok
Keywords: chaperone, ttss
- 2q1n.pdb.
structural protein 25-may-07 2q1n
Ca
Title: actin dimer cross-linked between residues 41 and 374
Author: m. r. sawaya, i. pashkov, d. s. kudryashov, h. adisetiyo, e. reisler, t. o. yeates
Keywords: structural protein
- 2q31.pdb.
structural protein 29-may-07 2q31
Ca
Title: actin dimer cross-linked between residues 41 and 374 and proteolytically cleaved by subtilisin between residues 47 and 48.
Author: m. r. sawaya, i. pashkov, d. s. kudryashov, e. reisler, t. o. yeates
Keywords: proteolytically cleaved, structural protein
- 2q36.pdb.
structural protein 29-may-07 2q36
Ca
Title: actin dimer cross-linked between residues 191 and 374 and complexed with kabiramide c
Author: m. r. sawaya, i. pashkov, d. s. kudryashov, e. reisler, t. o. yeates
Keywords: structural protein
- 2q58.pdb.
transferase 31-may-07 2q58
Mg
Title: cryptosporidium parvum putative polyprenyl pyrophosphate synthase (cgd4_2550) in complex with zoledronate
Author: m. chruszcz, j. artz, h. zheng, a. dong, j. dunford, j. lew, y. zhao, i. kozieradski, k. l. kavanaugh, u. opperman, m. sundstrom, j. weigelt, a. edwards, c. arrowsmith, a. bochkarev, r. hui, w. minor, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc, transferase
- 2q60.pdb.
transcription 04-jun-07 2q60
Title: crystal structure of the ligand binding domain of polyandrocarpa misakiensis rxr in tetramer in absence of ligand
Author: f. borel, a. de groot, c. juillan-binard, e. de rosny, v. laudet, e. pebay-peyroula, j. -c. fontecilla-camps, j. -l. ferrer
Keywords: apo-tetramer, transcription
- 2q6p.pdb.
luminescent protein 05-jun-07 2q6p
F
Title: the chemical control of protein folding: engineering a superfolder green fluorescent protein
Author: t. steiner, p. hess, j. h. bae, b. wiltschi, l. moroder, n. budisa
Keywords: noncanonical amino acid, superfolder, luminescent protein
- 2q6q.pdb.
cell cycle 05-jun-07 2q6q
Cl Co
Title: crystal structure of spc42p, a critical component of spindle pole body in budding yeast
Author: v. n. malashkevich, j. r. newman, p. s. kim
Keywords: spindle pole body, budding yeast, crystal structure, coiled coil, cell cycle
- 2qep.pdb.
hydrolase 26-jun-07 2qep
Cl
Title: crystal structure of the d1 domain of ptprn2 (ia2beta)
Author: e. ugochukwu, a. barr, i. alfano, g. berridge, n. burgess-brown, s. das, o. fedorov, o. king, f. niesen, s. watt, p. savitsky, e. salah, a. c. w. pike, g. bunkoczi, f. von delft, m. sundstrom, a. edwards, c. h. arrowsmith, j. weigelt, s. knapp, structural genomics consortium (sgc)
Keywords: ptprp, phogrin, ia-2 beta, autoantigen, structural genomics, structural genomics consortium, sgc, hydrolase
- 2qhc.pdb.
hydrolase 02-jul-07 2qhc
Title: the influence of i47a mutation on reduced susceptibility to the protease inhibitor lopinavir
Author: j. brynda, k. g. saskova, m. kozisek, m. lepsik, l. machala, j. konvalinka
Keywords: resistant strain, hydrolase
- 2qhd.pdb.
hydrolase 02-jul-07 2qhd
Title: crystal structure of ecarpholin s (ser49-pla2) complexed with fatty acid
Author: x. zhou, t. c. tan, s. valiyaveettil, m. l. go, r. m. kini, j. sivaraman
Keywords: three helices, protein-ligand complex, hydrolase
- 2qhx.pdb.
oxidoreductase 03-jul-07 2qhx
I
Title: structure of pteridine reductase from leishmania major complexed with a ligand
Author: f. gibellini, k. mcluskey, l. tulloch, w. n. hunter
Keywords: short-chain dehydrogenase/reductase, pteridine reductase, trypanosomatid, pterin salvage, drug resistance, methotrexate resistance, enzyme inhibitor, nadp/nadph
- 2qjl.pdb.
signaling protein 07-jul-07 2qjl
Mg
Title: crystal structure of urm1
Author: j. yu, c. z. zhou
Keywords: signaling protein
- 2ql2.pdb.
transcription/dna 12-jul-07 2ql2
Title: crystal structure of the basic-helix-loop-helix domains of the heterodimer e47/neurod1 bound to dna
Author: r. b. rose, a. longo, g. p. guanga
Keywords: phosphoprotein, transcription/dna complex
- 2qm0.pdb.
structural genomics, unknown function 13-jul-07 2qm0
Se
Title: crystal structure of bes protein from bacillus cereus
Author: y. kim, n. maltseva, a. zawadzka, d. holzle, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 2qpz.pdb.
metal binding protein 25-jul-07 2qpz
Fe
Title: naphthalene 1,2-dioxygenase rieske ferredoxin
Author: e. n. brown, s. ramaswamy, a. karlsson, r. friemann, j. v. parales, r. parales, d. t. gibson
Keywords: 2fe-2s, aromatic hydrocarbons catabolism, electron transport, iron, iron-sulfur, metal-binding, plasmid, transport, metal binding protein
- 2qs9.pdb.
structural protein 30-jul-07 2qs9
Se
Title: crystal structure of the human retinoblastoma-binding protein 9 (rbbp-9). nesg target hr2978
Author: s. m. vorobiev, m. su, j. seetharaman, a. kuzin, c. x. chen, k. cunningham, l. owens, m. maglaqui, r. xiao, t. b. acton, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: alternative splicing, cytoplasm, nucleus, phosphorylation, structural protein
- 2qtm.pdb.
transferase 02-aug-07 2qtm
Co
Title: crystal structure of nicotinate mononucleotide adenylyltransferase
Author: v. c. sershon, b. d. santarsiero, a. d. mesecar
Keywords: nucleotidyltransferase, pyridine nucleotide biosynthesis, transferase
- 2qtn.pdb.
transferase 02-aug-07 2qtn
Mg
Title: crystal structure of nicotinate mononucleotide adenylyltransferase
Author: v. c. sershon, b. d. santarsiero, a. d. mesecar
Keywords: nucleotidyltransferase, pyridine nucleotide biosynthesis, transferase
- 2qtr.pdb.
transferase 02-aug-07 2qtr
Title: crystal structure of nicotinate mononucleotide adenylyltransferase
Author: v. c. sershon, b. d. santarsiero, a. d. mesecar
Keywords: nucleotidyltransferase, pyridine nucleotide biosynthesis, transferase
- 2qug.pdb.
protease inhibitor 05-aug-07 2qug
Title: crystal structure of alpha-1-antitrypsin, crystal form a
Author: g. hansen, c. j. morton, m. c. pearce, s. c. feil, j. j. adams, m. w. parker, s. p. bottomley
Keywords: polymerisation, protein aggregation, protein unfolding, serpin, acute phase, disease mutation, glycoprotein, polymorphism, protease inhibitor, secreted, serine protease inhibitor
- 2quq.pdb.
dna binding protein, structural protein 06-aug-07 2quq
Title: crystal structure of the essential inner kinetochore protein cep3p
Author: j. j. bellizzi iii, s. c. harrison
Keywords: centromere, chromosomal protein, dna-binding, metal- binding, nucleus, phosphorylation, zinc, protein binding, cell cycle, dna binding protein, structural protein
- 2r38.pdb.
hydrolase 29-aug-07 2r38
Cl
Title: i84v hiv-1 protease mutant in complex with a carbamoyl decorated pyrrolidine-based inhibitor
Author: j. boettcher, a. blum, a. heine, w. e. diederich, g. klebe
Keywords: aspartyl protease, hydrolase, protease
- 2r3t.pdb.
hydrolase 30-aug-07 2r3t
Cl
Title: i50v hiv-1 protease mutant in complex with a carbamoyl decorated pyrrolidine-based inhibitor
Author: j. boettcher, a. blum, a. heine, w. e. diederich, g. klebe
Keywords: aspartyl protease, hydrolase, protease
- 2r3w.pdb.
hydrolase 30-aug-07 2r3w
Cl
Title: i84v hiv-1 protease in complex with a amino decorated pyrrolidine-based inhibitor
Author: j. boettcher, a. blum, a. heine, w. e. diederich, g. klebe
Keywords: hydrolase
- 2r43.pdb.
hydrolase 30-aug-07 2r43
Cl
Title: i50v hiv-1 protease in complex with an amino decorated pyrrolidine-based inhibitor
Author: j. boettcher, a. blum, a. heine, w. e. diederich, g. klebe
Keywords: hydrolase
- 2r4l.pdb.
transport protein 31-aug-07 2r4l
Title: crystal structure of the long-chain fatty acid transporter fadl mutant p34a
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
- 2r4n.pdb.
transport protein 31-aug-07 2r4n
Title: crystal structure of the long-chain fatty acid transporter fadl mutant n33a
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
- 2r4o.pdb.
transport protein 31-aug-07 2r4o
Title: crystal structure of the long-chain fatty acid transporter fadl mutant delta npa
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
- 2r4p.pdb.
transport protein 31-aug-07 2r4p
Title: crystal structure of the long-chain fatty acid transporter fadl mutant g212e
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
- 2r69.pdb.
viral protein/immune system 05-sep-07 2r69
Title: crystal structure of fab 1a1d-2 complexed with e-diii of dengue virus at 3.8 angstrom resolution
Author: s. m. lok, v. k. kostyuchenko, g. e. nybakken, h. a holdaway, a. j. battisti, s. sukupolvi-petty, d. sedlak, d. h. fremont, p. r. chipman, j. t. roehrig, m. s. diamond, r. j. kuhn, m. g. rossmann
Keywords: capsid protein, cleavage on pair of basic residues, core protein, envelope protein, glycoprotein, membrane, transmembrane, virion, viral protein/immune system complex
- 2r6p.pdb.
virus/immune system 06-sep-07 2r6p
(electron microscopy)
Title: fit of e protein and fab 1a1d-2 into 24 angstrom resolution cryoem map of fab complexed with dengue 2 virus.
Author: s. m. lok, v. k. kostyuchenko, h. a. holdaway, p. r. chipman, r. j kuhn, m. g rossmann
Keywords: dengue, virus, neutralization, virus/immune system complex, icosahedral virus
- 2r82.pdb.
transferase 10-sep-07 2r82
Title: pyruvate phosphate dikinase (ppdk) triple mutant r219e/e271r/s262d adapts a second conformational state
Author: k. lim, r. j. read, c. c. chen, o. herzberg
Keywords: conformational transition, swiveling domain, remote active sites, atp-binding, kinase, magnesium, metal-binding, nucleotide-binding, phosphorylation
- 2r88.pdb.
transport protein 10-sep-07 2r88
Title: crystal structure of the long-chain fatty acid transporter fadl mutant delta s3 kink
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
- 2r8v.pdb.
transferase 11-sep-07 2r8v
Title: native structure of n-acetylglutamate synthase from neisseria gonorrhoeae
Author: d. shi, v. sagar, z. jin, x. yu, l. caldovic, h. morizono, n. m. allewell, m. tuchman
Keywords: transferase
- 2r98.pdb.
transferase 12-sep-07 2r98
Se
Title: crystal structure of n-acetylglutamate synthase (selenomet substituted) from neisseria gonorrhoeae
Author: d. shi, v. sagar, z. jin, x. yu, l. caldovic, h. morizono, n. m. allewell, m. tuchman
Keywords: transferase
- 2ral.pdb.
cell adhesion 17-sep-07 2ral
Title: crystal structure analysis of double cysteine mutant of s.epidermidis adhesin sdrg: evidence for the dock,lock and latch ligand binding mechanism
Author: k. ponnuraj, n. sthanam, m. g. bowden, m. hook
Keywords: sdrg, sdrg mutant, calcium, cell wall, metal- binding, peptidoglycan-anchor, secreted, virulence, metal binding protein, cell adhesion
- 2reg.pdb.
transport protein 26-sep-07 2reg
Title: abc-transporter choline binding protein in complex with choline
Author: c. oswald, l. schimtt, s. h. j. smits, m. hoeing, l. sohn-boeser, e. bremer
Keywords: type ii binding protein, aromatic box, transport protein
- 2rej.pdb.
choline-binding protein 26-sep-07 2rej
Title: abc-transporter choline binding protein in unliganded semi- closed conformation
Author: c. oswald, s. h. j. smits, m. hoeing, l. sohn-boeser, d. le rudulier, l. schmitt, e. bremer
Keywords: aromatic box, abc-transporter, transport protein, choline-binding protein
- 2rf1.pdb.
transport protein 27-sep-07 2rf1
Title: crystal structure of chox in an unliganded closed conformation
Author: c. oswald, s. h. j. smits, m. hoeing, l. sohn-boeser, d. le rudulier, l. schmitt, e. bremer
Keywords: aromatic box, abc-transporter, transport protein
- 2rf3.pdb.
dna 27-sep-07 2rf3
Zn
Title: crystal structure of tricyclo-dna: an unusual compensatory change of two adjacent backbone torsion angles
Author: p. s. pallan, d. ittig, a. heroux, z. wawrzak, c. j. leumann, m. egli
Keywords: x-ray crystal structure, tricyclo-dna, conformationally constrained dna analog
- 2rgv.pdb.
dna binding protein 05-oct-07 2rgv
Zn
Title: the crystal structure of perr-ox highlights 2-oxo-histidine formation
Author: d. a. k. traore
Keywords: perr-ox, cytoplasm, dna-binding, manganese, oxidation, repressor, transcription, transcription regulation, zinc, dna binding protein
- 2rin.pdb.
protein binding 12-oct-07 2rin
Title: abc-transporter choline binding protein in complex with acetylcholine
Author: c. oswald, s. h. j. smits, m. hoeing, l. sohn-boeser, d. le rudulier, l. schmitt, e. bremer
Keywords: type ii binding protein, aromatic box, acetylcholine, protein binding
- 2rq5.pdb.
transcription 06-feb-09 2rq5
(solution NMR)
Title: solution structure of the at-rich interaction domain (arid) of jumonji/jarid2
Author: h. kusunoki, t. kohno
Keywords: developmental protein, nucleus, repressor, transcription, transcription regulation
- 2uuu.pdb.
transferase 07-mar-07 2uuu
Title: alkyldihydroxyacetonephosphate synthase in p212121
Author: a. razeto, f. mattiroli, e. carpanelli, a. aliverti, v. pandini, a. coda, a. mattevi
Keywords: biosynthesis of phospholipids, flavoprotein, lipid synthesis, peroxisomal disorder, fad, flavin, peroxisome, transferase, plasmalogens
- 2uuv.pdb.
transferase 07-mar-07 2uuv
Title: alkyldihydroxyacetonephosphate synthase in p1
Author: a. razeto, f. mattiroli, e. carpanelli, a. aliverti, v. pandini, a. coda, a. mattevi
Keywords: biosynthesis of phospholipids, flavoprotein, lipid synthesis, peroxisomal disorder, fad, flavin, peroxisome, transferase, plasmalogens
- 2uv2.pdb.
transferase 08-mar-07 2uv2
Title: crystal structure of human ste20-like kinase bound to 4-(4-( 5-cyclopropyl-1h-pyrazol-3-ylamino)-quinazolin-2-ylamino)- phenyl)-acetonitrile
Author: a. c. w. pike, p. rellos, o. fedorov, t. keates, e. salah, p. savitsky, e. papagrigoriou, g. bunkoczi, j. e. debreczeni, f. von delft, c. h. arrowsmith, a. edwards, j. weigelt, m. sundstrom, s. knapp
Keywords: alternative splicing, serine-threonine-protein kinase
- 2uwe.pdb.
immune system 20-mar-07 2uwe
Title: large cdr3a loop alteration as a function of mhc mutation
Author: p. j. miller, y. pazy, b. conti, d. riddle, w. e. biddison, e. appella, e. j. collins
Keywords: ubl conjugation, immune response, tcr-pmhc complex, t cell signaling, disease mutation
- 2v2g.pdb.
oxidoreductase 05-jun-07 2v2g
Title: crystal structure of the c45s mutant of the peroxiredoxin 6 of arenicola marina. monoclinic form
Author: a. smeets, j. p. declercq
Keywords: peroxiredoxins, antioxidant enzymes, arenicola marina
- 2v3o.pdb.
blood clotting 19-jun-07 2v3o
F Na Ca
Title: thrombin with 3-cycle with f
Author: d. w. banner, h. p. wessel
Keywords: gamma-carboxyglutamic acid, pharmaceutical, serine protease, calcium-binding, kringle, calcium, zymogen, protease, hydrolase
- 2v4z.pdb.
cell cycle 30-sep-08 2v4z
Mg F Al
Title: the crystal structure of the human g-protein subunit alpha ( gnai3) in complex with an engineered regulator of g- protein signaling type 2 domain (rgs2)
Author: a. k. roos, m. soundararajan, a. c. w. pike, c. h. arrowsmith, j. weigelt, a. edwards, c. bountra, s. knapp
Keywords: palmitate, myristate, transducer, cell cycle
- 2v5h.pdb.
transcription 04-jul-07 2v5h
Cl Na
Title: controlling the storage of nitrogen as arginine: the complex of pii and acetylglutamate kinase from synechococcus elongatus pcc 7942
Author: j. l. llacer, c. marco-marin, f. gil-ortiz, i. fita, v. rubio
Keywords: kinase, trimer, hexamer, atp-binding, arginine inhibition, arginine biosynthesis
- 2v5m.pdb.
cell adhesion 06-jul-07 2v5m
Title: structural basis for dscam isoform specificity
Author: r. meijers, r. puettmann-holgado, g. skiniotis, j. -h. liu, t. walz, d. schmucker, j. -h. wang
Keywords: neurobiology spl, immunoglobulin domain, cell adhesion, membrane, developmental protein
- 2v64.pdb.
cell cycle 13-jul-07 2v64
Title: crystallographic structure of the conformational dimer of the spindle assembly checkpoint protein mad2.
Author: m. mapelli, l. massimiliano, s. santaguida, a. musacchio
Keywords: mad2, nucleus, mitosis, apoptosis, cell cycle, cell division, phosphorylation, conformational dimer
- 2vgy.pdb.
chaperone 16-nov-07 2vgy
Title: crystal structure of the yersinia enterocolitica type iii secretion translocator chaperone sycd (alternative dimer)
Author: c. r. buttner, i. sorg, g. r. cornelis, d. w. heinz, h. h. niemann
Keywords: chaperone, sycd, tetratricopeptide repeat, type iii secretion
- 2vpk.pdb.
transcription 29-feb-08 2vpk
Title: crystal structure of the btb domain of human myoneurin
Author: c. d. o. cooper, j. w. murray, a. bullock, a. c. w. pike, f. vondelft, p. filippakopoulos, e. salah, a. edwards, c. h. arrowsmith, c. bountra, j. weigelt, s. knapp
Keywords: transcription, metal-binding, alternative splicing, zinc, nucleus, btb domain, zinc-finger, dna-binding
- 2vri.pdb.
viral protein 08-apr-08 2vri
Title: structure of the nsp3 x-domain of human coronavirus nl63
Author: y. piotrowski, j. r. mesters, r. moll, r. hilgenfeld
Keywords: thiol protease, nuclease, hydrolase, cytoplasm, hcov-nl63, zinc-finger, nucleotidyltransferase, ribosomal frameshifting, rna-directed rna polymerase
- 2vsw.pdb.
hydrolase 30-apr-08 2vsw
Title: the structure of the rhodanese domain of the human dual specificity phosphatase 16
Author: j. w. murray, a. barr, a. c. w. pike, j. elkins, c. phillips, j. wang, p. savitsky, a. roos, s. bishop, m. wickstroem, c. bountra, a. m. edwards, c. h. arrowsmith, n. burgess-brown, n. pantic, j. bray, f. vondelft, o. gileadi, s. knapp
Keywords: protein phosphatase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, casp8
- 2vui.pdb.
dna-binding 26-may-08 2vui
Mg F Be
Title: crystal structure of the hupr receiver domain in inhibitory phospho-state
Author: k. m. davies, e. d. lowe, c. venien-bryan, l. n. johnson
Keywords: response regulator
- 2vuo.pdb.
immune system 27-may-08 2vuo
Title: crystal structure of the rabbit igg fc fragment
Author: e. girardi, m. d. holdom, a. m. davies, b. j. sutton, a. j. beavil
Keywords: immunoglobulin c region, igg, rabbit, fc fragment, glycosylation, immunoglobulins, immunoglobulin domain
- 2vzx.pdb.
fluorescent protein 06-aug-08 2vzx
Title: structural and spectroscopic characterization of photoconverting fluorescent protein dendra2
Author: v. adam, k. nienhaus, d. bourgeois, g. u. nienhaus
Keywords: photoactivation, gfp-like protein, dendra2
- 2w0m.pdb.
unknown function 19-aug-08 2w0m
Zn
Title: crystal structure of sso2452 from sulfolobus solfataricus p2
Author: a. mcrobbie, l. carter, k. a. johnson, m. kerou, h. liu, s. mcmahon, m. oke, j. h. naismith, m. f. white
Keywords: reca, sulfolobus solfataricus p2, sspf, unknown function
- 2w3x.pdb.
hydrolase 17-nov-08 2w3x
Title: crystal structure of a bifunctional hotdog fold thioesterase in enediyne biosynthesis, cale7
Author: m. kotaka, r. kong, i. qureshi, q. s. ho, h. sun, c. w. liew, l. p. goh, p. cheung, y. mu, j. lescar, z. x. liang
Keywords: hotdog fold, thioesterase, enediyne biosynthesis
- 2w8n.pdb.
oxidoreductase 19-jan-09 2w8n
Title: the crytal structure of the oxidized form of human ssadh
Author: y. -g. kim, k. -j. kim
Keywords: dehydrogenase, oxidoreductase, transit peptide, disease mutation, ssa, nad, ssadh, polymorphism, mitochondria
- 2w8o.pdb.
oxidoreductase 19-jan-09 2w8o
Title: the crystal structure of the reduced form of human ssadh
Author: y. -g. kim, k. -j. kim
Keywords: oxidoreductase, transit peptide, ssa, nad, ssadh, polymorphism, mitochondria, disease mutation
- 2w8p.pdb.
oxidoreductase 19-jan-09 2w8p
Title: the crystal structure of human c340a ssadh
Author: y. -g. kim, k. -j. kim
Keywords: oxidoreductase, transit peptide, ssa, nad, ssadh, polymorphism, mitochondria, disease mutation
- 2w8q.pdb.
oxidoreductase 19-jan-09 2w8q
Title: the crystal structure of human ssadh in complex with ssa.
Author: y. -g. kim, k. -j. kim
Keywords: dehydrogenase, oxidoreductase, transit peptide, disease mutation, ssa, nad, ssadh, polymorphism, mitochondria
- 2w8r.pdb.
oxidoreductase 19-jan-09 2w8r
Title: the crystal structure of human ssadh in complex with nad+
Author: y. -g. kim, k. -j. kim
Keywords: oxidoreductase, transit peptide, ssa, nad, gaba, ssadh, polymorphism, mitochondria, disease mutation
- 2w8x.pdb.
membrane protein 20-jan-09 2w8x
Title: structure of the tick ion-channel modulator ra-klp
Author: g. c. paesen, c. siebold, m. dallas, c. peers, k. harlos, p. a. nuttall, m. a. nunn, d. i. stuart, r. m. esnouf
Keywords: kunitz domains, maxik channel activation, sulphur sad, membrane protein
- 2wcd.pdb.
toxin 11-mar-09 2wcd
Hg
Title: crystal structure of the assembled cytolysin a pore
Author: m. mueller, u. grauschopf, t. maier, r. glockshuber, n. ban
Keywords: pore-forming toxin, transmembrane pore, toxin, membrane, secreted, cytolysis, periplasm, hemolysis, transmembrane, disulfide bond
- 2wev.pdb.
transferase 01-apr-09 2wev
Title: truncation and optimisation of peptide inhibitors of cdk2, cyclin a through structure guided design
Author: g. kontopidis, m. j. andrews, c. mcinnes, a. plater, l. innes, s. renachowski, a. cowan, p. m. fischer
Keywords: beta-peptide, cyclin groove
- 2wf1.pdb.
hydrolase 02-apr-09 2wf1
Title: human bace-1 in complex with 7-ethyl-n-((1s,2r)-2-hydroxy-3- (((3-(methyloxy)phenyl(methyl)amino)-1-(phenylmethyl) propyl)-1-methyl-3,4-dihydro-1h-(1,2,5)thiadiazepino(3,4,5- hi)indole-9-carboxamide 2,2-dioxide
Author: n. charrier, b. clarke, e. demont, c. dingwall, r. dunsdon, j. hawkins, j. hubbard, i. hussain, g. maile, r. matico, j. mosley, a. naylor, a. o'brien, s. redshaw, p. rowland, v. soleil, k. j. smith, s. sweitzer, p. theobald, d. vesey, d. s. walter, g. wayne
Keywords: beta-site app cleaving enzyme
- 2wf2.pdb.
hydrolase 02-apr-09 2wf2
Title: human bace-1 in complex with 8-ethyl-n-((1s,2r)-2-hydroxy-3- (((3-(methyloxy)phenyl)methyl)amino)-1-(phenylmethyl) propyl)-1-methyl-3,4,7,8-tetrahydro-1h,6h-(1,2,5) thiadiazepino(5,4,3-de)quinoxaline-10-carboxamide 2,2- dioxide
Author: n. charrier, b. clarke, e. demont, c. dingwall, r. dunsdon, j. hawkins, j. hubbard, i. hussain, g. maile, r. matico, j. mosley, a. naylor, a. o'brien, s. redshaw, p. rowland, v. soleil, k. j. smith, s. sweitzer, p. theobald, d. vesey, d. s. walter, g. wayne
Keywords: beta-site app cleaving enzyme
- 2wf3.pdb.
hydrolase 02-apr-09 2wf3
Title: human bace-1 in complex with 6-(ethylamino)-n-((1s,2r)-2- hydroxy-3-(((3-(methyloxy)phenyl)methyl)amino)-1-( phenylmethyl)propyl)-1-methyl-1,3,4,5-tetrahydro-2,1- benzothiazepine-8-carboxamide 2,2-dioxide
Author: n. charrier, b. clarke, e. demont, c. dingwall, r. dunsdon, j. hawkins, j. hubbard, i. hussain, g. maile, r. matico, j. mosley, a. naylor, a. o'brien, s. redshaw, p. rowland, v. soleil, k. j. smith, s. sweitzer, p. theobald, d. vesey, d. s. walter, g. wayne
Keywords: beta-site app cleaving enzyme
- 2wfw.pdb.
atp-binding protein 15-apr-09 2wfw
Title: structure and activity of the n-terminal substrate recognition domains in proteasomal atpases - the arc domain structure
Author: s. djuranovic, m. d. hartmann, m. habeck, a. ursinus, p. zwickl, j. martin, a. n. lupas, k. zeth
Keywords: proteasomal atpases, pan, arc, aaa, atp-binding, nucleotide-binding
- 2wfy.pdb.
transferase 15-apr-09 2wfy
Title: truncation and optimisation of peptide inhibitors of cdk2, cyclin a through structure guided design
Author: g. kontopidis, m. j. andrews, c. mcinnes, a. plater, l. innes, s. renachowski, a. cowan, p. m. fischer
Keywords: beta-peptide, cyclin groove
- 2wg5.pdb.
transcription/hydrolase 15-apr-09 2wg5
Title: proteasome-activating nucleotidase (pan) n-domain (57-134) from archaeoglobus fulgidus fused to gcn4
Author: m. d. hartmann, s. djuranovic, a. ursinus, k. zeth, a. n. lupas
Keywords: transcription regulation, nucleus, dna-binding, activator, phosphoprotein
- 2wg6.pdb.
transcription/hydrolase 15-apr-09 2wg6
Title: proteasome-activating nucleotidase (pan) n-domain (57-134) from archaeoglobus fulgidus fused to gcn4, p61a mutant
Author: m. d. hartmann, s. djuranovic, a. ursinus, k. zeth, a. n. lupas
Keywords: transcription regulation, nucleus, dna-binding, activator, phosphoprotein
- 2wgm.pdb.
membrane protein 21-apr-09 2wgm
Na
Title: complete ion-coordination structure in the rotor ring of na- dependent f-atp synthase
Author: t. meier, d. pogoryelov, k. diederichs
Keywords: transmembrane, c-ring structure, sodium transport, ion transport, cell membrane, atp synthesis
- 2wgq.pdb.
oxidoreductase 23-apr-09 2wgq
Zn Ca
Title: zinc substituted e coli copper amine oxidase, a model for the precursor for 2,4,5-trihydroxyphenylalaninequinone formation
Author: p. c. e. moody, r. a. cooper
Keywords: zinc, copper, calcium, periplasm, amine oxidase, metal-binding, oxidoreductase
- 2wha.pdb.
transferase 02-may-09 2wha
F
Title: truncation and optimisation of peptide inhibitors of cdk2, cyclin a through structure guided design
Author: g. kontopidis, m. j. andrews, c. mcinnes, a. plater, l. innes, s. renachowski, a. cowan, p. m. fischer
Keywords: beta-peptide, cyclin groove
- 2whb.pdb.
transferase 03-may-09 2whb
F
Title: truncation and optimisation of peptide inhibitors of cdk2, cyclin a through structure guided design
Author: g. kontopidis, m. j. andrews, c. mcinnes, a. plater, l. innes, s. renachowski, a. cowan, p. m. fischer
Keywords: beta-peptide, cyclin groove
- 2wii.pdb.
immune system 12-may-09 2wii
Ca
Title: complement c3b in complex with factor h domains 1-4
Author: j. wu, b. j. c. janssen, p. gros
Keywords: cleavage on pair of basic residues, age-related macular degeneration, regulator of complement activation, alternative pathway, alternative splicing, phosphoprotein, disulfide bond, thioester bond
- 2win.pdb.
immune system 13-may-09 2win
Mg
Title: c3 convertase (c3bbb) stabilized by scin
Author: j. wu, b. j. c. janssen, p. gros
Keywords: thioester bond, glycoprotein, immune system
- 2wju.pdb.
transferase 29-may-09 2wju
Title: glutathione transferase a2-2 in complex with glutathione
Author: k. tars, b. olin, b. mannervik
Keywords: cytoplasm, transferase, glutathione, polymorphism
- 2zb3.pdb.
oxidoreductase 16-oct-07 2zb3
Title: crystal structure of mouse 15-ketoprostaglandin delta-13- reductase in complex with nadph
Author: y. h. wu, a. h. j. wang, t. p. ko, r. t. guo, s. m. hu, l. m. chuang
Keywords: oxidoreductase
- 2zb4.pdb.
oxidoreductase 16-oct-07 2zb4
Title: crystal structure of human 15-ketoprostaglandin delta-13- reductase in complex with nadp and 15-keto-pge2
Author: y. h. wu, a. h. j. wang, t. p. ko, r. t. guo, s. m. hu, l. m. chuang
Keywords: alternative splicing, cytoplasm, nadp, oxidoreductase
- 2zb7.pdb.
oxidoreductase 16-oct-07 2zb7
Title: crystal structure of human 15-ketoprostaglandin delta-13- reductase in complex with nadph and nicotinamide
Author: y. h. wu, a. h. j. wang, t. p. ko, r. t. guo, s. m. hu, l. m. chuang
Keywords: alternative splicing, cytoplasm, nadp, oxidoreductase
- 2zb8.pdb.
oxidoreductase 16-oct-07 2zb8
Cl
Title: crystal structure of human 15-ketoprostaglandin delta-13- reductase in complex with nadp and indomethacin
Author: y. h. wu, a. h. j. wang, t. p. ko, r. t. guo, s. m. hu, l. m. chuang
Keywords: alternative splicing, cytoplasm, nadp, oxidoreductase
- 2zfy.pdb.
hydrolase 16-jan-08 2zfy
Title: crystal structure of human otubain 1
Author: m. akutsu, j. r. walker, y. li, j. weigelt, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: otubain, structural genomics, structural genomics consortium, sgc, alternative splicing, hydrolase, immune response, phosphoprotein, protease, thiol protease, ubl conjugation pathway
- 2zgk.pdb.
hydrolase 23-jan-08 2zgk
Title: crystal structure of wildtype aal
Author: n. yang, d. f. li, d. c. wang
Keywords: jelly roll, apoptosis, hydrolase, nuclease
- 2zgl.pdb.
hydrolase 23-jan-08 2zgl
Title: crystal structure of recombinant agrocybe aegerita (raal)
Author: n. yang, d. f. li, d. c. wang
Keywords: jelly roll, apoptosis, hydrolase, nuclease
- 2zgm.pdb.
hydrolase 23-jan-08 2zgm
Title: crystal structure of recombinant agrocybe aegerita lectin, raal, complex with lactose
Author: d. f. li, n. yang, d. c. wang
Keywords: jelly roll, apoptosis, hydrolase, nuclease
- 2zgn.pdb.
hydrolase 23-jan-08 2zgn
Title: crystal structure of recombinant agrocybe aegerita lectin, raal, complex with galactose
Author: n. yang, d. f. li, d. c. wang
Keywords: jelly roll, apoptosis, hydrolase, nuclease
- 2zgo.pdb.
hydrolase 23-jan-08 2zgo
Title: crystal structure of aal mutant h59q complex with lactose
Author: d. f. li, n. yang, d. c. wang
Keywords: jelly roll, apoptosis, hydrolase, nuclease
- 2zgp.pdb.
hydrolase 23-jan-08 2zgp
Title: crystal structure of agrocybe aegerita lectin aal mutant i25g
Author: n. yang, d. f. li, d. c. wang
Keywords: jelly role, apoptosis, hydrolase, nuclease
- 2zgq.pdb.
hydrolase 23-jan-08 2zgq
Title: crystal structure of aal mutant l33a in p1 spacegroup
Author: d. f. li, n. yang, d. c. wang
Keywords: jelly roll, apoptosis, hydrolase, nuclease
- 2zgr.pdb.
hydrolase 23-jan-08 2zgr
Title: crystal structure of aal mutant l33a in c2 spacegroup
Author: n. yang, d. f. li, d. c. wang
Keywords: jelly roll, apoptosis, hydrolase, nuclease
- 2zgs.pdb.
hydrolase 23-jan-08 2zgs
Title: crystal structure of agrocybe aegerita lectin aal mutant l47a
Author: d. f. li, n. yang, d. c. wang
Keywords: jelly roll, apoptosis, hydrolase, nuclease
- 2zgt.pdb.
hydrolase 23-jan-08 2zgt
Title: crystal structure of agrocybe aegerita lectin aal mutant f93g
Author: d. f. li, n. yang, d. c. wang
Keywords: jelly roll, apoptosis, hydrolase, nuclease
- 2zgu.pdb.
hydrolase 23-jan-08 2zgu
Title: crystal structure agrocybe aegerita lectin aal mutant i144g
Author: d. f. li, n. yang, d. c. wang
Keywords: jelly roll, apoptosis, hydrolase, nuclease
- 2ziz.pdb.
hydrolase 29-feb-08 2ziz
Title: crystal structure of mycobacterium tuberculosis s-adenosyl- l-homocysteine hydrolase in ternary complex with nad and 3- deazaadenosine
Author: m. c. m. reddy, k. gokulan, n. d. shetty, j. l. owen, t. r. ioerger, j. c. sacchettini
Keywords: dimer of dimers, nad binding domain, 37 amino acid insertional region, cytoplasm, hydrolase, one-carbon metabolism
- 2zj0.pdb.
hydrolase 29-feb-08 2zj0
F
Title: crystal structure of mycobacterium tuberculosis s-adenosyl- l-homocysteine hydrolase in ternary complex with nad and 2- fluoroadenosine
Author: m. c. m. reddy, k. gokulan, n. d. shetty, j. l. owen, t. r. ioerger, j. c. sacchettini
Keywords: dimer of dimers, nad binding domain, 37 amino acid insertional region, cytoplasm, hydrolase, one-carbon metabolism
- 2zj1.pdb.
hydrolase 29-feb-08 2zj1
Title: crystal structure of mycobacterium tuberculosis s-adenosyl- l-homocysteine hydrolase in ternary complex with nad and 3'-keto-aristeromycin
Author: m. c. m. reddy, k. gokulan, n. d. shetty, j. l. owen, t. r. ioerger, j. c. sacchettini
Keywords: dimer of dimers, nad binding domain, 37 amino acid insertional region, cytoplasm, hydrolase, one-carbon metabolism
- 2zm1.pdb.
transferase 10-apr-08 2zm1
Cl
Title: crystal structure of imidazo pyrazin 1 bound to the kinase domain of human lck, (auto-phosphorylated on tyr394)
Author: e. tsuji
Keywords: nucleotide- binding, palmitate, phosphoprotein, proto-oncogene, sh2 domain, sh3 domain, transferase
- 2zm3.pdb.
transferase 10-apr-08 2zm3
Br
Title: complex structure of insulin-like growth factor receptor and isoquinolinedione inhibitor
Author: w. xu, s. c. mayer, f. boschelli, m. johnson, b. dwyer
Keywords: transferase, transmembrane, tyrosine-protein kinase
- 2zm4.pdb.
transferase 11-apr-08 2zm4
Cl
Title: crystal structure of imidazo quinoxaline 1 bound to the kinase domain of human lck, activated form (auto- phosphorylated on tyr394)
Author: e. tsuji
Keywords: nucleotide- binding, palmitate, phosphoprotein, proto-oncogene, sh2 domain, sh3 domain, transferase
- 2znm.pdb.
oxidoreductase 30-apr-08 2znm
Se
Title: oxidoreductase nmdsba3 from neisseria meningitidis
Author: j. p. vivian, j. scoullar, a. l. robertson, s. p. bottomley, j. horne, y. chin, t. velkov, j. wielens, p. e. thompson, s. piek, e. byres, t. beddoe, m. c. j. wilce, c. kahler, j. rossjohn, m. j. scanlon
Keywords: dsba-like, oxidoreductase
- 2zon.pdb.
oxidoreductase/electron transport 27-may-08 2zon
Cu Fe
Title: crystal structure of electron transfer complex of nitrite reductase with cytochrome c
Author: m. nojiri, h. koteishi, k. yamaguchi, s. suzuki
Keywords: electron transfer, denitrification, oxidoreductase/electron transport complex
- 2zoo.pdb.
oxidoreductase 27-may-08 2zoo
Cu Fe
Title: crystal structure of nitrite reductase from pseudoalteromonas haloplanktis tac125
Author: m. nojiri, a. tsuda, k. yamaguchi, s. suzuki
Keywords: electron transfer, electron transport, heme, iron, metal-binding, oxidoreductase, transport
- 2zov.pdb.
membrane protein 09-jun-08 2zov
Se
Title: structure of the periplasmic domain of motb from salmonella (crystal form i)
Author: k. imada, s. kojima, k. namba, m. homma
Keywords: bacterial flagellum, cell projection, chemotaxis, flagellar rotation, inner membrane, membrane, transmembrane, membrane protein
- 2zrs.pdb.
apoptosis 01-sep-08 2zrs
Ca
Title: crystal structure of ca2+-bound form of des3-23alg-2
Author: h. suzuki, m. kawasaki, t. kakiuchi, h. shibata, s. wakatsuki, m. maki
Keywords: calcium-binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus, polymorphism
- 2zrt.pdb.
apoptosis 01-sep-08 2zrt
Zn
Title: crystal structure of zn2+-bound form of des3-23alg-2
Author: h. suzuki, m. kawasaki, t. kakiuchi, h. shibata, s. wakatsuki, m. maki
Keywords: calcium-binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus, polymorphism
- 2zs6.pdb.
toxin 02-sep-08 2zs6
Title: ha3 subcomponent of botulinum type c progenitor toxin
Author: t. nakamura, t. tonozuka, m. kotani, k. oguma, a. nishikawa
Keywords: hemagglutinin, botulinum toxin
- 2ztt.pdb.
transferase 08-oct-08 2ztt
Se
Title: crystal structure of rna polymerase pb1-pb2 subunits from influenza a virus
Author: k. sugiyama, e. obayashi, s. -y. park
Keywords: virion
- 2zwi.pdb.
transferase 05-dec-08 2zwi
Cl Zn
Title: crystal structure of alpha/beta-galactoside alpha-2,3- sialyltransferase from a luminous marine bacterium, photobacterium phosphoreum
Author: t. iwatani, n. okino, m. sakakura, h. kajiwara, m. ichikawa, y. takakura, m. kimura, m. ito, t. yamamoto, y. kakuta
Keywords: 3-sialyltransfease, jt-ish-467, photobacterium phosphoreum, glycosyltransferase, transferase
- 2zz9.pdb.
transport protein 06-feb-09 2zz9
(electron crystallography)
Title: structure of aquaporin-4 s180d mutant at 2.8 a resolution by electron crystallography
Author: k. tani, t. mitsuma, y. hiroaki, a. kamegawa, k. nishikawa, y. tanimura, y. fujiyoshi
Keywords: phosphoprotein, transmembrane, transport, transport protein
- 3a0b.pdb.
electron transport 16-mar-09 3a0b
Mg Mn Br Fe Ca
Title: crystal structure of br-substituted photosystem ii complex
Author: k. kawakami, y. umena, n. kamiya, j. -r. shen
Keywords: electron transport, herbicide resistance, iron, membrane, metal-binding, photosynthesis, photosystem ii, thylakoid, transmembrane, transport, heme, reaction center
- 3a0h.pdb.
electron transport 17-mar-09 3a0h
Mg I Mn Fe Ca
Title: crystal structure of i-substituted photosystem ii complex
Author: k. kawakami, y. umena, n. kamiya, j. -r. shen
Keywords: electron transport, herbicide resistance, iron, membrane, metal-binding, photosynthesis, photosystem ii, thylakoid, transmembrane, transport, heme, reaction center
- 3a1g.pdb.
transferase 02-apr-09 3a1g
Se
Title: high-resolution crystal structure of rna polymerase pb1-pb2 subunits from influenza a virus
Author: k. sugiyama, s. -y. park, e. obayashi
Keywords: rna polymerase, crystal structure, nucleotide-binding, nucleotidyltransferase, nucleus, rna replication, rna-directed rna polymerase, transferase, mitochondrion, mrna capping, mrna processing, virion
- 3a1j.pdb.
hydrolase/cell cycle 08-apr-09 3a1j
Se
Title: crystal structure of the human rad9-hus1-rad1 complex
Author: s. y. sohn, y. cho
Keywords: checkpoint, dna repair, exonuclease, hydrolase, nuclease, nucleus, phosphoprotein, polymorphism, cytoplasm, alternative splicing, hydrolase/cell cycle complex
- 3b3i.pdb.
immune system 22-oct-07 3b3i
Title: citrullination-dependent differential presentation of a self-peptide by hla-b27 subtypes
Author: a. beltrami, m. rossmann, m. t. fiorillo, f. paladini, r. sorrentino, w. saenger, p. kumar, a. ziegler, b. uchanska-ziegler
Keywords: pyrrolidone carboxylic acid, secreted, alternative splicing, g-protein coupled receptor, phosphorylation, receptor, transducer, protein binding, immune system
- 3b4v.pdb.
hormone regulator complex 24-oct-07 3b4v
Title: x-ray structure of activin in complex with fstl3
Author: t. b. thompson
Keywords: cleavage on pair of basic residues, glycoprotein, growth factor, hormone, secreted, chromosomal rearrangement, nucleus, proto- oncogene, hormone regulator complex
- 3b5l.pdb.
hydrolase 26-oct-07 3b5l
Title: crystal structure of a novel engineered retroaldolase: ra-61
Author: b. l. stoddard, l. a. doyle
Keywords: retroaldolase, engineered, alpha-beta, computationally designed, glycosidase, hydrolase, xylan degradation
- 3b5v.pdb.
lyase 26-oct-07 3b5v
Title: crystal structure of a novel engineered retroaldolase: ra-22
Author: b. l. stoddard, l. a. doyle
Keywords: retroaldolase, engineered computationally designed, lyase
- 3b6o.pdb.
hydrolase 29-oct-07 3b6o
Li
Title: structure of trex1 in complex with a nucleotide and an inhibitor ion (lithium)
Author: m. brucet, j. querol-audi, i. fita, a. celada
Keywords: dedd, exonuclease, dnaq, lithium, catalysis, inhibition, deoxy-thimidine monophosphate (dtmp), dna damage, dna repair, hydrolase, magnesium, nucleus, phosphorylation
- 3b6p.pdb.
hydrolase 29-oct-07 3b6p
Zn Na
Title: structure of trex1 in complex with a nucleotide and inhibitor ions (sodium and zinc)
Author: m. brucet, j. querol-audi, i. fita, a. celada
Keywords: dedd, exonuclease, dnaq, sodium, zinc, catalysis, inhibition, deoxy-thimidine monophosphate (dtmp), dna damage, dna repair, hydrolase, magnesium, nucleus, phosphorylation
- 3b7o.pdb.
hydrolase 31-oct-07 3b7o
Title: crystal structure of the human tyrosine phosphatase shp2 (ptpn11) with an accessible active site
Author: e. ugochukwu, a. barr, a. patel, o. king, f. niesen, e. salah, p. savitsky, e. s. pilka, j. elkins, c. h. arrowsmith, j. weigelt, a. m. edwards, f. von delft, s. knapp, structural genomics consortium (sgc)
Keywords: sh2 domain
- 3b83.pdb.
unknown function 31-oct-07 3b83
Title: tba
Author: x. hu, h. ke, b. kuhlman
Keywords: computational redesigned protein, alternative splicing, cell adhesion, coiled coil, egf-like domain, extracellular matrix, glycoprotein, phosphorylation, polymorphism, secreted, unknown function
- 3b8g.pdb.
transferase 01-nov-07 3b8g
Title: crysta structure of n-acetylglutamate synthase from neisseria gonorrhoeae complexed with coenzyme a and n- acetyl-glutamate
Author: d. shi, v. sagar, z. jin, x. yu, l. caldovic, h. morizono, n. m. allewell, m. tuchman
Keywords: transferase
- 3b96.pdb.
oxidoreductase 02-nov-07 3b96
Title: structural basis for substrate fatty-acyl chain specificity: crystal structure of human very-long-chain acyl-coa dehydrogenase
Author: r. p. mcandrew, y. wang, a. w. mohsen, m. he, j. vockley, j. j. kim
Keywords: lipid metabolism, mitochondrion, oxidoreductase, polymorphism, transit peptide, ubl conjugation
- 3b9k.pdb.
immune system 05-nov-07 3b9k
Title: crystal structure of cd8alpha-beta in complex with yts 156.7 fab
Author: d. shore, i. a. wilson
Keywords: v-set, igsf dimer, alternative splicing, glycoprotein, immune response, membrane, transmembrane, polymorphism, immune system
- 3beh.pdb.
membrane protein 18-nov-07 3beh
K
Title: structure of a bacterial cyclic nucleotide regulated ion channel
Author: g. m. clayton, j. h. morais-cabral
- 3bl7.pdb.
hydrolase 10-dec-07 3bl7
F
Title: dcps bound to inhibitor dg156844
Author: b. l. staker
Keywords: dcps, ligand complex, cytoplasm, hydrolase, nonsense-mediated mrna decay, nucleus, polymorphism
- 3bl9.pdb.
hydrolase 10-dec-07 3bl9
Cl
Title: dcps bound to inhibitor dg157493
Author: b. l. staker
Keywords: dcps, ligand complex, cytoplasm, hydrolase, nonsense-mediated mrna decay, nucleus, polymorphism
- 3bla.pdb.
hydrolase 10-dec-07 3bla
Cl
Title: dcps bound to inhibitor dg153249
Author: b. l. staker
Keywords: dcps, ligand complex, cytoplasm, hydrolase, nonsense-mediated mrna decay, nucleus, polymorphism
- 3bmb.pdb.
rna binding protein 12-dec-07 3bmb
Cl
Title: crystal structure of a new rna polymerase interacting protein
Author: s. a. darst, v. lamour
Keywords: elongation factor, anti-gre factor, rna binding protein
- 3bo6.pdb.
lyase 17-dec-07 3bo6
Title: structure of the chromobacterium violaceum vira (spvc) phosphothreonine lyase effector protein
Author: d. f. brennan, s. m. roe, d. barford
- 3boa.pdb.
isomerase 17-dec-07 3boa
Title: crystal structure of yeast protein disulfide isomerase.
Author: g. tian, w. j. lennarz, h. schindelin
Keywords: endoplasmic reticulum,molecular flexibility,protein folding,thioredoxin, glycoprotein, isomerase, redox-active center
- 3bos.pdb.
hydrolase regulator 17-dec-07 3bos
Cl Mg Na Se
Title: crystal structure of putative dna replication regulator hda (yp_927791.1) from shewanella amazonensis sb2b at 1.75 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative dna replication regulator hda, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, hydrolase regulator
- 3bow.pdb.
hydrolase/hydrolase inhibitor 17-dec-07 3bow
Ca
Title: structure of m-calpain in complex with calpastatin
Author: r. a. hanna, r. l. campbell, p. l. davies
Keywords: hydrolase/hydrolase inhibitor complex
- 3bt3.pdb.
structural genomics, unknown function 27-dec-07 3bt3
Title: crystal structure of a glyoxalase-related enzyme from clostridium phytofermentans
Author: k. n. rao, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: dna-binding, transcription, transcription regulation, unknown function
- 3bus.pdb.
transferase 03-jan-08 3bus
Se
Title: crystal structure of rebm
Author: j. g. mccoy, s. singh, c. a. bingman, j. s. thorson, g. n. phillips
Keywords: methyltransferase, transferase
- 3bvo.pdb.
chaperone 07-jan-08 3bvo
Zn Se
Title: crystal structure of human co-chaperone protein hscb
Author: e. bitto, c. a. bingman, j. g. mccoy, g. e. wesenberg, g. n. phillips jr. , center for eukaryotic structural genomics (cesg)
Keywords: structural genomics medical relevance, protein structure initiative, psi-2, center for eukaryotic structural genomics, cesg, mitochondrion, transit peptide
- 3bxe.pdb.
gene regulation 13-jan-08 3bxe
Title: crystal structure of effector binding domain of central glycolytic gene regulator (cggr) from bacillus subtilis in complex with dihydroxyacetone phosphate
Author: p. rezacova, z. otwinowski
Keywords: catabolic repressor, transcriptional regulator, deor family, dna-binding, transcription regulation, gene regulation
- 3bxf.pdb.
gene regulation 13-jan-08 3bxf
Cl
Title: crystal structure of effector binding domain of central glycolytic gene regulator (cggr) from bacillus subtilis in complex with effector fructose-1,6-bisphosphate
Author: p. rezacova, z. otwinowski
Keywords: catabolic repressor, transcriptional regulator, deor family, dna-binding, transcription regulation, gene regulation
- 3bxg.pdb.
gene regulation 13-jan-08 3bxg
Title: crystal structure of effector binding domain of central glycolytic gene regulator (cggr) from bacillus subtilis in complex with glucose-6-phosphate
Author: p. rezacova, z. otwinowski
Keywords: catabolic repressor, transcriptional regulator, deor family, dna-binding, transcription regulation, gene regulation
- 3bxh.pdb.
gene regulation 13-jan-08 3bxh
Title: crystal structure of effector binding domain of central glycolytic gene regulator (cggr) from bacillus subtilis in complex with fructose-6-phosphate
Author: p. rezacova, z. otwinowski
Keywords: catabolic repressor, transcriptional regulator, deor family, dna-binding, transcription regulation, gene regulation
- 3bxz.pdb.
transport protein 15-jan-08 3bxz
Mg
Title: crystal structure of the isolated dead motor domains from escherichia coli seca
Author: s. nithianantham, s. namjoshi, b. h. shilton
Keywords: translocation, crystal structure, dead motor domains, closed conformation, nucleotide-binding, atp-binding, membrane, transport protein
- 3bym.pdb.
transferase 16-jan-08 3bym
Title: x-ray co-crystal structure aminobenzimidazole triazine 1 bound to lck
Author: x. huang
Keywords: phosphoprotein, proto- oncogene, sh2 domain, sh3 domain, transferase, tyrosine- protein kinase
- 3bys.pdb.
transferase 16-jan-08 3bys
F
Title: co-crystal structure of lck and aminopyrimidine amide 10b
Author: x. huang
Keywords: phosphoprotein, proto- oncogene, sh2 domain, sh3 domain, transferase, tyrosine- protein kinase
- 3byu.pdb.
transferase 16-jan-08 3byu
F
Title: co-crystal structure of lck and aminopyrimidine reverse amide 23
Author: x. huang
Keywords: phosphoprotein, proto- oncogene, sh2 domain, sh3 domain, transferase, tyrosine- protein kinase
- 3c1d.pdb.
recombination, dna binding protein 23-jan-08 3c1d
Title: x-ray crystal structure of recx
Author: s. ragone, j. d. maman, n. furnham, l. pellegrini
Keywords: helix-turn-helix, cytoplasm, dna damage, dna repair, sos response, dna binding protein, recombination
- 3c37.pdb.
hydrolase 27-jan-08 3c37
Zn Se
Title: x-ray structure of the putative zn-dependent peptidase q74d82 at the resolution 1.7 a. northeast structural genomics consortium target gsr143a
Author: a. p. kuzin, y. chen, j. seetharaman, s. m. vorobiev, f. forouhar, d. wang, l. mao, m. maglaqui, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: q74d82, gsr143a, peptidase, m48 family, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, hydrolase, metalloprotease, protease, zinc
- 3c5j.pdb.
membrane protein 31-jan-08 3c5j
Title: crystal structure of hla dr52c
Author: s. dai, j. w. kappler
Keywords: protein biosynthesis, membrane protein
- 3c87.pdb.
hydrolase 11-feb-08 3c87
Na Se
Title: crystal structure of the enterobactin esterase fes from shigella flexneri in the presence of enterobactin
Author: y. kim, n. maltseva, r. abergel, k. raymond, d. holzle, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: irod, alpha-beta-alpha sandwich, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, hydrolase
- 3c8d.pdb.
hydrolase 11-feb-08 3c8d
Title: crystal structure of the enterobactin esterase fes from shigella flexneri in the presence of 2,3-di-hydroxy-n- benzoyl-glycine
Author: y. kim, n. maltseva, r. abergel, d. holzle, k. raymond, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: irod, iron aquisition, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, hydrolase
- 3c8h.pdb.
hydrolase 12-feb-08 3c8h
Se
Title: crystal structure of the enterobactin esterase fes from shigella flexneri in the presence of 2,3-di-hydroxy-n- benzoyl-serine
Author: y. kim, n. maltseva, r. abergel, d. holzle, k. raymond, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: irod, iron aquisition, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, hydrolase
- 3c9g.pdb.
nucleotide binding protein 15-feb-08 3c9g
Title: crystal structure of uncharacterized upf0201 protein af_135
Author: r. sugadev, s. ozyurt, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: structural genomics, psi-ii, dimer, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, atp- binding, nucleotide-binding, nucleotide binding protein
- 3cax.pdb.
structural genomics, unknown function 20-feb-08 3cax
Title: crystal structure of uncharacterized protein pf0695
Author: u. a. ramagopal, s. hu, r. toro, m. gilmore, k. bain, a. j. meyer, l. rodgers, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: unknown function, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3cdc.pdb.
immune system 26-feb-08 3cdc
Title: ki o18/o8 n34i/y87h immunoglobulin light chain variable domain
Author: e. m. baden, e. g. randles, j. r. thompson, m. ramirez-alvarado
Keywords: amyloid, immunoglobulin, light chain, variable domain, immune system
- 3cdf.pdb.
immune system 26-feb-08 3cdf
Title: ki o18/o8 y87h immunoglobulin light chain variable domain
Author: e. m. baden, e. g. randles, j. r. thompson, m. ramirez-alvarado
Keywords: amyloid, immunoglobulin, light chain, variable domain, immune system
- 3cdy.pdb.
immune system 27-feb-08 3cdy
Title: al-09 h87y, immuglobulin light chain variable domain
Author: e. m. baden, e. g. randles, a. k. aboagye, j. r. thompson, m. ramirez- alvarado
Keywords: immunoglobulin, light chain, variable domain, amyloidosis, immune system
- 3ce2.pdb.
structural genomics, unknown function 28-feb-08 3ce2
Zn
Title: crystal structure of putative peptidase from chlamydophila abortus
Author: u. a. ramagopal, r. toro, m. gilmore, m. eberle, m. maletic, a. j. meyer, l. rodgers, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: unknown function, putative peptidase, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3ce6.pdb.
hydrolase 28-feb-08 3ce6
Title: crystal structure of mycobacterium tuberculosis s-adenosyl- l-homocysteine hydrolase in ternary complex with nad and adenosine
Author: m. c. m. reddy, k. gokulan, n. d. shetty, j. l. owen, t. r. ioerger, j. c. sacchettini
Keywords: dimer of dimers, nad binding domain, 37 amino acid insertional region, cytoplasm, hydrolase, one-carbon metabolism
- 3cfy.pdb.
structural genomics, unknown function 04-mar-08 3cfy
Title: crystal structure of signal receiver domain of putative luxo repressor protein from vibrio parahaemolyticus
Author: y. patskovsky, u. a. ramagopal, r. fong, j. freeman, m. iizuka, c. groshong, d. smith, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: dna-binding, nucleotide-binding, transcription, transcription regulation
- 3cg0.pdb.
lyase 04-mar-08 3cg0
Title: crystal structure of signal receiver domain of modulated diguanylate cyclase from desulfovibrio desulfuricans g20, an example of alternate folding
Author: y. patskovsky, j. b. bonanno, r. romero, m. gilmore, s. chang, c. groshong, j. koss, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: diguanylate cyclase, protein structure initiative, psi-2, new york sgx research center for structural genomics, nysgxrc, structural genomics, lyase
- 3cih.pdb.
hydrolase 11-mar-08 3cih
Se
Title: crystal structure of a putative alpha-rhamnosidase from bacteroides thetaiotaomicron
Author: d. kumaran, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: protein structure initiative ii, nysgxrc, 12028b, (alpha/alpha)6 barrel domain, beta sandwich domain, glycoside, biosurfactans, psi-2, new york sgx research center for structural genomics, hydrolase
- 3cjp.pdb.
hydrolase 13-mar-08 3cjp
Zn
Title: crystal structure of an uncharacterized amidohydrolase cac3332 from clostridium acetobutylicum
Author: v. n. malashkevich, r. toro, u. a. ramagopal, j. b. bonanno, a. meyer, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: crystal structure, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, amidohydrolase, cac3332, psi-2
- 3ck5.pdb.
isomerase 14-mar-08 3ck5
Mg Se
Title: crystal structure of a racemase from streptomyces coelicolor a3(2) with bound magnesium
Author: k. n. rao, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: racemase, magnesium, streptomyces coelicolor a3(2), 9301a, structural genomics, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, isomerase
- 3ckd.pdb.
ligase 14-mar-08 3ckd
Se
Title: crystal structure of the c-terminal domain of the shigella type iii effector ipah
Author: r. lam, a. u. singer, m. e. cuff, t. skarina, o. kagan, r. dileo, a. m. edwards, a. joachimiak, a. savchenko, midwest center for structural genomics (mcsg)
Keywords: helical, type iii effector, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, plasmid
- 3ckw.pdb.
transferase 17-mar-08 3ckw
Hg
Title: crystal structure of sterile 20-like kinase 3 (mst3, stk24)
Author: s. s. antonysamy, s. k. burley, s. buchanan, f. chau, i. feil, l. wu, j. m. sauder, new york sgx research center for structural genomics (nysgxrc)
Keywords: nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase
- 3ckx.pdb.
transferase 17-mar-08 3ckx
Title: crystal structure of sterile 20-like kinase 3 (mst3, stk24) in complex with staurosporine
Author: s. s. antonysamy, s. k. burley, s. buchanan, f. chau, i. feil, l. wu, j. m. sauder, new york sgx research center for structural genomics (nysgxrc)
Keywords: atp-binding, cytoplasm, nucleotide-binding, phosphoprotein, serine/threonine-protein kinase, transferase
- 3clk.pdb.
transcription regulator 19-mar-08 3clk
Se
Title: crystal structure of a transcription regulator from lactobacillus plantarum
Author: r. sugadev, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: transcription regulator
- 3clw.pdb.
structural genomics, unknown function 20-mar-08 3clw
Title: crystal structure of conserved exported protein from bacteroides fragilis
Author: j. b. bonanno, m. rutter, k. t. bain, s. chang, k. ozyurt, d. smith, s. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: unknown function, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3clx.pdb.
ligase, apoptosis 20-mar-08 3clx
Zn
Title: crystal structure of xiap bir3 domain in complex with a smac-mimetic compound, smac005
Author: m. milani, e. mastrangelo, f. cossu
Keywords: apoptosis, cytoplasm, ligase, metal-binding, phosphoprotein, polymorphism, protease inhibitor, thiol protease inhibitor, ubl conjugation, ubl conjugation pathway
- 3cm2.pdb.
ligase, apoptosis 20-mar-08 3cm2
Zn
Title: crystal structure of xiap bir3 domain in complex with a smac-mimetic compound, smac010
Author: f. cossu, e. mastrangelo, m. milani
Keywords: apoptosis, cytoplasm, ligase, metal-binding, phosphoprotein, polymorphism, protease inhibitor, thiol protease inhibitor, ubl conjugation, ubl conjugation pathway
- 3cm7.pdb.
ligase, apoptosis 21-mar-08 3cm7
Zn
Title: crystal structure of xiap-bir3 domain in complex with smac- mimetic compuond, smac005
Author: e. mastrangelo, f. cossu, m. milani
Keywords: apoptosis, cytoplasm, ligase, metal-binding, phosphoprotein, polymorphism, protease inhibitor, thiol protease inhibitor, ubl conjugation, ubl conjugation pathway
- 3cmg.pdb.
hydrolase 21-mar-08 3cmg
Cl
Title: crystal structure of putative beta-galactosidase from bacteroides fragilis
Author: u. a. ramagopal, m. rutter, r. toro, s. hu, m. maletic, t. gheyi, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: putative beta-galactosidase, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, hydrolase
- 3cmn.pdb.
hydrolase 24-mar-08 3cmn
Title: crystal structure of a putative hydrolase with a novel fold from chloroflexus aurantiacus
Author: r. agarwal, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: nysgxrc, putative hydrolase, apoenzyme, helical protein, 10492m, structural genomics, protein structure initiative, new york sgx research center for structural genomics
- 3cmq.pdb.
ligase 24-mar-08 3cmq
Mg
Title: crystal structure of human mitochondrial phenylalanine trna synthetase
Author: l. klipcan, il levin, n. kessler, n. moor, i. finarov, m. safro
Keywords: rrm domain, trna, rna recogntion, aminoacyl-trna synthetase, atp-binding, ligase, mitochondrion, nucleotide-binding, protein biosynthesis, transit peptide
- 3cnb.pdb.
dna binding protein 25-mar-08 3cnb
Title: crystal structure of signal receiver domain of dna binding response regulator protein (merr) from colwellia psychrerythraea 34h
Author: y. patskovsky, r. romero, j. freeman, s. hu, c. groshong, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: dna binding protein, protein structure initiative, psi-2, new york sgx research center for structural genomics, nysgxrc, structural genomics, dna- binding
- 3co4.pdb.
hydrolase 27-mar-08 3co4
Se
Title: crystal structure of a chitinase from bacteroides thetaiotaomicron
Author: l. damodharan, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: tim-barrel, 11092m, structural genomics, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, glycosidase, hydrolase
- 3co8.pdb.
isomerase 27-mar-08 3co8
Se
Title: crystal structure of alanine racemase from oenococcus oeni
Author: k. palani, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: alanine racemase, protein structure initiative ii, psi-ii, nysgxrc, 11082i, plp, tim barrel, structural genomics, new york sgx research center for structural genomics, isomerase, pyridoxal phosphate
- 3coi.pdb.
transferase 28-mar-08 3coi
Title: crystal structure of p38delta kinase
Author: s. atwell, s. k. burley, a. houle, a. ramos, j. m. sauder, new york sgx research center for structural genomics (nysgxrc)
Keywords: nysgxrc, atp-binding, cell cycle, nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase
- 3cok.pdb.
transferase 28-mar-08 3cok
Title: crystal structure of plk4 kinase
Author: s. atwell, s. k. burley, a. houle, b. leon, l. a. pelletier, j. m. sauder, new york sgx research center for structural genomics (nysgxrc)
Keywords: polymorphism, serine/threonine-protein kinase, transferase
- 3com.pdb.
transferase 28-mar-08 3com
Title: crystal structure of mst1 kinase
Author: s. atwell, s. k. burley, m. dickey, b. leon, j. m. sauder, new york sgx research center for structural genomics (nysgxrc)
Keywords: apoptosis, atp- binding, coiled coil, cytoplasm, magnesium, metal-binding, nucleotide-binding, nucleus, phosphoprotein, polymorphism, transferase
- 3cpg.pdb.
structural genomics, unknown function 31-mar-08 3cpg
Se
Title: crystal structure of an unknown protein from bifidobacterium adolescentis
Author: r. sugadev, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: tim barrel, 11083b, monomer, structural genomics, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, unknown function
- 3cpl.pdb.
immune system 31-mar-08 3cpl
Title: crystal structure of h-2db in complex with a variant m6a of the np366 peptide from influenza a virus
Author: k. kedzierska, c. guillonneau, l. a. hatton, d. stockwell, s. gras, r. webby, j. rossjohn, a. w. purcell, p. c. doherty, s. j. turner
Keywords: crystal structure, influenza, np366, immunology, glycoprotein, immune response, membrane, mhc i, transmembrane, immunoglobulin domain, polymorphism, secreted, immune system
- 3cqx.pdb.
chaperone 03-apr-08 3cqx
Na
Title: chaperone complex
Author: z. xu, j. c. nix, s. misra
Keywords: atp-binding, chaperone, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, stress response, coiled coil
- 3cr3.pdb.
transferase 04-apr-08 3cr3
Mg Se
Title: structure of a transient complex between dha-kinase subunits dham and dhal from lactococcus lactis
Author: j. m. jeckelmann, a. zurbriggen, s. christen, u. baumann, b. erni
Keywords: atp-binding, glycerol metabolism, nucleotide-binding, phosphotransferase system
- 3crn.pdb.
signaling protein 07-apr-08 3crn
Na Se
Title: crystal structure of response regulator receiver domain protein (chey-like) from methanospirillum hungatei jf-1
Author: r. l. hiner, r. toro, y. patskovsky, j. freeman, s. chang, d. smith, c. groshong, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: signal regulator receiver domain, protein structure initiative, psi-2, new york sgx research center for structural genomics, nysgxrc, signaling protein
- 3cs3.pdb.
transcription regulator 08-apr-08 3cs3
Title: crystal structure of sugar-binding transcriptional regulator (laci family) from enterococcus faecalis
Author: y. patskovsky, r. romero, j. freeman, m. iizuka, c. groshong, d. smith, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: transcription regulator
- 3ct2.pdb.
isomerase 11-apr-08 3ct2
Mg
Title: crystal structure of muconate cycloisomerase from pseudomonas fluorescens
Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: target 9450f, mle, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, isomerase
- 3ct4.pdb.
transferase 11-apr-08 3ct4
Title: structure of dha-kinase subunit dhak from l. lactis
Author: j. m. jeckelmann, a. zurbriggen, s. christen, u. baumann, b. erni
Keywords: dihydroxyacetone kinase subunit, tranferase, covalently linked 2ha, glycerol metabolism, transferase
- 3ctd.pdb.
structural genomics, unknown function 11-apr-08 3ctd
Title: crystal structure of a putative aaa family atpase from prochlorococcus marinus subsp. pastoris
Author: j. b. bonanno, m. rutter, k. t. bain, c. lau, s. ozyurt, d. smith, s. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: unknown function, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, atp-binding, nucleotide- binding
- 3ctp.pdb.
transcription regulator 14-apr-08 3ctp
Na
Title: crystal structure of periplasmic binding protein/laci transcriptional regulator from alkaliphilus metalliredigens qymf complexed with d-xylulofuranose
Author: v. n. malashkevich, r. toro, s. r. wasserman, a. meyer, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: transcription regulation, transcription regulator, psi-2
- 3cu4.pdb.
electron transport 15-apr-08 3cu4
Fe
Title: omcf, outer membrance cytochrome f from geobacter sulfurreducens
Author: p. r. pokkuluri, m. schiffer
Keywords: geobacter sulfurreducens, monoheme cytochrome, electron transport
- 3cu5.pdb.
transcription regulator 15-apr-08 3cu5
Title: crystal structure of a two component transcriptional regulator arac from clostridium phytofermentans isdg
Author: v. n. malashkevich, r. toro, s. r. wasserman, a. meyer, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: crystal structure, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, transcriptional regulator, arac, transcription regulator, psi-2
- 3cvg.pdb.
metal binding protein 18-apr-08 3cvg
Ca Se
Title: crystal structure of a periplasmic putative metal binding protein
Author: r. agarwal, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: psi-ii, nysgxrc, periplasmic, metal binding, structural genomics, protein structure initiative, new york sgx research center for structural genomics, metal binding protein
- 3cvh.pdb.
immune system 18-apr-08 3cvh
Title: how tcr-like antibody recognizes mhc-bound peptide
Author: t. mareeva, e. martinez-hackert, y. sykulev
Keywords: tcr, glycoprotein, immune response, membrane, mhc i, transmembrane, acetylation, allergen, phosphoprotein, polymorphism, secreted, immunoglobulin domain, immune system
- 3cvi.pdb.
immune system 18-apr-08 3cvi
Title: how tcr-like antibody recognizes mhc-bound peptide
Author: t. mareeva, e. martinez-hackert, y. sykulev
Keywords: immune system
- 3cvu.pdb.
lyase/dna 20-apr-08 3cvu
Title: drosophila melanogaster (6-4) photolyase bound to ds dna with a t-t (6-4) photolesion
Author: m. j. maul, t. r. m. barends, a. f. glas, m. j. cryle, i. schlichting, t. carell
Keywords: lyase/dna complex
- 3cvy.pdb.
lyase/dna 20-apr-08 3cvy
Title: drosophila melanogaster (6-4) photolyase bound to repaired ds dna
Author: m. j. maul, t. r. m. barends, a. f. glas, m. j. cryle, i. schlichting, t. carell
Keywords: lyase/dna complex
- 3cwb.pdb.
oxidoreductase 21-apr-08 3cwb
I Fe
Title: chicken cytochrome bc1 complex inhibited by an iodinated analogue of the polyketide crocacin-d
Author: l. huang, t. cromartie, r. viner, p. j. crowley, e. a. berry
Keywords: transport
- 3cwl.pdb.
protease inhibitor 22-apr-08 3cwl
Cl
Title: crystal structure of alpha-1-antitrypsin, crystal form b
Author: c. j. morton, g. hansen, s. c. feil, j. j. adams, m. w. parker
Keywords: blood coagulation
- 3cwm.pdb.
protease inhibitor 22-apr-08 3cwm
Title: crystal structure of alpha-1-antitrypsin complexed with citrate
Author: c. j. morton, g. hansen, s. c. feil, j. j. adams, m. w. parker
Keywords: blood coagulation
- 3cwv.pdb.
isomerase 22-apr-08 3cwv
Title: crystal structure of b-subunit of the dna gyrase from myxococcus xanthus
Author: u. a. ramagopal, r. toro, a. j. meyer, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: unknown function, dna gyrase, b- subunit, atp-binding, isomerase, nucleotide-binding, topoisomerase, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3cwz.pdb.
transport protein 23-apr-08 3cwz
Mg
Title: strucure of rab6(gtp)-r6ip1 complex
Author: r. recacha, a. houdusse, b. goud, a. r. khan
Keywords: er-golgi transport, gtp-binding, methylation, nucleotide- binding, phosphoprotein, prenylation, protein transport, transport, transport protein
- 3cxj.pdb.
structural genomics, unknown function 24-apr-08 3cxj
Se
Title: crystal structure of an uncharacterized protein from methanothermobacter thermautotrophicus
Author: r. sugadev, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: psi-ii, uncharacterized protein, structural genomics, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, unknown function
- 3cyg.pdb.
structural genomics, unknown function 25-apr-08 3cyg
Se
Title: crystal structure of an uncharacterized protein from fervidobacterium nodosum rt17-b1
Author: l. damodharan, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: psi-ii, 10495j, fervibacterium nodosum, structural genomics, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, unknown function
- 3cyj.pdb.
isomerase 25-apr-08 3cyj
Na
Title: crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from rubrobacter xylanophilus
Author: j. b. bonanno, j. freeman, k. t. bain, f. zhang, j. bravo, d. smith, s. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: isomerase, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3cym.pdb.
structural genomics, unknown function 25-apr-08 3cym
Na
Title: crystal structure of protein bad_0989 from bifidobacterium adolescentis
Author: y. patskovsky, s. ozyurt, j. freeman, s. chang, k. bain, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: unknown function, uncharacterized protein, ribonuclease d, exonuclease, protein structure initiative, psi-2, new york sgx research center for structural genomics, nysgxrc
- 3cz5.pdb.
transcription regulator 28-apr-08 3cz5
Title: crystal structure of two-component response regulator, luxr family, from aurantimonas sp. si85-9a1
Author: v. n. malashkevich, r. toro, s. r. wasserman, a. meyer, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: transcription regulation, transcription regulator
- 3cz8.pdb.
hydrolase 28-apr-08 3cz8
Title: crystal structure of putative sporulation-specific glycosylase ydhd from bacillus subtilis
Author: y. patskovsky, r. romero, m. rutter, s. chang, m. maletic, d. smith, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: sporulation
- 3czb.pdb.
structural genomics, unknown function 28-apr-08 3czb
Title: crystal structure of putative transglycosylase from caulobacter crescentus
Author: u. a. ramagopal, k. chattopadhyay, r. toro, s. wasserman, j. freeman, c. logan, k. bain, t. gheyi, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: unknown function, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3czv.pdb.
lyase 30-apr-08 3czv
Zn
Title: crystal structure of the human carbonic anhydrase xiii in complex with acetazolamide
Author: a. di fiore, g. de simone
Keywords: protein-inhibitor complex, lyase, metal- binding, zinc
- 3d0c.pdb.
lyase 01-may-08 3d0c
Se
Title: crystal structure of dihydrodipicolinate synthase from oceanobacillus iheyensis at 1.9 a resolution
Author: l. satyanarayana, s. eswaramoorthy, j. m. sauder, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: pyruvate, tim barrel, nysgxrc, 9375o, psi-2, structural genomics, protein structure initiative, new york sgx research center for structural genomics, lyase
- 3d0n.pdb.
metal binding protein 02-may-08 3d0n
Zn
Title: crystal structure of human carbonic anhydrase xiii
Author: a. di fiore, g. de simone
Keywords: lyase, metal-binding, zinc, metal binding protein
- 3d1e.pdb.
transferase, transcription 05-may-08 3d1e
Title: crystal structure of e. coli sliding clamp (beta) bound to a polymerase ii peptide
Author: r. e. georgescu, o. yurieva, k. seung-sup, j. kuriyan, x-p. kong, m. o'donnell
Keywords: dna polymerase, dna sliding clamp, dna replication, rational drug design, antibiotic target, transferase, transcription
- 3d1f.pdb.
transferase, transcription 05-may-08 3d1f
Title: crystal structure of e. coli sliding clamp (beta) bound to a polymerase iii peptide
Author: r. e. georgescu, o. yurieva, k. seung-sup, j. kuriyan, x-p. kong, m. o'donnell
Keywords: dna polymerase, dna sliding clamp, dna replication, rational drug design, antibiotic target, transferase, transcription
- 3d1g.pdb.
transferase, transcription 05-may-08 3d1g
Br
Title: structure of a small molecule inhibitor bound to a dna sliding clamp
Author: r. e. georgescu, o. yurieva, k. seung-sup, j. kuriyan, x-p. kong, m. o'donnell
Keywords: dna polymerase, dna sliding clamp, dna replication, rational drug design, antibiotic target, transferase, transcription
- 3d3a.pdb.
hydrolase 09-may-08 3d3a
Se
Title: crystal structure of a beta-galactosidase from bacteroides thetaiotaomicron
Author: k. palani, d. kumaran, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: hydrolase
- 3d46.pdb.
lyase 14-may-08 3d46
Mg
Title: crystal structure of l-rhamnonate dehydratase from salmonella typhimurium complexed with mg and l-tartrate
Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: nysgxrc, target 9265a, l-rhamnonate dehydratase, psi-2, protein structure initiative, new york sgx research center for structural genomics, lyase
- 3d47.pdb.
lyase 14-may-08 3d47
Mg
Title: crystal structure of l-rhamnonate dehydratase from salmonella typhimurium complexed with mg and d-malate
Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: nysgxrc, l-rhamnonate dehydratase, target 9265a, psi-2, protein structure initiative, new york sgx research center for structural genomics, lyase
- 3d4c.pdb.
cell adhesion 14-may-08 3d4c
Cd
Title: zp-n domain of mammalian sperm receptor zp3 (crystal form i)
Author: l. jovine, m. monne'
Keywords: immunoglobulin-like fold, glycoprotein, receptor, secreted, transmembrane, cell adhesion
- 3d4g.pdb.
cell adhesion 14-may-08 3d4g
Ca
Title: zp-n domain of mammalian sperm receptor zp3 (crystal form ii)
Author: l. jovine, m. monne'
Keywords: immunoglobulin-like fold, glycoprotein, receptor, secreted, transmembrane, cell adhesion
- 3d5l.pdb.
signaling protein 16-may-08 3d5l
Title: crystal structure of regulatory protein recx
Author: r. agarwal, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: psi-ii, nysgxrc, recx, dna repair, 10123k, structural genomics, protein structure initiative, new york sgx research center for structural genomics, cytoplasm, signaling protein
- 3d5o.pdb.
immune system 16-may-08 3d5o
Title: structural recognition and functional activation of fcrr by innate pentraxins
Author: j. lu, l. l. marnell, k. d. marjon, c. mold, t. w. du clos, p. d. sun
Keywords: phosphoprotein, receptor, transmembrane, immune system
- 3d7r.pdb.
hydrolase 21-may-08 3d7r
Cl Br Na Se
Title: crystal structure of a putative esterase from staphylococcus aureus
Author: r. lam, k. p. battaile, t. chan, v. romanov, k. lam, m. soloveychik, j. wu-brown, e. f. pai, n. y. chirgadze
Keywords: alpha/beta fold, hydrolase
- 3d7s.pdb.
transferase 21-may-08 3d7s
Zn
Title: crystal structure of wild-type e. coli asparate transcarbamoylase at ph 8.5 at 2.80 a resolution
Author: k. a. stieglitz, j. xia, e. r. kantrowitz
Keywords: positively charged channel, apoenzyme, pyrimidine biosynthesis, transferase, metal-binding, zinc
- 3d8w.pdb.
lyase 26-may-08 3d8w
Zn
Title: use of a carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti- cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: anti-cancer, benzolamide, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3da0.pdb.
viral protein 28-may-08 3da0
Title: crystal structure of a cleaved form of a chimeric receptor binding protein from lactococcal phages subspecies tp901-1 and p2
Author: m. i. siponen, s. blangy, s. spinelli, l. vera, c. cambillau, v. campanacci
Keywords: lactococcal phage tp901-1 receptor binding protein, viral protein
- 3dae.pdb.
transferase 29-may-08 3dae
Title: crystal structure of phosphorylated snf1 kinase domain
Author: l. -s. zheng, l. chen, z. -h. jiao, j. -w. wu
Keywords: ampk, snf1, atp-binding, carbohydrate metabolism, membrane, nucleotide-binding, nucleus, phosphoprotein, serine/threonine-protein kinase, transferase
- 3dbh.pdb.
cell cycle 31-may-08 3dbh
Zn
Title: structural dissection of a gating mechanism preventing misactivation of ubiquitin by nedd8's e1 (appbp1- uba3arg190ala-nedd8ala72arg)
Author: j. souphron, b. a. schulman
Keywords: activating enzyme, apoptosis, membrane, ubl conjugation pathway, atp-binding, ligase, nucleotide- binding, polymorphism, nucleus
- 3dbi.pdb.
transcription regulator 01-jun-08 3dbi
Se
Title: crystal structure of sugar-binding transcriptional regulator (laci family) from escherichia coli complexed with phosphate
Author: y. patskovsky, s. ozyurt, j. freeman, b. wu, m. maletic, j. koss, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: transcription regulator, repressor, transcription
- 3dbo.pdb.
toxin/antitoxin 02-jun-08 3dbo
Na
Title: crystal structure of a member of the vapbc family of toxin- antitoxin systems, vapbc-5, from mycobacterium tuberculosis
Author: l. miallau, d. cascio, d. eisenberg, integrated center for structure and function innovation (isfi), tb structural genomics consortium (tbsgc)
Keywords: toxin/antitoxin complex
- 3dbx.pdb.
immune system 02-jun-08 3dbx
Title: structure of chicken cd1-2 with bound fatty acid
Author: d. m. zajonc, i. a. wilson
Keywords: pyrrolidone carboxylic acid, secreted, immune system
- 3dc5.pdb.
oxidoreductase 03-jun-08 3dc5
Mn
Title: crystal structure of a manganese superoxide dismutases from caenorhabditis elegans
Author: c. h. trinh, t. hunter, e. e. stewart, s. e. v. phillips, g. j. hunter
Keywords: alpha/beta c domain, oxidoreductase, manganese, metal-binding, mitochondrion, transit peptide
- 3dc6.pdb.
oxidoreductase 03-jun-08 3dc6
Mn
Title: crystal structure of a manganese superoxide dismutases from caenorhabditis elegans
Author: c. h. trinh, t. hunter, e. e. stewart, s. e. v. phillips, g. j. hunter
Keywords: alpha/beta c domain, oxidoreductase, manganese, metal-binding, mitochondrion, transit peptide
- 3dd9.pdb.
ribosome inhibitor 05-jun-08 3dd9
Title: structure of doch66y dimer
Author: a. garcia-pino, r. loris
Keywords: ribosome inhibitor
- 3dda.pdb.
hydrolase 05-jun-08 3dda
Zn
Title: crystal structure of the catalytic domain of botulinum neurotoxin serotype a with a snap-25 peptide
Author: d. kumaran, s. swaminathan
Keywords: alternative splicing, cell junction, coiled coil, lipoprotein, palmitate, phosphoprotein, synapse, synaptosome
- 3ddb.pdb.
hydrolase 05-jun-08 3ddb
Zn
Title: crystal structure of the catalytic domain of botulinum neurotoxin serotype a with a substrate analog peptide
Author: d. kumaran, s. swaminathan
Keywords: botox, catalytic domain, endopeptidase, syntaxin, bio-warfare agent, hydrolase, metal-binding, metalloprotease, protease, secreted, transmembrane, zinc, enzyme-substrate complex, pharmaceutical
- 3ddo.pdb.
transferase 06-jun-08 3ddo
Title: x-ray structure of the uridine phosphorylase from salmonella typhimurium in complex with by phosphate ion at 1.5a resolution
Author: a. a. lashkov, a. m. mikhailov, a. g. gabdoulkhakov
Keywords: cytoplasm, glycosyltransferase
- 3ddz.pdb.
hydrolase 07-jun-08 3ddz
Ca
Title: proteinase k by lb nanotemplate method after the first step of high x-ray dose on esrf id23-1 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: subtilases, hydrolase, calcium, metal-binding, protease, serine protease, zymogen
- 3de0.pdb.
hydrolase 07-jun-08 3de0
Ca
Title: proteinase k by lb nanotemplate method after the second step of high x-ray dose on esrf id23-1 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: subtilases, proteinase k, hydrolase, calcium, metal-binding, protease, serine protease, zymogen
- 3de1.pdb.
hydrolase 07-jun-08 3de1
Ca
Title: proteinase k by lb nanotemplate method after the third step of high x-ray dose on esrf id23-1 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: hydrolase, calcium, metal-binding, protease, serine protease, zymogen
- 3de2.pdb.
hydrolase 07-jun-08 3de2
Ca
Title: proteinase k by lb nanotemplate method after the fourth step of high x-ray dose on esrf id23-1 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: hydrolase, calcium, metal-binding, protease, serine protease, zymogen
- 3de3.pdb.
hydrolase 08-jun-08 3de3
Ca
Title: proteinase k by classical hanging drop method before high x- ray dose on esrf id23-1 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: hydrolase, calcium, metal-binding, protease, serine protease, zymogen
- 3de4.pdb.
hydrolase 08-jun-08 3de4
Ca
Title: proteinase k by classical hanging drop method after the first step of high x-ray dose on esrf id23-1 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: hydrolase, calcium, metal-binding, protease, serine protease, zymogen
- 3de5.pdb.
hydrolase 08-jun-08 3de5
Ca
Title: roteinase k by classical hanging drop method after the second step of high x-ray dose on esrf id23-1 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: hydrolase, calcium, metal-binding, protease, serine protease, zymogen
- 3de6.pdb.
hydrolase 08-jun-08 3de6
Ca
Title: proteinase k by classical hanging drop method after the third step of high x-ray dose on esrf id23-1 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: calcium, hydrolase, metal-binding, protease, serine protease, zymogen
- 3de7.pdb.
hydrolase 08-jun-08 3de7
Ca
Title: proteinase k by classical hanging drop method after the fourth step of high x-ray dose on esrf id23-1 beamline
Author: e. pechkova, s. k. tripathi, c. nicolini
Keywords: hydrolase, calcium, metal-binding, protease, serine protease, zymogen
- 3dec.pdb.
hydrolase 09-jun-08 3dec
K Se
Title: crystal structure of a glycosyl hydrolases family 2 protein from bacteroides thetaiotaomicron
Author: d. kumaran, j. bonanno, r. romero, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: new york sgx research center for structural genomics
- 3df0.pdb.
hydrolase 11-jun-08 3df0
Ca
Title: calcium-dependent complex between m-calpain and calpastatin
Author: t. moldoveanu, k. gehring, d. r. green
Keywords: thiol protease inhibitor
- 3dfj.pdb.
hydrolase 12-jun-08 3dfj
Cl
Title: crystal structure of human prostasin
Author: h. p. su, k. w. rickert, p. l. darke, s. k. munshi
Keywords: serine protease, glycoprotein, hydrolase, membrane, secreted, transmembrane, zymogen
- 3dfl.pdb.
hydrolase 12-jun-08 3dfl
Title: crystal structure of human prostasin complexed to 4- guanidinobenzoic acid
Author: h. p. su, k. w. rickert, p. l. darke, s. k. munshi
Keywords: serine protease, glycoprotein, hydrolase, membrane, secreted, transmembrane, zymogen
- 3dhy.pdb.
hydrolase 19-jun-08 3dhy
Title: crystal structures of mycobacterium tuberculosis s-adenosyl- l-homocysteine hydrolase in ternary complex with substrate and inhibitors
Author: n. d. shetty, t. r. ioerger, k. gokulan, m. c. m. reddy, j. l. owen, j. c. sacchettini, tb structural genomics consortium (tbsgc)
Keywords: cytoplasm, hydrolase, nad, one-carbon metabolism
- 3din.pdb.
membrane protein, protein transport 20-jun-08 3din
Mg F Be
Title: crystal structure of the protein-translocation complex formed by the secy channel and the seca atpase
Author: j. zimmer, y. nam, t. a. rapoport
Keywords: membrane protein, atpase, atp- binding, cytoplasm, inner membrane, nucleotide-binding, protein transport, transport, transmembrane
- 3dkv.pdb.
transferase 26-jun-08 3dkv
Mg Zn
Title: crystal structure of adenylate kinase variant aklse1
Author: r. m. bannen, c. m. bianchetti, c. b. bingman, e. b. bitto
Keywords: zinc coordination, atp-binding, cytoplasm, kinase, metal-binding, nucleotide biosynthesis, nucleotide-binding
- 3dl0.pdb.
transferase 26-jun-08 3dl0
Mg Zn
Title: crystal structure of adenylate kinase variant aklse3
Author: r. m. bannen, c. m. bianchetti, c. b. bingman, j. g. mccoy
Keywords: zinc coordination, atp-binding, cytoplasm, kinase, metal-binding, nucleotide biosynthesis, nucleotide-binding
- 3dlb.pdb.
nucleic acid binding protein/dna 26-jun-08 3dlb
Title: crystal structure of the guide-strand-containing argonaute protein silencing complex
Author: y. wang, g. sheng, d. j. patel
Keywords: protein-dna complex, plasmid, nucleic acid binding protein/dna complex
- 3dlh.pdb.
nucleic acid binding protein/dna 27-jun-08 3dlh
Mg
Title: crystal structure of the guide-strand-containing argonaute protein silencing complex
Author: y. wang, g. sheng, d. j. patel
Keywords: protein-dna complex, plasmid, nucleic acid binding protein/dna complex
- 3dmv.pdb.
hydrolase 01-jul-08 3dmv
Cl
Title: free of ligand binding in the hydrophobic cavity of t4 lysozyme l99a mutant
Author: l. liu, b. w. matthews
Keywords: halogen bond, cavity, halogenated benzene, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase
- 3dmz.pdb.
hydrolase 01-jul-08 3dmz
Cl F
Title: hexafluorobenzene binding in the hydrophobic cavity of t4 lysozyme l99a mutant
Author: l. liu, b. w. matthews
Keywords: halogen bond, hydrophobic cavity, halogenated benzene, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase
- 3dn0.pdb.
hydrolase 01-jul-08 3dn0
Cl F
Title: pentafluorobenzene binding in the hydrophobic cavity of t4 lysozyme l99a mutant
Author: l. liu, b. w. matthews
Keywords: halogen bond, hydrophobic cavity, halogenated benzene, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase
- 3dn1.pdb.
hydrolase 01-jul-08 3dn1
Cl F
Title: chloropentafluorobenzene binding in the hydrophobic cavity of t4 lysozyme l99a mutant
Author: l. liu, b. w. matthews
Keywords: halogen bond, hydrophobic cavity, halogenated benzene, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase
- 3dn2.pdb.
hydrolase 01-jul-08 3dn2
F Br
Title: bromopentafluorobenzene binding in the hydrophobic cavity of t4 lysozyme l99a mutant
Author: l. liu, b. w. matthews
Keywords: halogen bond, hydrophobic cavity, halogenated benzene, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase
- 3dn3.pdb.
hydrolase 01-jul-08 3dn3
F I
Title: iodopentafluorobenzene binding in the hydrophobic cavity of t4 lysozyme l99a mutant
Author: l. liu, b. w. matthews
Keywords: halogen bond, hydrophobic cavity, halogenated benzene, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase
- 3dn4.pdb.
hydrolase 01-jul-08 3dn4
I
Title: iodobenzene binding in the hydrophobic cavity of t4 lysozyme l99a mutant
Author: l. liu, b. w. matthews
Keywords: halogen bond, hydrophobic cavity, halogenated benzene, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase
- 3dn6.pdb.
hydrolase 01-jul-08 3dn6
Cl F
Title: 1,3,5-trifluoro-2,4,6-trichlorobenzene binding in the hydrophobic cavity of t4 lysozyme l99a mutant
Author: l. liu, b. w. matthews
Keywords: halogen bond, hydrophobic cavity, halogenated benzene, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase
- 3dn8.pdb.
hydrolase 01-jul-08 3dn8
Cl F I Se
Title: iodopentafluorobenzene binding in the hydrophobic cavity of t4 lysozyme l99a mutant (seleno version)
Author: l. liu, b. w. matthews
Keywords: halogen bond, hydrophobic cavity, halogenated benzene, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase
- 3dna.pdb.
hydrolase 01-jul-08 3dna
Cl I Se
Title: iodobenzene binding in the hydrophobic cavity of t4 lysozyme l99a mutant (seleno version)
Author: l. liu, b. w. matthews
Keywords: halogen bond, hydrophobic cavity, halogenated benzene, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase
- 3doe.pdb.
signaling protein/hydrolase 04-jul-08 3doe
Mg
Title: complex of arl2 and bart, crystal form 1
Author: t. zhang, s. li, j. ding
Keywords: signaling protein/hydrolase complex
- 3dof.pdb.
signaling protein/hydrolase 04-jul-08 3dof
Mg
Title: complex of arl2 and bart, crystal form 2
Author: t. zhang, s. li, j. ding
Keywords: signaling protein/hydrolase complex
- 3dv7.pdb.
lyase 18-jul-08 3dv7
Zn
Title: role of hydrophilic residues in proton transfer during catalysis by human carbonic anhydrase ii (n62a)
Author: b. s. avvaru
Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
- 3dvb.pdb.
lyase 18-jul-08 3dvb
Zn
Title: x-ray crystal structure of mutant n62v human carbonic anhydrase ii
Author: b. s. avvaru
Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
- 3dvc.pdb.
lyase 18-jul-08 3dvc
Zn
Title: x-ray crystal structure of mutant n62t of human carbonic anhydrase ii
Author: b. s. avvaru
Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
- 3dvd.pdb.
lyase 18-jul-08 3dvd
Zn
Title: x-ray crystal structure of mutant n62d of human carbonic anhydrase ii
Author: b. s. avvaru
Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
- 3dwh.pdb.
ligase 22-jul-08 3dwh
Title: structural and functional analysis of sra domain
Author: c. qian, j. jakoncic, m. zhou
Keywords: zinc-finger
- 3dwj.pdb.
oxidoreductase 22-jul-08 3dwj
Fe
Title: heme-proximal w188h mutant of inducible nitric oxide synthase
Author: j. tejero, a. biswas, z. -q. wang, m. m. haque, c. hemann, j. l. zweier, r. c. page, s. misra, d. j. stuehr
Keywords: oxidoreductase, heme, pterin, dimer, nos, calmodulin-binding, fad, fmn, iron, metal- binding, nadp, polymorphism, zinc
- 3dx5.pdb.
lyase 23-jul-08 3dx5
Cl Mn Se
Title: crystal structure of the probable 3-dhs dehydratase asbf involved in the petrobactin synthesis from bacillus anthracis
Author: y. kim, n. maltseva, l. stols, w. eschenfeldt, b. f. pfleger, d. h. sherman, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: petrobactin synthesis, asb locus, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function, lyase
- 3dxb.pdb.
splicing, transcription 24-jul-08 3dxb
Cl
Title: structure of the uhm domain of puf60 fused to thioredoxin
Author: l. corsini, m. hothorn, k. scheffzek, g. stier, m. sattler
Keywords: alternative splicing, fbp interacting repressor, uhm, rrm, electron transport, redox-active center, transport, transcription
- 3dyc.pdb.
hydrolase 25-jul-08 3dyc
Zn
Title: structure of e322y alkaline phosphatase in complex with inorganic phosphate
Author: j. g. zalatan, t. d. fenn, d. herschlag
Keywords: hydrolase, magnesium, metal-binding, periplasm, phosphoprotein, zinc
- 3dym.pdb.
hydrolase 28-jul-08 3dym
Mg Na
Title: e. coli (lacz) beta-galactosidase (h418e)
Author: d. h. juers, r. e. huber, b. w. matthews
Keywords: glycosidase, hydrolase
- 3dyo.pdb.
hydrolase 28-jul-08 3dyo
Mg Na
Title: e. coli (lacz) beta-galactosidase (h418n) in complex with iptg
Author: d. h. juers, r. e. huber, b. w. matthews
Keywords: glycosidase, hydrolase
- 3dyp.pdb.
hydrolase 28-jul-08 3dyp
Mg Na
Title: e. coli (lacz) beta-galactosidase (h418n)
Author: d. h. juers, r. e. huber, b. w. matthews
Keywords: glycosidase, hydrolase
- 3dzd.pdb.
transcription regulator 29-jul-08 3dzd
Na Se
Title: crystal structure of sigma54 activator ntrc4 in the inactive state
Author: j. d. batchelor, m. doucleff, c. -j. lee, k. matsubara, s. de carlo, j. heideker, m. m. lamers, j. g. pelton, d. e. wemmer
Keywords: aaa+ atpase, response regulator, transcriptional activator, atp-binding, nucleotide-binding, transcription, transcription regulation, transcription regulator
- 3e1f.pdb.
hydrolase 04-aug-08 3e1f
Mg Na
Title: "e.coli (lacz) beta-galactosidase (h418e) in complex with galactose"
Author: r. e. huber, m. l. dugdale
Keywords: glycosidase, hydrolase
- 3e1w.pdb.
lyase 04-aug-08 3e1w
Zn
Title: h. influenzae beta-carbonic anhydrase, variant d44n in 100 mm sodium bicarbonate
Author: r. s. rowlett
Keywords: active site mutant, lyase, metal- binding, zinc
- 3e29.pdb.
structural genomics, unknown function 05-aug-08 3e29
Se
Title: x-ray structure of the protein q7we92_borbr from thioesterase superfamily. northeast structural genomics consortium target bor214a.
Author: a. p. kuzin, y. chen, j. setharaman, d. wang, l. mao, e. l. foote, r. xiao, r. nair, j. k. everett, t. b. acton, b. rost, g. t. montelione, l. tong, j. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, unknown function
- 3e4e.pdb.
oxidoreductase 11-aug-08 3e4e
Fe
Title: human cytochrome p450 2e1 in complex with the inhibitor 4- methylpyrazole
Author: k. m. meneely, p. r. porubsky, e. e. scott
Keywords: p450 2e1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane, metal-binding, microsome
- 3e5h.pdb.
signaling protein 13-aug-08 3e5h
Mg
Title: crystal structure of rab28 gtpase in the active (gppnhp- bound) form
Author: s. h. lee, k. baek, y. li, r. dominguez
Keywords: signaling protein, alternative splicing, cell membrane, gtp-binding, lipoprotein, membrane, nucleotide- binding, prenylation
- 3e5t.pdb.
fluorescent protein 14-aug-08 3e5t
Title: crystal structure analysis of fp611
Author: h. nar, k. nienhaus, u. nienhaus, j. wiedenmann
Keywords: luminescence, photoprotein, red fluorescent protein
- 3e5v.pdb.
fluorescent protein 14-aug-08 3e5v
Title: crystal structure analysis of eqfp611 double mutant t122r, n143s
Author: h. nar, k. nienhaus, u. nienhaus, j. wiedenmann
Keywords: luminescence, photoprotein, d2rfp630, cis-trans isomer, red fluorescent protein
- 3e5w.pdb.
fluorescent protein 14-aug-08 3e5w
Title: crystal structure analysis of fp611
Author: k. nienhaus, h. nar, r. heilker, j. wiedenmann, g. u. nienhaus
Keywords: luminescence, photoprotein, rfp639, eqfp611, cis trans isomer, red fluorescent protein
- 3e62.pdb.
transferase 14-aug-08 3e62
Br
Title: fragment based discovery of jak-2 inhibitors
Author: f. park
Keywords: tyrosine-protein kinase
- 3e63.pdb.
transferase 14-aug-08 3e63
Title: fragment based discovery of jak-2 inhibitors
Author: s. s. antonysamy
Keywords: tyrosine-protein kinase
- 3e64.pdb.
transferase 14-aug-08 3e64
Title: fragment based discovery of jak-2 inhibitors
Author: s. s. antonysamy
Keywords: tyrosine-protein kinase
- 3e6i.pdb.
oxidoreductase 15-aug-08 3e6i
Fe
Title: human cytochrome p450 2e1 in complex with the inhibitor indazole
Author: p. r. porubsky, k. m. meneely, e. e. scott
Keywords: p450 2e1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane, metal-binding, microsome
- 3e6p.pdb.
hydrolase 15-aug-08 3e6p
Na
Title: crystal structure of human meizothrombin desf1
Author: m. e. papaconstantinou, p. gandhi, z. chen, a. bah, e. di cera
Keywords: kringle, pharmaceutical, polymorphism, protease, secreted, serine protease, zymogen
- 3e78.pdb.
tpp binding protein 18-aug-08 3e78
Cl Ca
Title: structure determination of the cancer-associated mycoplasma hyorhinis protein mh-p37
Author: k. h. sippel, a. h. robbins, r. reutzel, j. domsic, r. mckenna
Keywords: p37, tpp, cell membrane, lipoprotein, membrane, palmitate, transport, tpp binding protein
- 3e79.pdb.
tpp binding protein 18-aug-08 3e79
Cl I Ca
Title: structure determination of the cancer-associated mycoplasma hyorhinis protein mh-p37
Author: k. h. sippel, a. h. robbins, r. reutzel, j. domsic, r. mckenna
Keywords: p37, tpp, cell membrane, lipoprotein, membrane, palmitate, transport, tpp binding protein
- 3e7c.pdb.
transcription 18-aug-08 3e7c
Cl F
Title: glucocorticoid receptor lbd bound to gsk866
Author: k. p. madauss, s. p. williams, i. mclay, e. l. stewart, r. k. bledsoe
Keywords: phosphoprotein, polymorphism, pseudohermaphroditism, receptor, steroid-binding, transcription, transcription regulation, ubl conjugation, zinc, zinc-finger, activator
- 3e7i.pdb.
oxidoreductase 18-aug-08 3e7i
F Zn Fe
Title: structure of murine inos oxygenase domain with inhibitor ar- c94864
Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
- 3e7l.pdb.
transcription regulator 18-aug-08 3e7l
Zn
Title: crystal structure of sigma54 activator ntrc4's dna binding domain
Author: j. d. batchelor, m. doucleff, c. -j. lee, k. matsubara, s. de carlo, j. heideker, m. m. lamers, j. g. pelton, d. e. wemmer
Keywords: aaa+ atpase, response regulator, transcriptional activator, atp-binding, nucleotide-binding, transcription, transcription regulator
- 3e7m.pdb.
oxidoreductase 18-aug-08 3e7m
Zn Fe
Title: structure of murine inos oxygenase domain with inhibitor ar- c95791
Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
- 3e7r.pdb.
antimicrobial protein 18-aug-08 3e7r
Title: x-ray crystal structure of racemic plectasin
Author: k. mandal, b. l. pentelute, v. tereshko, a. a. kossiakoff, s. b. h. kent
Keywords: racemic protein crystallography, antibiotic, antimicrobial, cleavage on pair of basic residues, defensin, pharmaceutical, secreted, antimicrobial protein
- 3e7s.pdb.
oxidoreductase 18-aug-08 3e7s
Zn Fe As
Title: structure of bovine enos oxygenase domain with inhibitor ar- c95791
Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
- 3e7t.pdb.
oxidoreductase 18-aug-08 3e7t
F Fe
Title: structure of murine inos oxygenase domain with inhibitor ar- c102222
Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
- 3e7u.pdb.
antimicrobial protein 18-aug-08 3e7u
Title: x-ray crystal structure of l-plectasin
Author: k. mandal, b. l. pentelute, v. tereshko, a. a. kossiakoff, s. b. h. kent
Keywords: molecular replacement, antibiotic, antimicrobial, cleavage on pair of basic residues, defensin, pharmaceutical, secreted, antimicrobial protein
- 3e81.pdb.
transferase 19-aug-08 3e81
Mg V
Title: structure-function analysis of 2-keto-3-deoxy-d-glycero-d- galacto-nononate-9-phosphate (kdn) phosphatase defines a new clad within the type c0 had subfamily
Author: z. lu, l. wang, d. dunaway-mariano, k. n. allen
Keywords: nucleotidyltransferase, transferase
- 3e84.pdb.
transferase 19-aug-08 3e84
Mg W
Title: structure-function analysis of 2-keto-3-deoxy-d-glycero-d- galacto-nononate-9-phosphate (kdn) phosphatase defines a new clad within the type c0 had subfamily
Author: z. lu, l. wang, d. dunaway-mariano, k. n. allen
Keywords: nucleotidyltransferase, transferase
- 3e8m.pdb.
transferase 20-aug-08 3e8m
Cl Mg
Title: structure-function analysis of 2-keto-3-deoxy-d-glycero-d- galacto-nononate-9-phosphate (kdn) phosphatase defines a new clad within the type c0 had subfamily
Author: z. lu, l. wang, d. dunaway-mariano, k. n. allen
Keywords: nucleotidyltransferase, transferase
- 3e8v.pdb.
structural genomics, unknown function 20-aug-08 3e8v
Ba
Title: crystal structure of a possible transglutaminase-family protein proteolytic fragment from bacteroides fragilis
Author: j. b. bonanno, m. rutter, k. t. bain, s. hu, r. romero, d. smith, s. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: unknown function, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3e9w.pdb.
dna 24-aug-08 3e9w
Title: x-ray crystal structure of the hexamer dcacacg:crystal grown in the presence of cobalt(iii)hexammine chloride.
Author: s. venkadesh, p. k. mandal, n. gautham
Keywords: dna
- 3ea1.pdb.
lyase 24-aug-08 3ea1
Zn
Title: crystal structure of the y247s/y251s mutant of phosphatidylinositol-specific phospholipase c from bacillus thuringiensis
Author: x. shi, c. shao, x. zhang, c. zambonelli, a. g. redfied, j. f. head, b. a. seaton, m. f. roberts
Keywords: pi-plc, dimer, interfacially impaired, membrane binding, tim barrel, lipid degradation, lyase, secreted
- 3ea2.pdb.
lyase 24-aug-08 3ea2
Zn
Title: crystal structure of the myo-inositol bound y247s/y251s mutant of phosphatidylinositol-specific phospholipase c from bacillus thuringiensis
Author: x. shi, c. shao, x. zhang, c. zambonelli, a. g. redfied, j. f. head, b. a. seaton, m. f. roberts
Keywords: myo-inositol, pi-plc, dimer, interfacially impaired, membrane binding, tim barrel, lipid degradation, lyase, secreted
- 3ea3.pdb.
lyase 24-aug-08 3ea3
Mn
Title: crystal structure of the y246s/y247s/y248s/y251s mutant of phosphatidylinositol-specific phospholipase c from bacillus thuringiensis
Author: x. shi, c. shao, x. zhang, c. zambonelli, a. g. redfied, j. f. head, b. a. seaton, m. f. roberts
Keywords: pi-plc, dimer, interfacially impaired, membrane binding, tim barrel, lipid degradation, lyase, secreted
- 3eab.pdb.
cell cycle 25-aug-08 3eab
Title: crystal structure of spastin mit in complex with escrt iii
Author: d. yang, n. rimanchi, b. renvoise, j. lippincott-schwartz, c. blackstone, j. h. hurley
Keywords: chmp, mit, escrt, alternative splicing, atp- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding, nucleus, polymorphism, cell cycle
- 3eag.pdb.
ligase 25-aug-08 3eag
Se
Title: the crystal structure of udp-n-acetylmuramate:l-alanyl- gamma-d-glutamyl-meso-diaminopimelate ligase (mpl) from neisseria meningitides
Author: c. chang, r. hendricks, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: nucleotide-binding
- 3eah.pdb.
oxidoreductase 25-aug-08 3eah
Cl Zn Fe
Title: structure of inhibited human enos oxygenase domain
Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
- 3eai.pdb.
oxidoreductase 25-aug-08 3eai
Fe
Title: structure of inhibited murine inos oxygenase domain
Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
- 3eam.pdb.
membrane protein, transport protein 26-aug-08 3eam
Title: an open-pore structure of a bacterial pentameric ligand- gated ion channel
Author: n. bocquet, h. nury, m. baaden, c. le poupon, j. p. changeux, m. delarue, p. j. corringer
Keywords: membrane protein, transport protein
- 3ebd.pdb.
oxidoreductase 27-aug-08 3ebd
Fe
Title: structure of inhibited murine inos oxygenase domain
Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
- 3ebf.pdb.
oxidoreductase 27-aug-08 3ebf
Fe
Title: structure of inhibited murine inos oxygenase domain
Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
- 3ebs.pdb.
oxidoreductase 28-aug-08 3ebs
Fe
Title: human cytochrome p450 2a6 i208s/i300f/g301a/s369g in complex with phenacetin
Author: n. m. devore, e. e. scott
Keywords: p450 2a6, cyp2a13, p450 2a13, monooxygenase, oxidoreducatase, heme, endoplasmic reticulum, iron, membrane, metal-binding, microsome, phenacetin, oxidoreductase, polymorphism
- 3ec1.pdb.
hydrolase, signaling protein 28-aug-08 3ec1
Title: structure of yqeh gtpase from geobacillus stearothermophilus (an atnos1 / atnoa1 ortholog)
Author: j. sudhamsu, b. r. crane
Keywords: atnos1, atnoa1, gtpase, trap, pvhl, hydrolase, signaling protein
- 3ecq.pdb.
hydrolase 01-sep-08 3ecq
Na Ca Se
Title: endo-alpha-n-acetylgalactosaminidase from streptococcus pneumoniae: semet structure
Author: m. e. c. caines, h. zhu, m. vuckovic, n. c. j. strynadka
Keywords: cell wall, peptidoglycan-anchor, secreted
- 3edc.pdb.
transcription 03-sep-08 3edc
Title: crystal structure of a 1.6-hexanediol bound tetrameric form of escherichia coli lac-repressor refined to 2.1 resolution
Author: k. a. e. stenberg
Keywords: allosteric, tetramer, dna-binding, repressor, transcription, transcription regulation
- 3edu.pdb.
structural protein 03-sep-08 3edu
Title: crystal structure of the ankyrin-binding domain of human erythroid spectrin
Author: m. simonovic, p. stabach, i. simonovic, t. a. steitz, j. s. morrow
Keywords: structural protein
- 3ef7.pdb.
cell adhesion 08-sep-08 3ef7
Zn Ca
Title: zp-n domain of mammalian sperm receptor zp3 (crystal form iii)
Author: m. monne', l. jovine
Keywords: immunoglobulin-like fold, glycoprotein, receptor, secreted, transmembrane, cell adhesion
- 3efr.pdb.
ligase 10-sep-08 3efr
Title: biotin protein ligase r40g mutant from aquifex aeolicus in complex with biotin
Author: c. m. tron, i. w. mcnae, m. d. walkinshaw, r. l. baxter, d. j. campopiano
Keywords: ligase
- 3efs.pdb.
ligase 10-sep-08 3efs
Title: biotin protein ligase from aquifex aeolicus in complex with biotin and atp
Author: c. m. tron, i. w. mcnae, m. d. walkinshaw, r. l. baxter, d. j. campopiano
Keywords: ligase
- 3efy.pdb.
cell cycle 10-sep-08 3efy
Title: structure of the cyclomodulin cif from pathogenic escherichia coli
Author: c. e. stebbins, y. hsu
Keywords: cell cycle, bacteria, virulence factor, type iii secretion, e. coli, plasmid
- 3egn.pdb.
splicing 11-sep-08 3egn
Title: c-terminal rna recognition motif of the u11/u12 65k protein
Author: c. netter, m. c. wahl
Keywords: phosphoprotein, rna-binding, spliceosome
- 3ehs.pdb.
membrane protein 14-sep-08 3ehs
Title: crystal structure of the extracellular domain of human corticotropin releasing factor receptor type 1 (crfr1)
Author: a. a. pioszak, h. e. xu
Keywords: transducer, transmembrane, membrane protein
- 3eht.pdb.
membrane protein 14-sep-08 3eht
Title: crystal structure of the extracellular domain of human corticotropin releasing factor receptor type 1 (crfr1) in complex with crf
Author: a. a. pioszak, h. e. xu
Keywords: transducer, transmembrane, amidation, cleavage on pair of basic residues, hormone, secreted, membrane protein
- 3ehu.pdb.
membrane protein 14-sep-08 3ehu
Ca
Title: crystal structure of the extracellular domain of human corticotropin releasing factor receptor type 1 (crfr1) in complex with crf
Author: a. a. pioszak, h. e. xu
Keywords: receptor, transducer, transmembrane, amidation, cleavage on pair of basic residues, hormone, secreted, membrane protein
- 3ehz.pdb.
membrane protein 15-sep-08 3ehz
Title: x-ray structure of the pentameric ligand gated ion channel of gloebacter violaceus (glic) in a presumptive open conformation
Author: r. j. c. hilf, r. dutzler
Keywords: membrane protein, prokaryotic cys-loop receptor, cation selective channel
- 3ei0.pdb.
membrane protein 15-sep-08 3ei0
Title: structure of the e221a mutant of the gloebacter violaceus pentameric ligand gated ion channnel (glic)
Author: r. j. c. hilf, r. dutzler
Keywords: membrane protein, prokaryotic cys-loop receptor, cation selective channel
- 3ei5.pdb.
transferase 15-sep-08 3ei5
Title: crystal structure of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with plp-glu: an external aldimine mimic
Author: n. watanabe, m. d. clay, m. j. van belkum, m. m. cherney, j. c. vederas, m. n. g. james
Keywords: lysine biosynthesis, pyridoxal 5' phosphate, external aldimine, ll-diaminopimelate, chloroplast, plastid, pyridoxal phosphate, transferase, transit peptide
- 3ei6.pdb.
transferase 15-sep-08 3ei6
Title: crystal structure of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with plp-dap: an external aldimine mimic
Author: n watanabe, m. d. clay, m. j. van belkum, m. m. cherney, j. c. vederas, m. n. g. james
Keywords: lysine biosynthesis, pyridoxal 5' phosphate, external aldimine, ll-diaminopimelate, chloroplast, plastid, pyridoxal phosphate, transferase, transit peptide
- 3ei7.pdb.
transferase 15-sep-08 3ei7
Title: crystal structure of apo-ll-diaminopimelate aminotransferase from arabidopsis thaliana (no plp)
Author: n. watanabe, m. d. clay, m. j. van belkum, m. m. cherney, j. c. vederas, m. n. g. james
Keywords: lysine biosynthesis, pyridoxal 5' phosphate, arabidopsis thaliana, ll-diaminopimelate, chloroplast, plastid, pyridoxal phosphate, transferase, transit peptide
- 3ei8.pdb.
transferase 15-sep-08 3ei8
Title: crystal structure of k270n variant of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with ll-dap: external aldimine form
Author: n. watanabe, m. d. clay, m. j. van belkum, m. m. cherney, j. c. vederas, m. n. g. james
Keywords: lysine biosynthesis, pyridoxal 5' phosphate, external aldimine, ll-diaminopimelate, chloroplast, plastid, pyridoxal phosphate, transferase, transit peptide
- 3ei9.pdb.
transferase 15-sep-08 3ei9
Title: crystal structure of k270n variant of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with l-glu: external aldimine form
Author: n. watanabe, m. d. clay, m. j. van belkum, m. m. cherney, j. c. vederas, m. n. g. james
Keywords: lysine biosynthesis, pyridoxal 5' phosphate, external aldimine, ll-diaminopimelate, chloroplast, plastid, pyridoxal phosphate, transferase, transit peptide
- 3eia.pdb.
transferase 15-sep-08 3eia
Title: crystal structure of k270q variant of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with l-glu: external aldimine form
Author: n. watanabe, m. d. clay, m. j. van belkum, m. m. cherney, j. c. vederas, m. n. g. james
Keywords: lysine biosynthesis, pyridoxal 5' phosphate, external aldimine, ll-diaminopimelate, chloroplast, plastid, pyridoxal phosphate, transferase, transit peptide
- 3eib.pdb.
transferase 15-sep-08 3eib
Title: crystal structure of k270n variant of ll-diaminopimelate aminotransferase from arabidopsis thaliana
Author: n. watanabe, m. d. clay, m. j. van belkum, m. m. cherney, j. c. vederas, m. n. g. james
Keywords: lysine biosynthesis, pyridoxal 5' phosphate, arabidopsis thaliana, ll-diaminopimelate, chloroplast, plastid, pyridoxal phosphate, transferase, transit peptide
- 3eie.pdb.
protein transport 15-sep-08 3eie
Title: crystal structure of s.cerevisiae vps4 in the so4-bound state
Author: m. d. gonciarz, f. g. whitby, d. m. eckert, c. kieffer, a. heroux, w. i. sundquist, c. p. hill
Keywords: atp-binding, endosome, membrane, nucleotide-binding, phosphoprotein, protein transport, transport
- 3eih.pdb.
protein transport 15-sep-08 3eih
Mg
Title: crystal structure of s.cerevisiae vps4 in the presence of atpgammas
Author: m. d. gonciarz, f. g. whitby, d. m. eckert, c. kieffer, a. heroux, w. i. sundquist, c. p. hill
Keywords: atp-binding, endosome, membrane, nucleotide-binding, phosphoprotein, protein transport, transport,
- 3eiu.pdb.
hydrolase 17-sep-08 3eiu
F
Title: a second transient position of atp on its trail to the nucleotide-binding site of subunit b of the motor protein a1ao atp synthase
Author: s. m. s. manimekalai, a. kumar, a. m. balakrishna, g. gruber
Keywords: atp synthesis, hydrogen ion transport, ion transport, transport
- 3ej8.pdb.
oxidoreductase 17-sep-08 3ej8
Zn Fe
Title: structure of double mutant of human inos oxygenase domain with bound immidazole
Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
- 3el6.pdb.
lyase 20-sep-08 3el6
Cl
Title: crystal structure of the erythromycin dehydratase
Author: a. t. keatinge-clay
Keywords: acyltransferase, antibiotic biosynthesis, multifunctional enzyme, nadp, phosphopantetheine, transferase, lyase
- 3emh.pdb.
gene regulation 24-sep-08 3emh
Title: structural basis of wdr5-mll interaction
Author: j. j. song, r. e. kingston
Keywords: histone, wd40 repeat, x-ray crystallography, nucleus, phosphoprotein, wd repeat, zinc-finger, gene regulation
- 3eml.pdb.
membrane protein, receptor 24-sep-08 3eml
Title: the 2.6 a crystal structure of a human a2a adenosine receptor bound to zm241385.
Author: v. -p. jaakola, m. t. griffith, m. a. hanson, v. cherezov, e. y. t. chien, j. r. lane, a. p. ijzerman, r. c. stevens
Keywords: caffeine, gpcr, membrane protein, receptor, lcp, mesophase
- 3epc.pdb.
viral protein 29-sep-08 3epc
(electron microscopy)
Title: cryoem structure of poliovirus receptor bound to poliovirus type 1
Author: p. zhang, s. mueller, m. c. morais, c. m. bator, v. d. bowman, s. hafenstein, e. wimmer, m. g. rossmann
Keywords: viral protein
- 3epd.pdb.
viral protein 29-sep-08 3epd
(electron microscopy)
Title: cryoem structure of poliovirus receptor bound to poliovirus type 3
Author: p. zhang, s. mueller, m. c. morais, c. m. bator, v. d. bowman, s. hafenstein, e. wimmer, m. g. rossmann
Keywords: viral protein
- 3epf.pdb.
viral protein 29-sep-08 3epf
Cl
(electron microscopy)
Title: cryoem structure of poliovirus receptor bound to poliovirus type 2
Author: p. zhang, s. mueller, m. c. morais, c. m. bator, v. d. bowman, s. hafenstein, e. wimmer, m. g. rossmann
Keywords: viral protein
- 3eq1.pdb.
transferase 30-sep-08 3eq1
Title: the crystal structure of human porphobilinogen deaminase at 2.8a resolution
Author: s. e. kolstoe, r. gill, f. mohammed, s. p. wood
Keywords: alternative splicing, cytoplasm, disease mutation, heme biosynthesis, porphyrin biosynthesis, transferase
- 3eqs.pdb.
ligase 01-oct-08 3eqs
Title: crystal structure of human mdm2 in complex with a 12-mer peptide inhibitor
Author: m. pazgier, w. lu
Keywords: ubl conjugation pathway, zinc, zinc-finger
- 3eqt.pdb.
rna binding protein/rna 01-oct-08 3eqt
Zn
Title: crystal structure of human lgp2 c-terminal domain in complex with dsrna
Author: p. li, x. li
Keywords: rna binding protein/rna complex
- 3equ.pdb.
biosynthetic protein 01-oct-08 3equ
Se
Title: crystal structure of penicillin-binding protein 2 from neisseria gonorrhoeae
Author: a. j. powell, a. m. deacon, r. a. nicholas, c. davies
Keywords: class b transpeptidase, cell division, cell inner membrane, cell membrane, cell shape, cell wall biogenesis/degradation, peptidoglycan synthesis, biosynthetic protein
- 3eqv.pdb.
biosynthetic protein 01-oct-08 3eqv
Title: crystal structure of penicillin-binding protein 2 from neisseria gonorrhoeae containing four mutations associated with penicillin resistance
Author: a. j. powell, a. m. deacon, r. a. nicholas, c. davies
Keywords: class b transpeptidase, penicillin resistance, cell division, cell inner membrane, cell membrane, cell shape, cell wall biogenesis/degradation, peptidoglycan synthesis, biosynthetic protein
- 3eqy.pdb.
oncoprotein 01-oct-08 3eqy
Title: crystal structure of human mdmx in complex with a 12-mer peptide inhibitor
Author: m. pazgier, w. lu
Keywords: mdmx,mdmx-peptide inhibitor complex, oncoprotein, metal-binding, nucleus, polymorphism, zinc, zinc-finger
- 3erh.pdb.
oxidoreductase 02-oct-08 3erh
I Fe Ca
Title: first structural evidence of substrate specificity in mammalian peroxidases: crystal structures of substrate complexes with lactoperoxidases from two different species
Author: i. a. sheikh, n. singh, a. k. singh, m. sinha, s. b. singh, a. bhushan, p. kaur, a. srinivasan, s. sharma, t. p. singh
Keywords: complex, heme, oxidoreductase
- 3eri.pdb.
oxidoreductase 02-oct-08 3eri
I Fe Ca
Title: first structural evidence of substrate specificity in mammalian peroxidases: crystal structures of substrate complexes with lactoperoxidases from two different species
Author: a. k. singh, n. singh, i. a. sheikh, m. sinha, a. bhushan, p. kaur, a. srinivasan, s. sharma, t. p. singh
Keywords: complex, heme, oxidoreductase, antibiotic, antimicrobial, calcium, cleavage on pair of basic residues, glycoprotein, hydrogen peroxide, iron, metal-binding, peroxidase, secreted
- 3err.pdb.
ligase 03-oct-08 3err
Title: microtubule binding domain from mouse cytoplasmic dynein as a fusion with seryl-trna synthetase
Author: a. p. carter
Keywords: microtubule binding domain, coiled coil, fusion protein, ligase
- 3esw.pdb.
hydrolase 06-oct-08 3esw
Zn
Title: complex of yeast pngase with glcnac2-iac.
Author: g. zhao, x. zhou, w. j. lennarz, h. schindelin
Keywords: cytoplasm, hydrolase, metal-binding, nucleus, zinc, dna damage, dna repair, phosphoprotein, ubl conjugation pathway
- 3etd.pdb.
oxidoreductase 07-oct-08 3etd
Cl
Title: structure of glutamate dehydrogenase complexed with bithionol
Author: m. li, t. j. smith
Keywords: inhibitors, bithionol, oxidoreductase
- 3ete.pdb.
oxidoreductase 07-oct-08 3ete
Cl
Title: crystal structure of bovine glutamate dehydrogenase complexed with hexachlorophene
Author: m. li, t. j. smith
Keywords: hexachlorophene, inhibitor, oxidoreductase
- 3etf.pdb.
oxidoreductase 07-oct-08 3etf
Se
Title: crystal structure of a putative succinate-semialdehyde dehydrogenase from salmonella typhimurium lt2
Author: j. s. brunzelle, e. evdokimova, m kudritska, z wawrzak, w. f. anderson, a. savchenk, center for structural genomics of infectious diseases (csgid)
Keywords: center for structural genomics of infectious diseases, oxidoreductase, csgid
- 3etg.pdb.
oxidoreductase 07-oct-08 3etg
I Br
Title: glutamate dehydrogenase complexed with gw5074
Author: m. li, t. j. smith
Keywords: gw5074, inhibition, oxidoreductase
- 3eth.pdb.
lyase 08-oct-08 3eth
Mg
Title: crystal structure of e. coli purk in complex with mgatp
Author: h. m. holden, j. b. thoden
Keywords: purine biosynthesis, antimicrobial, atp-binding, decarboxylase, lyase, nucleotide-binding
- 3etj.pdb.
lyase 08-oct-08 3etj
Cl Mg
Title: crystal structure e. coli purk in complex with mg, adp, and pi
Author: h. m. holden, j. b. thoden
Keywords: purine biosynthesis, antimicrobial, atp-binding, decarboxylase, lyase, nucleotide-binding
- 3etp.pdb.
transferase 08-oct-08 3etp
Title: the crystal structure of the ligand-binding domain of the ephb2 receptor at 2.0 a resolution
Author: y. goldgur, s. paavilainen, d. b nikolov, j. p. himanen
Keywords: tyrosine kinase, alternative splicing, atp- binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphoprotein, receptor, transferase, transmembrane, tyrosine-protein kinase
- 3eul.pdb.
transcription 10-oct-08 3eul
Cl
Title: structure of the signal receiver domain of the putative response regulator narl from mycobacterium tuberculosis
Author: g. schneider, r schnell, d agren
Keywords: dna-binding, transcription, transcription regulation
- 3evs.pdb.
cytokine/transferase receptor 13-oct-08 3evs
Title: crystal structure of the gdf-5:bmp receptor ib complex.
Author: a. kotzsch, t. d. mueller
Keywords: kinase, magnesium, manganese, membrane, metal-binding, nucleotide- binding, receptor, serine/threonine-protein kinase, transferase, transmembrane, cytokine/transferase receptor complex
- 3ewe.pdb.
protein transport,structural protein 14-oct-08 3ewe
Title: crystal structure of the nup85/seh1 complex
Author: s. g. brohawn, n. c. leksa, k. r. rajashankar, t. u. schwartz
Keywords: nuclear pore complex, mrna transport, nucleus, protein transport, translocation, cell membrane, membrane, phosphoprotein, transport, wd repeat, membrane protein, protein transport,structural protein
- 3ewj.pdb.
hydrolase 15-oct-08 3ewj
Zn
Title: crystal structure of catalytic domain of tace with carboxylate inhibitor
Author: p. orth
Keywords: transmembrane, zinc, zymogen
- 3ewl.pdb.
structural genomics, unknown function 15-oct-08 3ewl
Se
Title: crystal structure of conserved protein bf1870 of unknown function from bacteroides fragilis
Author: y. kim, c. tesar, g. cobb, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3exc.pdb.
hydrolase 16-oct-08 3exc
Cl Na Se
Title: structure of the rna'se sso8090 from sulfolobus solfataricus
Author: a. u. singer, t. skarina, k. tan, o. kagan, o. onopriyenko, a. m. edwards, a. joachimiak, a. f. yakunin, a. savchenko, midwest center for structural genomics (mcsg)
Keywords: dimer, catalytic aspartate, rna'ase, hydrolase, protein structure initiative, midwest center for structural genomics, mcsg, psi-2
- 3exe.pdb.
oxidoreductase 16-oct-08 3exe
Mn K
Title: crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex
Author: m. kato, r. m. wynn, j. l. chuang, s. -c. tso, m. machius, j. li, d. t. chuang
- 3exf.pdb.
oxidoreductase 16-oct-08 3exf
Mg K
Title: crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex
Author: m. kato, r. m. wynn, j. l. chuang, s. -c. tso, m. machius, j. li, d. t. chuang
- 3exg.pdb.
oxidoreductase 16-oct-08 3exg
K
Title: crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex
Author: m. kato, r. m. wynn, j. l. chuang, s. -c. tso, m. machius, j. li, d. t. chuang
- 3exh.pdb.
oxidoreductase 16-oct-08 3exh
Mn K
Title: crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex
Author: m. kato, r. m. wynn, j. l. chuang, s. -c. tso, m. machius, j. li, d. t. chuang
- 3ey9.pdb.
oxidoreductase 20-oct-08 3ey9
Mg
Title: structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli
Author: p. neumann, a. weidner, a. pech, m. t. stubbs, k. tittmann
Keywords: membrane-associated flavoprotein dehydrogenase, interactions with lipids, cell membrane, fad, flavoprotein, lipid-binding, magnesium, membrane, oxidoreductase, thiamine pyrophosphate
- 3eya.pdb.
oxidoreductase 20-oct-08 3eya
Mg
Title: structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli
Author: p. neumann, a. weidner, a. pech, m. t. stubbs, k. tittmann
Keywords: membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane, fad, flavoprotein, lipid-binding, magnesium, membrane, oxidoreductase, thiamine pyrophosphate
- 3eyl.pdb.
ligase 21-oct-08 3eyl
Zn
Title: crystal structure of xiap bir3 domain in complex with a smac-mimetic compound
Author: f. cossu, m. milani, e. mastrangelo, m. bolognesi
Keywords: smac-mimetics,zinc-finger, cytoplasm, ligase, metal-binding, phosphoprotein, polymorphism, protease inhibitor, thiol protease inhibitor, ubl conjugation, ubl conjugation pathway, zinc
- 3eyy.pdb.
transport 22-oct-08 3eyy
Cl Zn Ni
Title: structural basis for the specialization of nur, a nickel- specific fur homologue, in metal sensing and dna recognition
Author: s. -s. cha, y. j. an
Keywords: nickel-uptake regulator, d-domain, dimerization domain, db-domain, dna-binding domain, transport
- 3f1q.pdb.
oxidoreductase 28-oct-08 3f1q
Title: human dihydroorotate dehydrogenase in complex with a leflunomide derivative inhibitor 1
Author: t. heikkila, m. davies, g. a. mcconkey, c. w. g. fishwick, m. r. parsons, a. p. johnson
Keywords: leflunomide, fad, flavoprotein, membrane, mitochondrion, mitochondrion inner membrane, oxidoreductase, polymorphism, pyrimidine biosynthesis, transit peptide
- 3f1x.pdb.
transferase 28-oct-08 3f1x
Se
Title: three dimensional structure of the serine acetyltransferase from bacteroides vulgatus.
Author: a. p. kuzin, y. chen, j. seetharaman, s. sahdev, d. wang, l. mao, k. cunningham, m. maglaqui, r. xiao, j. liu, j. k. everett, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, transferase
- 3f41.pdb.
hydrolase 31-oct-08 3f41
Title: structure of the tandemly repeated protein tyrosine phosphatase like phytase from mitsuokella multacida
Author: r. j. gruninger, l. b. selinger, s. c. mosimann
Keywords: tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase
- 3f4r.pdb.
oxidoreductase 02-nov-08 3f4r
Title: crystal structure of wolbachia pipientis alpha-dsba1
Author: m. kurz, b. heras, j. l. martin
Keywords: dsba, oxidoreductase
- 3f4s.pdb.
oxidoreductase 02-nov-08 3f4s
Title: crystal structure of wolbachia pipientis alpha-dsba1 t172v
Author: m. kurz, b. heras, j. l. martin
Keywords: dsba, oxidoreductase
- 3f4t.pdb.
oxidoreductase 02-nov-08 3f4t
Title: crystal structure of wolbachia pipientis alpha-dsba1 c97a/c146a
Author: m. kurz, b. heras, j. l. martin
Keywords: dsba, oxidoreductase
- 3f57.pdb.
structural protein 03-nov-08 3f57
Title: crystal structure of human erythroid beta spectrin repeats 14 and 15 (ankyrin binding domain)
Author: j. j. ipsaro, a. mondragon
Keywords: phosphoprotein, structural protein
- 3f59.pdb.
structural protein 03-nov-08 3f59
Br
Title: crystal structure of zu5-ank, the spectrin binding region of human erythroid ankyrin
Author: j. j. ipsaro, l. huang, a. mondragon
Keywords: membrane, phosphoprotein, polymorphism, sarcoplasmic reticulum, structural protein
- 3f6r.pdb.
electron transport 06-nov-08 3f6r
Title: desulfovibrio desulfuricans (atcc 29577) oxidized flavodoxin
Author: m. guelker, y. shamoo
Keywords: fmn binding, oxidized, electron transport, flavoprotein, fmn, transport
- 3f6s.pdb.
electron transport 06-nov-08 3f6s
Title: desulfovibrio desulfuricans (atcc 29577) oxidized flavodoxin alternate conformers
Author: m. guelker, y. shamoo
Keywords: fmn binding, oxidized, electron transport, flavoprotein, fmn, transport
- 3f75.pdb.
hydrolase 07-nov-08 3f75
Cl Br
Title: activated toxoplasma gondii cathepsin l (tgcpl) in complex with its propeptide
Author: e. t. larson, e. a. merritt, medical structural genomics of pathogenic protozoa (msgpp)
Keywords: msgpp, cysteine protease, parasite, protozoa, hydrolase, thiol protease
- 3f7c.pdb.
structural genomics, unknown function 07-nov-08 3f7c
Na Se
Title: crystal structure of protein of unknown function (duf416) (yp_958225.1) from marinobacter aquaeolei vt8 at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: protein of unknown function (duf416), structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
- 3f8d.pdb.
oxidoreductase 12-nov-08 3f8d
Title: structure of sulfolobus solfataricus thioredoxin reductase mutant c147a
Author: a. ruggiero, m. masullo, m. r. ruocco, p. arcari, a. zagari, l. vitagliano
Keywords: nucleotide binding, fad, flavoprotein, oxidoreductase
- 3f8k.pdb.
transferase 12-nov-08 3f8k
Se
Title: crystal structure of protein acetyltransferase (pat) from sulfolobus solfataricus
Author: m. m. brent
- 3f8p.pdb.
oxidoreductase 13-nov-08 3f8p
Title: structure of sulfolobus solfataricus trxr-b3
Author: a. ruggiero, m. masullo, m. r. ruocco, p. arcari, a. zagari, l. vitagliano
Keywords: nucleotide binding, fad, flavoprotein, oxidoreductase
- 3f8r.pdb.
oxidoreductase 13-nov-08 3f8r
Title: crystal structure of sulfolobus solfataricus thioredoxin reductase b3 in complex with two nadp molecules
Author: a. ruggiero, m. masullo, m. r. ruocco, p. arcari, a. zagari, l. vitagliano
Keywords: nucleotide binding, fad, flavoprotein, oxidoreductase
- 3f9w.pdb.
transferase 14-nov-08 3f9w
Title: structural insights into lysine multiple methylation by set domain methyltransferases, set8-y334f / h4-lys20 / adohcy
Author: j-f. couture, l. m. a. dirk, j. s. brunzelle, r. l. houtz, r. c. trievel
Keywords: transcription regulation, acetylation, dna-binding, methylation, nucleosome core
- 3f9x.pdb.
transferase 14-nov-08 3f9x
Title: structural insights into lysine multiple methylation by set domain methyltransferases, set8-y334f / h4-lys20me2 / adohcy
Author: j-f. couture, l. m. a. dirk, j. s. brunzelle, r. l. houtz, r. c. trievel
Keywords: transcription regulation, acetylation, dna-binding, methylation, nucleosome core
- 3f9y.pdb.
transferase 14-nov-08 3f9y
Title: structural insights into lysine multiple methylation by set domain methyltransferases, set8-y334f / h4-lys20me1 / adohcy
Author: j-f. couture, l. m. a. dirk, j. s. brunzelle, r. l. houtz, r. c. trievel
Keywords: transcription regulation, acetylation, dna-binding, methylation, nucleosome core
- 3f9z.pdb.
transferase 14-nov-08 3f9z
Title: structural insights into lysine multiple methylation by set domain methyltransferases, set8-y245f / h4-lys20 / adohcy
Author: j-f. couture, l. m. a. dirk, j. s. brunzelle, r. l. houtz, r. c. trievel
Keywords: transcription regulation, acetylation, dna-binding, methylation, nucleosome core
- 3faq.pdb.
oxidoreductase 18-nov-08 3faq
I Fe Ca
Title: crystal struture of lactoperoxidase complex with cyanide
Author: i. a. sheikh, n. singh, s. sharma, p. kaur, a. srinivasan, t. p. singh
Keywords: heme, peroxidase, inhibitor, oxidoreductase
- 3fb3.pdb.
transferase 18-nov-08 3fb3
Title: crystal structure of trypanosoma brucei acetyltransferase, tb11.01.2886
Author: a. k. wernimont, k. marino, a. z. zhang, d. ma, y. h. lin, f. mackenzie, i. kozieradzki, d. cossar, y. zhao, m. schapira, a. bochkarev, c. h. arrowsmith, c. bountra, j. weigelt, a. m. edwards, m. a. j ferguson, r. hui, w. qiu, structural genomics consortium (sgc)
Keywords: malaria, structural genomics, structural genomics consortium, sgc, transferase
- 3fdl.pdb.
apoptosis 26-nov-08 3fdl
Title: bim bh3 peptide in complex with bcl-xl
Author: w. d. fairlie, e. f. lee, b. j. smith, p. e. czabotar, p. m. colman
Keywords: peptide-protein complex, apoptosis, alternative splicing, membrane, mitochondrion, nucleus, transmembrane, phosphoprotein
- 3fdm.pdb.
apoptosis 26-nov-08 3fdm
Title: alpha/beta foldamer in complex with bcl-xl
Author: w. d. fairlie, e. f. lee, b. j. smith, p. e. czabotar, p. m. colman, j. d. sadowsky, k. j. peterson-kaufman, s. h. gellman
Keywords: helical bundle, foldamer, apoptosis, alternative splicing, membrane, mitochondrion, nucleus, transmembrane
- 3fe5.pdb.
oxidoreductase 27-nov-08 3fe5
Fe
Title: crystal structure of 3-hydroxyanthranilate 3,4-dioxygenase from bovine kidney
Author: i. dilovic, f. gliubich, g. malpeli, g. zanotti, d. matkovic- calogovic
Keywords: 3hao, quinolinic acid, cytoplasm, dioxygenase, iron, metal-binding, oxidoreductase
- 3ffc.pdb.
immune system 03-dec-08 3ffc
Cl Na Cd
Title: crystal structure of cf34 tcr in complex with hla-b8/flr
Author: s. gras, s. r. burrows, l. kjer-nielsen, c. s. clements, y. c. liu, l. c. sullivan, a. g. brooks, a. w. purcell, j. mccluskey, j. rossjohn
Keywords: secreted, immune system
- 3fj6.pdb.
oxidoreductase 14-dec-08 3fj6
Cl
Title: human dihydroorotate dehydrogenase in complex with a leflunomide derivative inhibitor 2
Author: t. heikkila
Keywords: fad, flavoprotein, membrane, mitochondrion, mitochondrion inner membrane, oxidoreductase, polymorphism, pyrimidine biosynthesis, transit peptide
- 3fjl.pdb.
oxidoreductase 14-dec-08 3fjl
Title: human dihydroorotate dehydrogenase in complex with a leflunomide derivative inhibitor 3
Author: t. heikkila
Keywords: tim barrel, fad, flavoprotein, membrane, mitochondrion, mitochondrion inner membrane, oxidoreductase, polymorphism, pyrimidine biosynthesis, transit peptide
- 3fjp.pdb.
ligase 15-dec-08 3fjp
Title: apo structure of biotin protein ligase from aquifex aeolicus
Author: i. w. mcnae, c. m. tron, r. l. baxter, m. d. walkinshaw, d. j. campopiano
Keywords: biotin protein ligase, ligase
- 3flo.pdb.
transferase 19-dec-08 3flo
Zn
Title: crystal structure of the carboxyl-terminal domain of yeast dna polymerase alpha in complex with its b subunit
Author: s. n. klinge, l. pellegrini
Keywords: phosphoesterase fold, ob fold, zinc-binding motif, dna replication, nucleus, phosphoprotein, dna-binding, dna-directed dna polymerase, nucleotidyltransferase, transferase
- 3fm9.pdb.
isomerase 19-dec-08 3fm9
Mg
Title: analysis of the structural determinants underlying discrimination between substrate and solvent in beta- phosphoglucomutase catalysis
Author: l. finci, s. lahiri, e. peisach, k. n. allen
Keywords: phosphoaspartate, induced fit, domain movement, isomerase
- 3foe.pdb.
isomerase/dna 30-dec-08 3foe
Cl F
Title: structural insight into the quinolone-dna cleavage complex of type iia topoisomerases
Author: i. laponogov, m. k. sohi, d. a. veselkov, x. -s. pan, r. sawhney, a. w. thompson, k. e. mcauley, l. m. fisher, m. r. sanderson
Keywords: topoisomerase, dna, protein-dna cleavage complex, streptococcus pneumoniae, clinafloxacin, cell membrane, dna-binding, isomerase, membrane, atp-binding, nucleotide- binding, isomerase/dna complex
- 3fof.pdb.
isomerase/dna 30-dec-08 3fof
F
Title: structural insight into the quinolone-dna cleavage complex of type iia topoisomerases
Author: i. laponogov, m. k. sohi, d. a. veselkov, x. -s. pan, r. sawhney, a. w. thompson, k. e. mcauley, l. m. fisher, m. r. sanderson
Keywords: topoisomerase, dna, protein-dna cleavage complex, streptococcus pneumoniae, moxifloxacin, cell membrane, dna- binding, isomerase, membrane, atp-binding, nucleotide- binding, isomerase/dna complex
- 3foq.pdb.
transferase 31-dec-08 3foq
Title: crystal structure of n-acetylglucosamine-1-phosphate uridyltransferase (glmu) from mycobacterium tuberculosis in a cubic space group.
Author: s. k. verma, b. prakash
Keywords: multifunctional enzyme, nucleotidyltransferase, peptidoglycan synthesis, transferase
- 3ft5.pdb.
chaperone 12-jan-09 3ft5
Title: structure of hsp90 bound with a novel fragment
Author: j. b. barker, o. mather, r. k. y. cheng, s. palan, b. felicetti
Keywords: alternative splicing, atp-binding, chaperone, cytoplasm, nucleotide- binding, phosphoprotein, stress response
- 3fur.pdb.
transcription/transcription regulator 14-jan-09 3fur
Cl
Title: crystal structure of pparg in complex with int131
Author: z. wang, j. liu, n. walker
Keywords: receptor, transcription, transcription regulation, zinc, zinc-finger, int131, transcription/transcription regulator complex
- 3g02.pdb.
hydrolase 27-jan-09 3g02
Title: structure of enantioselective mutant of epoxide hydrolase from aspergillus niger generated by directed evolution
Author: a. naworyta, s. l. mowbray
Keywords: alpha/beta hydrolase fold, enantioselective, mutant, directed evolution, hydrolase
- 3g0i.pdb.
hydrolase 28-jan-09 3g0i
Title: complex of aspergillus niger epoxide hydrolase with valpromide (2-propylpentanamide)
Author: j. zou, s. l. mowbray
Keywords: alpha/beta hydrolase fold, valpromide, 2- propylpentanamide, hydrolase
- 3g0u.pdb.
oxidoreductase 28-jan-09 3g0u
Cl
Title: human dihydroorotate dehydrogenase in complex with a leflunomide derivative inhibitor 4
Author: m. davis, t. heikkila, g. a. mcconkey, c. w. g. fishwick, m. r. parsons, a. p. johnson
Keywords: tim-barrel, fad, flavoprotein, membrane, mitochondrion, mitochondrion inner membrane, oxidoreductase, polymorphism, pyrimidine biosynthesis, transit peptide
- 3g0x.pdb.
oxidoreductase 29-jan-09 3g0x
Title: human dihydroorotate dehydrogenase in complex with a leflunomide derivative inhibitor 5
Author: m. davies, t. heikkila, g. a. mcconkey, c. w. g. fishwick, m. r. parsons, a. p. johnson
Keywords: tim barrel, fad, flavoprotein, membrane, mitochondrion, mitochondrion inner membrane, oxidoreductase, polymorphism, pyrimidine biosynthesis, transit peptide
- 3g1r.pdb.
oxidoreductase 30-jan-09 3g1r
Title: crystal structure of human liver 5beta-reductase (akr1d1) in complex with nadp and finasteride. resolution 1.70 a
Author: l. di costanzo, j. drury, t. penning, d. w. christianson
Keywords: bile acid catabolism, cytoplasm, disease mutation, intrahepatic cholestasis, lipid metabolism, nadp, oxidoreductase, steroid metabolism
- 3g7d.pdb.
biosynthetic protein 09-feb-09 3g7d
Se Cd
Title: native phpd with cadmium atoms
Author: s. k. nair
Keywords: cupin, biosynthetic protein
- 3gau.pdb.
immune system 18-feb-09 3gau
(solution scattering)
Title: solution structure of human complement factor h in 50 mm nacl buffer
Author: a. i. okemefuna, r. nan, j. gor, s. j. perkins
Keywords: secreted, sushi, immune system
- 3gav.pdb.
immune system 18-feb-09 3gav
(solution scattering)
Title: solution structure of human complement factor h in 137 mm nacl buffer
Author: a. i. okemefuna, r. nan, j. gor, s. j. perkins
Keywords: secreted, sushi, immune system
- 3gaw.pdb.
immune system 18-feb-09 3gaw
(solution scattering)
Title: solution structure of human complement factor h in 250 mm nacl buffer
Author: a. i. okemefuna, r. nan, j. gor, s. j. perkins
Keywords: secreted, sushi, immune system
- 3gbf.pdb.
biosynthetic protein 19-feb-09 3gbf
Se Cd
Title: phpd with cadmium complexed with hydroethylphosphonate (hep)
Author: h. zhang, s. k. nair
Keywords: iron dependent oxygenase, biosynthetic protein
- 3gcd.pdb.
toxin 21-feb-09 3gcd
Na
Title: structure of the v. cholerae rtx cysteine protease domain in complex with an aza-leucine peptide inhibitor
Author: p. j. lupardus, k. c. garcia, a. shen, m. bogyo
Keywords: repeats-in-toxin, martx, cysteine protease, inositol hexakisphosphate, aza-peptide, aza-leu
- 3gcm.pdb.
transferase / protein binding 22-feb-09 3gcm
Mg
Title: crystal structure of e. coli polynucleotide phosphorylase bound to rna and rnase e
Author: s. nurmohamed, b. l. luisi
Keywords: cytoplasm, nucleotidyltransferase, rna- binding, transferase, hydrolase, transferase / protein binding complex
- 3gcp.pdb.
transferase 22-feb-09 3gcp
F
Title: human p38 map kinase in complex with sb203580
Author: c. gruetter, j. r. simard, d. rauh
Keywords: type i, sb203580, alternative splicing, atp- binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
- 3gcq.pdb.
transferase 22-feb-09 3gcq
Title: human p38 map kinase in complex with rl45
Author: c. gruetter, j. r. simard, m. getlik, d. rauh
Keywords: type ii, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
- 3gcs.pdb.
transferase 22-feb-09 3gcs
Cl F
Title: human p38 map kinase in complex with sorafenib
Author: c. gruetter, j. r. simard, d. rauh
Keywords: type ii, bay439006, alternative splicing, atp- binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
- 3gcu.pdb.
transferase 22-feb-09 3gcu
Title: human p38 map kinase in complex with rl48
Author: c. gruetter, j. r. simard, m. getlik, d. rauh
Keywords: type ii, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
- 3gcv.pdb.
transferase 22-feb-09 3gcv
Title: human p38 map kinase in complex with rl62
Author: c. gruetter, j. r. simard, m. getlik, d. rauh
Keywords: type ii, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
- 3gf4.pdb.
isomerase 26-feb-09 3gf4
Title: structure of udp-galactopyranose mutase bound to udp-glucose
Author: t. d. gruber, m. j. borrok, l. l. kiessling, k. t. forest
Keywords: protein-ligand complex, carbohydrate biosynthesis, fad, flavoprotein, isomerase, lipopolysaccharide biosynthesis
- 3gin.pdb.
metal binding protein 05-mar-09 3gin
Ca
Title: crystal structure of e454k-cbd1
Author: v. chaptal, g. mercado-besserer, j. abramson
Keywords: transmembrane, transport, metal transport, metal binding protein
- 3gk1.pdb.
metal binding protein 09-mar-09 3gk1
Ca As
Title: x-ray structure of bovine sbi132,ca(2+)-s100b
Author: t. h. charpentier, d. j. weber, e. a. toth
Keywords: alpha helical, acetylation, calcium, cytoplasm, metal-binding, nucleus, zinc, metal binding protein
- 3gk2.pdb.
metal binding protein 09-mar-09 3gk2
Ca As
Title: x-ray structure of bovine sbi279,ca(2+)-s100b
Author: t. h. charpentier, d. j. weber, e. a. toth
Keywords: alpha helical, acetylation, calcium, cytoplasm, metal-binding, nucleus, zinc, metal binding protein
- 3gk4.pdb.
metal binding protein 09-mar-09 3gk4
Ca
Title: x-ray structure of bovine sbi523,ca(2+)-s100b
Author: t. h. charpentier, d. j. weber, e. a. toth
Keywords: alpha helical, acetylation, calcium, cytoplasm, metal-binding, nucleus, zinc, metal binding protein
- 3gll.pdb.
transferase 12-mar-09 3gll
Title: crystal structure of polynucleotide phosphorylase (pnpase) core
Author: s. nurmohamed, b. l. luisi
Keywords: pnpase, rnase ph-fold, cytoplasm, nucleotidyltransferase, rna-binding, transferase
- 3glx.pdb.
transcription 12-mar-09 3glx
Ni
Title: crystal structure analysis of the dtxr(e175k) complexed with ni(ii)
Author: j. a. d'aquino, a. denninger, a. moulin, k. e. d'aquino, d. ringe
Keywords: regulator, dtxr, helix-turn-helix, metal ion, activation, dna-binding, ferrous iron, cytoplasm, transcription, transcriptional regulation, transcriptional regulator, iron, transcription regulation
- 3gme.pdb.
transferase / protein binding 13-mar-09 3gme
Mn
Title: crystal structure of polynucleotide phosphorylase in complex with rnase e and manganese
Author: s. nurmohamed, b. l. luisi
Keywords: cytoplasm, nucleotidyltransferase, rna- binding, transferase, hydrolase, transferase / protein binding complex
- 3gnu.pdb.
toxin 18-mar-09 3gnu
Cl
Title: toxin fold as basis for microbial attack and plant defense
Author: c. ottmann, b. luberacki, i. kuefner, w. koch, f. brunner, m. weyand, l. mattinen, m. pirhonen, g. anderluh, h. u. seitz, t. nuernberger, c. oecking
Keywords: phytopathogenic, oomycete
- 3gnz.pdb.
toxin 18-mar-09 3gnz
Mg
Title: toxin fold for microbial attack and plant defense
Author: c. ottmann, b. luberacki, i. kuefner, w. koch, f. brunner, m. weyand, l. mattinen, m. pirhonen, g. anderluh, h. u. seitz, t. nuernberger, c. oecking
Keywords: necrosi, ethyleneinducing, immunityassociated responses, plants
- 3gov.pdb.
hydrolase 20-mar-09 3gov
Title: crystal structure of the catalytic region of human masp-1
Author: v. harmat, j. dobo, l. beinrohr, e. sebestyen, p. zavodszky, p. gal
Keywords: serine protease, beta barrel, hydrolase, hydroxylation, immune response, innate immunity, sushi, coagulation, complement pathway, disulfide bond, egf-like domain, glycoprotein, polymorphism, protease
- 3gqu.pdb.
rna binding protein 24-mar-09 3gqu
I
Title: pyrococcus horikoshii nop5 rna binding domain
Author: f. e. reyes, j. w. hardin, r. t. batey
Keywords: rna binding protein
- 3gqx.pdb.
rna binding protein 24-mar-09 3gqx
I
Title: pyrococcus horikoshii nop5 rna binding domain from a twinned crystal form
Author: f. e. reyes, j. w. hardin, r. t. batey
Keywords: rna binding protein
- 3gtg.pdb.
transcription, transferase/dna/rna hybri27-mar-09 3gtg
Mg Zn
Title: backtracked rna polymerase ii complex with 12mer rna
Author: d. wang, d. a. bushnell, x. huang, k. d. westover, m. levitt, r. d. kornberg
Keywords: zinc-finger, polymorphism, cytoplasm, dna damage, dna repair, transferase/dna/rna hybrid complex
- 3gtj.pdb.
transcription, transferase/dna-rna hybri27-mar-09 3gtj
Mg Zn
Title: backtracked rna polymerase ii complex with 13mer rna
Author: d. wang, d. a. bushnell, x. huang, k. d. westover, m. levitt, r. d. kornberg
Keywords: zinc-finger, polymorphism, cytoplasm, dna damage, dna repair
- 3gtk.pdb.
transcription, transferase/dna-rna hybri27-mar-09 3gtk
Zn
Title: backtracked rna polymerase ii complex with 18mer rna
Author: d. wang, d. a. bushnell, x. huang, k. d. westover, m. levitt, r. d. kornberg
Keywords: zinc-finger, polymorphism, cytoplasm, dna damage, dna repair
- 3gtl.pdb.
transcription, transferase/dna-rna hybri27-mar-09 3gtl
Mg Zn
Title: backtracked rna polymerase ii complex with 13mer with g<>u mismatch
Author: d. wang, d. a. bushnell, x. huang, k. d. westover, m. levitt, r. d. kornberg
Keywords: zinc-finger, polymorphism, cytoplasm, dna damage, dna repair, transferase/dna-rna hybrid complex
- 3gtm.pdb.
transcription, transferase/dna-rna hybri27-mar-09 3gtm
Mg Zn
Title: co-complex of backtracked rna polymerase ii with tfiis
Author: d. wang, d. a. bushnell, x. huang, k. d. westover, m. levitt, r. d. kornberg
Keywords: zinc-finger, polymorphism, cytoplasm, dna damage, dna repair, transcription regulation, transferase/dna-rna hybrid complex
- 3gto.pdb.
transcription, transferase/dna-rna hybri27-mar-09 3gto
Mg Zn
Title: backtracked rna polymerase ii complex with 15mer rna
Author: d. wang, d. a. bushnell, x. huang, k. d. westover, m. levitt, r. d. kornberg
Keywords: zinc-finger, polymorphism, cytoplasm, dna damage, dna repair, transferase/dna-rna hybrid complex
- 3gtp.pdb.
transcription, transferase/dna-rna hybri27-mar-09 3gtp
Mg Zn
Title: backtracked rna polymerase ii complex with 24mer rna
Author: d. wang, d. a. bushnell, x. huang, k. d. westover, m. levitt, r. d. kornberg
Keywords: zinc-finger, polymorphism, cytoplasm, dna damage, dna repair, transferase/dna-rna hybrid complex
- 3gtq.pdb.
transcription, transferase/dna-rna hybri27-mar-09 3gtq
Zn
Title: backtracked rna polymerase ii complex induced by damage
Author: d. wang, d. a. bushnell, x. huang, k. d. westover, m. levitt, r. d. kornberg
Keywords: zinc-finger, polymorphism, cytoplasm, dna damage, dna repair, transferase/dna-rna hybrid complex
- 3gva.pdb.
dna binding protein 30-mar-09 3gva
Title: crystal structure analysis of s. pombe atl
Author: j. l. tubbs, a. s. arvai, j. a. tainer
Keywords: dna damage, dna repair, dna- binding, dna binding protein
- 3gvp.pdb.
hydrolase 31-mar-09 3gvp
Title: human sahh-like domain of human adenosylhomocysteinase 3
Author: m. i. siponen, m. wisniewska, c. h. arrowsmith, h. berglund, c. bountra, r. collins, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, t. karlberg, t. kotenyova, l. lehtio, m. moche, p. nordlund, t. nyman, c. persson, j. sagemark, p. schutz, a. g. thorsell, l. tresaugues, s. van den berg, j. weigelt, m. welin, h. schueler
Keywords: hydrolase, nad, one-carbon metabolism, phosphoprotein
- 3gx4.pdb.
dna binding protein/dna 01-apr-09 3gx4
Co
Title: crystal structure analysis of s. pombe atl in complex with dna
Author: j. l. tubbs, a. s. arvai, j. a. tainer
Keywords: dna damage, dna repair, dna-binding, dna binding protein/dna complex
- 3gyk.pdb.
oxidoreductase 03-apr-09 3gyk
Se
Title: the crystal structure of a thioredoxin-like oxidoreductase from silicibacter pomeroyi dss-3
Author: y. fan, n. marshall, l. keigher, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: silicibacter pomeroyi dss-3, thioredoxin-like, oxidoreductase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 3gz5.pdb.
dna binding protein 06-apr-09 3gz5
Na
Title: crystal structure of shewanella oneidensis nrtr
Author: n. huang, h. zhang
Keywords: nudix domain, whth domain
- 3gz6.pdb.
dna binding protein/dna 06-apr-09 3gz6
Na
Title: crystal structure of shewanella oneidensis nrtr complexed with a 27mer dna
Author: n. huang, h. zhang
Keywords: nudix domain, whth domain, dna binding protein/dna complex
- 3gz8.pdb.
dna binding protein 06-apr-09 3gz8
Title: cocrystal structure of nudix domain of shewanella oneidensis nrtr complexed with adp ribose
Author: n. huang, h. zhang
Keywords: nudix domain, whth domain
- 3h09.pdb.
hydrolase 08-apr-09 3h09
Na
Title: the structure of haemophilus influenzae iga1 protease
Author: t. a. johnson, j qiu, a. g. plaut, t. holyoak
Keywords: immunoglobulin a1, beta helix, hydrolase, membrane, protease, secreted, transmembrane, virulence, zymogen
- 3h0a.pdb.
transcription 08-apr-09 3h0a
F
Title: crystal structure of peroxisome proliferator-activated receptor gamma (pparg) and retinoic acid receptor alpha (rxra) in complex with 9-cis retinoic acid, co-activator peptide, and a partial agonist
Author: z. wang, a. sudom, n. p. walker
Keywords: transferase
- 3h0c.pdb.
hydrolase 09-apr-09 3h0c
Cl
Title: crystal structure of human dipeptidyl peptidase iv (cd26) in complex with a reversed amide inhibitor
Author: s. nordhoff, s. cerezo-galvez, h. deppe, o. hill, m. lopez-canet, c. rummey, m. thiemann, v. g. matassa, p. j. edwards, a. feurer
Keywords: dpp-iv, diabetes mellitus, drug design, hydrolase, serine protease, aminopeptidase, glycoprotein, protease, signal-anchor, transmembrane, cell membrane, disulfide bond, membrane, secreted
- 3h1x.pdb.
hydrolase 14-apr-09 3h1x
Cl
Title: simultaneous inhibition of anti-coagulation and inflammation: crystal structure of phospholipase a2 complexed with indomethacin at 1.4 a resolution reveals the presence of the new common ligand binding site
Author: n. singh, r. prem kumar, s. sharma, p. kaur, t. p. singh
Keywords: anti-inflammatory, anti-coagulant, indomethacin, crystal structure, hydrolase
- 3h27.pdb.
oxidoreductase 14-apr-09 3h27
Title: 3-d x-ray structure of the sulfide:quinone oxidoreductase from the hyperthermophilic bacterium aquifex aeolicus
Author: m. marcia, u. ermler, g. h. peng, h. michel
Keywords: monotopic membrane protein, flavoprotein, rossmann-fold domain, oxidoreductase
- 3h28.pdb.
oxidoreductase 14-apr-09 3h28
Title: 3-d x-ray structure of the sulfide:quinone oxidoreductase of the hyperthermophilic bacterium aquifex aeolicus in complex with decylubiquinone
Author: m. marcia, u. ermler, g. h. peng, h. michel
Keywords: flavoprotein, polysulfur, oxidoreductase
- 3h29.pdb.
oxidoreductase 14-apr-09 3h29
Title: 3-d x-ray structure of the sulfide:quinone oxidoreductase from aquifex aeolicus in complex with aurachin c
Author: m. marcia, u. ermler, g. h. peng, h. michel
Keywords: sulfide oxidation, rossmann-fold domain, flavoprotein, quinone reduction, oxidoreductase
- 3h43.pdb.
hydrolase 17-apr-09 3h43
Se
Title: n-terminal domain of the proteasome-activating nucleotidase of methanocaldococcus jannaschii
Author: p. d. jeffrey, f. zhang, m. hu, g. tian, p. zhang, d. finley, y. shi
Keywords: regulatory particle, nucleosidase, atp-binding, cytoplasm, nucleotide-binding, hydrolase
- 3h4m.pdb.
hydrolase 20-apr-09 3h4m
Title: aaa atpase domain of the proteasome- activating nucleotidase
Author: p. jeffrey, f. zhang, m. hu, g. tian, p. zhang, d. finley, y. shi
Keywords: proteasome, pan, atp-binding, cytoplasm, nucleotide- binding, hydrolase
- 3h4p.pdb.
hydrolase 20-apr-09 3h4p
Title: proteasome 20s core particle from methanocaldococcus jannaschii
Author: p. d. jeffrey, f. zhang, m. hu, g. tian, p. zhang, d. finley, y. shi
Keywords: proteasome, core particle, cytoplasm, hydrolase, protease, threonine protease
- 3h5v.pdb.
transport protein 22-apr-09 3h5v
Title: crystal structure of the glur2-atd
Author: r. jin, s. k. singh, s. gu, h. furukawa, a. sobolevsky, j. zhou, y. jin, e. gouaux
Keywords: phosphoprotein, postsynaptic cell membrane, receptor, rna editing, transmembrane, transport, transport protein
- 3h5w.pdb.
transport protein 22-apr-09 3h5w
Title: crystal structure of the glur2-atd in space group p212121 without solvent
Author: r. jin, s. k. singh, s. gu, h. furukawa, a. sobolevsky, j. zhou, y. jin, e. gouaux
Keywords: phosphoprotein, postsynaptic cell membrane, receptor, rna editing, transmembrane, transport, transport protein
- 3h8m.pdb.
transferase 29-apr-09 3h8m
Title: sam domain of human ephrin type-a receptor 7 (epha7)
Author: j. r. walker, l. yermekbayeva, c. butler-cole, c. bountra, j. weigelt, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: transmembrane, tyrosine-protein kinase
- 3hcv.pdb.
immune system 06-may-09 3hcv
Title: crystal structure of hla-b*2709 complexed with the double citrullinated vasoactive intestinal peptide type 1 receptor (vipr) peptide (residues 400-408)
Author: a. beltrami, a. gabdulkhakov, m. rossmann, a. ziegler, b. uchanska- ziegler, w. saenger
Keywords: disease mutation, glycation, pyrrolidone carboxylic acid, secreted, disulfide bond, mhc i
- 3he2.pdb.
lyase 07-may-09 3he2
Title: crystal structure of enoyl-coa hydratase from mycobacterium tuberculosis
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: enoyl-coa hydratase, fatty acid metabolism, lipid metabolism, lyase, structural genomics, seattle structural genomics center for infectious disease, ssgcid
- 3hfr.pdb.
isomerase 12-may-09 3hfr
Cl Se
Title: crystal structure of glutamate racemase from listeria monocytogenes
Author: k. a. majorek, m. chruszcz, m. d. zimmerman, m. m. klimecka, m. cymborowski, t. skarina, o. onopriyenko, j. stam, z. otwinowski, w. f. anderson, a. savchenko, w. minor, center for structural genomics of infectious diseases (csgid)
Keywords: structural genomics, sad, cell shape, cell wall biogenesis/degradation, isomerase, peptidoglycan synthesis, center for structural genomics of infectious diseases, csgid
- 3hfu.pdb.
transcription 12-may-09 3hfu
Se
Title: crystal structure of the ligand binding domain of e. coli cynr with its specific effector azide
Author: a. u. singer, e. evdokimova, o. kagan, a. dong, a. m. edwards, a. savchenko
Keywords: lysr transcriptional activiator, effector, azide, activator, cytoplasm, dna-binding, repressor, transcription, transcription regulation
- 3hh8.pdb.
metal binding protein 15-may-09 3hh8
Fe
Title: crystal structure and metal binding properties of the lipoprotein mtsa
Author: e. n. baker, h. m. baker, x. sun, q. -y. ye
Keywords: metal binding, cell membrane, copper, copper transport, ion transport, iron, iron transport, membrane, metal-binding, palmitate, transport, zinc, zinc transport, metal binding protein
- 3hih.pdb.
transferase 20-may-09 3hih
Title: structure of human plk1-pbd with glycerol and sulfate in the phophopeptide binding site
Author: a. wlodawer, t. moulaei
Keywords: serine/threonine-protein kinase
- 3hik.pdb.
transferase 20-may-09 3hik
Title: structure of human plk1-pbd in complex with plhspt
Author: a. wlodawer, t. moulaei
Keywords: serine/threonine protein kinase, cell cycle, localization, atp-binding, cell division, mitosis, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
- 3hil.pdb.
transferase 20-may-09 3hil
Cl
Title: sam domain of human ephrin type-a receptor 1 (epha1)
Author: j. r. walker, l. yermekbayeva, c. butler-cole, j. weigelt, c. bountra, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: transmembrane
- 3hjv.pdb.
transferase 22-may-09 3hjv
Cl Se
Title: 1.7 angstrom resolution crystal structure of an acyl carrier protein s-malonyltransferase from vibrio cholerae o1 biovar eltor str. n16961
Author: a. s. halavaty, z. wawrzak, s. anderson, t. skarina, o. onopriyenko, k. kwon, a. savchenko, w. f. anderson, center for structural genomics of infectious diseases (csgid)
Keywords: structural genomics, infectious diseases, center for structural genomics of infectious diseases, csgid
- 3hjz.pdb.
transferase 22-may-09 3hjz
Cl Na Se
Title: the structure of an aldolase from prochlorococcus marinus
Author: a. u. singer, x. xu, h. cui, a. joachimiak, a. m. edwards, a. savchenko, midwest center for structural genomics (mcsg)
Keywords: midwest center for structural genomics, mcsg, cytoplasm, pentose shunt, transferase
- 3hk4.pdb.
isomerase 22-may-09 3hk4
Se
Title: crystal structure of ntf2-like protein of unknown function (np_107719.1) from mesorhizobium loti at 1.96 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: ntf2-like protein of unknown function, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, isomerase
- 3hkx.pdb.
hydrolase 26-may-09 3hkx
Title: crystal structure analysis of an amidase from nesterenkonia sp.
Author: b. t. sewell, a. j. m. nel, d. a. cowan
Keywords: hydrolase
- 3hkz.pdb.
transferase 26-may-09 3hkz
Mg Zn Fe
Title: the x-ray crystal structure of rna polymerase from archaea
Author: k. s. murakami
Keywords: archaea, sulfolobus solfataricus, dna- directed rna polymerase, metal-binding, nucleotidyltransferase, transcription, transferase, zinc, zinc-finger
- 3hl1.pdb.
structural genomics, unknown function 26-may-09 3hl1
Se
Title: crystal structure of ferritin like protein from caulobacter crescentus cb15 (np_419375.1) from caulobacter crescentus at 1.95 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: ferritin like protein from caulobacter crescentus cb15, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, ferritin-like protein, unknown function
- 3hl3.pdb.
transferase 26-may-09 3hl3
Title: 2.76 angstrom crystal structure of a putative glucose-1- phosphate thymidylyltransferase from bacillus anthracis in complex with a sucrose.
Author: g. minasov, l. shuvalova, a. halavaty, i. dubrovska, j. winsor, l. papazisi, w. f. anderson, center for structural genomics of infectious diseases (csgid)
Keywords: idp01254, sucrose, transferase, structural genomics, center for structural genomics of infectious diseases, csgid
- 3hly.pdb.
flavoprotein 28-may-09 3hly
Ca Se
Title: crystal structure of the flavodoxin-like domain from synechococcus sp q5mzp6_synp6 protein. northeast structural genomics consortium target snr135d.
Author: s. vorobiev, m. su, d. lee, c. ciccosanti, s. sahdev, r. xiao, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: flavoprotein, flavodoxin-like domain, dfa1, snr135d, nesg, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
- 3hm0.pdb.
hydrolase 28-may-09 3hm0
Title: crystal structure of probable thioesterase from bartonella henselae
Author: seattle structural genomics center for infectious diseases (ssgcid)
Keywords: seattle structural genomics center for infectious disease
- 3hm6.pdb.
signaling protein 28-may-09 3hm6
Title: crystal structure of the cytoplasmic domain of human plexin b1
Author: y. tong, h. he, l. shen, w. tempel, f. mackenzie, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: sgc, membrane, transmembrane, receptor, alternative splicing, cell membrane, coiled coil, glycoprotein, phosphoprotein, polymorphism, secreted, signaling protein
- 3hm7.pdb.
hydrolase 28-may-09 3hm7
Zn
Title: crystal structure of allantoinase from bacillus halodurans c-125
Author: y. patskovsky, r. romero, m. rutter, s. miller, s. r. wasserman, j. m. sauder, f. m. raushel, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc), new york sgx research center for structural genomics (nysgxrc)
Keywords: purine metabolism, zinc, new york sgx research center for structural genomics
- 3hn2.pdb.
oxidoreductase 29-may-09 3hn2
Title: crystal structure of 2-dehydropantoate 2-reductase from geobacter metallireducens gs-15
Author: y. patskovsky, r. toro, c. morano, m. rutter, s. chang, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: psi-2, nysgxrc, structural genomics, protein structure initiative, new york sgx research center for structural genomics, nadp, oxidoreductase, pantothenate biosynthesis
- 3hn6.pdb.
isomerase 29-may-09 3hn6
Title: crystal structure of glucosamine-6-phosphate deaminase from borrelia burgdorferi
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: seattle structural genomics center for infectious disease
- 3hna.pdb.
hydrolase/hydrolase regulator 30-may-09 3hna
Zn
Title: crystal structure of catalytic domain of human euchromatic histone methyltransferase 1 in complex with sah and mono- methylated h3k9 peptide
Author: j. min, h. wu, p. loppnau, j. wleigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: s-adenosyl-l-methionine, transferase, zinc, hydrolase/hydrolase regulator complex
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Metalloprotein Structure and Design project home page:
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Computational Center for Macromolecular Structure home page:
www.sdsc.edu/CCMS