Recent PDB releases or updates: week of 6 March 2009
- 1b0k.pdb.
lyase 11-nov-98 1b0k
Fe
Title: s642a:fluorocitrate complex of aconitase
Author: s. j. lloyd, h. lauble, g. s. prasad, c. d. stout
Keywords: iron-sulfur, mitochondrion, transit peptide, lyase
- 2k0p.pdb.
protein binding 11-feb-08 2k0p
He
(solid-state NMR)
Title: determination of a protein structure in the solid state from nmr chemical shifts
Author: p. robustelli, a. cavalli, x. salvatella, m. vendruscolo
Keywords: chemical shift restraints, gb1, cell wall, igg- binding protein, peptidoglycan-anchor, secreted, protein binding
- 2k1d.pdb.
unknown function 29-feb-08 2k1d
He Hg
(solution NMR)
Title: nmr studies of a pathogenic mutant (d178n) of the human prion protein
Author: j. l. mills, k. surewicz, w. k. surewicz, f. d. sonnichsen
Keywords: m/v 129 polymorphism, d178n, disease mutation, ffi, gss, glycoprotein, golgi apparatus, gpi- anchor, lipoprotein, membrane, unknown function
- 2k4p.pdb.
signaling protein 16-jun-08 2k4p
He Hg
(solution NMR)
Title: solution structure of ship2-sam
Author: m. leone, m. pellecchia
Keywords: sh3-binding
- 2k7r.pdb.
replication 19-aug-08 2k7r
He Hg Zn
(solution NMR)
Title: n-terminal domain of the bacillus subtilis helicase-loading protein dnai
Author: n. v. loscha, k. jaudzems, c. ioannou, x. su, n. e. dixon
Keywords: helicase-loading protein, atp- binding, dna replication, nucleotide-binding, primosome
- 2k8f.pdb.
transferase/transcription 08-sep-08 2k8f
He Hg
(solution NMR)
Title: structural basis for the regulation of p53 function by p300
Author: y. bai, h. feng, l. m. jenkins, s. r. durell, a. wiodawer, e. appella
Keywords: endoplasmic reticulum, glycoprotein, li-fraumeni syndrome, ubl conjugation, transferase/transcription complex
- 2ke0.pdb.
isomerase 21-jan-09 2ke0
He Hg
(solution NMR)
Title: solution structure of peptidyl-prolyl cis-trans isomerase from burkholderia pseudoomallei
Author: s. zheng, t. leeper, a. napuli, s. h. nakazawa, g. varani, seattle structural genomics center for infectious disease (ssgcid)
Keywords: bupsa.00130.a, fk506 binding protein fkbp, nmr, isomerase, structural genomics, seattle structural genomics center for infectious disease, ssgcid
- 2ke4.pdb.
membrane protein 22-jan-09 2ke4
He Hg
(solution NMR)
Title: the nmr structure of the tc10 and cdc42 interacting domain of cip4
Author: h. kumeta, d. kanoh, y. kobashigawa, f. inagaki
Keywords: membrane protein
- 2keo.pdb.
ligase 30-jan-09 2keo
He Hg
(solution NMR)
Title: solution nmr structure of human protein hs00059, cytochrome- b5-like domain of the herc2 e3 ligase. northeast structural genomics consortium (nesg) target ht98a
Author: a. lemak, a. gutmanas, c. fares, h. quyang, y. li, g. montelione, c. arrowsmith, s. dhe-paganon, northeast structural genomics consortium (nesg)
Keywords: northeast structural genomics consortium, nesg
- 2qc7.pdb.
chaperone 19-jun-07 2qc7
Title: crystal structure of the protein-disulfide isomerase related chaperone erp29
Author: n. n. barak, m. sevvana, p. neumann, m. malesevic, k. naumann, g. fischer, g. m. sheldrick, m. t. stubbs, d. m. ferrari
Keywords: d domain (residues 154-261), chaperone
- 2qlq.pdb.
transferase 13-jul-07 2qlq
Br
Title: crystal structure of src kinase domain with covalent inhibitor rl3
Author: a. michalczyk, h. b. rode, c. gruetter, d. rauh
Keywords: transferase, tyrosine-protein kinase
- 2ro2.pdb.
rna 05-mar-08 2ro2
Ho
(solution NMR)
Title: solution structure of domain i of the negative polarity cchmvd hammerhead ribozyme
Author: j. gallego, d. dufour, s. gago, m. de la pena, r. flores
Keywords: viroid, cchmvd, heptaloop, rna
- 2roe.pdb.
metal binding protein 20-mar-08 2roe
He Hg
(solution NMR)
Title: solution structure of thermus thermophilus hb8 ttha1718 protein in vitro
Author: d. sakakibara, a. sasaki, t. ikeya, j. hamatsu, h. koyama, m. mishima, t. mikawa, m. waelchli, b. o. smith, m. shirakawa, p. guentert, y. ito
Keywords: metal binding protein
- 2rog.pdb.
metal binding protein 21-mar-08 2rog
He Hg
(solution NMR)
Title: solution structure of thermus thermophilus hb8 ttha1718 protein in living e. coli cells
Author: d. sakakibara, a. sasaki, t. ikeya, j. hamatsu, h. koyama, m. mishima, t. mikawa, m. waelchli, b. o. smith, m. shirakawa, p. guentert, y. ito
Keywords: metal binding protein
- 2rol.pdb.
splicing/signaling protein 02-apr-08 2rol
He Hg
(solution NMR)
Title: structural basis of pxxdy motif recognition in sh3 binding
Author: o. aitio, m. hellman, t. kesti, i. kleino, o. samuilova, h. tossavainen, k. paakkonen, k. saksela, p. permi
Keywords: splicing/signaling protein complex
- 2rou.pdb.
dna 20-apr-08 2rou
Ho
(solution NMR)
Title: stereospecific conformations of n2-dg 1r-trans-anti- benzo[c]phenanthrene dna adducts: 3'-intercalation of the 1r adduct and 5'-minor groove orientation of the 1s adduct in an iterated (cg)3 repeat
Author: y. wang, h. kroth, h. yagi, j. m. sayer, s. kumar, d. m. jerina, m. p. stone
Keywords: dna
- 2rpk.pdb.
rna 28-may-08 2rpk
Ho
(solution NMR)
Title: solution structure of domain ii of the positive polarity cchmvd hammerhead ribozyme
Author: j. gallego, d. dufour, m. de la pena, s. gago, r. flores
Keywords: viroid, cchmvd, hexaloop, rna
- 2v4x.pdb.
viral protein 30-sep-08 2v4x
Se
Title: crystal structure of jaagsiekte sheep retrovirus capsid n- terminal domain
Author: g. b. mortuza, d. c. goldstone, c. pashley, l. f. haire, m. palmarini, w. r. taylor, j. p. stoye, i. a. taylor
Keywords: capsid, virion, retrovirus, zinc-finger, metal-binding, capsid protein, structural protein, viral nucleoprotein, viral matrix protein, viral protein
- 2vsp.pdb.
transport protein 28-apr-08 2vsp
Title: crystal structure of the fourth pdz domain of pdz domain- containing protein 1
Author: w. w. yue, n. shafqat, e. s. pilka, c. johansson, j. w. murray, j. elkins, a. roos, c. cooper, c. phillips, e. salah, f. von delft, d. doyle, a. edwards, m. wikstrom, c. arrowsmith, c. bountra, u. oppermann
Keywords: membrane, cytoplasm, phosphoprotein, transport protein, casp
- 2vx9.pdb.
flavoprotein 01-jul-08 2vx9
Cl Na
Title: h. salinarum dodecin e45a mutant
Author: m. grininger, h. staudt, p. johansson, j. wachtveitl, d. oesterhelt
Keywords: flavin, archaea, dodecin, riboflavin, lumichrome
- 2vxa.pdb.
flavoprotein 01-jul-08 2vxa
Cl
Title: h.halophila dodecin in complex with riboflavin
Author: m. grininger, h. staudt, p. johansson, j. wachtveitl, d. oesterhelt
Keywords: dodecin, flavin, riboflavin, lumichrome, archaea
- 2vxh.pdb.
oxidoreductase 04-jul-08 2vxh
Fe
Title: the crystal structure of chlorite dismutase: a detox enzyme producing molecular oxygen
Author: d. c. de geus, e. a. j. thomassen, p. l. hagedoorn, n. s. pannu, j. p. abrahams
Keywords: chlorite dismutase, azospira oryzae strain gr-1, oxidoreductase, chlorate respiration, molecular oxygen production
- 2vz7.pdb.
oxidoreductase 30-jul-08 2vz7
Fe
Title: crystal structure of the yc-17-bound pikc d50n mutant
Author: s. li, d. h. sherman, l. m. podust
Keywords: antibiotic biosynthesis, pikc, iron, heme, cyp107l1, monooxygenase, macrolide monooxygenase, metal-binding, cytochrome p450
- 2vzm.pdb.
oxidoreductase 01-aug-08 2vzm
Fe
Title: crystal structure of the narbomycin-bound pikc d50n mutant
Author: s. li, d. h. sherman, l. m. podust
Keywords: pikc, iron, heme, cyp107l1, monooxygenase, antibiotic biosynthesis, macrolide monooxygenase, metal-binding, cytochrome p450
- 2w02.pdb.
metal transport 08-aug-08 2w02
Mg
Title: co-complex structure of achromobactin synthetase protein d ( acsd) with atp from pectobacterium chrysanthemi
Author: s. schmelz, s. a. mcmahon, n. kadi, l. song, d. oves-costales, m. oke, h. liu, k. a. johnson, l. carter, m. f. white, g. l. challis, j. h. naismith
Keywords: acsd, achromobactin biosynthesis, metal transport, pectobacterium chrysanthemi
- 2w03.pdb.
metal transport 08-aug-08 2w03
Title: co-complex structure of achromobactin synthetase protein d ( acsd) with adenosine, sulfate and citrate from pectobacterium chrysanthemi
Author: s. schmelz, s. a. mcmahon, n. kadi, l. song, d. oves-costales, m. oke, h. liu, k. a. johnson, l. carter, m. f. white, g. l. challis, j. h. naismith
Keywords: acsd, achromobactin biosynthesis, metal transport, pectobacterium chrysanthemi
- 2w04.pdb.
metal transport 08-aug-08 2w04
Title: co-complex structure of achromobactin synthetase protein d ( acsd) with citrate in atp binding site from pectobacterium chrysanthemi
Author: s. schmelz, s. a. mcmahon, n. kadi, l. song, d. oves-costales, m. oke, h. liu, k. a. johnson, l. carter, m. f. white, g. l. challis, j. h. naismith
Keywords: pectobacterium chrysanthemi, achromobactin biosynthesis, sspf, metal transport
- 2w0d.pdb.
hydrolase 13-aug-08 2w0d
Cl Zn Na Ca
Title: does a fast nuclear magnetic resonance spectroscopy- and x-ray crystallography hybrid approach provide reliable structural information of ligand-protein complexes? a case study of metalloproteinases.
Author: j. isaksson, s. nystrom, d. j. derbyshire, h. wallberg, t. agback, h. kovacs, i. bertini, i. c. felli
Keywords: metal-binding, metalloprotease, secreted, hydrolase, hydroxamate, polymorphism, extracellular matrix, zinc, copd, mmp-12, calcium, zymogen, protease
- 2w1r.pdb.
transcription 20-oct-08 2w1r
Title: crystal structure of the c-terminal domain of b. subtilis spovt
Author: i. asen, s. djuranovic, a. n. lupas, k. zeth
Keywords: transcription, transcription regulation, repressor, activator, sporulation, dna-binding
- 2w1t.pdb.
transcription 20-oct-08 2w1t
Title: crystal structure of b. subtilis spovt
Author: i. asen, s. djuranovic, a. n. lupas, k. zeth
Keywords: transcription regulation, repressor, activator, sporulation, dna-binding, gaf domain regulated tetrameric spovt
- 2w3c.pdb.
transport protein 11-nov-08 2w3c
Title: globular head region of the human general vesicular transport factor p115
Author: h. striegl, y. roske, d. kummel, u. heinemann,
Keywords: coiled coil, armadillo fold, golgi apparatus, er-golgi transport, endoplasmatic reticulum, p115, golgi, uso1p, golgin, membrane, cytoplasm, transport protein
- 2w4r.pdb.
hydrolase 01-dec-08 2w4r
Hg
Title: crystal structure of the regulatory domain of human lgp2
Author: d. a. pippig, j. c. hellmuth, s. cui, a. kirchhofer, k. lammens, a. lammens, a. schmidt, s. rothenfusser, k. p. hopfner
Keywords: immune response, nucleotide-binding, coiled coil, atp-binding, polymorphism, double-strand rna binding protein, helicase, hydrolase, cytoplasm, rna-binding
- 2w5n.pdb.
hydrolase 11-dec-08 2w5n
Title: native structure of the gh93 alpha-l-arabinofuranosidase of fusarium graminearum
Author: r. carapito, a. imberty, j. m. jeltsch, s. c. byrns, p. h. tam, t. l. lowary, a. varrot, v. phalip
Keywords: alpha-l-arabinofuranosidase, glycosyl hydrolase, gh93
- 2w5o.pdb.
hydrolase 11-dec-08 2w5o
Se
Title: complex structure of the gh93 alpha-l-arabinofuranosidase of fusarium graminearum with arabinobiose
Author: r. carapito, a. imberty, j. m. jeltsch, s. c. byrns, p. h. tam, t. l. lowary, a. varrot, v. phalip
Keywords: alpha-l-arabinofuranosidase, glycosyl hydrolase, gh93, arabinobiose
- 2w80.pdb.
immune system 08-jan-09 2w80
Title: structure of a complex between neisseria meningitidis factor h binding protein and ccps 6-7 of human complement factor h
Author: m. c. schneider, b. e. prosser, j. j. e. caeser, e. kugelberg, s. li, q. zhang, s. quoraishi, j. e. lovett, j. e. deane, r. b. sim, p. roversi, s. johnson, c. m. tang, s. m. lea
Keywords: complement alternate pathway, vaccine candidate, alternative splicing, immune system
- 2w81.pdb.
immune system 08-jan-09 2w81
Title: structure of a complex between neisseria meningitidis factor h binding protein and ccps 6-7 of human complement factor h
Author: m. c. schneider, b. e. prosser, j. j. e. caeser, e. kugelberg, s. li, q. zhang, s. quoraishi, j. e. lovett, j. e. deane, r. b. sim, p. roversi, s. johnson, c. m. tang, s. m. lea
Keywords: complement alternate pathway, vaccine candidate, alternative splicing, immune system
- 2w8d.pdb.
transferase 15-jan-09 2w8d
Mg Se
Title: distinct and essential morphogenic functions for wall- and lipo-teichoic acids in bacillus subtilis
Author: k. schirner, j. marles-wright, r. j. lewis, j. errington
Keywords: phosphatase, cell membrane, transmembrane, lta, wta, membrane, secreted, cell wall, b.subtilis, lipotechoic acid, cell wall biogenesis/degradation acid
- 2wac.pdb.
splicing 04-feb-09 2wac
Title: extended tudor domain of drosophila melanogaster tudor-sn ( p100)
Author: a. friberg, l. corsini, m. sattler
Keywords: tudor, beta-barrel, nuclease domain, tudor-sn, p100, snd1, methylated arginine, sdma, splicing
- 2wad.pdb.
peptide binding protein 05-feb-09 2wad
Zn
Title: penicillin-binding protein 2b (pbp-2b) from streptococcus pneumoniae (strain 5204)
Author: c. contreras-martel, c. dahout-gonzalez, a. dos-santos-martins, m. kotnik, a. dessen
Keywords: peptide binding protein
- 2wae.pdb.
peptide binding protein 05-feb-09 2wae
Zn
Title: penicillin-binding protein 2b (pbp-2b) from streptococcus pneumoniae (strain 5204)
Author: c. contreras-martel, c. dahout-gonzalez, a. dos-santos-martins, m. kotnik, a. dessen
Keywords: peptide binding protein
- 2waf.pdb.
peptide binding protein 05-feb-09 2waf
Cl
Title: penicillin-binding protein 2b (pbp-2b) from streptococcus pneumoniae (strain r6)
Author: c. contreras-martel, c. dahout-gonzalez, a. dos-santos-martins, m. kotnik, a. dessen
Keywords: peptide binding protein
- 2wal.pdb.
apoptosis 09-feb-09 2wal
Title: crystal structure of human gadd45gamma
Author: s. bhattacharya, j. j. mueller, y. roske, a. p. turnbull, c. quedenau, f. goetz, k. buessow, u. heinemann
Keywords: developmental protein, gadd, apoptosis, dna damage, g2/m phase, polymorphism, cdc2/cyclinb1, differentiation
- 2wb6.pdb.
viral protein 22-feb-09 2wb6
Cl
Title: crystal structure of afv1-102, a protein from the acidianus filamentous virus 1
Author: j. keller, n. leulliot, b. collinet, v. campanacci, c. cambillau, d. pranghisvilli, h. van tilbeurgh
Keywords: viral protein
- 2wb7.pdb.
unknown function 22-feb-09 2wb7
Se
Title: pt26-6p
Author: j. keller, n. leulliot, n. soler, b. collinet, r. vincentelli, p. forterre, h. van tilbeurgh
Keywords: unknown function
- 2zni.pdb.
ligase/rna 25-apr-08 2zni
Ca
Title: crystal structure of pyrrolysyl-trna synthetase-trna(pyl) complex from desulfitobacterium hafniense
Author: k. nozawa, y. araiso, d. soll, r. ishitani, o. nureki
- 2znj.pdb.
ligase 25-apr-08 2znj
Title: crystal structure of pyrrolysyl-trna synthetase from desulfitobacterium hafniense
Author: k. nozawa, y. araiso, d. soll, r. ishitani, o. nureki
- 2zrq.pdb.
hydrolase 28-aug-08 2zrq
Ca
Title: crystal structure of s324a-subtilisin
Author: s. tanaka, y. takeuchi, h. matsumura, y. koga, k. takano, s. kanaya
Keywords: thermococcus kodakaraensis, crystal structure, calcium, hydrolase, protease, secreted, serine protease, zymogen
- 2zv6.pdb.
hydrolase inhibitor 01-nov-08 2zv6
Title: crystal structure of human squamous cell carcinoma antigen 1
Author: b. zheng, y. matoba, c. katagiri, t. hibino, m. sugiyama
Keywords: reactive site loop, acetylation, alternative splicing, cytoplasm, polymorphism, protease inhibitor, serine protease inhibitor, hydrolase inhibitor
- 2zw0.pdb.
immune system 26-nov-08 2zw0
Title: crystal structure of a streptococcal protein g b1 mutant
Author: h. watanabe, h. matsumaru, t. odahara, k. suto, s. honda
Keywords: ph-dependent ligand binding, immune system
- 2zw1.pdb.
immune system 26-nov-08 2zw1
Title: crystal structure of a streptococcal protein g b1 mutant
Author: h. watanabe, h. matsumaru, t. odahara, k. suto, s. honda
Keywords: ph-dependent ligand binding, immune system
- 2zws.pdb.
hydrolase 17-dec-08 2zws
Mg Zn
Title: crystal structure analysis of neutral ceramidase from pseudomonas aeruginosa
Author: y. kakuta, n. okino, t. inoue, h. okano, m. ito
Keywords: hydrolase, lipid metabolism, secreted
- 2zyl.pdb.
oxidoreductase 27-jan-09 2zyl
Na Fe
Title: crystal structure of 3-ketosteroid-9-alpha-hydroxylase (ksha) from m. tuberculosis
Author: i. d'angelo, j. capyk, n. strynadka, l. eltis
Keywords: cholesterol, rieske, oxidoreductase
- 2zzp.pdb.
hydrolase/structural protein 22-feb-09 2zzp
Title: the crystal structure of human atg4b(c74s)- lc3(1-124) complex
Author: k. satoo, n. n. noda, f. inagaki
Keywords: cytoplasmic vesicle, lipoprotein, membrane, microtubule, hydrolase/structural protein complex
- 3bwo.pdb.
transferase 10-jan-08 3bwo
Title: l-tryptophan aminotransferase
Author: j. -l. ferrer, j. p. noel, f. pojer, m. bowman, j. chory, y. tao
Keywords: auxin synthesis, tryptophan, pyridoxal-5'- phosphate, indole-3-pyruvate
- 3c7u.pdb.
hydrolase/hydrolase inhibitor 08-feb-08 3c7u
Title: structural insight into the kinetics and cp of interactions between tem-1-lactamase and blip
Author: j. wang, d. -c. chow
Keywords: antibiotic resistance, hydrolase, plasmid, secreted, hydrolase/hydrolase inhibitor complex
- 3c7v.pdb.
hydrolase/hydrolase inhibitor 08-feb-08 3c7v
Title: structural insight into the kinetics and delta-cp of interactions between tem-1 beta-lactamase and blip
Author: j. wang, d. -c. chow
Keywords: antibiotic resistance, hydrolase, plasmid, secreted, hydrolase/hydrolase inhibitor complex
- 3c9i.pdb.
viral protein 15-feb-08 3c9i
Cl Ca Xe
Title: structure of p22 tail-needle gp26 bound to xenon gas
Author: g. cingolani, a. s. olia
Keywords: tail-needle, xenon, coiled-coil, protein fiber, coiled coil, late protein, viral protein
- 3ca9.pdb.
hydrolase 19-feb-08 3ca9
Mg
Title: evolution of chlorella virus dutpase
Author: m. yamanishi, k. homma, y. zhang, l. v. j. etten, h. moriyama
Keywords: hydrolase
- 3cbx.pdb.
protein binding 23-feb-08 3cbx
Cl
Title: the dvl2 pdz domain in complex with the c1 inhibitory peptide
Author: b. a. appleton, c. wiesmann
Keywords: phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, wnt signaling pathway, signaling protein, protein binding
- 3cby.pdb.
protein binding 23-feb-08 3cby
Title: the dvl2 pdz domain in complex with the n1 inhibitory peptide
Author: b. a. appleton, c. wiesmann
Keywords: phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, wnt signaling pathway, protein binding
- 3cbz.pdb.
protein binding 23-feb-08 3cbz
Title: the dvl2 pdz domain in complex with the n2 inhibitory peptide
Author: b. a. appleton, c. wiesmann
Keywords: phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, wnt signaling pathway, signaling protein, protein binding
- 3cc0.pdb.
protein binding 23-feb-08 3cc0
Title: the dvl2 pdz domain in complex with the n3 inhibitory peptide
Author: b. a. appleton, c. wiesmann
Keywords: phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, wnt signaling pathway, signaling protein, protein binding
- 3cc5.pdb.
immune system 24-feb-08 3cc5
Title: h-2db complex with human gp100
Author: d. badia-martinez, a. achour
Keywords: glycoprotein, immune response, membrane, mhc i, transmembrane, immunoglobulin domain, polymorphism, secreted, melanin biosynthesis, immune system
- 3cde.pdb.
transferase 26-feb-08 3cde
Title: crystal structure of hcv ns5b polymerase with a novel pyridazinone inhibitor
Author: q. zhao, r. e. showalter, q. han, c. r. kissinger
Keywords: transcription regulation, transferase, viral nucleoprotein, virion
- 3cee.pdb.
lipid binding protein 29-feb-08 3cee
F Zn Na
Title: three-dimensional structure of a post translational modified barley ltp1
Author: m. -b. lascombe, t. prange, b. bakan, d. marion
Keywords: post-transcriptional modification,oxylipin, lipid- binding, lipoprotein, transport, lipid binding protein
- 3ces.pdb.
rna binding protein 29-feb-08 3ces
Title: crystal structure of e.coli mnmg (gida), a highly-conserved trna modifying enzyme
Author: r. shi, a. matte, m. cygler, montreal-kingston bacterial structural genomics initiative (bsgi)
Keywords: fad binding domain, structural genomics, montreal-kingston bacterial structural genomics initiative, bsgi, rna binding protein
- 3cfm.pdb.
transport protein 04-mar-08 3cfm
Title: crystal structure of the apo form of human wild-type transthyretin
Author: l. -m. t. r. lima, d. foguel, i. polikarpov
Keywords: thyroxin, familial amyloid polyneurophaty, disease mutation, glycoprotein, hormone, polymorphism, polyneuropathy, retinol-binding, secreted, thyroid hormone, transport, vitamin a, transport protein
- 3cfn.pdb.
transport protein 04-mar-08 3cfn
Title: crystal structure of human transthyretin in complex with 1- anilino-8-naphthalene sulfonate
Author: l. -m. t. r. lima, d. foguel, i. polikarpov
Keywords: transport protein
- 3cfq.pdb.
transport protein 04-mar-08 3cfq
Cl
Title: crystal structure of human wild-type transthyretin in complex with diclofenac
Author: l. -m. t. r. lima, d. foguel, i. polikarpov
Keywords: thyroxin, familial amyloid polyneurophaty, disease mutation, glycoprotein, hormone, polymorphism, polyneuropathy, retinol-binding, secreted, thyroid hormone, transport, vitamin a, transport protein
- 3cft.pdb.
transport protein 04-mar-08 3cft
Title: crystal structure of human transthyretin in complex with 1- amino-5-naphthalene sulfonate
Author: l. -m. t. r. lima, d. foguel, i. polikarpov
Keywords: transport protein
- 3ct2.pdb.
isomerase 11-apr-08 3ct2
Mg
Title: crystal structure of muconate cycloisomerase from pseudomonas fluorescens
Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: target 9450f, mle, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, isomerase
- 3cv6.pdb.
oxidoreductase 17-apr-08 3cv6
Title: the crystal structure of mouse 17-alpha hydroxysteroid dehydrogenase gg225.226pp mutant in complex with inhibitor and cofactor nadp+.
Author: u. dhagat, o. el-kabbani
Keywords: hydroxysteroid dehydrogenase, ternary complex, hexestrol, cytoplasm, lipid metabolism, nadp, oxidoreductase, phosphoprotein, steroid metabolism
- 3cwz.pdb.
transport protein 23-apr-08 3cwz
Mg
Title: strucure of rab6(gtp)-r6ip1 complex
Author: r. recacha, a. houdusse, b. goud, a. r. khan
Keywords: er-golgi transport, gtp-binding, methylation, nucleotide- binding, phosphoprotein, prenylation, protein transport, transport, transport protein
- 3cxb.pdb.
signaling protein 24-apr-08 3cxb
Title: crystal structure of sifa and skip
Author: z. huang, j. chai
Keywords: skip, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein
- 3d2m.pdb.
transferase 08-may-08 3d2m
Title: crystal structure of n-acetylglutamate synthase from neisseria gonorrhoeae complexed with coenzyme a and l- glutamate
Author: d. shi, l. min, z. jin, n. m. allewell, m. tuchman
Keywords: transferase
- 3d2p.pdb.
transferase 08-may-08 3d2p
Title: crystal structure of n-acetylglutamate synthase from neisseria gonorrhoeae complexed with coenzyme a and l- arginine
Author: d. shi, l. min, z. jin, n. m. allewell, m. tuchman
Keywords: transferase
- 3d4i.pdb.
hydrolase 14-may-08 3d4i
Cl
Title: crystal structure of the 2h-phosphatase domain of sts-2
Author: y. chen, n. carpino, n. nassar
Keywords: 2h-phosphatase, ptp, sh3 domain, hydrolase
- 3d4k.pdb.
sugar binding protein 14-may-08 3d4k
Mn Ca
Title: concanavalin a complexed to a synthetic analog of the trimannoside
Author: r. kadirvelraj, b. l. foley, j. d. dyekjaer, r. j. woods
Keywords: conserved water, carbohydrate-protein binding, calcium, glycoprotein, lectin, manganese, metal- binding, sugar binding protein
- 3d6a.pdb.
hydrolase 19-may-08 3d6a
Mg W Na
Title: crystal structure of the 2h-phosphatase domain of sts-2 in complex with tungstate.
Author: y. chen, n. carpino, n. nassar
Keywords: pgm domain, tungstate, sh3 domain, hydrolase
- 3d6s.pdb.
hydrolase 20-may-08 3d6s
Title: crystal structure of mite allergen der f 1
Author: m. chruszcz, m. d. chapman, l. d. vailes, a. pomes, w. minor
Keywords: dust mites, allergen, glycoprotein, hydrolase, protease, secreted, thiol protease, zymogen
- 3d7m.pdb.
signaling protein 21-may-08 3d7m
Mg F Al
Title: crystal structure of the g protein fast-exchange double mutant i56c/q333c
Author: m. a. funk, a. m. preininger, w. m. oldham, s. m. meier, h. e. hamm, t. m. iverson
Keywords: allosteric, gtp-binding, lipoprotein, myristate, nucleotide-binding, palmitate, transducer, signaling protein
- 3d8w.pdb.
lyase 26-may-08 3d8w
Zn
Title: use of a carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti- cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: anti-cancer, benzolamide, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3d9z.pdb.
lyase 28-may-08 3d9z
Cl Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3daz.pdb.
lyase 30-may-08 3daz
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3db1.pdb.
hydrolase 30-may-08 3db1
Title: crystal structure of the 2h-phosphatase domain of sts-2 in complex with phosphate
Author: n. nassar, y. chen, n. carpino
Keywords: 2h-phosphatase, pgm domain, phosphate, sh3 domain, hydrolase
- 3dbu.pdb.
lyase 02-jun-08 3dbu
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dc3.pdb.
lyase 03-jun-08 3dc3
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dc9.pdb.
lyase 03-jun-08 3dc9
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dcc.pdb.
lyase 03-jun-08 3dcc
Cl Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dcs.pdb.
lyase 04-jun-08 3dcs
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dcw.pdb.
lyase 04-jun-08 3dcw
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dd0.pdb.
lyase 04-jun-08 3dd0
Zn
Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
- 3dds.pdb.
transferase 06-jun-08 3dds
Title: crystal structure of glycogen phosphorylase complexed with an anthranilimide based inhibitor gsk261
Author: r. t. nolte
Keywords: phosphoprotein, polymorphism, pyridoxal phosphate, transferase
- 3ddw.pdb.
transferase 06-jun-08 3ddw
Cl
Title: crystal structure of glycogen phosphorylase complexed with an anthranilimide based inhibitor gsk055
Author: r. t. nolte
Keywords: polymorphism, pyridoxal phosphate, transferase
- 3dg3.pdb.
isomerase 12-jun-08 3dg3
Mg
Title: crystal structure of muconate lactonizing enzyme from mucobacterium smegmatis
Author: a. a. fedorov, e. v. fedorov, a. sakai, j. a. gerlt, s. c. almo
Keywords: muconolactone binding, isomerase
- 3dg6.pdb.
isomerase 12-jun-08 3dg6
Mg
Title: crystal structure of muconate lactonizing enzyme from mucobacterium smegmatis complexed with muconolactone
Author: a. a. fedorov, e. v. fedorov, a. sakai, j. a. gerlt, s. c. almo
Keywords: muconolactone binding, isomerase
- 3dg7.pdb.
isomerase 12-jun-08 3dg7
Mg
Title: crystal structure of muconate lactonizing enzyme from mucobacterium smegmatis complexed with muconolactone
Author: a. a. fedorov, e. v. fedorov, a. sakai, j. a. gerlt, s. c. almo
Keywords: muconolactone binding, isomerase
- 3dgb.pdb.
isomerase 13-jun-08 3dgb
Mg
Title: crystal structure of muconate lactonizing enzyme from pseudomonas fluorescens complexed with muconolactone
Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo
Keywords: muconolactone binding, isomerase
- 3dng.pdb.
hydrolase 02-jul-08 3dng
Zn Ca
Title: crystal structure of the complex between mmp-8 and a non- zinc chelating inhibitor
Author: g. pochetti, r. montanari, f. mazza
Keywords: selective inhibition, non-zinc chelating inhibitors, calcium, collagen degradation, extracellular matrix, glycoprotein, metal-binding, metalloprotease, polymorphism, protease, secreted, zinc, zymogen
- 3doe.pdb.
signaling protein/hydrolase 04-jul-08 3doe
Mg
Title: complex of arl2 and bart, crystal form 1
Author: t. zhang, s. li, j. ding
Keywords: signaling protein/hydrolase complex
- 3dof.pdb.
signaling protein/hydrolase 04-jul-08 3dof
Mg
Title: complex of arl2 and bart, crystal form 2
Author: t. zhang, s. li, j. ding
Keywords: signaling protein/hydrolase complex
- 3dpe.pdb.
hydrolase 08-jul-08 3dpe
Zn Ca
Title: crystal structure of the complex between mmp-8 and a non- zinc chelating inhibitor
Author: g. pochetti, r. montanari, f. mazza
Keywords: selective inhibition, non-zinc chelating inhibitors, calcium, collagen degradation, extracellular matrix, glycoprotein, metal-binding, metalloprotease, polymorphism, protease, secreted, zinc, zymogen
- 3dpf.pdb.
hydrolase 08-jul-08 3dpf
Zn Ca
Title: crystal structure of the complex between mmp-8 and a non- zinc chelating inhibitor
Author: g. pochetti, r. montanari, f. mazza
Keywords: selective inhibition, non-zinc chelating inhibitors, calcium, collagen degradation, extracellular matrix, glycoprotein, metal-binding, metalloprotease, polymorphism, protease, secreted, zinc, zymogen
- 3du8.pdb.
transferase 17-jul-08 3du8
F
Title: crystal structure of gsk-3 beta in complex with nms-869553a
Author: r. t. bossi
Keywords: alternative splicing, atp-binding, nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase
- 3e0l.pdb.
hydrolase 31-jul-08 3e0l
Zn
Title: computationally designed ammelide deaminase
Author: p. m. murphy, j. m. bolduc, j. l. gallaher, b. l. stoddard, d. baker
Keywords: hydrolase, metal- binding, zinc
- 3e3b.pdb.
transferase 07-aug-08 3e3b
Title: crystal structure of catalytic subunit of human protein kinase ck2alpha prime with a potent indazole-derivative inhibitor
Author: t. kinoshita, t. nakaniwa, t. tada
Keywords: wnt signaling pathway
- 3e85.pdb.
plant protein 19-aug-08 3e85
Na
Title: crystal structure of pathogenesis-related protein llpr- 10.2b from yellow lupine in complex with diphenylurea
Author: h. c. fernandes, g. bujacz, a. bujacz, m. m. sikorski, m. jaskolski
Keywords: cytokinin, diphenylurea, plant pr-10 protein, yellow lupine, pathogenesis-related protein, plant defense, plant protein
- 3edd.pdb.
hydrolase 03-sep-08 3edd
Ca
Title: structural base for cyclodextrin hydrolysis
Author: s. buedenbender, g. e. schulz
Keywords: hydrolase, glycosidase
- 3ede.pdb.
hydrolase 03-sep-08 3ede
Ca
Title: structural base for cyclodextrin hydrolysis
Author: s. buedenbender, g. e. schulz
Keywords: hydrolase, glycosidase
- 3edf.pdb.
hydrolase 03-sep-08 3edf
Ca
Title: structural base for cyclodextrin hydrolysis
Author: s. buedenbender, g. e. schulz
Keywords: glycosidase, hydrolase
- 3edj.pdb.
hydrolase 03-sep-08 3edj
Ca
Title: structural base for cyclodextrin hydrolysis
Author: s. buedenbender, g. e. schulz
Keywords: glycosidase, hydrolase
- 3edk.pdb.
hydrolase 03-sep-08 3edk
Ca
Title: structural base for cyclodextrin hydrolysis
Author: s. buedenbender, g. e. schulz
Keywords: glycosidase, hydrolase
- 3emp.pdb.
oxidoreductase 24-sep-08 3emp
Title: crystal structure of the s-acetanilide modified form of c165s ahpc
Author: p. a. karplus, a. hall
Keywords: ahpc, peroxiredoxin, antioxidant, peroxidase, redox-active center
- 3end.pdb.
oxidoreductase 25-sep-08 3end
Mg Fe
Title: crystal structure of the l protein of rhodobacter sphaeroides light-independent protochlorophyllide reductase (bchl) with mgadp bound: a homologue of the nitrogenase fe protein
Author: r. sarma, b. m. barney, t. l. hamilton, a. jones, l. c. seefeldt, j. w. peters
Keywords: metal-binding, nucleotide- binding, oxidoreductase, photosynthesis
- 3enm.pdb.
transferase 25-sep-08 3enm
Se
Title: the structure of the map2k mek6 reveals an autoinhibitory dimer
Author: x. min, r. akella, h. he, j. m. humphreys, s. tsutakawa, s. -j. lee, j. a. tainer, m. h. cobb, e. j. goldsmith
Keywords: autoinhibited dimer, acetylation, alternative splicing, atp-binding, kinase, nucleotide-binding, phosphoprotein, serine/threonine-protein kinase, transferase, tyrosine-protein kinase
- 3eoy.pdb.
viral protein/cell adhesion 29-sep-08 3eoy
Title: structure of reovirus sigma1 in complex with its receptor junctional adhesion molecule-a
Author: e. kirchner, k. m. guglielmi, t. s. dermody, t. stehle
Keywords: virus receptor complex, beta-barrel, beta- spiral repeat, greek key motif, trimer, immunoglobulin superfamily, viral protein/cell adhesion complex
- 3eq1.pdb.
transferase 30-sep-08 3eq1
Title: the crystal structure of human porphobilinogen deaminase at 2.8a resolution
Author: s. e. kolstoe, r. gill, f. mohammed, s. p. wood
Keywords: alternative splicing, cytoplasm, disease mutation, heme biosynthesis, porphyrin biosynthesis, transferase
- 3esx.pdb.
electron transport 06-oct-08 3esx
Cl Ca
Title: e16ke61kd126kd150k flavodoxin from anabaena
Author: b. herguedas, j. a. hermoso, m. martinez-julvez, g. goni, m. medina
Keywords: electron transport, flavoprotein, fmn, transport
- 3esy.pdb.
electron transport 06-oct-08 3esy
Title: e16ke61k flavodoxin from anabaena
Author: b. herguedas, m. martinez-julvez, j. a. hermoso, g. goni, m. medina
Keywords: electron transport, flavoprotein, fmn, transport
- 3esz.pdb.
electron transport 06-oct-08 3esz
Mg
Title: k2ak3a flavodoxin from anabaena
Author: b. herguedas, m. martinez-julvez, j. hermoso, g. goni, m. medina
Keywords: electron transport, flavoprotein, fmn, transport
- 3eva.pdb.
transferase 13-oct-08 3eva
Title: crystal structure of yellow fever virus methyltransferase complexed with s-adenosyl-l-homocysteine
Author: a. a. thompson, b. j. geiss, o. b. peersen
Keywords: secreted, serine protease, transmembrane, viral nucleoprotein, virion
- 3evb.pdb.
transferase 13-oct-08 3evb
Title: crystal structure of yellow fever virus methyltransferase complexed with s-adenosyl-l-homocysteine
Author: a. a. thompson, b. j. geiss, o. b. peersen
Keywords: secreted, serine protease, transmembrane, viral nucleoprotein, virion
- 3evc.pdb.
transferase 13-oct-08 3evc
Title: crystal structure of gtp complex of yellow fever virus methyltransferase and s-adenosyl-l-homocysteine
Author: a. a. thompson, b. j. geiss, o. b. peersen
Keywords: secreted, serine protease, transmembrane, viral nucleoprotein, virion
- 3evd.pdb.
transferase 13-oct-08 3evd
Title: crystal structure of gtp complex of yellow fever virus methyltransferase and s-adenosyl-l-homocysteine
Author: a. a. thompson, b. j. geiss, o. b. peersen
Keywords: secreted, serine protease, transmembrane, viral nucleoprotein, virion
- 3eve.pdb.
transferase 13-oct-08 3eve
Title: crystal structure of gpppa complex of yellow fever virus methyltransferase and s-adenosyl-l-homocysteine
Author: a. a. thompson
Keywords: secreted, serine protease, transmembrane, viral nucleoprotein, virion
- 3evf.pdb.
transferase 13-oct-08 3evf
Title: crystal structure of me7-gpppa complex of yellow fever virus methyltransferase and s-adenosyl-l-homocysteine
Author: a. a. thompson, b. j. geiss, o. b. peersen
Keywords: secreted, serine protease, transmembrane, viral nucleoprotein, virion
- 3evg.pdb.
transferase 13-oct-08 3evg
Title: crystal structure of dengue-2 virus methyltransferase complexed with s-adenosyl-l-homocysteine
Author: a. a. thompson, b. j. geiss, o. b. peersen
Keywords: rna- directed rna polymerase, secreted, serine protease, transcription, transcription regulation, transmembrane, viral nucleoprotein, virion
- 3evi.pdb.
unknown function 13-oct-08 3evi
Na
Title: crystal structure of the thioredoxin-fold domain of human phosducin-like protein 2
Author: x. lou, r. bao, c. zhou, y. chen
Keywords: 3-layer(aba) sandwich, unknown function
- 3exk.pdb.
transferase 16-oct-08 3exk
Title: human dck r104m/d133a in complex with l-dt and adp
Author: s. hazra, a. lavie
Keywords: p-loop, l-dt, thymidine kinase activity, atp-binding, kinase, nucleotide-binding, nucleus, phosphoprotein, transferase
- 3f2q.pdb.
rna 30-oct-08 3f2q
Mg K
Title: crystal structure of the fmn riboswitch bound to fmn
Author: a. a. serganov, l. huang
Keywords: transcription, rna
- 3f2t.pdb.
rna 30-oct-08 3f2t
Mg K Ir
Title: crystal structure of the fmn riboswitch bound to fmn, iridium hexamine soak.
Author: a. a. serganov, l. huang
Keywords: transcription, rna
- 3f2w.pdb.
rna 30-oct-08 3f2w
Mg Ba
Title: crystal structure of the fmn riboswitch bound to fmn, ba2+ soak.
Author: a. a. serganov, l. huang
Keywords: riboswitch, transcription, barium, rna
- 3f2x.pdb.
rna 30-oct-08 3f2x
Mg Cs
Title: crystal structure of the fmn riboswitch bound to fmn, cs+ soak.
Author: a. a. serganov, l. huang
Keywords: riboswitch, transcription, cesium, rna
- 3f2y.pdb.
rna 30-oct-08 3f2y
Mg Mn K
Title: crystal structure of the fmn riboswitch bound to fmn, mn2+ soak.
Author: a. a. serganov, l. huang
Keywords: riboswitch, transcription, manganese, rna
- 3f30.pdb.
rna 30-oct-08 3f30
Co Mg K
Title: crystal structure of the fmn riboswitch bound to fmn, cobalt hexammine soak.
Author: a. a. serganov, l. huang
Keywords: riboswitch, transcription, cobalt hexamine, rna
- 3f3t.pdb.
transferase 31-oct-08 3f3t
Title: kinase domain of csrc in complex with inhibitor rl38 (type iii)
Author: c. gruetter, s. klueter, m. getlik, d. rauh
Keywords: type iii, dfg-out, alternative splicing, atp- binding, kinase, lipoprotein, myristate, nucleotide-binding, phosphoprotein, proto-oncogene, sh2 domain, sh3 domain, transferase, tyrosine-protein kinase
- 3f3u.pdb.
transferase 31-oct-08 3f3u
Title: kinase domain of csrc in complex with inhibitor rl37 (type iii)
Author: c. gruetter, s. klueter, m. getlik, d. rauh
Keywords: type iii, dfg-out, alternative splicing, atp- binding, kinase, lipoprotein, myristate, nucleotide-binding, phosphoprotein, proto-oncogene, sh2 domain, sh3 domain, transferase, tyrosine-protein kinase
- 3f4e.pdb.
rna 31-oct-08 3f4e
Mg K
Title: crystal structure of the fmn riboswitch bound to fmn, split rna.
Author: a. a. serganov, l. huang
Keywords: riboswitch, transcription, rna
- 3f4g.pdb.
rna 31-oct-08 3f4g
Mg K
Title: crystal structure of the fmn riboswitch bound to riboflavin.
Author: a. a. serganov, l. huang
Keywords: fmn, riboswitch, transcription, rna
- 3f4h.pdb.
rna 31-oct-08 3f4h
Mg K
Title: crystal structure of the fmn riboswitch bound to roseoflavin
Author: a. a. serganov, l. huang
Keywords: fmn, riboswitch, transcription, rna
- 3f8t.pdb.
hydrolase 13-nov-08 3f8t
Title: crystal structure analysis of a full-length mcm homolog from methanopyrus kandleri
Author: b. bae, s. k. nair
Keywords: helicase, mcm homolog, dna replication, atp-binding, dna-binding, nucleotide-binding, hydrolase
- 3fa3.pdb.
lyase 14-nov-08 3fa3
F Mn
Title: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate lyase superfamily member, trigonal crystal form
Author: b. c. narayanan, o. herzberg
Keywords: helix swapping, lyase
- 3fa4.pdb.
lyase 14-nov-08 3fa4
Mg
Title: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate lyase superfamily member, triclinic crystal form
Author: b. c. narayanan, o. herzberg
Keywords: helix swapping, lyase
- 3fbv.pdb.
transferase, hydrolase 19-nov-08 3fbv
Title: crystal structure of the oligomer formed by the kinase- ribonuclease domain of ire1
Author: a. v. korennykh, p. f. egea, a. a. korostelev, j. finer-moore, c. zhang, k. m. shokat, r. m. stroud, p. walter
Keywords: multifunctional enzyme, nucleotide- binding, phosphoprotein, serine/threonine-protein kinase, transcription, transcription regulation, transferase, transmembrane, unfolded protein response
- 3fbx.pdb.
hydrolase 20-nov-08 3fbx
Na Xe
Title: crystal structure of the lysosomal 66.3 kda protein from mouse solved by s-sad
Author: k. lakomek, a. dickmanns, u. mueller, r. ficner
Keywords: glycosylated, disulphide bonds, oxidized cysteine, alternative splicing, glycoprotein, hydrolase, lipid degradation, lysosome
- 3fc6.pdb.
transcription 21-nov-08 3fc6
Cl F
Title: hrxralpha & mlxralpha with an indole pharmacophore, sb786875
Author: d. g. washburn, t. h. hoang, n. campobasso, a. smallwood, d. j. parks, c. l. webb, k. frank, m. nord, c. duraiswami, c. evans, m. jaye, s. k. thompson
Keywords: zinc, zinc-finger
- 3fh6.pdb.
transport protein 08-dec-08 3fh6
Title: crystal structure of the resting state maltose transporter from e. coli
Author: d. khare, m. l. oldham, c. orelle, a. l. davidson, j. chen
Keywords: ground state, abc transporter, membrane protein, cell inner membrane, cell membrane, membrane, sugar transport, transmembrane, transport, atp- binding, hydrolase, nucleotide-binding, transport protei...
- 3fhc.pdb.
transport protein/hydrolase 09-dec-08 3fhc
Title: crystal structure of human dbp5 in complex with nup214
Author: h. von moeller, e. conti
Keywords: rna-binding, transport protein/hydrolase complex
- 3fht.pdb.
hydrolase/rna 10-dec-08 3fht
Mg
Title: crystal structure of human dbp5 in complex with amppnp and rna
Author: h. von moeller, e. conti
Keywords: membrane, mrna transport, nuclear pore complex, nucleotide-binding, nucleus, phosphoprotein, protein transport, rna-binding, translocation, transport, hydrolase/rna complex
- 3fi2.pdb.
transferase 10-dec-08 3fi2
Title: crystal structure of jnk3 with amino-pyrazole inhibitor, sr- 3451
Author: j. e. habel
Keywords: protein-inhibitor complex, alternative splicing, atp- binding, chromosomal rearrangement, cytoplasm, epilepsy, kinase, nucleotide-binding, phosphoprotein, serine/threonine-protein kinase, transferase
- 3fi3.pdb.
transferase 10-dec-08 3fi3
F
Title: crystal structure of jnk3 with indazole inhibitor, sr-3737
Author: j. e. habel, d. duckett, p. lograsso
Keywords: protein-inhibitor complex, alternative splicing, atp- binding, chromosomal rearrangement, cytoplasm, epilepsy, kinase, nucleotide-binding, phosphoprotein, serine/threonine-protein kinase, transferase
- 3fic.pdb.
ribosome 11-dec-08 3fic
(electron microscopy)
Title: t. thermophilus 70s ribosome in complex with mrna, trnas and ef-tu.gdp.kirromycin ternary complex, fitted to a 6.4 a cryo-em map. this file contains the 30s subunit and the ligands
Author: j. -c. schuette, c. m. t. spahn
Keywords: phosphoprotein, protein biosynthesis
- 3fih.pdb.
ribosome 11-dec-08 3fih
(electron microscopy)
Title: ternary complex-bound e.coli 70s ribosome. this entry consists of the 30s subunit, trnas and the ternary complex.
Author: e. villa, j. sengupta, l. g. trabuco, j. lebarron, w. t. baxter, t. r. shaikh, r. a. grassucci, p. nissen, m. ehrenberg, k. schulten, j. frank
Keywords: gtp-binding, membrane, nucleotide-binding, phosphoprotein, protein biosynthesis
- 3fik.pdb.
ribosome 12-dec-08 3fik
(electron microscopy)
Title: ternary complex-bound e.coli 70s ribosome. this entry consists of the 50s subunit.
Author: e. villa, j. sengupta, l. g. trabuco, j. lebarron, w. t. baxter, t. r. shaikh, r. a. grassucci, p. nissen, m. ehrenberg, k. schulten, j. frank
Keywords: transcription regulation, transcription termination, translation regulation, trna-binding, phosphoprotein
- 3fin.pdb.
ribosome 12-dec-08 3fin
(electron microscopy)
Title: t. thermophilus 70s ribosome in complex with mrna, trnas and ef-tu.gdp.kirromycin ternary complex, fitted to a 6.4 a cryo-em map. this file contains the 50s subunit.
Author: j. -c. schuette, c. m. t. spahn
Keywords: ribosomal protein, metal-binding, rna- binding, rrna-binding, zinc, trna-binding, repressor, translation regulation, methylation, ribosome
- 3fiu.pdb.
ligase 12-dec-08 3fiu
Mg Na
Title: structure of nmn synthetase from francisella tularensis
Author: l. sorci, d. martynowski, y. eyobo, a. l. osterman, h. zhang
Keywords: adenine nucleotide alpha hydrolase-like, atp- binding, ligase, nad, nucleotide-binding
- 3fj5.pdb.
transferase 14-dec-08 3fj5
Title: crystal structure of the c-src-sh3 domain
Author: a. camara-artigas
Keywords: transferase, alternative splicing, atp- binding, kinase, lipoprotein, myristate, nucleotide-binding, phosphoprotein, proto-oncogene, sh2 domain, sh3 domain, tyrosine-protein kinase
- 3fks.pdb.
hydrolase 17-dec-08 3fks
Title: yeast f1 atpase in the absence of bound nucleotides
Author: v. kabaleeswaran, j. symersky, h. shen, j. e. walker, a. g. w. leslie, d. m. mueller
Keywords: transport, hydrolase
- 3fn8.pdb.
lyase 23-dec-08 3fn8
Hg
Title: crystal structure of merb complexed with mercury
Author: c. momany, a. summers, c. cagle, j. teske
Keywords: lyase, mercuric resistance, mercury, plasmid
- 3fqn.pdb.
immune system 07-jan-09 3fqn
Mg Cd
Title: phosphorylation of self-peptides alters human leukocyte antigen class i-restricted antigen presentation and generates tumor specific epitopes
Author: j. petersen, j. rossjohn
Keywords: secreted, cancer, tcr, self-epitope
- 3fqr.pdb.
immune system 07-jan-09 3fqr
Mg Cd
Title: phosphorylation of self-peptides alters human leukocyte antigen class i-restricted antigen presentation and generates tumor specific epitopes
Author: j. petersen, j. rossjohn
Keywords: secreted, cancer, tcr, self-epitope
- 3fqt.pdb.
immune system 07-jan-09 3fqt
Mg Cd
Title: phosphorylation of self-peptides alters human leukocyte antigen class i-restricted antigen presentation and generates tumor specific epitopes
Author: j. petersen, j. rossjohn
Keywords: secreted, cancer, tcr, self-epitope
- 3fqu.pdb.
immune system 07-jan-09 3fqu
Mg Cd
Title: phosphorylation of self-peptides alters human leukocyte antigen class i-restricted antigen presentation and generates tumor specific epitopes
Author: j. petersen, j. rossjohn
Keywords: secreted, cancer, tcr, self-epitope
- 3fqw.pdb.
immune system 07-jan-09 3fqw
Co Cd
Title: phosphorylation of self-peptides alters human leukocyte antigen class i-restricted antigen presentation and generates tumor specific epitopes
Author: j. petersen, j. rossjohn
Keywords: secreted, cancer, tcr, self-epitope
- 3fqx.pdb.
immune system 07-jan-09 3fqx
Mg Cd
Title: phosphorylation of self-peptides alters human leukocyte antigen class i-restricted antigen presentation and generates tumor specific epitopes
Author: j. petersen, j. rossjohn
Keywords: secreted, cancer, tcr, self-epitope
- 3frk.pdb.
transferase 08-jan-09 3frk
Title: x-ray structure of qdtb from t. thermosaccharolyticum in complex with a plp:tdp-3-aminoquinovose aldimine
Author: j. b. thoden, h. m. holden
Keywords: sugar-modification, natural porduct
- 3ftt.pdb.
transferase 13-jan-09 3ftt
Se
Title: crystal structure of the galactoside o-acetyltransferase from staphylococcus aureus
Author: a. a. knapik, i. a. shumilin, h. cui, x. xu, m. chruszcz, m. d. zimmerman, m. cymborowski, w. f. anderson, a. savchenko, w. minor, center for structural genomics of infectious diseases (csgid)
Keywords: enzyme, structural genomics, acyltransferase, transferase, center for structural genomics of infectious diseases, csgid
- 3fu2.pdb.
rna 13-jan-09 3fu2
Ca
Title: cocrystal structure of a class-i preq1 riboswitch
Author: d. j. klein, t. e. edwards, a. r. ferre-d'amare
- 3fu4.pdb.
rna 13-jan-09 3fu4
Ca
Title: cocrystal structure of a mutant class-i preq1 riboswitch
Author: d. j. klein, t. e. edwards, a. r. ferre-d'amare
- 3fw6.pdb.
hydrolase 17-jan-09 3fw6
Zn
Title: crystal structure of celm2, a bifunctional glucanase- xylanase protein from a metagenome library
Author: k. y. hwang, k. h. nam
Keywords: glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase
- 3fwf.pdb.
oxidoreductase 18-jan-09 3fwf
K Fe Se
Title: ferric camphor bound cytochrome p450cam containing a selenocysteine as the 5th heme ligand, monoclinic crystal form
Author: i. schlichting, k. von koenig, c. aldag, d. hilvert
Keywords: hemoprotein, cytochrome p450, cytochrome, heme, iron, metal-binding, monooxygenase, oxidoreductase
- 3fwg.pdb.
oxidoreductase 18-jan-09 3fwg
K Fe
Title: ferric camphor bound cytochrome p450cam, arg365leu, glu366gln, monoclinic crystal form
Author: i. schlichting, k. von koenig, c. aldag, d. hilvert
Keywords: cytochrome p450, cytochrome, heme, iron, metal- binding, monooxygenase, oxidoreductase
- 3fwi.pdb.
oxidoreductase 18-jan-09 3fwi
K Fe Se
Title: ferric camphor bound cytochrome p450cam containing a selenocysteine as the 5th heme ligand, tetragonal crystal form
Author: i. schlichting, k. von koenig, c. aldag, d. hilvert
Keywords: cytochrome p450, selenocysteine, cytochrome, heme, iron, metal-binding, monooxygenase, oxidoreductase
- 3fwj.pdb.
oxidoreductase 18-jan-09 3fwj
K Fe Se
Title: ferric camphor bound cytochrome p450cam containing a selenocysteine as the 5th heme ligand, orthorombic crystal form
Author: i. schlichting, k. von koenig, c. aldag, d. hilvert
Keywords: cytochrome p450, selenocysteine, cytochrome, heme, iron, metal-binding, monooxygenase, oxidoreductase
- 3fxi.pdb.
immune system 21-jan-09 3fxi
Mg
Title: crystal structure of the human tlr4-human md-2-e.coli lps ra complex
Author: b. s. park, d. h. song, h. m. kim, j. -o. lee
Keywords: alternative splicing, glycoprotein, immune response, inflammatory response, innate immunity, membrane, polymorphism, receptor, transmembrane, secreted, immune system
- 3fxt.pdb.
gene regulation 21-jan-09 3fxt
Title: crystal structure of the n-terminal domain of human nudt6
Author: l. tresaugues, m. welin, c. h. arrowsmith, h. berglund, c. bountra, r. collins, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, t. karlberg, t. kotenyova, l. lehtio, m. moche, m. e. nilsson, t. nyman, c. persson, j. sagemark, h. schueler, m. i. siponen, a. g. thorsell, s. van den berg, j. weigelt, m. wikstrom, p. nordlund, structural genomics consortium (sgc)
Keywords: nudt6, gfg, fgf2as, antisense basic fibroblast growth factor, fgf-2 regulation, alternative splicing, hydrolase, polymorphism, ubl conjugation, gene regulation, structural genomics consortium, sgc
- 3fy0.pdb.
transferase 21-jan-09 3fy0
Ru
Title: crystal structure of pak1 kinase domain with ruthenium complex dw1
Author: j. maksimoska, r. marmorstein, e. meggers
Keywords: kinase, atp-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction, cytoplasm, nucleotide-binding, phosphoprotein, polymorphism, serine/threonine-protein kinase
- 3g1p.pdb.
lyase 30-jan-09 3g1p
Mn Zn
Title: crystals structure of phnp from e.coli k-12
Author: k. podzelinska, z. jia
Keywords: c-p lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake
- 3g2a.pdb.
dna 31-jan-09 3g2a
Title: crystal structure of d(cacgcg).d(cgcgtg) grown in presence of 1mm mncl2
Author: s. venkadesh, p. k. mandal, r. kannan, n. gautham
- 3g2g.pdb.
transferase 31-jan-09 3g2g
Title: s437y mutant of human muscle pyruvate kinase, isoform m2
Author: b. hong, s. dimov, a. allali-hassani, w. tempel, f. mackenzie, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, m. vedadi, h. park, structural genomics consortium (sgc)
Keywords: single nucleotide polymorphism, snp, mutation, acetylation, allosteric enzyme, alternative splicing, glycolysis, kinase, magnesium, metal- binding, phosphoprotein, polymorphism, pyruvate, transferase
- 3g2r.pdb.
dna 01-feb-09 3g2r
Mn
Title: crystal structure of d(cacgcg).d(cgcgtg) cocrystallized with mncl2
Author: s. venkadesh, p. k. mandal, r. kannan, n. gautham
- 3g3d.pdb.
lyase 02-feb-09 3g3d
F
Title: crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-azido-ump
Author: y. liu, h. l. tang, a. bello, e. poduch, l. kotra, e. pai
Keywords: phosphoprotein, polymorphism, pyrimidine biosynthesis, transferase
- 3g3m.pdb.
lyase 02-feb-09 3g3m
F
Title: crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-iodo-ump
Author: y. liu, h. l. tang, a. m. bello, e. poduch, l. p. kotra, e. f. pai
Keywords: phosphoprotein, polymorphism, pyrimidine biosynthesis, transferase
- 3g43.pdb.
metal binding protein 03-feb-09 3g43
Ca
Title: crystal structure of the calmodulin-bound cav1.2 c-terminal regulatory domain dimer
Author: j. l. fallon, f. a. quiocho
Keywords: glycoprotein, ion transport, ionic channel, membrane, transmembrane, transport, voltage-gated channel, metal binding protein
- 3g48.pdb.
protein transport 03-feb-09 3g48
Title: crystal structure of chaperone csaa form bacillus anthracis str. ames
Author: b. nocek, m. zhou, j. stam, w. anderson, a. joachimiak, center for structural genomics of infectious diseases, center for structural genomics of infectious diseases (csgid)
Keywords: csaa, structural genomics, niaid structural genomic centers for infectious diseases, center for structural genomics of infectious diseases, protein transport, csgid
- 3g56.pdb.
dna binding protein 04-feb-09 3g56
Title: structure of the macrolide biosensor protein, mphr(a)
Author: j. zheng, v. sagar, a. smolinsky, c. bourke, n. laronde-leblanc, t. a. cropp
Keywords: repressor, biosensor, erythromycin, streptomyces, natural products, biosynthesis, dna-binding, plasmid, transcription, transcription regulation, dna binding protein
- 3g5t.pdb.
transferase 05-feb-09 3g5t
Hg Se
Title: crystal structure of trans-aconitate 3-methyltransferase from yeast
Author: e. s. burgie, c. a. bingman, g. e. wesenberg, g. n. phillips jr. , center for eukaryotic structural genomics (cesg)
Keywords: structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg, cytoplasm, phosphoprotein, s-adenosyl-l-methionine, transferase
- 3g64.pdb.
lyase 06-feb-09 3g64
Zn Se
Title: crystal structure of putative enoyl-coa hydratase from streptomyces coelicolor a3(2)
Author: y. kim, x. xu, h. cui, a. savchenko, a. m. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, lyase
- 3g6n.pdb.
hydrolase 07-feb-09 3g6n
Na Fe
Title: crystal structure of an efpdf complex with met-ala-ser
Author: k. y. hwang, k. h. nam
Keywords: peptide deformylase, hydrolase
- 3g73.pdb.
transcription/dna 09-feb-09 3g73
Mg
Title: structure of the foxm1 dna binding
Author: d. r. littler, a. perrakis, r. g. hibbert, r. h. medema
Keywords: transcription
- 3g74.pdb.
structural genomics, unknown function 09-feb-09 3g74
Se
Title: crystal structure of a functionally unknown protein from eubacterium ventriosum atcc 27560
Author: k. tan, a. sather, n. marshall, l. freeman, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: eubacterium ventriosum atcc 27560, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3g7p.pdb.
structural genomics, unknown function 10-feb-09 3g7p
Se
Title: crystal structure of nifx-associated protein of unknown function (yp_002425942.1) from acidithiobacillus ferrooxidans atcc 23270 at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: nifx-associated protein of unknown function, duf269, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
- 3g7q.pdb.
transferase 10-feb-09 3g7q
Cl Se
Title: crystal structure of valine-pyruvate aminotransferase avta (np_462565.1) from salmonella typhimurium lt2 at 1.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: valine-pyruvate aminotransferase avta, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, aminotransferase, pyruvate, transferase
- 3g7s.pdb.
ligase 10-feb-09 3g7s
Se
Title: crystal structure of a long-chain-fatty-acid-coa ligase (fadd1) from archaeoglobus fulgidus
Author: k. palani, d. kumaran, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: ligase, protein structure initiative, psi-ii, nysgxrc, 11193j, structural genomics, new york structural genomix research consortium, new york sgx research center for structural genomics
- 3g8c.pdb.
ligase 12-feb-09 3g8c
Mg
Title: crystal stucture of biotin carboxylase in complex with biotin, bicarbonate, adp and mg ion
Author: c. y. chou, l. p. yu, l. tong
Keywords: carboxylase, biotin-dependent, fatty acid synthesis, substrates bound, atp-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, nucleotide- binding
- 3g8d.pdb.
ligase 12-feb-09 3g8d
Mg
Title: crystal structure of the biotin carboxylase subunit, e296a mutant, of acetyl-coa carboxylase from escherichia coli
Author: c. y. chou, l. p. yu, l. tong
Keywords: carboxylase, biotin-dependent, fatty acid synthesis, active site mutant, atp-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, nucleotide- binding
- 3g8w.pdb.
transferase 12-feb-09 3g8w
Se
Title: crystal structure of a probable acetyltransferase from staphylococcus epidermidis atcc 12228
Author: k. tan, a. sather, n. marshall, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: acetyltransferase, staphylococcus epidermidis atcc 12228, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 3g94.pdb.
toxin, hydrolase 12-feb-09 3g94
Zn
Title: further refinement of botulinum neurotoxin type b catalytic domain with synaptobrevin-ii bound
Author: m. a. hanson, r. c. stevens
Keywords: botulinum neurotoxin, synaptobrevin, snare, hydrolase, membrane, metal-binding, metalloprotease, neurotoxin, protease, secreted, toxin, transmembrane, zinc
- 3g9q.pdb.
transport protein 13-feb-09 3g9q
Se
Title: crystal structure of the fhud fold-family bsu3320, a periplasmic binding protein component of a fep/fec-like ferrichrome abc transporter from bacillus subtilis. northeast structural genomics consortium target sr577a
Author: f. forouhar, h. neely, j. seetharaman, h. janjua, l. mao, r. xiao, c. ciccosanti, e. l. foote, d. lee, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: transport, transport protein
- 3g9t.pdb.
hydrolase 14-feb-09 3g9t
Title: crystal structure of este5, was soaked by p-nitrophenyl butyrate for 5sec
Author: k. y. hwang, k. h. nam
Keywords: este5, esterase, lipase, hydrolase
- 3g9u.pdb.
hydrolase 14-feb-09 3g9u
Title: crystal structure of este5, was soaked by p-nitrophenyl butyrate for 5min
Author: k. y. hwang, k. h. nam
Keywords: este5, esterase, lipase, hydrolase
- 3g9y.pdb.
transcription/rna 15-feb-09 3g9y
Zn
Title: crystal structure of the second zinc finger from zranb2/znf265 bound to 6 nt ssrna sequence agguaa
Author: f. e. loughlin, a. p. mcgrath, m. lee, j. m. guss, j. p. mackay
Keywords: zranb2, znf265, rna, protein-rna complex, , transcription/rna complex
- 3g9z.pdb.
hydrolase 16-feb-09 3g9z
Title: crystal structure of este5, was soaked by p-nitrophenyl caprylate
Author: k. y. hwang, k. h. nam
Keywords: este5, esterase, lipase, hydrolase
- 3gan.pdb.
structural genomics, unknown function 17-feb-09 3gan
Cl Se
Title: crystal structure of gene product from arabidopsis thaliana at3g22680 with bound suramin
Author: e. s. burgie, c. a. bingman, g. e. wesenberg, g. n. phillips jr. , center for eukaryotic structural genomics (cesg)
Keywords: structural genomics functional follow-up study, structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg, unknown function
- 3gaz.pdb.
oxidoreductase 18-feb-09 3gaz
Ca Se
Title: crystal structure of an alcohol dehydrogenase superfamily protein from novosphingobium aromaticivorans
Author: l. damodharan, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: new york structural genomix research consortium
- 3gb0.pdb.
hydrolase 18-feb-09 3gb0
Se
Title: crystal structure of aminopeptidase pept (np_980509.1) from bacillus cereus atcc 10987 at 2.04 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: aminopeptidase pept, peptidase family m20/m25/m40, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, aminopeptidase, hydrolase, metal-binding, zinc
- 3gbh.pdb.
structural genomics, unknown function 19-feb-09 3gbh
Ca Se
Title: crystal structure of putative nad(p)h:fmn oxidoreductase (np_765521.1) from staphylococcus epidermidis atcc 12228 at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative nad(p)h:fmn oxidoreductase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
- 3gbj.pdb.
motor protein 19-feb-09 3gbj
Mg
Title: crystal structure of the motor domain of kinesin kif13b bound with adp
Author: y. tong, l. shen, y. shen, w. tempel, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: motor domain, adp, structural genomics, structural genomics consortium, sgc, atp-binding, microtubule, motor protein, nucleotide-binding
- 3gca.pdb.
rna 21-feb-09 3gca
Title: the structural basis for recognition of the preq0 metabolite by an unusually small riboswitch aptamer domain
Author: r. c. spitale, j. e. wedekind
Keywords: preq0, riboswitch, rna, ribosomal binding site, amptamer, metabolite
- 3gcw.pdb.
protein binding 22-feb-09 3gcw
Ca
Title: pcsk9:egfa(h306y)
Author: h. j. kwon
Keywords: protein binding
- 3gcx.pdb.
protein binding 22-feb-09 3gcx
Ca
Title: pcsk9:egfa (ph 7.4)
Author: m. c. mcnutt, h. j. kwon, c. chen, j. r. chen, j. d. horton, t. a. lagace
Keywords: protein binding
- 3gd6.pdb.
isomerase, lyase 23-feb-09 3gd6
Title: crystal structure of divergent enolase from oceanobacillus iheyensis complexed with phosphate
Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: nysgxrc, target 9375a, divergent enolase, isomerase, lyase, psi-2, protein structure initiative, new york sgx research center for structural genomics
- 3ge4.pdb.
dna binding protein 25-feb-09 3ge4
Ca
Title: crystal structure of ferritin:dna-binding protein dps from brucella melitensis
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: ferritin, dna-binding protein, dps, burkholderia pseudomallei, structural genomics, seattle structural genomics center for infectious disease, dna binding protein
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