Recent PDB releases or updates: week of 22 August 2008
- 1f88.pdb.
signaling protein 29-jun-00 1f88
Hg Zn
Title: crystal structure of bovine rhodopsin
Author: t. okada, k. palczewski, r. e. stenkamp, m. miyano
Keywords: g protein-coupled receptor, membrane protein, retinal protein, visual pigment, signaling protein
- 2evu.pdb.
membrane protein 31-oct-05 2evu
Title: crystal structure of aquaporin aqpm at 2.3a resolution
Author: j. k. lee, d. kozono, j. remis, y. kitagawa, p. agre, r. m. stroud, center for structures of membrane proteins (csmp)
Keywords: membrane protein, structural genomics, psi-2, protein structure initiative, center for structures of membrane proteins, csmp
- 2f2b.pdb.
membrane protein 15-nov-05 2f2b
Title: crystal structure of integral membrane protein aquaporin aqpm at 1.68a resolution
Author: j. k. lee, d. kozono, j. remis, y. kitagawa, p. agre, r. m. stroud, center for structures of membrane proteins (csmp)
Keywords: integral membrane protein, channel, structural genomics, psi-2, protein structure initiative, center for structures of membrane proteins, csmp
- 2hlb.pdb.
signaling protein 06-jul-06 2hlb
Title: a structural basis for nucleotide exchange on g-alpha-i subunits and receptor coupling specificity
Author: c. a. johnston, d. p. siderovski, v. j. watts
Keywords: signaling protein
- 2jfw.pdb.
isomerase 06-feb-07 2jfw
Title: crystal structure of enterococcus faecium glutamate racemase in complex with tartrate
Author: t. lundqvist
Keywords: isomerase, glutamate racemase
- 2jjk.pdb.
hydrolase 09-apr-08 2jjk
Cl
Title: fructose-1,6-bisphosphatase(d-fructose-1,6-bisphosphate -1-phosphohydrolase) (e.c.3.1.3.11) complexed with a dual binding amp site inhibitor
Author: a. ruf, c. joseph, j. benz, b. fol, t. tetaz, p. hebeisen
Keywords: disease mutation, allosteric enzyme, zinc, hydrolase, polymorphism, gluconeogenesis, carbohydrate metabolism
- 2jjx.pdb.
transferase 23-apr-08 2jjx
Mg
Title: the crystal structure of ump kinase from bacillus anthracis (ba1797)
Author: c. meier, l. g. carter, e. j. mancini, r. j. owens, d. i. stuart, r. m. esnouf, oxford protein production facility (oppf), structural proteomics in europe (spine)
Keywords: structural proteomics in europe (spine)
- 2jk3.pdb.
transcription 11-aug-08 2jk3
Title: crystal structure of the hlyiir mutant protein with residues 169-186 substituted by gssgssg linker
Author: o. v. kovalevskiy, a. s. solonin, a. a. antson
Keywords: transcription regulation, dna-binding, tetr family, transcription, transcriptional regulator
- 2jnz.pdb.
allergen 15-feb-07 2jnz
He Hg
(NMR, 20 structures)
Title: solution structure of phl p 3, a major allergen from timothy grass pollen
Author: k. schweimer, i. matecko, p. roesch
Keywords: timothy grass pollen
- 2jrk.pdb.
allergen 27-jun-07 2jrk
He Hg
(NMR, 10 structures)
Title: nmr structure and epitope mapping of blo t 5
Author: s. chan, y. mok
Keywords: 3 helices bundle, dust mite allergen
- 2jss.pdb.
chaperone/nuclear protein 11-jul-07 2jss
He Hg
(NMR, 10 structures)
Title: nmr structure of chaperone chz1 complexed with histone h2a.z-h2b
Author: z. zhou, h. feng, d. f. hansen, h. kato, e. luk, d. i. freedberg, l. e. kay, c. wu, y. bai
Keywords: intrinsically unfolded protein, chaperone/structural protein complex, chaperone/nuclear protein complex
- 2jtf.pdb.
protein binding 30-jul-07 2jtf
He Hg
(NMR, 20 structures)
Title: solution structure of the phf20l1 mbt domain
Author: c. brockmann, a. n. iberg, k. rehbein, a. diehl, m. t. bedford, h. oschkinat
Keywords: mbt domain, solution nmr, protein binding
- 2jtt.pdb.
calcium binding protein/antitumor protei06-aug-07 2jtt
He Hg
(NMR, 20 structures)
Title: solution structure of calcium loaded s100a6 bound to c- terminal siah-1 interacting protein
Author: y. lee, w. j. chazin
Keywords: calcium binding protein/antitumor protein complex
- 2jtu.pdb.
toxin 06-aug-07 2jtu
Hg
(NMR, 20 structures)
Title: nmr structure of iota-rxia(38)
Author: d. wei, r. norton
Keywords: bromination, d-amino acid, hydroxylation, neurotoxin, secreted, toxin
- 2k4v.pdb.
structural genomics, unknown function 19-jun-08 2k4v
He Hg
(NMR, 20 structures)
Title: solution structure of uncharacterized protein pa1076 from pseudomonas aeruginosa. northeast structural genomics consortium (nesg) target pat3, ontario center for structural proteomics target pa1076 .
Author: a. gutmanas, a. lemak, c. fares, a. yee, a. semesi, c. h. arrowsmith, g. t. montelione, northeast structural genomics consortium (nesg), ontario centre for structural proteomics (ocsp)
Keywords: unknown function, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, ontario centre for structural proteomics, ocsp
- 2k4x.pdb.
ribosomal protein 20-jun-08 2k4x
He Hg Zn
(NMR, 20 structures)
Title: solution structure of 30s ribosomal protein s27a from thermoplasma acidophilum
Author: b. wu, a. yee, c. fares, a. lemak, a. semest, c. arrowsmith, g. t. montelione, northeast structural genomics consortium (nesg), ontario centre for structural proteomics (ocsp)
Keywords: ontario centre for structural proteomics, ocsp
- 2k53.pdb.
structural genomics, unknown function 24-jun-08 2k53
He Hg
(NMR, 20 structures)
Title: nmr solution structure of a3dk08 protein from clostridium thermocellum: northeast structural genomics consortium target cmr9
Author: g. v. t. swapna, w. huang, m. jiang, e. l. foote, r. xiao, r. nair, j. everett, t. b. acton, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: cmr9, clostridium thermocellum, a3dk08 protein, nmr, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, unknown function
- 2k54.pdb.
structural genomics, unknown function 24-jun-08 2k54
He Hg
(NMR, 20 structures)
Title: solution nmr structure of protein atu0742 from agrobacterium tumefaciens. northeast structural genomics consortium (nesg0) target att8. ontario center for structural proteomics target atc0727 .
Author: a. lemak, a. yee, a. gutmanas, c. fares, a. semesi, c. arrowsmith, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 2k5f.pdb.
metal transport 27-jun-08 2k5f
Hg
(NMR, 20 structures)
Title: solution nmr structure of feoa protein from chlorobium tepidum. northeast structural genomics consortium target ctr121
Author: a. eletsky, b. sathyamoorthy, j. l. mills, a. zeri, l. zhao, k. hamilton, e. l. foote, r. xiao, r. nair, m. c. baran, g. v. t. swapna, t. b. acton, b. rost, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
Keywords: alpha+beta, gft, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, metal transport
- 2k5h.pdb.
structural genomics, unknown function 27-jun-08 2k5h
He Hg
(NMR, 20 structures)
Title: solution nmr structure of protein encoded by mth693 from methanobacterium thermoautotrophicum: northeast structural genomics consortium target tt824a
Author: y. wu, k. singarapu, a. semesi, d. sukumaran, a. yee, m. garcia, c. arrowsmith, t. szyperski, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: nesg, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, unknown function
- 2k5n.pdb.
structural genomics, unknown function 30-jun-08 2k5n
Hg
(NMR, 20 structures)
Title: solution nmr structure of the n-terminal domain of protein eca1580 from erwinia carotovora, northeast structural genomics consortium target ewr156a
Author: j. l. mills, a. eletsky, q. zhang, d. lee, m. jiang, c. ciccosanti, r. xiao, j. lui, j. k. everett, g. swapna, t. b. acton, b. rost, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
Keywords: protein structure, psi, nesgc, ob fold, cold shock protein, structural genomics, protein structure initiative, northeast structural genomics consortium, unknown function
- 2k5v.pdb.
dna binding protein 30-jun-08 2k5v
He Hg
(NMR, 20 structures)
Title: solution nmr structure of the second ob-fold domain of replication protein a from methanococcus maripaludis. northeast structural genomics target mrr110b.
Author: j. m. aramini, m. maglaqui, m. jiang, c. ciccosanti, r. xiao, r. nair, j. k. everett, g. vt. swapna, t. b. acton, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: replication protein a, ob-fold domain, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, dna binding protein
- 2k6a.pdb.
structural protein 07-jul-08 2k6a
He Hg
(NMR, 20 structures)
Title: solution structure of eas d15 truncation mutant
Author: a. h. kwan
Keywords: eas, rodlets, assembly, amyloid, cell wall, cell wall biogenesis/degradation, secreted, structural protein
- 2k6d.pdb.
sh3 domain/ubiquitin 07-jul-08 2k6d
He Hg
(NMR, 8 structures)
Title: cin85 sh3-c domain in complex with ubiquitin
Author: j. forman-kay, i. bezsonova
Keywords: synapse, synaptosome, ubl conjugation, nucleus, sh3 domain/ubiquitin complex
- 2k75.pdb.
dna binding protein 01-aug-08 2k75
He Hg
(NMR, 20 structures)
Title: solution nmr structure of the ob domain of ta0387 from thermoplasma acidophilum. northeast structural genomics consortium target tar80b.
Author: t. a. ramelot, k. ding, d. lee, m. jiang, c. ciccosanti, r. xiao, r. nair, j. k. everett, g. swapna, t. b. acton, b. rost, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: ob fold, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function, dna binding protein
- 2k78.pdb.
heme-binding protein 06-aug-08 2k78
He Hg Zn
(NMR, 30 structures)
Title: solution structure of the isdc neat domain bound to zinc protoporphyrin
Author: v. a. villareal, r. m. pilpa, s. a. robson, e. a. fadeev, r. t. clubb
Keywords: nmr complex, heme, isd, isdc, cell wall, iron, metal-binding, peptidoglycan-anchor, secreted, transport protein, heme-binding protein
- 2o9d.pdb.
membrane protein 13-dec-06 2o9d
Title: crystal structure of aqpz mutant t183c.
Author: d. f. savage, r. m. stroud, center for structures of membrane proteins (csmp)
Keywords: integral membrane protein, structural genomics, psi-2, protein structure initiative, center for structures of membrane proteins, csmp
- 2o9e.pdb.
membrane protein 13-dec-06 2o9e
Hg
Title: crystal structure of aqpz mutant t183c complexed with mercury
Author: d. f. savage, r. m. stroud, center for structures of membrane proteins (csmp)
Keywords: integral membrane protein, structural genomics, psi-2, protein structure initiative, center for structures of membrane proteins, csmp
- 2o9f.pdb.
membrane protein 13-dec-06 2o9f
Title: crystal structure of aqpz mutant l170c
Author: d. f. savage, r. m. stroud, center for structures of membrane proteins (csmp)
Keywords: integral membrane protein, structural genomics, psi-2, protein structure initiative, center for structures of membrane proteins, csmp
- 2o9g.pdb.
membrane protein 13-dec-06 2o9g
Hg
Title: crystal structure of aqpz mutant l170c complexed with mercury.
Author: d. f. savage, r. m. stroud, center for structures of membrane proteins (csmp)
Keywords: integral membrane protein, structural genomics, psi-2, protein structure initiative, center for structures of membrane proteins, csmp
- 2pgf.pdb.
hydrolase 09-apr-07 2pgf
Zn Se
Title: crystal structure of adenosine deaminase from plasmodium vivax in complex with adenosine
Author: e. t. larson, e. a. merritt, structural genomics of pathogenic protozoa consortium (sgpp)
Keywords: structural genomics, medical structural genomics of pathogenic protozoa consortium, msgpp, structural genomics of pathogenic protozoa consortium, sgpp, psi, protein structure initiative
- 2pgr.pdb.
hydrolase 10-apr-07 2pgr
Zn Se
Title: crystal structure of adenosine deaminase from plasmodium vivax in complex with pentostatin
Author: e. t. larson, e. a. merritt, structural genomics of pathogenic protozoa consortium (sgpp)
Keywords: structural genomics, medical structural genomics of pathogenic protozoa consortium, msgpp, structural genomics of pathogenic protozoa consortium, sgpp, psi, protein structure initiative
- 2qpk.pdb.
oxidoreductase 24-jul-07 2qpk
I Fe Ca
Title: crystal structure of the complex of bovine lactoperoxidase with salicylhydroxamic acid at 2.34 a resolution
Author: a. k. singh, n. singh, s. sharma, p. kaur, t. p. singh
Keywords: complex, antibiotic, antimicrobial, calcium, cleavage on pair of basic residues, glycoprotein, heme, hydrogen peroxide, iron, metal-binding, oxidoreductase, peroxidase, secreted
- 2qtf.pdb.
nucleotide binding protein 02-aug-07 2qtf
Cd
Title: crystal structure of a gtp-binding protein from the hyperthermophilic archaeon sulfolobus solfataricus
Author: h. wu, l. sun, s. j. brouns, s. fu, z. rao, j. van der oost
Keywords: gtp-binding, nucleotide-binding, nucleotide binding protein
- 2qth.pdb.
nucleotide binding protein 02-aug-07 2qth
Mg Cd
Title: crystal structure of a gtp-binding protein from the hyperthermophilic archaeon sulfolobus solfataricus in complex with gdp
Author: h. wu, l. sun, s. j. brouns, s. fu, z. rao, j. van der oost
Keywords: gtp-binding, nucleotide-binding, nucleotide binding protein
- 2qv1.pdb.
hydrolase 07-aug-07 2qv1
Zn
Title: crystal structure of hcv ns3-4a v36m mutant
Author: y. wei
Keywords: protease, ns3-4a, v36m mutnat, crystal structure, hydrolase
- 2qvn.pdb.
hydrolase 08-aug-07 2qvn
Se
Title: crystal structure of adenosine deaminase from plasmodium vivax in complex with guanosine
Author: e. t. larson, e. a. merritt, structural genomics of pathogenic protozoa consortium (sgpp)
Keywords: tim barrel, structural genomics, medical structural genomics of pathogenic protozoa consortium, msgpp, plasmodium, malaria, psi, protein structure initiative
- 2qyh.pdb.
structural genomics, unknown function 15-aug-07 2qyh
Se
Title: crystal structure of the hypothetical protein (gk1056) from geobacillus kaustophilus hta426
Author: j. jeyakanthan, s. p. kanaujia, k. sekar, a. ebihara, a. shinkai, s. kuramitsu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: unknown function, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2qyi.pdb.
hydrolase/hydrolase inhibitor 15-aug-07 2qyi
Ni Ca
Title: crystal structure of a binary complex between an engineered trypsin inhibitor and bovine trypsin
Author: s. khamrui, j. dasgupta, j. k. dattagupta, u. sen
Keywords: hydrolase/hydrolase inhibitor complex
- 2r6k.pdb.
transferase 06-sep-07 2r6k
Title: crystal structure of an i71v hgsta1-1 mutant in complex with s-hexylglutathione
Author: h. w. dirr, l. fisher, j. p. w. g. burke, m. sayed, t. sewell
Keywords: s-hexyl- glutathione, x-ray crystal structure, cytoplasm, polymorphism
- 2r8t.pdb.
hydrolase 11-sep-07 2r8t
Title: crystal structure of the fructose 1,6-bisphosphatase glpx from e.coli in the complex with fructose 1,6-bisphosphate
Author: v. v. lunin, t. skarina, g. brown, a. yakunin, a. m. edwards, a. savchenko
Keywords: 1,6-bisphosphatase, carbohydrate metabolism, cytoplasm, hydrolase
- 2ra1.pdb.
sugar binding protein 14-sep-07 2ra1
Title: crystal structure of the n-terminal part of the bacterial s- layer protein sbsc
Author: t. pavkov, e. m. egelseer, m. tesarz, u. b. sleytr, w. keller
Keywords: s-layer protein, protein binding, sugar binding protein
- 2rc7.pdb.
membrane protein 19-sep-07 2rc7
Cl Br
Title: crystal structure of the nr3a ligand binding core complex with glycine at 1.58 angstrom resolution
Author: y. yao, m. l. mayer
Keywords: alternative splicing, calcium, cell junction, coiled coil, glycoprotein, ion transport, ionic channel, magnesium, postsynaptic cell membrane, receptor, synapse, transmembrane, transport
- 2rc8.pdb.
membrane protein 19-sep-07 2rc8
Cl
Title: crystal structure of the nr3a ligand binding core complex with d-serine at 1.45 angstrom resolution
Author: y. yao, m. l. mayer
Keywords: alternative splicing, calcium, cell junction, coiled coil, glycoprotein, ion transport, ionic channel, magnesium, postsynaptic cell membrane, receptor, synapse, transmembrane, transport
- 2rc9.pdb.
membrane protein 19-sep-07 2rc9
Title: crystal structure of the nr3a ligand binding core complex with acpc at 1.96 angstrom resolution
Author: y. yao, m. l. mayer
Keywords: alternative splicing, calcium, cell junction, coiled coil, glycoprotein, ion transport, ionic channel, magnesium, postsynaptic cell membrane, receptor, synapse, transmembrane, transport
- 2rca.pdb.
membrane protein 19-sep-07 2rca
Title: crystal structure of the nr3b ligand binding core complex with glycine at 1.58 angstrom resolution
Author: y. yao, m. l. mayer
Keywords: calcium, cell junction, coiled coil, glycoprotein, ion transport, ionic channel, magnesium, postsynaptic cell membrane, receptor, synapse, transmembrane, transport
- 2rcb.pdb.
membrane protein 19-sep-07 2rcb
Title: crystal structure of the nr3b ligand binding core complex with d-serine at 1.62 angstrom resolution
Author: y. yao, m. l. mayer
Keywords: calcium, cell junction, coiled coil, glycoprotein, ion transport, ionic channel, magnesium, postsynaptic cell membrane, receptor, synapse, transmembrane, transport
- 2rch.pdb.
lyase 20-sep-07 2rch
Fe
Title: crystal structure of arabidopsis thaliana allene oxide synthase (aos, cytochrome p450 74a, cyp74a) complexed with 13(s)-hod at 1.85 a resolution
Author: d. s. lee, p. nioche, c. s. raman
Keywords: chloroplast, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding, oxylipin biosynthesis, plastid, transit peptide
- 2rcl.pdb.
lyase 20-sep-07 2rcl
Fe
Title: crystal structure of arabidopsis thaliana allene oxide synthase (aos, cytochrome p450 74a, cyp74a) complexed with 12r,13s-vernolic acid at 2.4 a resolution
Author: d. s. lee, p. nioche, c. s. raman
Keywords: chloroplast, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding, oxylipin biosynthesis, plastid, transit peptide
- 2rcm.pdb.
lyase 20-sep-07 2rcm
Fe
Title: crystal structure of arabidopsis thaliana allene oxide synthase variant (f137l) (at-aos(f137l), cytochrome p450 74a) at 1.73 a resolution
Author: d. s. lee, p. nioche, c. s. raman
Keywords: chloroplast, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding, oxylipin biosynthesis, plastid, transit peptide
- 2rfv.pdb.
lyase 02-oct-07 2rfv
Cl
Title: high resolution structure of l-methionine gamma-lyase from citrobacter freundii
Author: a. d. nikulin, s. v. revtovich, e. a. morozova, n. a. nevskaya, s. v. nikonov, m. b. garber, t. v. demidkina
Keywords: plp-dependent enzyme, lyase
- 2rh4.pdb.
oxidoreductase 05-oct-07 2rh4
Title: actinorhodin ketoreductase, actkr, with nadph and inhibitor emodin
Author: t. p. korman, s. -c. tsai
Keywords: polyketide, actinorhodin, ketoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase
- 2rhc.pdb.
oxidoreductase 08-oct-07 2rhc
Title: actinorhodin ketordeuctase, actkr, with nadp+ and inhibitor emodin
Author: t. p. korman, s. -c. tsai
Keywords: polyketide, actinorhodin, ketoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase
- 2rhr.pdb.
oxidoreductase 09-oct-07 2rhr
Title: p94l actinorhodin ketordeuctase mutant, with nadph and inhibitor emodin
Author: t. p. korman, s. -c. tsai
Keywords: polyketide, actinorhodin, ketoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase
- 2rp3.pdb.
antiviral protein 30-apr-08 2rp3
He Hg
(NMR, 20 structures)
Title: solution structure of cyanovirin-n domain b mutant
Author: e. matei, w. furey, a. m. gronenborn
Keywords: hiv-inactivating, gp120, nmr, monomer, no 3d domain-swapping, antiviral protein
- 2v6q.pdb.
apoptosis 20-jul-07 2v6q
Br
Title: crystal structure of a bhrf-1 : bim bh3 complex
Author: m. kvansakul, d. c. s. huang, p. m. colman
Keywords: bcl-2, membrane, apoptosis, epstein-barr virus
- 2v7h.pdb.
immune system 30-jul-07 2v7h
Title: crystal structure of an immunogen specific anti- mannopyranoside monoclonal antibody fab fragment
Author: l. krishnan, g. sahni, k. j. kaur, d. m. salunke
Keywords: mannopyranoside specificity, molecular mimicry, immune system
- 2v7u.pdb.
transferase 02-aug-07 2v7u
Cl
Title: x-ray crystal structure of 5'-fluorodeoxyadenosine synthase s158g mutant complexed with s-adenosylmethionine and chloride ion
Author: x. zhu, d. o'hagan, j. h. naismith
Keywords: biosynthetic protein, transferase
- 2v7v.pdb.
transferase 02-aug-07 2v7v
F
Title: x-ray crystal structure of 5'-fluorodeoxyadenosine synthase from streptomyces cattleya complexed with 5'-fluorodeoxyadenosine
Author: x. zhu, d. o'hagan, j. h. naismith
Keywords: mechanism of fluorination, biosynthetic protein
- 2v7w.pdb.
transferase 02-aug-07 2v7w
F
Title: x-ray crystal structure of 5'-fluorodeoxyadenosine synthase s158g mutant complexed with 5'-fluorodeoxyadenosin
Author: x. zhu, d. o'hagan, j. h. naismith
Keywords: transferase, biosynthetic protein
- 2v8l.pdb.
hydrolase 09-aug-07 2v8l
Zn
Title: carbohydrate-binding of the starch binding domain of rhizopus oryzae glucoamylase in complex with beta- cyclodextrin and maltoheptaose
Author: j. -y. tung, y. -y. liu, y. -j. sun
Keywords: hydrolase, maltoheptaose, beta-cyclodextrin, carbohydrate binding, starch binding domain
- 2v8m.pdb.
hydrolase 09-aug-07 2v8m
Title: carbohydrate-binding of the starch binding domain of rhizopus oryzae glucoamylase in complex with beta- cyclodextrin and maltoheptaose
Author: j. -y. tung, y. -y. liu, y. -j. sun
Keywords: hydrolase, maltoheptaose, beta-cyclodextrin, carbohydrate binding, starch binding domain
- 2vle.pdb.
oxidoreductase 13-jan-08 2vle
Title: the structure of daidzin, a naturally occurring anti alcohol-addiction agent, in complex with human mitochondrial aldehyde dehydrogenase
Author: e. d. lowe, g. y. gao, l. n. johnson, w. m. keung
Keywords: aldehyde dehydrogenase, nad, daidzin, acetylation, polymorphism, mitochondrion, alcohol abuse, oxidoreductase
- 2vlf.pdb.
lyase 14-jan-08 2vlf
K
Title: quinonoid intermediate of citrobacter freundii tyrosine phenol-lyase formed with alanine
Author: d. milic, t. v. demidkina, d. matkovic-calogovic, a. a. antson
Keywords: quinonoid intermediate, lyase, pyridoxal phosphate, tyrosine degradation
- 2vlh.pdb.
lyase 14-jan-08 2vlh
K
Title: quinonoid intermediate of citrobacter freundii tyrosine phenol-lyase formed with methionine
Author: d. milic, t. v. demidkina, d. matkovic-calogovic, a. a. antson
Keywords: quinonoid intermediate, lyase, pyridoxal phosphate, tyrosine degradation
- 2vmk.pdb.
hydrolase 28-jan-08 2vmk
Zn
Title: crystal structure of e. coli rnase e apoprotein - catalytic domain
Author: d. j. koslover, a. j. callaghan, m. j. marcaida, m. martick, w. g. scott, b. f. luisi
Keywords: hydrolase, cytoplasm, rna-binding, rna turnover, endonuclease, rna processing
- 2vpa.pdb.
oxidoreductase 27-feb-08 2vpa
Title: high resolution crystal structure of the antibiotic resistance protein nima from deinococcus radiodurans
Author: h. -k. s. leiros, c. tedesco, s. m. mcsweeney
Keywords: atomic resolution, antibiotic resistance, deinococcus radiodurans, oxidoreductase
- 2vrg.pdb.
transport 04-apr-08 2vrg
He Hg Ca
(NMR, 20 structures)
Title: structure of human mcfd2
Author: j. e. guy, e. wigren, m. svard, t. hard, y. lindqvist
Keywords: glycoprotein sorting, disease mutation, secretory pathway, protein transport, er, ef-hand, calcium, transport, golgi apparatus, endoplasmic reticulum, coagulation factor deficiency
- 2vrr.pdb.
cell cycle/ligase 13-apr-08 2vrr
Na
Title: structure of sumo modified ubc9
Author: p. knipscheer, a. flotho, h. klug, j. v. olsen, w. j. van dijk, a. fish, e. s. johnson, m. mann, t. k. sixma, a. pichler
Keywords: developmental protein, host-virus interaction, cytoplasm, cell cycle, modification, cell division, cell cycle/ligase
- 2vrt.pdb.
hydrolase 14-apr-08 2vrt
Zn
Title: crystal structure of e. coli rnase e possessing m1 rna fragments - catalytic domain
Author: d. j. koslover, a. j. callaghan, m. j. marcaida, e. f. garman, m. martick, w. g. scott, b. f. luisi
Keywords: m1 rna, rnase p, nuclease, hydrolase, cytoplasm, rna-binding, rna turnover, endonuclease
- 2vs3.pdb.
transferase 18-apr-08 2vs3
Mn
Title: the binding of udp-galactose by an active site mutant of alpha-1,3 galactosyltransferase (alpha3gt)
Author: p. tumbale, h. jamaluddin, n. thiyagarajan, k. brew, k. r. acharya
Keywords: alpha-3gt
- 2vs4.pdb.
transferase 18-apr-08 2vs4
Mn
Title: the binding of udp-galactose by an active site mutant of alpha-1,3 galactosyltransferase (alpha3gt)
Author: p. tumbale, h. jamaluddin, n. thiyagarajan, k. brew, k. r. acharya
Keywords: alpha-3gt
- 2vs5.pdb.
transferase 18-apr-08 2vs5
Mn
Title: the binding of udp-galactose by an active site mutant of alpha-1,3 galactosyltransferase (alpha3gt)
Author: p. tumbale, h. jamaluddin, n. thiyagarajan, k. brew, k. r. acharya
Keywords: alpha-3gt
- 2vsd.pdb.
immune system receptor 22-apr-08 2vsd
Title: crystal structure of chir-ab1
Author: t. i. arnon, j. t. kaiser, p. j. bjorkman
Keywords: fc receptor
- 2vsr.pdb.
receptor 29-apr-08 2vsr
Title: hppargamma ligand binding domain in complex with 9-(s)-hode
Author: t. itoh, l. fairall, j. w. r. schwabe
Keywords: oxidised fatty acid, transcription factor, metal-binding, phosphoprotein, disease mutation
- 2vst.pdb.
receptor 29-apr-08 2vst
Title: hppargamma ligand binding domain in complex with 13-(s)- hode
Author: t. itoh, l. fairall, j. w. r. schwabe
Keywords: oxidised fatty acid, transcription factor, metal-binding, phosphoprotein, disease mutation
- 2vt5.pdb.
hydrolase 09-may-08 2vt5
Title: fructose-1,6-bisphosphatase(d-fructose-1,6-bisphosphate -1-phosphohydrolase) (e.c.3.1.3.11) complexed with a dual binding amp site inhibitor
Author: a. ruf, c. joseph, j. benz, b. fol, t. tetaz
Keywords: disease mutation, allosteric enzyme, zinc, hydrolase, polymorphism, gluconeogenesis, carbohydrate metabolism
- 2vuj.pdb.
hydrolase 26-may-08 2vuj
Title: environmentally isolated gh11 xylanase
Author: c. dumon, a. varvak, m. a. wall, j. e. flint, r. j. lewis, j. h. lakey, p. luginbuhl, s. healey, t. todaro, g. desantis, m. sun, l. parra-gessert, x. tan, d. p. weiner, h. j. gilbert
Keywords: xylanase, hydrolase, glycosidase
- 2vul.pdb.
hydrolase 27-may-08 2vul
Title: thermostable mutant of environmentally isolated gh11 xylanase
Author: c. dumon, a. varvak, m. a. wall, j. e. flint, r. j. lewis, j. h. lakey, p. luginbuhl, s. healey, t. todaro, g. desantis, m. sun, l. parra-gessert, x. tan, d. p. weiner, h. j. gilbert
Keywords: xylanase, hydrolase, glycosidase
- 2vuv.pdb.
sugar-binding protein 30-may-08 2vuv
Ca
Title: crystal structure of codakine at 1.3a resolution
Author: j. p. gourdine, g. c. cioci, l. miguet, c. unverzagt, a. varrot, c. gauthier, e. j. smith-ravin, a. imberty
Keywords: c-type, lectin, mannose, codakine, invertebrate
- 2vuz.pdb.
sugar-binding protein 02-jun-08 2vuz
Ca
Title: crystal structure of codakine in complex with biantennary nonasaccharide at 1.7a resolution
Author: j. p. gourdine, g. c. cioci, l. miguet, c. unverzagt, a. varrot, c. gauthier, e. j. smith-ravin, a. imberty
Keywords: codakia orbicularis, sugar-binding protein, c-type, lectin, codakine, biantennary, invertebrate
- 2vv0.pdb.
receptor 02-jun-08 2vv0
Title: hppargamma ligand binding domain in complex with dha
Author: t. itoh, l. fairall, j. w. r. schwabe
Keywords: oxidised fatty acid, transcription factor, metal-binding, phosphoprotein, disease mutation
- 2vv1.pdb.
receptor 02-jun-08 2vv1
Title: hppargamma ligand binding domain in complex with 4-hdha
Author: t. itoh, l. fairall, j. w. r. schwabe
Keywords: oxidised fatty acid, transcription factor, metal-binding, phosphoprotein, disease mutation
- 2vv2.pdb.
receptor 02-jun-08 2vv2
Title: hppargamma ligand binding domain in complex with 5-hepa
Author: t. itoh, l. fairall, j. w. r. schwabe
Keywords: oxidised fatty acid, transcription factor, metal-binding, phosphoprotein, disease mutation
- 2vv3.pdb.
receptor 02-jun-08 2vv3
Title: hppargamma ligand binding domain in complex with 4-oxodha
Author: t. itoh, l. fairall, j. w. r. schwabe
Keywords: oxidised fatty acid, transcription factor, metal-binding, phosphoprotein, disease mutation
- 2vv4.pdb.
receptor 02-jun-08 2vv4
Title: hppargamma ligand binding domain in complex with 6-oxoote
Author: t. itoh, l. fairall, j. w. r. schwabe
Keywords: nuclear receptor, ligand binding domain, oxidised fatty acid, transcription factor
- 2vwb.pdb.
hydrolase 20-jun-08 2vwb
Title: structure of the archaeal kae1-bud32 fusion protein mj1130: a model for the eukaryotic ekc-keops subcomplex involved in transcription and telomere homeostasis.
Author: a. hecker, r. lopreiato, m. graille, b. collinet, p. forterre, d. libri, h. van tilbeurgh
Keywords: ekc, zinc, kae1, bud32, keops, mj1130, protease, telomere, metal-binding, metalloprotease
- 2z7e.pdb.
biosynthetic protein 20-aug-07 2z7e
Fe
Title: crystal structure of aquifex aeolicus iscu with bound [2fe- 2s] cluster
Author: y. shimomura, k. wada, y. takahashi, k. fukuyama
Keywords: iron, biosynthesis, [2fe-2s], isc, iscu, nifu, asymmetric trimer, three conserved cys, biosynthetic protein
- 2zbj.pdb.
sugar binding protein 22-oct-07 2zbj
Mn Ca
Title: crystal structure of dioclea rostrata lectin
Author: t. m. de oliveira, p. delatorre, b. a. m. da rocha, e. p. de sousa, k. s. nascimento, g. a. bezerra, t. r. moura, r. g. benevides, e. h. s. bezerra, f. b. m. b. moreno, v. n. freire, w. f. de azevedo jr. , b. s. cavada
Keywords: lectin, diocleinae, dioclea rostrata, calcium, manganese, metal-binding, vacuole, sugar binding protein
- 2zdo.pdb.
oxidoreductase 27-nov-07 2zdo
Fe
Title: crystal structure of isdg-n7a in complex with hemin
Author: w. c. lee, m. l. reniere, e. p. skaar, m. e. p. murphy
Keywords: protein-substrate complex, cytoplasm, heme, iron, metal-binding, monooxygenase, oxidoreductase
- 2zdp.pdb.
oxidoreductase 27-nov-07 2zdp
Cl Co
Title: crystal structure of isdi in complex with cobalt protoporphyrin ix
Author: w. c. lee, m. l. reniere, e. p. skaar, m. e. p. murphy
Keywords: beta-barrel, cobalt protoporphyrin ix, cytoplasm, heme, iron, metal-binding, monooxygenase, oxidoreductase
- 2zeq.pdb.
ligase 14-dec-07 2zeq
Title: crystal structure of ubiquitin-like domain of murine parkin
Author: k. tomoo
Keywords: synapse, ubl conjugation, ubl conjugation pathway, zinc, zinc-finger
- 2zib.pdb.
antifreeze protein 14-feb-08 2zib
Title: crystal structure analysis of calcium-independent type ii antifreeze protein
Author: y. nishimiya, r. sato, h. kondo, n. noro, h. sugimoto, m. suzuki, s. tsuda
Keywords: thermal hysteresis, lectin
- 2zlf.pdb.
oxidoreductase 09-apr-08 2zlf
Title: the structural basis for peptidomimetic inhibition of eukaryotic ribonucleotide reductase
Author: h. xu, j. w. fairman, s. r. wijerathna, j. lamacchia, n. r. kreischer, e. helmbrecht, b. s. cooperman, c. dealwis
Keywords: allosteric enzyme, atp-binding, cytoplasm, dna replication, nucleotide-binding, oxidoreductase, phosphoprotein
- 2zlg.pdb.
oxidoreductase 09-apr-08 2zlg
Title: the structual basis for peptidomimetic inhibition of eukaryotic ribonucleotide reductase
Author: h. xu, j. w. fairman, s. r. wijerathna, j. lamacchia, n. r. kreischer, e. helmbrecht, b. s. cooperman, c. dealwis
Keywords: allosteric enzyme, atp-binding, cytoplasm, dna replication, nucleotide-binding, oxidoreductase, phosphoprotein
- 2znm.pdb.
oxidoreductase 30-apr-08 2znm
Se
Title: oxidoreductase nmdsba3 from neisseria meningitidis
Author: j. p. vivian, j. scoullar, a. l. robertson, s. p. bottomley, j. horne, y. chin, t. velkov, j. wielens, p. e. thompson, s. piek, e. byres, t. beddoe, m. c. j. wilce, c. kahler, j. rossjohn, m. j. scanlon
Keywords: dsba-like, oxidoreductase
- 2zpo.pdb.
hydrolase 25-jul-08 2zpo
Title: crystal structure of green turtle egg white ribonuclease
Author: s. katekaew, y. kakuta, t. torikata, m. kimura, k. yoneda, t. araki
Keywords: endonuclease, hydrolase, nuclease
- 3b9g.pdb.
hydrolase 05-nov-07 3b9g
Na Ca
Title: crystal structure of loop deletion mutant of trypanosoma vivax nucleoside hydrolase (3gtvnh) in complex with immh
Author: a. vandemeulebroucke, s. de vos, e. van holsbeke, j. steyaert, w. versees
Keywords: flexible loop deletion, transition state complex, hydrolase
- 3bn3.pdb.
cell adhesion, immune system 13-dec-07 3bn3
Mg
Title: crystal structure of icam-5 in complex with al i domain
Author: h. zhang, t. a. springer, j. -h. wang
Keywords: i domain, integrin, allosteric mobility, cell adhesion, immune system, alternative splicing
- 3bqm.pdb.
cell adhesion 20-dec-07 3bqm
F
Title: lfa-1 i domain bound to inhibitors
Author: l. f. silvian
Keywords: leukocyte function associated antigen-1, alternative splicing, calcium, cell adhesion, glycoprotein, integrin, magnesium, membrane, polymorphism, receptor, transmembrane
- 3bqn.pdb.
cell adhesion 20-dec-07 3bqn
F
Title: lfa-1 i domain bound to inhibitors
Author: l. f. silvian
Keywords: leukocyte function associated antigen-1, alternative splicing, calcium, cell adhesion, glycoprotein, magnesium, membrane, polymorphism, receptor, transmembrane
- 3bs5.pdb.
signaling protein/membrane protein 22-dec-07 3bs5
Se
Title: crystal structure of hcnk2-sam/dhyp-sam complex
Author: t. rajakulendran, d. f. ceccarelli, i. kurinov, f. sicheri
Keywords: signaling protein/membrane protein complex
- 3bs7.pdb.
signaling protein 22-dec-07 3bs7
Title: crystal structure of the sterile alpha motif (sam) domain of hyphen/aveugle
Author: t. rajakulendran, f. sicheri
Keywords: cytoplasm, membrane, sensory transduction, vision, signaling protein
- 3btp.pdb.
dna binding protein, chaperone 30-dec-07 3btp
Title: crystal structure of agrobacterium tumefaciens vire2 in complex with its chaperone vire1: a novel fold and implications for dna binding
Author: o. dym, s. albeck, t. unger, m. elbaum, israel structural proteomics center (ispc)
Keywords: unique topology, novel fold, structural genomics, israel structural proteomics center, ispc, crown gall tumor, dna-binding, plasmid, secreted, virulence, dna binding protein, chaperone
- 3bxe.pdb.
gene regulation 13-jan-08 3bxe
Title: crystal structure of effector binding domain of central glycolytic gene regulator (cggr) from bacillus subtilis in complex with dihydroxyacetone phosphate
Author: p. rezacova, z. otwinowski
Keywords: catabolic repressor, transcriptional regulator, deor family, dna-binding, transcription regulation, gene regulation
- 3bxf.pdb.
gene regulation 13-jan-08 3bxf
Cl
Title: crystal structure of effector binding domain of central glycolytic gene regulator (cggr) from bacillus subtilis in complex with effector fructose-1,6-bisphosphate
Author: p. rezacova, z. otwinowski
Keywords: catabolic repressor, transcriptional regulator, deor family, dna-binding, transcription regulation, gene regulation
- 3bxg.pdb.
gene regulation 13-jan-08 3bxg
Title: crystal structure of effector binding domain of central glycolytic gene regulator (cggr) from bacillus subtilis in complex with glucose-6-phosphate
Author: p. rezacova, z. otwinowski
Keywords: catabolic repressor, transcriptional regulator, deor family, dna-binding, transcription regulation, gene regulation
- 3bxh.pdb.
gene regulation 13-jan-08 3bxh
Title: crystal structure of effector binding domain of central glycolytic gene regulator (cggr) from bacillus subtilis in complex with fructose-6-phosphate
Author: p. rezacova, z. otwinowski
Keywords: catabolic repressor, transcriptional regulator, deor family, dna-binding, transcription regulation, gene regulation
- 3c2s.pdb.
protein binding 25-jan-08 3c2s
Zn
Title: structural characterization of a human fc fragment engineered for lack of effector functions
Author: v. oganesyan, h. wu, w. f. dall'acqua
Keywords: mutant, effector function, receptor, protein binding
- 3c9x.pdb.
hydrolase 19-feb-08 3c9x
Title: crystal structure of trichoderma reesei aspartic proteinase
Author: a. s. nascimento, s. krauchenco, a. m. golubev, a. gustchina, a. wlodawer, i. polikarpov
Keywords: aspartyl protease, hydrolase, protease
- 3c9y.pdb.
hydrolase 19-feb-08 3c9y
Title: crystal structure of trichoderma reesei aspartic proteinase complexed with pepstatin a
Author: a. s. nascimento, s. krauchenco, a. m. golubev, a. gustchina, a. wlodawer, i. polikarpov
Keywords: trichoderma reesei, pepstatin a, aspartyl protease, hydrolase, protease
- 3cav.pdb.
oxidoreductase 20-feb-08 3cav
Title: crystal structure of 5beta-reductase (akr1d1) in complex with nadp+ and 5beta-pregnan-3,20-dione
Author: f faucher, l cantin, r breton
Keywords: steroid metabolism
- 3cb9.pdb.
luminescent protein 21-feb-08 3cb9
Mg
Title: development of a family of redox-sensitive green fluorescent protein indicators for use in relatively oxidizing subcellular environments
Author: j. r. lohman
Keywords: redox, luminescent protein
- 3cbe.pdb.
luminescent protein 21-feb-08 3cbe
Mg
Title: development of a family of redox-sensitive green fluorescent protein indicators for use in relatively oxidizing subcellular environments
Author: j. r. lohman
Keywords: redox, luminescent protein
- 3cd1.pdb.
luminescent protein 26-feb-08 3cd1
Title: development of a family of redox-sensitive green fluorescent protein indicators for use in relatively oxidizing subcellular environments
Author: j. r. lohman
Keywords: redox, luminescent protein
- 3cd9.pdb.
luminescent protein 26-feb-08 3cd9
Title: development of a family of redox-sensitive green fluorescent protein indicators for use in relatively oxidizing subcellular environments
Author: j. r. lohman
Keywords: redox, luminescent protein
- 3cfd.pdb.
immune system 03-mar-08 3cfd
Title: purple-fluorescent antibody ep2-25c10 in complex with its stilbene hapten
Author: e. w. debler, a. heine, i. a. wilson
Keywords: purple-fluorescent antibody, hapten complex, immune system
- 3cfe.pdb.
immune system 03-mar-08 3cfe
Title: crystal structure of purple-fluorescent antibody ep2-25c10
Author: e. w. debler, a. heine, i. a. wilson
Keywords: purple-fluorescent antibody, hapten complex, immune system
- 3chw.pdb.
structural protein 10-mar-08 3chw
Ca
Title: complex of dictyostelium discoideum actin with profilin and the last poly-pro of human vasp
Author: k. baek, r. dominguez
Keywords: actin-binding, cell junction, cell projection, coiled coil, membrane, sh3- binding
- 3ci5.pdb.
structural protein 10-mar-08 3ci5
Mg Ca
Title: complex of phosphorylated dictyostelium discoideum actin with gelsolin
Author: k. baek, r. dominguez
Keywords: actin capping, actin- binding, alternative initiation, amyloid, calcium, disease mutation, polymorphism, secreted
- 3cip.pdb.
structural protein 11-mar-08 3cip
Mg Ca
Title: complex of dictyostelium discoideum actin with gelsolin
Author: k. baek, r. dominguez
Keywords: actin-binding, alternative initiation, amyloid, calcium, disease mutation, polymorphism, secreted
- 3clc.pdb.
transcription regulator/dna 18-mar-08 3clc
Mg
Title: crystal structure of the restriction-modification controller protein c.esp1396i tetramer in complex with its natural 35 base-pair operator
Author: j. e. mcgeehan, s. d. streeter, s. j. thresh, n. ball, r. b. ravelli, g. g. kneale
Keywords: transcriptional regulator, helix-turn- helix, dna-bending, plasmid, transcription regulator/dna complex
- 3cli.pdb.
lyase 19-mar-08 3cli
Fe
Title: crystal structure of arabidopsis thaliana allene oxide synthase (aos, cytochrome p450 74a, cyp74a) at 1.80 a resolution
Author: d. -s. lee, p. nioche, c. s. raman
Keywords: lyase
- 3cvm.pdb.
blood clotting 18-apr-08 3cvm
He Hg
Title: high resolution structure of a stable plasminogen activator inhibitor type-1 in its protease cleaved form
Author: j. k. jensen, p. g. w. gettins
Keywords: cleaved serpin, glycoprotein, plasminogen activation, polymorphism, protease inhibitor, secreted, serine protease inhibitor, blood clotting
- 3czz.pdb.
antiviral protein 30-apr-08 3czz
Title: crystal structure of cyanovirin-n domain b mutant
Author: e. matei, w. furey, a. m. gronenborn
Keywords: sugar binding protein, hiv-inactivating, gp120, antiviral protein, protein synthesis inhibitor
- 3d11.pdb.
hydrolase 02-may-08 3d11
I
Title: crystal structures of the nipah g attachment glycoprotein
Author: k. xu, k. r. rajashankar, y-p. chan, p. himanen, c. c. broder, d. b. nikolov
Keywords: envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-anchor, transmembrane, virion
- 3d12.pdb.
hydrolase/membrane protein 02-may-08 3d12
Title: crystal structures of nipah virus g attachment glycoprotein in complex with its receptor ephrin-b3
Author: k. xu, k. r. rajashankar, y. -p. chan, p. himanen, c. c. broder, d. b. nikolov
Keywords: hydrolase/membrane protein complex
- 3d27.pdb.
hydrolase 07-may-08 3d27
Mn
Title: e. coli methionine aminopeptidase with fe inhibitor w29
Author: q. z. ye, s. chai, h. z. he
Keywords: manganese, iron, hydrolase, peptidase, enzyme- inhibitor complex, metalloenzyme, aminopeptidase, cobalt, metal-binding, protease
- 3d2r.pdb.
transferase 08-may-08 3d2r
Mg
Title: crystal structure of pyruvate dehydrogenase kinase isoform 4 in complex with adp
Author: m. kato, r. m. wynn, l. c. chuang, s. -c. tso, j. li, d. t. chuang
Keywords: homodimer, ghkl superfamily, kinase, carbohydrate metabolism, glucose metabolism, mitochondrion, phosphoprotein, polymorphism, transferase, transit peptide
- 3d32.pdb.
transport protein 09-may-08 3d32
Cl Na
Title: complex of gaba(a) receptor-associated protein (gabarap) with a synthetic peptide
Author: o. h. weiergraeber, t. stangler, d. willbold
Keywords: beta-grasp fold, cytoplasm, cytoskeleton, golgi apparatus, membrane, microtubule, transport, transport protein
- 3d4q.pdb.
transferase 14-may-08 3d4q
Title: pyrazole-based inhibitors of b-raf kinase
Author: t. morales, g. p. a vigers, b. j brandhuber
Keywords: transferase, zinc, zinc- finger
- 3d4u.pdb.
hydrolase/hydrolase inhibitor 15-may-08 3d4u
Zn
Title: bovine thrombin-activatable fibrinolysis inhibitor (tafia) in complex with tick-derived carboxypeptidase inhibitor.
Author: l. sanglas, z. valnickova, j. l. arolas, i. pallares, t. guevara, m. sola, t. kristensen, j. j. enghild, f. x. aviles, f. x. gomis-ruth
Keywords: hydrolase/hydrolase inhibitor complex
- 3d9i.pdb.
transcription 27-may-08 3d9i
Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
Author: r. becker, b. loll, a. meinhart
Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
- 3d9j.pdb.
transcription 27-may-08 3d9j
Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
Author: r. becker, b. loll, a. meinhart
Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
- 3d9k.pdb.
transcription 27-may-08 3d9k
Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
Author: r. becker, b. loll, a. meinhart
Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
- 3d9l.pdb.
transcription 27-may-08 3d9l
Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
Author: r. becker, b. loll, a. meinhart
Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
- 3d9m.pdb.
transcription 27-may-08 3d9m
Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
Author: r. becker, b. loll, a. meinhart
Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
- 3d9n.pdb.
transcription 27-may-08 3d9n
Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
Author: r. becker, b. loll, a. meinhart
Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
- 3d9o.pdb.
transcription 27-may-08 3d9o
Se
Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
Author: r. becker, b. loll, a. meinhart
Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
- 3d9p.pdb.
transcription 27-may-08 3d9p
Title: snapshots of the rna processing factor scaf8 bound to different phosphorylated forms of the carboxy-terminal domain of rna-polymerase ii
Author: r. becker, b. loll, a. meinhart
Keywords: rna polymerase ii ctd interacting domain, arm repeats, phospho-ctd, phosphoprotein, rna-binding, transcription
- 3db6.pdb.
transferase 30-may-08 3db6
F
Title: crystal structure of an activated (thr->asp) polo-like kinase 1 (plk1) catalytic domain in complex with compound 902
Author: r. a. elling, r. v. fucini, j. zhu, k. j. barr, m. j. romanowski
Keywords: plk1, catalytic domain, small-molecule inhibitor, kinase, transferase
- 3dbb.pdb.
transcription regulator 31-may-08 3dbb
Title: crystal structure of l3mbtl2
Author: y. guo, c. qi, a. allali-hassani, p. pan, h. zhu, a. dong, f. mackenzie, l. crombet, p. loppnau, i. kozieradzki, m. vedadi, a. m. edwards, j. weigelt, c. bountra, c. h. arrowsmith, a. bochkarev, r. read, j. min, structural genomics consortium (sgc)
Keywords: transcription regulator, phosphoprotein
- 3dc2.pdb.
oxidoreductase 03-jun-08 3dc2
Title: crystal structure of serine bound d-3-phosphoglycerate dehydrogenase from mycobacterium tuberculosis
Author: s. dey, j. c. sacchettini
Keywords: phosphoglycerate dehydrogenase, serine biosynthesis, amino-acid biosynthesis, nad
- 3dca.pdb.
structural genomics, unknown function 03-jun-08 3dca
Se
Title: crystal structure of the rpa0582- protein of unknown function from rhodopseudomonas palustris- a structural genomics target
Author: p. sledz, s. wang, m. chruszcz, v. yim, m. kudritska, e. evdokimova, d. turk, a. savchenko, a. edwards, a. joachimiak, w. minor, midwest center for structural genomics (mcsg)
Keywords: structural genomics, sad, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3dck.pdb.
hydrolase 03-jun-08 3dck
Title: x-ray structure of d25n chemical analogue of hiv-1 protease complexed with ketomethylene isostere inhibitor
Author: v. y. torbeev, k. mandal, v. a. terechko, s. b. h. kent
Keywords: homodimer, beta-turns, beta-strand, hydrolase
- 3dcr.pdb.
hydrolase 04-jun-08 3dcr
Title: x-ray structure of hiv-1 protease and hydrated form of ketomethylene isostere inhibitor
Author: v. y. torbeev, k. mandal, v. a. terechko, s. b. h. kent
Keywords: homodimer, beta-turn, beta-strand, hydrolase
- 3dcv.pdb.
transferase 04-jun-08 3dcv
Title: crystal structure of human pim1 kinase complexed with 4-(4- hydroxy-3-methyl-phenyl)-6-phenylpyrimidin-2(1h)-one
Author: c. r. bellamacina, c. m. shafer, m. lindvall, t. g. gesner, a. yabannavar, j. weiping, l. song, a. walter
Keywords: serine/threonine-protein kinase, transferase
- 3ddn.pdb.
oxidoreductase 05-jun-08 3ddn
Title: crystal structure of hydroxypyruvic acid phosphate bound d- 3-phosphoglycerate dehydrogenase in mycobacterium tuberculosis
Author: s. dey, j. c. sacchettini
Keywords: phosphoglycerate dehydrogenase, serine biosynthesis, amino-acid biosynthesis, nad
- 3ddu.pdb.
hydrolase 06-jun-08 3ddu
Cl F
Title: prolyl oligopeptidase with gsk552
Author: k. p. madauss, r. a. reid, c. d. haffner, a. b. miller
Keywords: prolyl oligopeptidase, endopeptidase, hydrolase
- 3deg.pdb.
ribosome 10-jun-08 3deg
(cryo-electron microscopy)
Title: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-gmppnp
Author: s. r. connell, m. topf, y. qin, d. n. wilson, t. mielke, p. fucini, k. h. nierhaus, c. m. t. spahn
Keywords: translation, lepa, ef4, gtp-binding, membrane, nucleotide-binding, periplasm, antibiotic resistance, ribonucleoprotein, ribosomal protein, rna-binding, rrna- binding, trna-binding, methylation
- 3df1.pdb.
ribosome 11-jun-08 3df1
Mg
Title: crystal structure of the bacterial ribosome from escherichia coli in complex with hygromycin b. this file contains the 30s subunit of the first 70s ribosome, with hygromycin b bound. the entire crystal structure contains two 70s ribosomes.
Author: m. a. borovinskaya, s. shoji, k. fredrick, j. h. d. cate
Keywords: ribosome
- 3df2.pdb.
ribosome 11-jun-08 3df2
Mg Zn
Title: crystal structure of the bacterial ribosome from escherichia coli in complex with hygromycin b. this file contains the 50s subunit of the first 70s ribosome. the entire crystal structure contains two 70s ribosomes.
Author: m. a. borovinskaya, s. shoji, k. fredrick, j. h. d. cate
Keywords: ribosome
- 3df3.pdb.
ribosome 11-jun-08 3df3
Mg
Title: crystal structure of the bacterial ribosome from escherichia coli in complex with hygromycin b. this file contains the 30s subunit of the second 70s ribosome, with hygromycin b bound. the entire crystal structure contains two 70s ribosomes.
Author: m. a. borovinskaya, s. shoji, k. fredrick, j. h. d. cate
Keywords: ribosome
- 3df4.pdb.
ribosome 11-jun-08 3df4
Mg Zn
Title: crystal structure of the bacterial ribosome from escherichia coli in complex with hygromycin b. this file contains the 50s subunit of the second 70s ribosome. the entire crystal structure contains two 70s ribosomes.
Author: m. a. borovinskaya, s. shoji, k. fredrick, j. h. d. cate
Keywords: ribosome
- 3dgp.pdb.
transcription 14-jun-08 3dgp
Title: crystal structure of the complex between tfb5 and the c- terminal domain of tfb2
Author: d. e. kainov, j. cavarelli, j. m. egly, a. poterszman
Keywords: beta-alpha-beta spilt, heterodimer, dna damage, dna excision, dna repair, nucleus, transcription, transcription regulation
- 3dh4.pdb.
transport protein 16-jun-08 3dh4
Er Na
Title: crystal structure of sodium/sugar symporter with bound galactose from vibrio parahaemolyticus
Author: j. abramson, s. faham, d. cascio
Keywords: symporter, sugar transport, sglt, ion transport, membrane, sodium, sodium transport, symport, transmembrane, transport, transport protein
- 3di5.pdb.
structural genomics, unknown function 19-jun-08 3di5
Ni Se
Title: crystal structure of a dinb-like protein (np_980948.1) from bacillus cereus atcc 10987 at 2.01 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: a dinb-like protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, dinb family, unknown function
- 3di6.pdb.
transferase 19-jun-08 3di6
Cl F
Title: hiv-1 rt with pyridazinone non-nucleoside inhibitor
Author: s. f. harris, a. villasenor, p. dunten
Keywords: rt, reverse transcriptase, transferase rna-directed dna polymerase, nucleotidyltransferase, aids, cytoplasm, hydrolase, transferase, viral nucleoprotein
- 3djb.pdb.
hydrolase 23-jun-08 3djb
Mg Se
Title: crystal structure of a hd-superfamily hydrolase (bt9727_1981) from bacillus thuringiensis, northeast structural genomics consortium target bur114
Author: f. forouhar, m. su, j. seetharaman, s. m. vorobiev, h. janjua, y. fang, r. xiao, k. cunningham, m. maglaqui, l. a. owen, d. wang, m. c. baran, j. liu, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, hydrolase
- 3dka.pdb.
structural genomics, unknown function 24-jun-08 3dka
Cl Se
Title: crystal structure of a dinb-like protein (np_389123.1) from bacillus subtilis at 2.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: a dinb-like protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, phosphoprotein, dinb family, unknown function
- 3dkm.pdb.
ligase 25-jun-08 3dkm
Title: crystal structure of the hectd1 cph domain
Author: j. r. walker, l. qiu, y. li, c. bountra, m. wolkstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: ubl conjugation pathway, structural genomics consortium, sgc;, ank repeat, ligase, nppsfa, national project on protein structural and functional analyses
- 3dkn.pdb.
protein transport/rna 25-jun-08 3dkn
(cryo-electron microscopy)
Title: sec61 in the canine ribosome-channel complex from the endoplasmic reticulum
Author: j. -f. menetret, c. akey
Keywords: cryo-electron microscopy, co- translational translocation, endoplasmic reticulum, protein transport/rna complex
- 3dko.pdb.
transferase 25-jun-08 3dko
F
Title: complex between the kinase domain of human ephrin type-a receptor 7 (epha7) and inhibitor alw-ii-49-7
Author: j. r. walker, f. syeda, n. gray, c. butler-cole, c. bountra, m. wolkstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe- paganon, structural genomics consortium (sgc)
Keywords: membrane, phosphoprotein, polymorphism, nppsfa, national project on protein structural and functional analyses
- 3dl5.pdb.
oxidoreductase 26-jun-08 3dl5
Title: crystal structure of the a287f active site mutant of ts- dhfr from cryptosporidium hominis
Author: m. a. vargo, w. e. martucci, k. s. anderson
Keywords: enzyme-ligand complex, , oxidoreductase
- 3dl6.pdb.
oxidoreductase 26-jun-08 3dl6
Title: crystal structure of the a287f/s290g active site mutant of ts-dhfr from cryptosporidium hominis
Author: w. e. martucci, m. a. vargo, k. s. anderson
Keywords: enzyme-ligand complex, oxidoreductase
- 3dlj.pdb.
hydrolase 27-jun-08 3dlj
Zn
Title: crystal structure of human carnosine dipeptidase 1
Author: a. dong, e. dobrovetsky, a. seitova, h. he, w. tempel, i. kozieradzki, c. h. arrowsmith, j. weigelt, c. bountra, a. m. edwards, a. bochkarev, d. cossar, structural genomics consortium (sgc)
Keywords: protease, secreted, zinc
- 3dlq.pdb.
cytokine/cytokine receptor 28-jun-08 3dlq
Title: crystal structure of the il-22/il-22r1 complex
Author: l. bleicher, p. r. de moura, l. watanabe, d. colau, l. dumoutier, j. - c. renauld, i. polikarpov
Keywords: fibronectin-iii, cytokine, glycoprotein, polymorphism, secreted, membrane, receptor, transmembrane, cytokine/cytokine receptor complex
- 3dm1.pdb.
transcription 30-jun-08 3dm1
Title: crystal structure of the complex of human chromobox homolog 3 (cbx3) with peptide
Author: m. f. amaya, m. ravichandran, p. loppnau, i. kozieradzki, a. m. edwards, c. h. arrowsmith, j. weigelt, c. bountra, a. bochkarev, j. min, h. ouyang, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc, chromatin regulator, nucleus, phosphoprotein, repressor, transcription, transcription regulation
- 3dnl.pdb.
viral protein 02-jul-08 3dnl
(cryo-electron microscopy)
Title: molecular structure for the hiv-1 gp120 trimer in the b12- bound state
Author: m. j. borgnia, j. liu, a. bartesaghi, g. sapiro, s. subramaniam
Keywords: palmitate, viral immunoevasion, virion, viral protein
- 3dnn.pdb.
viral protein 02-jul-08 3dnn
(cryo-electron microscopy)
Title: molecular structure for the hiv-1 gp120 trimer in the unliganded state
Author: m. j. borgnia, j. liu, a. bartesaghi, g. sapiro, s. subramaniam
Keywords: palmitate, viral immunoevasion, virion, viral protein
- 3dno.pdb.
viral protein 02-jul-08 3dno
(cryo-electron microscopy)
Title: molecular structure for the hiv-1 gp120 trimer in the cd4- bound state
Author: m. j. borgnia, j. liu, a. bartesaghi, g. sapiro, s. subramaniam
Keywords: palmitate, viral immunoevasion, virion, viral protein
- 3dny.pdb.
cell cycle 03-jul-08 3dny
(cryo-electron microscopy)
Title: fitting of the eef2 crystal structure into the cryo-em density map of the eef2.80s.alf4-.gdp complex
Author: j. sengupta, j. frank
Keywords: 80s ribosome, alf4-, gdp, gtpase, translocation, cytoplasm, elongation factor, gtp- binding, nucleotide-binding, phosphoprotein, protein biosynthesis, rna-binding, rrna-binding, cell cycle
- 3dom.pdb.
transcription 04-jul-08 3dom
Title: crystal structure of the complex between tfb5 and the c- terminal domain of tfb2
Author: d. e. kainov, j. cavarelli, j. m. egly, a. poterszman
Keywords: heterodimer, beta-alpha-beta split, beta-strand addition, dna damage, dna excision, dna repair, nucleus, transcription, transcription regulation
- 3dpg.pdb.
hydrolase/dna 08-jul-08 3dpg
Ca
Title: sgrai with noncognate dna bound
Author: p. w. dunten, n. c. horton, e. j. little
Keywords: base-pair mismatch, hydrolase/dna complex
- 3dsi.pdb.
lyase 12-jul-08 3dsi
Fe
Title: crystal structure of arabidopsis thaliana allene oxide synthase (aos, cytochrome p450 74a, cyp74a) complexed with 13(s)-hot at 1.60 a resolution
Author: d. s. lee, p. nioche, c. s. raman
Keywords: lyase, chloroplast, fatty acid biosynthesis, heme, iron, lipid synthesis, metal-binding, oxylipin biosynthesis, plastid, transit peptide
- 3dsj.pdb.
lyase 12-jul-08 3dsj
Fe
Title: crystal structure of arabidopsis thaliana allene oxide synthase variant (f137l) (at-aos(f137l), cytochrome p450 74a, cyp74a) complexed with 13(s)-hod at 1.60 a resolution
Author: d. s. lee, p. nioche, c. s. raman
Keywords: lyase, chloroplast, fatty acid biosynthesis, heme, iron, lipid synthesis, metal-binding, oxylipin biosynthesis, plastid, transit peptide
- 3dsk.pdb.
lyase 12-jul-08 3dsk
Fe
Title: crystal structure of arabidopsis thaliana allene oxide synthase variant (f137l) (at-aos(f137l), cytochrome p450 74a, cyp74a) complexed with 12r,13s-vernolic acid at 1.55 a resolution
Author: d. s. lee, p. nioche, c. s. raman
Keywords: chloroplast, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding, oxylipin biosynthesis, plastid, transit peptide
- 3duh.pdb.
immune system/cytokine 17-jul-08 3duh
Title: structure of interleukin-23
Author: p. j. lupardus, k. c. garcia
Keywords: immune system/cytokine complex
- 3dvo.pdb.
hydrolase/dna 18-jul-08 3dvo
Ca
Title: sgrai with cognate dna and calcium bound
Author: p. w. dunten, n. c. horton, e. j. little
Keywords: hydrolase/dna complex
- 3dw9.pdb.
hydrolase/dna 21-jul-08 3dw9
Mn
Title: sgrai with cognate dna and manganese bound
Author: p. w. dunten, n. c. horton, e. j. little
Keywords: hydrolase/dna complex
- 3dwu.pdb.
biosynthetic protein 23-jul-08 3dwu
(cryo-electron microscopy)
Title: transition-state model conformation of the switch i region fitted into the cryo-em map of the eef2.80s.alf4.gdp complex
Author: p. nissen, j. nyborg, m. kjeldgaard
Keywords: biosynthetic protein
- 3dyd.pdb.
transferase 27-jul-08 3dyd
Title: human tyrosine aminotransferase
Author: t. karlberg, m. moche, j. andersson, c. h. arrowsmith, h. berglund, r. collins, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, t. kotenyova, l. lehtio, m. e. nilsson, p. nordlund, t. nyman, k. olesen, c. persson, j. sagemark, a. g. thorsell, l. tresaugues, s. van den berg, j. weigelt, m. welin, m. wikstrom, m. wisniewska, h. schuler, structural genomics consortium (sgc)
Keywords: tyrosine, sgc, structural genomics, structural genomics consortium, aminotransferase, disease mutation, phenylalanine catabolism, pyridoxal phosphate, transferase, tyrosine catabolism
- 3dze.pdb.
electron transport 29-jul-08 3dze
Mg Cd
Title: crystal structure of bovine coupling factor b bound with cadmium
Author: j. k. lee, r. m. stroud, g. i. belogrudov
Keywords: cf(0), hydrogen ion transport, ion transport, membrane, mitochondrion, mitochondrion inner membrane, transit peptide, transport, transport protein, electron transport
- 3dzv.pdb.
transferase 30-jul-08 3dzv
Se
Title: crystal structure of 4-methyl-5-(beta-hydroxyethyl)thiazole kinase (np_816404.1) from enterococcus faecalis v583 at 2.57 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: thiamine biosynthesis, transferase, hydroxyethylthiazole kinase family
- 3dzx.pdb.
hydrolase activator 30-jul-08 3dzx
Title: crystal structure of the rabgap domain of human tbc1d22b
Author: l. nedyalkova, y. tong, w. tempel, y. shen, f. mackenzie, c. h. arrowsmith, a. m. edwards, c. bountra, m. wilkstrom, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: gtpase activator, tbc1, structural genomics, structural genomics consortium, sgc, gtpase activation, signaling protein, hydrolase activator
- 3e0k.pdb.
transferase 31-jul-08 3e0k
Se
Title: crystal structure of c-termianl domain of n-acetylglutamate synthase from vibrio parahaemolyticus
Author: c. chang, g. shackelford, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: cytoplasm, transferase
- 3e0r.pdb.
hydrolase 31-jul-08 3e0r
Cl Se
Title: crystal structure of cppa protein from streptococcus pneumoniae tigr4
Author: b. nocek, r. mulligan, j. abdullah, z. otwinowski, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: c3-degrading proteinase, mcsg, psi, sad, structural genomics, protein structure initiative, midwest center for structural genomics, hydrolase
- 3e0v.pdb.
transferase 01-aug-08 3e0v
Title: crystal structure of pyruvate kinase from leishmania mexicana in complex with sulphate ions
Author: l. b. tulloch, l. a. gillmore, m. d. walkinshaw
Keywords: kinase, nad+ nadh, adp, atp, phosphoenolpyruvate, pep, glycolysis, trypanosomatid, leishmania, mexicana, allosteric enzyme, magnesium, metal-binding, transferase
- 3e0w.pdb.
transferase 01-aug-08 3e0w
Title: crystal structure of pyruvate kinase from leishmania mexicana
Author: l. b. tulloch, l. a. gillmore, m. d. walkinshaw
Keywords: kinase, nad+ nadh, adp, atp, phosphoenolpyruvate, pep, glycolysis, trypanosomatid, leishmania, mexicana, allosteric enzyme, magnesium, metal-binding, transferase
- 3e11.pdb.
structural genomics, unknown function 01-aug-08 3e11
Ca Se
Title: crystal structure of predicted zincin-like metalloprotease (yp_873820.1) from acidothermus cellulolyticus 11b at 1.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: predicted zincin-like metalloprotease, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, domain of unknown function (duf1025), unknown function
- 3e15.pdb.
hydrolase 01-aug-08 3e15
Cl K Se
Title: 6-phosphogluconolactonase from plasmodium vivax
Author: t. l. arakaki, e. a. merritt
Keywords: malaria, carbohydrate metabolism, glucose metabolism, nadp, oxidoreductase, , hydrolase
- 3e1s.pdb.
hydrolase 04-aug-08 3e1s
Title: structure of an n-terminal truncation of deinococcus radiodurans recd2
Author: k. saikrishnan, s. p. griffiths, n. cook, r. court, d. b. wigley
Keywords: atp-binding, nucleotide-binding, hydrolase
- 3e2g.pdb.
ligase 05-aug-08 3e2g
Se
Title: crystal structure of the human e2-like ubiquitin-fold modifier conjugating enzyme 1 (ufc1). northeast structural genomics consortium target hr41
Author: f. forouhar, m. abashidze, j. seetharaman, c. k. ho, h. janjua, k. cunningham, l. c. ma, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, polymorphism, ubl conjugation pathway, ligase
- 3e2j.pdb.
electron transport 05-aug-08 3e2j
Mg
Title: crystal structure of bovine coupling factor b
Author: r. m. stroud, j. k. lee, g. i. belogrudov
Keywords: cf0, hydrogen ion transport, inner membrane, ion transport, membrane, mitochondrion, transit peptide, transport, electron transport
- 3e2m.pdb.
cell adhesion 05-aug-08 3e2m
F
Title: lfa-1 i domain bound to inhibitors
Author: l. f. silvian
Keywords: leukocyte function associated antigen-1, alternative splicing, calcium, cell adhesion, glycoprotein, magnesium, membrane, polymorphism, receptor, transmembrane
- 3e2u.pdb.
protein binding 06-aug-08 3e2u
Zn
Title: crystal structure of the zink-knuckle 2 domain of human clip-170 in complex with cap-gly domain of human dynactin- 1 (p150-glued)
Author: a. weisbrich, s. honnappa, g. capitani, m. o. steinmetz
Keywords: cytoskeleton, dynein, microtubule, motor protein, phosphoprotein, polymorphism
- 3e39.pdb.
flavoprotein 06-aug-08 3e39
Se
Title: crystal structure of putative nitroreductase in complex with fmn (yp_387283.1) from desulfovibrio desulfuricans g20 at 1.70 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative nitroreductase in complex with fmn, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, nitroreductase family, unknown function, flavoprotei...
- 3e3p.pdb.
transferase 07-aug-08 3e3p
Title: glycogen synthase kinase from leishmania major
Author: t. l. arakaki, e. a. merritt
Keywords: glycogen synthase kinase, leishmaniasis, kinase, transferase
- 3e48.pdb.
structural genomics, unknown function 11-aug-08 3e48
Mg Se
Title: crystal structure of a nucleoside-diphosphate-sugar epimerase (sav0421) from staphylococcus aureus, northeast structural genomics consortium target zr319
Author: f. forouhar, m. abashidze, j. seetharaman, l. mao, h. janjua, r. xiao, c. ciccosanti, e. l foote, d. wang, s. tong, j. k everett, t. b. acton, g. t. montelione, l. tong, j. f hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 3e4f.pdb.
transferase 11-aug-08 3e4f
Se
Title: crystal structure of ba2930- a putative aminoglycoside n3- acetyltransferase from bacillus anthracis
Author: m. m. klimecka, m. chruszcz, t. skarina, o. onopryienko, m. cymborowski, a. savchenko, a. edwards, w. anderson, w. minor, center for structural genomics of infectious diseases (csgid)
Keywords: bacillus anthracis, antrax, transferase, structural genomics, center for structural genomics of infectious diseases, csgid
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