Recent PDB releases or updates: week of 25 July 2008

• 1pd6.pdb. structural protein 19-may-03 1pd6 He Hg (NMR, 28 structures)
  Title: the nmr structure of domain c2 of human cardiac myosin binding protein c
  Author: a. ababou, m. gautel, m. pfuhl
  Keywords: structural protein
  
• 1s9u.pdb. structural genomics, unknown function 05-feb-04 1s9u Se
  Title: atomic structure of a putative anaerobic dehydrogenase component
  Author: y. qiu, r. zhang, v. tereshko, y. kim, f. collart, a. joachimiak, a. kossiakoff, midwest center for structural genomics (mcsg)
  Keywords: anaerobic dehydrogenases component, psi, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
  
• 1sg9.pdb. unknown function 23-feb-04 1sg9
  Title: crystal structure of thermotoga maritima protein hemk, an n5-glutamine methyltransferase
  Author: r. agarwal, s. swaminathan, s. k. burley, new york sgx research center for structural genomics (nysgxrc)
  Keywords: protein structure initiative, hemk protein, hypothetical protein, psi, new york sgx research center for structural genomics, nysgxrc, unknown function
  
• 2b1z.pdb. hormone/growth factor receptor 16-sep-05 2b1z
  Title: human estrogen receptor alpha ligand-binding domain in complex with 17methyl-17alpha-dihydroequilenin and a glucoc interacting protein 1 nr box ii peptide
  Author: s. s. rajan, r. w. hsieh, s. k. sharma, g. l. greene
  Keywords: lbd, grip peptide, hormone/growth factor receptor complex
  
• 2bb4.pdb. hydrolase 17-oct-05 2bb4 Ca
  Title: porcine pancreatic elastase complexed with beta-casomorphin- 7 and asp-phe at ph 5.0
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bd2.pdb. hydrolase 20-oct-05 2bd2 Ca
  Title: porcine pancreatic elastase complexed with beta-casomorphin- 7 and arg-phe at ph 5.0
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bd3.pdb. hydrolase 20-oct-05 2bd3 Ca
  Title: porcine pancreatic elastase complexed with beta-casomorphin- 7 and lys-ala-nh2 at ph 5.0
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bd4.pdb. hydrolase 20-oct-05 2bd4 Ca
  Title: porcine pancreatic elastase complexed with beta-casomorphin- 7 and lys-ser at ph 5.0
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bd5.pdb. hydrolase 20-oct-05 2bd5 Ca
  Title: porcine pancreatic elastase complexed with beta-casomorphin- 7 and lys-ser at ph 5 and immersed in ph 9 buffer for 30 seconds
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bd7.pdb. hydrolase 20-oct-05 2bd7 Ca
  Title: porcine pancreatic elastase complexed with beta-casomorphin- 7 and arg-phe at ph 5.0 (50 min soak)
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bd8.pdb. hydrolase 20-oct-05 2bd8 Ca
  Title: porcine pancreatic elastase complexed with beta-casomorphin- 7 and arg-phe at ph 5.0 (50 min soak) and immersed in ph 9 buffer for 30 seconds
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bd9.pdb. hydrolase 20-oct-05 2bd9 Ca
  Title: porcine pancreatic elastase complexed with beta-casomorphin- 7 and arg-phe at ph 5.0 (50 min soak) and immersed in ph 9 buffer for 28 seconds (2nd ph jump)
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bda.pdb. hydrolase 20-oct-05 2bda Ca
  Title: porcine pancreatic elastase complexed with n-acetyl-npi and ala-ala at ph 5.0
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bdb.pdb. hydrolase 20-oct-05 2bdb Ca
  Title: porcine pancreatic elastase complexed with asn-pro-ile and ala-ala at ph 5.0
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bdc.pdb. hydrolase 20-oct-05 2bdc Ca
  Title: porcine pancreatic elastase complexed with asn-pro-ile at ph 5.0
  Author: b. liu, c. j. schofield, r. c. wilmouth
  Keywords: hydrolase
  
• 2bgz.pdb. bacterial motiility 22-dec-04 2bgz (cryo-electron microscopy)
  Title: atomic model of the bacterial flagellar based on docking an x-ray derived hook structure into an em map.
  Author: t. r. shaikh, d. r. thomas, j. z. chen, f. a. samatey, h. matsunami, k. imada, k. namba, d. j. derosier
  Keywords: helical reconstruction, electron microscopy, model refinement,bacterial motility, flagellum
  
• 2e3e.pdb. antimicrobial protein 22-nov-06 2e3e He Hg (NMR, 9 structures)
  Title: nmr structure of def-bbb, a mutant of anopheles defensin def-aaa
  Author: c. landon, f. barbault, f. vovelle
  Keywords: antimicrobial protein
  
• 2e3f.pdb. antimicrobial protein 22-nov-06 2e3f He Hg (NMR, 10 structures)
  Title: nmr structure of def-bat, a mutant of anopheles defensin def-aaa
  Author: c. landon, f. barbault, f. vovelle
  Keywords: antimicrobial protein
  
• 2e3g.pdb. antimicrobial protein 22-nov-06 2e3g Hg (NMR, 10 structures)
  Title: nmr structure of def-daa, a mutant of anopheles defensin def-aaa
  Author: c. landon, f. barbault, f. vovelle
  Keywords: antimicrobial protein
  
• 2gok.pdb. hydrolase 13-apr-06 2gok Cl Mg Fe
  Title: crystal structure of the imidazolonepropionase from agrobacterium tumefaciens at 1.87 a resolution
  Author: r. tyagi, d. kumaran, s. swaminathan, s. k. burley, new york sgx research center for structural genomics (nysgxrc)
  Keywords: imidazolonepropionase, protein structure initiative ii (psi-ii), histidine metabolism, structural genomics, new york sgx research center for structural genomics, nysgxrc, hydrolase
  
• 2gtv.pdb. isomerase 28-apr-06 2gtv He Hg (NMR, 10 structures)
  Title: nmr structure of monomeric chorismate mutase from methanococcus jannaschii
  Author: b. r. vogeli
  Keywords: isomerase
  
• 2hqu.pdb. hydrolase 19-jul-06 2hqu Cl Mg
  Title: human dutpase in complex with alpha,beta-iminodutp and magnesium ion
  Author: o. barabas, b. varga, b. g. vertessy
  Keywords: protein-substrate analogue ligand complex, hydrolase
  
• 2icy.pdb. transferase 13-sep-06 2icy
  Title: crystal structure of a putative udp-glucose pyrophosphorylase from arabidopsis thaliana with bound udp- glucose
  Author: j. g. mccoy, g. e. wesenberg, g. n. phillips jr. , e. bitto, c. a. bingman, center for eukaryotic structural genomics (cesg)
  Keywords: transferase
  
• 2inp.pdb. oxidoreductase 08-oct-06 2inp Zn Fe
  Title: structure of the phenol hydroxylase-regulatory protein complex
  Author: m. s. sazinsky, p. w. dunten, m. s. mccormick, s. j. lippard
  Keywords: diiron, four-helix bundle, regulatory protein, oxidoreductase
  
• 2jja.pdb. rna 28-mar-08 2jja Co Mg Cu Na
  Title: crystal structure of gna with synthetic copper base pair
  Author: m. k. schlegel, l. -o. essen, e. meggers
  Keywords: synthetic base pair, glycol nucleic acid, gna, rna
  
• 2jjc.pdb. chaperone 31-mar-08 2jjc
  Title: hsp90 alpha atpase domain with bound small molecule fragment
  Author: m. congreve, g. chessari, d. tisi, a. j. woodhead
  Keywords: atpase, chaperone, cytoplasm, heat shock, nucleotide-binding, alternative splicing, atp-binding, phosphoprotein, stress response
  
• 2jjk.pdb. hydrolase 09-apr-08 2jjk Cl
  Title: fructose-1,6-bisphosphatase(d-fructose-1,6-bisphosphate -1-phosphohydrolase) (e.c.3.1.3.11) complexed with a dual binding amp site inhibitor
  Author: a. ruf, c. joseph, j. benz, b. fol, t. tetaz, p. hebeisen
  Keywords: disease mutation, allosteric enzyme, zinc, hydrolase, polymorphism, gluconeogenesis, carbohydrate metabolism
  
• 2jss.pdb. chaperone/nuclear protein 11-jul-07 2jss He Hg (NMR, 10 structures)
  Title: nmr structure of chaperone chz1 complexed with histone h2a.z-h2b
  Author: z. zhou, h. feng, d. f. hansen, h. kato, e. luk, d. i. freedberg, l. e. kay, c. wu, y. bai
  Keywords: intrinsically unfolded protein, chaperone/structural protein complex, chaperone/nuclear protein complex
  
• 2jsy.pdb. oxidoreductase 17-jul-07 2jsy He Hg (NMR, 21 structures)
  Title: solution structure of tpx in the oxidized state
  Author: c. jin, j. lu
  Keywords: antioxidant, oxidoreductase, peroxidase
  
• 2jsz.pdb. oxidoreductase 17-jul-07 2jsz He Hg (NMR, 21 structures)
  Title: solution structure of tpx in the reduced state
  Author: c. jin, j. lu, f. yang
  Keywords: antioxidant, oxidoreductase, peroxidase
  
• 2jti.pdb. oxidoreductase/electron transport 01-aug-07 2jti He Hg Fe (NMR, 10 structures)
  Title: solution structure of the yeast iso-1-cytochrome c (t12a) : yeast cytochrome c peroxidase complex
  Author: m. ubbink, a. n. volkov
  Keywords: oxidoreductase/electron transport complex
  
• 2jw5.pdb. protein binding 05-oct-07 2jw5 He Hg (NMR, 12 structures)
  Title: polymerase lambda brct domain
  Author: g. a. mueller, a. f. moon, e. f. derose, l. c. pedersen, r. e. london
  Keywords: nucleotidyltransferase, nucleus, phosphorylation, polymorphism, transferase, protein binding
  
• 2jz7.pdb. selenium-binding protein 28-dec-07 2jz7 He Hg (NMR, 10 structures)
  Title: solution nmr structure of selenium-binding protein from methanococcus vannielii
  Author: m. suzuki, t. c. stadtman, n. tjandra
  Keywords: selenium-binding protein
  
• 2k0a.pdb. metal binding protein 31-jan-08 2k0a He Hg Zn (NMR, 20 structures)
  Title: 1h, 15n and 13c chemical shift assignments for rds3 protein
  Author: n. loening, a. van roon, j. yang, k. nagai, d. neuhaus
  Keywords: topological knot, mrna processing, mrna splicing, nucleus, spliceosome, rna binding protein, metal binding protein
  
• 2k0c.pdb. metal binding protein 31-jan-08 2k0c He Hg Zn (NMR, 20 structures)
  Title: zinc-finger 2 of nup153
  Author: j. a. bangert, n. schrader, i. r. vetter, r. stoll
  Keywords: dna-binding, metal-binding, mrna transport, nuclear pore complex, nucleus, phosphoprotein, protein transport, translocation, transport, metal binding protein
  
• 2k42.pdb. signaling protein 27-may-08 2k42 He Hg (NMR, 20 structures)
  Title: solution structure of the gtpase binding domain of wasp in complex with espfu, an ehec effector
  Author: h. -c. cheng, b. m. skehan, k. g. campellone, j. m. leong, m. k. rosen
  Keywords: espfu, gbd, autoinhibition, cytoplasm, cytoskeleton, disease mutation, phosphoprotein, signaling protein
  
• 2k4z.pdb. structural genomics, unknown function 22-jun-08 2k4z He Hg (NMR, 20 structures)
  Title: solution nmr structure of allochromatium vinosum dsrr: northeast structural genomics consortium target op5
  Author: j. r. cort, c. dahl, f. grimm, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, metal binding protein, unknown function
  
• 2k5t.pdb. transferase 30-jun-08 2k5t He Hg Ho (NMR, 20 structures)
  Title: solution nmr structure of putative n-acetyl transferase yhhk from e. coli bound to coenzyme a: northeast structural genomics consortium target et106
  Author: j. r. cort, a. yee, g. t. montelione, c. h. arrowsmith, m. a. kennedy, northeast structural genomics consortium (nesg)
  Keywords: coa, bound ligand, coenzyme a, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
  
• 2ny8.pdb. antimicrobial protein 20-nov-06 2ny8 Hg (NMR, 10 structures)
  Title: nmr structure of antibacterial defensin def-aaa from the insect anopheles gambiae
  Author: c. landon, f. barbault, f. vovelle
  Keywords: antimicrobial protein
  
• 2ny9.pdb. antimicrobial protein 20-nov-06 2ny9 Hg (NMR, 10 structures)
  Title: nmr structure of def-abb, a mutant of anopheles defensin def-aaa
  Author: c. landon, f. barbault, f. vovelle
  Keywords: antimicrobial protein
  
• 2nz3.pdb. antimicrobial protein 22-nov-06 2nz3 Hg (NMR, 10 structures)
  Title: nmr structure of def-acaa, a mutant of anopheles defensin def-aaa
  Author: c. landon, f. barbault, f. vovelle
  Keywords: antimicrobial protein
  
• 2o6x.pdb. hydrolase 08-dec-06 2o6x
  Title: crystal structure of procathepsin l1 from fasciola hepatica
  Author: l. s. brinen, j. p. dalton, s. geiger, r. marion, c. m. stack
  
  
• 2o93.pdb. transcription/dna 13-dec-06 2o93
  Title: crystal structure of nfat bound to the hiv-1 ltr tandem kappab enhancer element
  Author: d. l. bates, l. chen
  Keywords: transcription/dna complex
  
• 2or3.pdb. chaperone 01-feb-07 2or3
  Title: pre-oxidation complex of human dj-1
  Author: a. c. witt, m. lakshminarasimhan, m. a. wilson
  Keywords: nucleophile elbow, chaperone
  
• 2p72.pdb. transferase 19-mar-07 2p72 Mn
  Title: crystal structure of a glycosyltransferase involved in the glycosylation of the major capsid of pbcv-1
  Author: y. zhang, y. xiang, j. l. van etten, m. g. rossmann
  Keywords: glycosyltransferase, pbcv-1
  
• 2p8k.pdb. oxidoreductase 22-mar-07 2p8k
  Title: selective screening and design to identify inhibitors of leishmania major pteridine reductase 1.
  Author: k. mcluskey, f. gibellini, w. n. hunter
  Keywords: leishmania, trypanosoma, ptr1, inhibitor, oxidoreductase
  
• 2q2n.pdb. transferase 29-may-07 2q2n Mg
  Title: crystal structure of bacillus subtilis ferrochelatase in complex with deuteroporphyrin ix 2,4-disulfonic acid dihydrochloride
  Author: t. karlberg, o. h. thorvaldsen, s. al-karadaghi
  Keywords: transferase
  
• 2q3j.pdb. lyase 30-may-07 2q3j Mg
  Title: crystal structure of the his183ala variant of bacillus subtilis ferrochelatase in complex with n-methyl mesoporphyrin
  Author: t. karlberg, o. h. thorvaldsen, s. al-karadaghi
  Keywords: lyase
  
• 2q8v.pdb. protein binding 12-jun-07 2q8v
  Title: nbla protein from t. vulcanus crystallized with urea
  Author: n. adir, m. dines
  Keywords: protein binding
  
• 2q9u.pdb. oxidoreductase 14-jun-07 2q9u Fe
  Title: crystal structure of the flavodiiron protein from giardia intestinalis
  Author: a. di matteo, f. m. scandurra, f. testa, e. forte, p. sarti, m. brunori, a. giuffre
  Keywords: beta lactamase like, oxidoreductase
  
• 2qae.pdb. oxidoreductase 15-jun-07 2qae
  Title: crystal structure analysis of trypanosoma cruzi lipoamide dehydrogenase
  Author: c. werner, r. l. krauth-siegel, m. t. stubbs, g. klebe
  
  
• 2qek.pdb. ribonucleic acid 26-jun-07 2qek Mg K
  Title: hiv-1 subtype f dis rna extended duplex form
  Author: s. freisz, e. ennifar, p. dumas
  
  
• 2qhc.pdb. hydrolase 02-jul-07 2qhc
  Title: the influence of i47a mutation on reduced susceptibility to the protease inhibitor lopinavir
  Author: j. brynda, s. klara, m. kozisek, m. lepsik, l. machala, j. konvalinka
  Keywords: resistant strain, hydrolase
  
• 2qi8.pdb. signaling protein, transferase 03-jul-07 2qi8
  Title: crystal structure of drug resistant src kinase domain
  Author: a. michalczyk, h. b. rode, c. gruetter, d. rauh
  Keywords: signaling protein, transferase
  
• 2qkg.pdb. toxin 11-jul-07 2qkg
  Title: crystal structure of insecticidal delta-endotoxin cry8ea1 from bacillus thuringiensis at 2.2 angstroms resolution
  Author: s. y. guo, s. ye, f. p. song, j. zhang, l. wei, c. l. shu
  Keywords: cry8e
  
• 2qlg.pdb. fluorescent protein 12-jul-07 2qlg
  Title: mplum
  Author: x. shu, s. j. remington
  Keywords: acylimine
  
• 2qlh.pdb. fluorescent protein 12-jul-07 2qlh
  Title: mplum i65l mutant
  Author: x. shu, s. j. remington
  Keywords: acylimine
  
• 2qli.pdb. fluorescent protein 12-jul-07 2qli
  Title: mplum e16q mutant
  Author: x. shu, s. j. remington
  Keywords: acylimine
  
• 2qls.pdb. transport protein 13-jul-07 2qls Fe
  Title: crystal structure of hemoglobin from dog (canis familiaris) at 3.5 angstrom resolution
  Author: p. charles, s. sundaresan, k. palani, k. neeelagandan, m. n. ponnuswamy
  Keywords: transport, oxygen transport, heme, transport protein
  
• 2qmb.pdb. transport protein 15-jul-07 2qmb Fe
  Title: structure determination of haemoglobin from turkey(meleagris gallopavo) at 2.8 angstrom resolution
  Author: p. charles, s. sundaresan, m. n. ponnuswamy
  Keywords: transport, oxygen transport, heme, transport protein
  
• 2qmi.pdb. hydrolase 16-jul-07 2qmi Lu
  Title: structure of the octameric penicillin-binding protein homologue from pyrococcus abyssi
  Author: v. delfosse, e. girard, l. moulinier, p. schultz, c. mayer
  Keywords: octamer, lu-hpdo3a, pbp, archaea, hydrolase
  
• 2qmp.pdb. hydrolase 16-jul-07 2qmp
  Title: crystal structure of hiv-1 protease complexed with pl-100
  Author: t. j. allison
  Keywords: aspartyl protease, hydrolase, multifunctional enzyme, nucleotidyltransferase, rna- directed dna polymerase, transferase
  
• 2qms.pdb. signaling protein 16-jul-07 2qms
  Title: crystal structure of a signaling molecule
  Author: c. j. porter, m. c. wilce, j. a. wilce
  Keywords: alpha/beta fold, signaling protein
  
• 2qn1.pdb. transferase, apoptosis 17-jul-07 2qn1
  Title: glycogen phosphorylase b in complex with asiatic acid
  Author: s. e. zographos, d. d. leonidas, k. -m. alexacou, j. hayes, n. g. oikonomakos
  Keywords: type 2 diabetes, transferase, apoptosis
  
• 2qn2.pdb. transferase, apoptosis 17-jul-07 2qn2
  Title: glycogen phosphorylase b in complex with maslinic acid
  Author: s. e. zographos, d. d. leonidas, k. -m. alexacou, j. hayes, n. g. oikonomakos
  Keywords: type 2 diabetes, transferase, apoptosis
  
• 2qn3.pdb. transferase 17-jul-07 2qn3 Cl
  Title: glycogen phosphorylase in complex with n-4-chlorobenzoyl-n- beta-d-glucopyranosyl urea
  Author: e. d. chrysina, c. tiraidis, k. -m. alexacou, s. e. zographos, d. d. leonidas, n. g. oikonomakos
  Keywords: type 2 diabetes, acetylation, allosteric enzyme, carbohydrate metabolism, glycogen metabolism, glycosyltransferase, nucleotide-binding, phosphoprotein, pyridoxal phosphate, transferase
  
• 2qn4.pdb. hydrolase inhibitor 18-jul-07 2qn4
  Title: structure and function study of rice bifunctional alpha- amylase/subtilisin inhibitor from oryza sativa
  Author: w. y. peng, y. h. lin, y. c. huang, h. h. guan, y. c. hsieh, c. j. chen
  Keywords: amylase inhibitor, subtilisin inhibitor, alpha- amylase inhibitor, protease inhibitor, serine protease inhibitor, hydrolase inhibitor
  
• 2qn5.pdb. hydrolase inhibitor/hydrolase 18-jul-07 2qn5
  Title: crystal structure and functional study of the bowman-birk inhibitor from rice bran in complex with bovine trypsin
  Author: h. t. li, y. h. lin, h. h. guan, y. c. hsieh, a. h. j. wang, c. j. chen
  Keywords: secreted, zymogen, hydrolase inhibitor/hydrolase complex, hetero-dimer
  
• 2qn7.pdb. transferase 18-jul-07 2qn7
  Title: glycogen phosphorylase b in complex with n-4-hydroxybenzoyl- n'-4-beta-d-glucopyranosyl urea
  Author: e. d. chrysina, k. tiraidis, k. -m. alexacou, s. e. zographos, d. d. leonidas, n. g. oikonomakos
  Keywords: type 2 diabetes, acetylation, allosteric enzyme, carbohydrate metabolism, glycogen metabolism, glycosyltransferase, nucleotide-binding, phosphoprotein, pyridoxal phosphate, transferase
  
• 2qn8.pdb. transferase 18-jul-07 2qn8
  Title: glycogen phosphorylase b in complex with n-4-nitrobenzoyl- n'-beta-d-glucopyranosyl urea
  Author: e. d. chrysina, c. tiraidis, k. -m. alexacou, s. e. zographos, d. d. leonidas, n. g. oikonomakos
  Keywords: type 2 diabetes, acetylation, allosteric enzyme, carbohydrate metabolism, glycogen metabolism, glycosyltransferase, nucleotide-binding, phosphoprotein, pyridoxal phosphate, transferase
  
• 2qn9.pdb. transferase 18-jul-07 2qn9
  Title: glycogen phosphorylase in complex with n-4-aminobenzoyl-n'- beta-d-glucopyranosyl urea
  Author: e. d. chrysina, c. tiraidis, k. -m. alexacou, s. e. zographos, d. d. leonidas, n. g. oikonomakos
  Keywords: type 2 diabetes, acetylation, allosteric enzyme, carbohydrate metabolism, glycogen metabolism, glycosyltransferase, nucleotide-binding, phosphoprotein, pyridoxal phosphate, transferase
  
• 2qnb.pdb. transferase 18-jul-07 2qnb
  Title: glycogen phosphorylase b in complex with n-benzoyl-n'-beta- d-glucopyranosyl urea
  Author: e. d. chrysina, c. tiraidis, k. -m. alexacou, s. e. zographos, d. d. leonidas, n. g. oikonomakos
  Keywords: type 2 diabetes, acetylation, allosteric enzyme, carbohydrate metabolism, glycogen metabolism, glycosyltransferase, nucleotide-binding, phosphoprotein, pyridoxal phosphate, transferase
  
• 2quz.pdb. signaling protein, hydrolase 07-aug-07 2quz Mg
  Title: crystal structure of the activating h-rask117r mutant in costello syndrome, bound to mg-gdp
  Author: a. parret, k. scheffzek
  Keywords: gtpase protein, costello syndrome, ras protein, signaling protein
  
• 2qve.pdb. transferase 08-aug-07 2qve F
  Title: crystal structure of sgtam bound to mechanism based inhibitor
  Author: c. v. christianson, t. j. montavon, s. d. bruner
  Keywords: aminomutase, enediyne, transferase
  
• 2r2r.pdb. transferase/dna 27-aug-07 2r2r
  Title: d(attagttataactaat) complexed with mmlv rt catalytic fragment
  Author: k. d. goodwin, m. a. lewis, e. c. long, m. m. georgiadis
  Keywords: transferase/dna complex
  
• 2r2s.pdb. transferase/dna 27-aug-07 2r2s Co
  Title: co(iii)bleomycinb2 bound to d(attagttataactaat) complexed with mmlv rt catalytic fragment
  Author: k. d. goodwin, m. a. lewis, e. c. long, m. m. georgiadis
  Keywords: transferase/dna complex
  
• 2r2t.pdb. transferase/dna 27-aug-07 2r2t
  Title: d(atttagttaactaaat) complexed with mmlv rt catalytic fragment
  Author: k. d. goodwin, m. a. lewis, e. c. long, m. m. georgiadis
  Keywords: rna-directed dna polymerase, transferase, transferase/dna complex
  
• 2r2u.pdb. transferase/dna 27-aug-07 2r2u
  Title: co(iii)bleomycinb2 bithiazole/c-terminal tail domain bound to d(atttagttaactaaat) complexed with mmlv rt catalytic fragment
  Author: k. d. goodwin, m. a. lewis, e. c. long, m. m. georgiadis
  Keywords: rna-directed dna polymerase, transferase, transferase/dna complex
  
• 2r6t.pdb. transferase 06-sep-07 2r6t Mg
  Title: structure of a r132k variant pduo-type atp:co(i)rrinoid adenosyltransferase from lactobacillus reuteri complexed with atp
  Author: m. st maurice, p. e. mera, j. c. escalante-semerena, i. rayment
  Keywords: atp binding
  
• 2r6x.pdb. transferase 06-sep-07 2r6x Mg
  Title: structure of a d35n variant pduo-type atp:co(i)rrinoid adenosyltransferase from lactobacillus reuteri complexed with atp
  Author: m. st maurice, p. e. mera, j. c. escalante-semerena, i. rayment
  Keywords: atp binding
  
• 2r75.pdb. cell cycle 07-sep-07 2r75 Mg
  Title: aquifex aeolicus ftsz with 8-morpholino-gtp
  Author: t. lappchen, v. a. pinas, a. f. hartog, g. j. koomen, c. schaffner- barbero, j. m. andreu, d. trambaiolo, j. lowe, a. juhem, a. v. popov, t. den blaauwen
  Keywords: tubulin-like, inhibitor, cell cycle
  
• 2r7k.pdb. ligase 09-sep-07 2r7k Cl
  Title: crystal structure of faicar synthetase (purp) from m. jannaschii complexed with amppcp and aicar
  Author: y. zhang, r. h. white, s. e. ealick
  Keywords: atp-binding, ligase, magnesium, manganese, metal-binding, nucleotide-binding
  
• 2r7l.pdb. ligase 09-sep-07 2r7l Cl
  Title: crystal structure of faicar synthetase (purp) from m. jannaschii complexed with atp and aicar
  Author: y. zhang, r. h. white, s. e. ealick
  Keywords: atp-binding, ligase, magnesium, manganese, metal-binding, nucleotide-binding
  
• 2r7m.pdb. ligase 09-sep-07 2r7m Cl
  Title: crystal structure of faicar synthetase (purp) from m. jannaschii complexed with amp
  Author: y. zhang, r. h. white, s. e. ealick
  Keywords: atp-binding, ligase, magnesium, manganese, metal-binding, nucleotide-binding
  
• 2r7n.pdb. ligase 09-sep-07 2r7n Cl
  Title: crystal structure of faicar synthetase (purp) from m. jannaschii complexed with adp and faicar
  Author: y. zhang, r. h. white, s. e. ealick
  Keywords: atp-binding, ligase, magnesium, manganese, metal-binding, nucleotide-binding
  
• 2r7z.pdb. transcription, transferase/dna/rna 10-sep-07 2r7z Mg Pt Zn
  Title: cisplatin lesion containing rna polymerase ii elongation complex
  Author: g. e. damsma, a. alt, f. brueckner, t. carell, p. cramer
  Keywords: nuclear protein, transcription bubble, damage recognition, elongation complex, transferase, transcription, transferase/dna/rna complex
  
• 2r84.pdb. unknown function 10-sep-07 2r84 Cl Na
  Title: crystal structure of purp from pyrococcus furiosus complexed with amp and aicar
  Author: y. zhang, r. h. white, s. e. ealick
  Keywords: unknown function
  
• 2r85.pdb. unknown function 10-sep-07 2r85 Cl Na
  Title: crystal structure of purp from pyrococcus furiosus complexed with amp
  Author: y. zhang, r. h. white, s. e. ealick
  Keywords: unknown function
  
• 2r86.pdb. unknown function 10-sep-07 2r86 Na
  Title: crystal structure of purp from pyrococcus furiosus complexed with atp
  Author: y. zhang, r. h. white, s. e. ealick
  Keywords: unknown function
  
• 2r87.pdb. unknown function 10-sep-07 2r87
  Title: crystal structure of purp from pyrococcus furiosus complexed with adp
  Author: y. zhang, r. h. white, s. e. ealick
  Keywords: unknown function
  
• 2r8g.pdb. replication, transferase/dna 10-sep-07 2r8g Ca
  Title: selectivity of nucleoside triphosphate incorporation opposite 1,n2-propanodeoxyguanosine (pdg) by the sulfolobus solfataricus dna polymerase dpo4 polymerase
  Author: y. wang, s. saleh, l. j. marnette, m. egli, m. p. stone
  Keywords: replication bypass, crystallography, translesion, polymerase, frameshifting, replication, transferase/dna complex
  
• 2r8h.pdb. replication, transferase/dna 10-sep-07 2r8h Ca
  Title: selectivity of nucleoside triphosphate incorporation opposite 1,n2-propanodeoxyguanosine (pdg) by the sulfolobus solfataricus dna polymerase dpo4 polymerase
  Author: y. wang, s. saleh, l. j. marnette, m. egli, m. p. stone
  Keywords: replication bypass, crystallography, translesion, polymerase, frameshifting, replication, transferase/dna complex
  
• 2r8i.pdb. replication, transferase/dna 10-sep-07 2r8i Ca
  Title: selectivity of nucleoside triphosphate incorporation opposite 1,n2-propanodeoxyguanosine (pdg) by the sulfolobus solfataricus dna polymerase dpo4 polymerase
  Author: y. wang, s. saleh, l. j. marnette, m. egli, m. p. stone
  Keywords: replication bypass, crystallography, translesion, polymerase, frameshifting, replication, transferase/dna complex
  
• 2r8s.pdb. immune system/rna 11-sep-07 2r8s Mg
  Title: high resolution structure of a specific synthetic fab bound to p4-p6 rna ribozyme domain
  Author: j. d. ye, v. tereshko, s. s. sidhu, s. koide, a. a. kossiakoff, j. a. piccirilli
  Keywords: fab-rna complex, immune system/rna complex
  
• 2rgh.pdb. oxidoreductase 01-oct-07 2rgh Se
  Title: structure of alpha-glycerophosphate oxidase from streptococcus sp.: a template for the mitochondrial alpha- glycerophosphate dehydrogenase
  Author: t. colussi, w. boles, t. c. mallett, p. a. karplus, a. claiborne
  Keywords: oxidoreductase
  
• 2rgo.pdb. oxidoreductase 04-oct-07 2rgo
  Title: structure of alpha-glycerophosphate oxidase from streptococcus sp.: a template for the mitochondrial alpha- glycerophosphate dehydrogenase
  Author: t. colussi, w. boles, t. c. mallett, p. a. karplus, a. claiborne
  Keywords: oxidoreductase
  
• 2rhp.pdb. cell adhesion 09-oct-07 2rhp Ca
  Title: the thrombospondin-1 polymorphism asn700ser associated with cornoary artery disease causes local and long-ranging changes in protein structure
  Author: c. b. carlson, j. l. keck, d. f. mosher
  Keywords: calcium-binding, glycosylated, jelly- roll, egf-like, lectin-like, cell adhesion, egf-like domain, glycoprotein, heparin-binding
  
• 2rjr.pdb. isomerase 15-oct-07 2rjr F
  Title: substrate mimic bound to sgtam
  Author: t. j. montavon, c. v. christianson, s. d. bruner
  Keywords: mio, aminomutase, c-1027, isomerase
  
• 2rjs.pdb. isomerase 15-oct-07 2rjs F
  Title: sgtam bound to substrate mimic
  Author: t. j. montavon, c. v. christianson, s. d. bruner
  Keywords: mio, aminomutase, c-1027, isomerase
  
• 2roz.pdb. peptide binding protein 25-apr-08 2roz He Hg (NMR, 20 structures)
  Title: structure of the c-terminal pid domain of fe65l1 complexed with the cytoplasmic tail of app reveals a novel peptide binding mode
  Author: h. li, s. koshiba, n. tochio, s. watanabe, t. harada, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, peptide binding protein
  
• 2v33.pdb. viral protein 11-jun-07 2v33
  Title: high resolution crystal structure of domain iii of e1 fusion glycoprotein of semliki forest virus
  Author: m. c. vaney, f. a. rey
  Keywords: transmembrane, viral protein
  
• 2v3q.pdb. transport protein 20-jun-07 2v3q
  Title: serendipitous discovery and x-ray structure of a human phosphate binding apolipoprotein
  Author: r. morales, a. berna, p. carpentier, m. elias, c. contreras-martel, f. renault, m. nicodeme, m. -l. chesne-seck, f. bernier, j. dupuy, c. schaeffer, h. diemer, a. van dorsselaer, j. c. fontecilla, p. masson, d. rochu, e. chabriere
  Keywords: hdl, missing gene, paraoxonase, phosphatemia, transport protein, transporter
  
• 2v6h.pdb. cell adhesion 18-jul-07 2v6h
  Title: crystal structure of the c1 domain of cardiac myosin binding protein-c
  Author: l. govata, l. carpenter, p. c. a. da fonseca, j. r. helliwell, p. j. rizkallah, e. flashman, n. e. chayen, c. redwood, j. m. squire
  Keywords: polymorphism, actin-binding, cell adhesion
  
• 2v6k.pdb. isomerase 19-jul-07 2v6k Na
  Title: structure of maleyl pyruvate isomerase, a bacterial glutathione-s-transferase in zeta class, in complex with substrate analogue dicarboxyethyl glutathione
  Author: d. shoemark, n. -y. zhou, p. a. williams, a. t. hadfield
  Keywords: gst, plasmid, pyruvate, bacterial, isomerase, biodegradation, maleyl pyruvate, fumaryl pyruvate
  
• 2v6s.pdb. lyase 20-jul-07 2v6s
  Title: medium resolution crystal structure of pterin-4a- carbinolamine dehydratase from toxoplasma gondii
  Author: s. cameron, s. a. fyffe, w. n. hunter
  Keywords: pterin, enzyme, toxoplasma, dehydratase
  
• 2v6t.pdb. lyase 20-jul-07 2v6t
  Title: crystal structure of a complex of pterin-4a-carbinolamine dehydratase from toxoplasma gondii with 7,8- dihydrobiopterin
  Author: s. cameron, s. a. fyffe, w. n. hunter
  Keywords: pterin, enzyme, tautomer, toxoplasma, dehydratase
  
• 2v6u.pdb. lyase 20-jul-07 2v6u Na
  Title: high resolution crystal structure of pterin-4a- carbinolamine dehydratase from toxoplasma gondii
  Author: s. cameron, s. p. goldie, w. n. hunter
  Keywords: pterin, enzyme, toxoplasma, dehydratase
  
• 2v8z.pdb. lyase 16-aug-07 2v8z
  Title: crystal structure of yage, a prophage protein belonging to the dihydrodipicolinic acid synthase family from e. coli k12
  Author: s. manicka, y. peleg, t. unger, s. albeck, o. dym, h. m. greenblatt, g. bourenkov, v. lamzin, s. krishnaswamy, j. l. sussman
  Keywords: n-acetyl neuraminate lyase, nal, lyase, dhdps, prophage
  
• 2v9d.pdb. lyase 23-aug-07 2v9d Se
  Title: crystal structure of yage, a prophage protein belonging to the dihydrodipicolinic acid synthase family from e. coli k12
  Author: s. manicka, y. peleg, t. unger, s. albeck, o. dym, h. m. greenblatt, g. bourenkov, v. lamzin, s. krishnaswamy, j. l. sussman
  Keywords: n-acetyl neuraminate lyase, nal, lyase, dhdps, prophage
  
• 2vc5.pdb. hydrolase 18-sep-07 2vc5 Co Fe
  Title: structural basis for natural lactonase and promiscuous phosphotriesterase activities
  Author: m. elias, j. dupuy, l. merone, l. mandrich, s. moniot, c. lecomte, m. rossi, p. masson, g. manco, e. chabriere
  Keywords: promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase, biotechnology, quorum sensing
  
• 2vc7.pdb. hydrolase 19-sep-07 2vc7 Co Fe
  Title: structural basis for natural lactonase and promiscuous phosphotriesterase activities
  Author: m. elias, j. dupuy, l. merone, l. mandrich, s. moniot, d. rochu, c. lecomte, m. rossi, p. masson, g. manco, e. chabriere
  Keywords: promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase, biotechnology, quorum sensing
  
• 2vdc.pdb. oxidoreductase 04-oct-07 2vdc Fe (cryo-electron microscopy)
  Title: the 9.5 a resolution structure of glutamate synthase from cryo-electron microscopy and its oligomerization behavior in solution: functional implications.
  Author: m. cottevieille, e. larquet, s. jonic, m. v. petoukhov, g. caprini, s. paravisi, d. i. svergun, m. a. vanoni, n. boisset
  Keywords: iron sulphur flavoprotein, glutamine amidotransferase, glutamate biosynthesis, amino-acid biosynthesis
  
• 2vdt.pdb. transferase 11-oct-07 2vdt Ca
  Title: crystallographic structure of levansucrase from bacillus subtilis mutant s164a
  Author: m. e. ortiz-soto, m. rivera, e. rudino-pinera, c. olvera, a. lopez-munguia
  Keywords: glycosyltransferase, glycoside hydrolase, levan, secreted, transferase, levansucrase
  
• 2vfw.pdb. transferase 05-nov-07 2vfw
  Title: rv1086 native
  Author: j. h. naismith, w. wang, c. dong
  Keywords: cell wall biogenesis/degradation, secreted, cell shape, transferase, prenyltransferase
  
• 2vg0.pdb. transferase 07-nov-07 2vg0
  Title: rv1086 citronelly pyrophosphate complex
  Author: j. h. naismith, w. wang, c. dong
  Keywords: cell wall biogenesis/degradation, secreted, cell shape, transferase, prenyltransferase
  
• 2vg1.pdb. transferase 07-nov-07 2vg1
  Title: rv1086 e,e-farnesyl diphosphate complex
  Author: j. h. naismith, w. wang, c. dong
  Keywords: cell wall biogenesis/degradation, secreted, cell shape, transferase, prenyltransferase
  
• 2vg2.pdb. transferase 07-nov-07 2vg2 Cl
  Title: rv2361 with ipp
  Author: j. h. naismith, w. wang, c. dong
  Keywords: cell cycle, cell shape, transferase, cell division, prenyl transferase, peptidoglycan synthesis
  
• 2vg3.pdb. transferase 08-nov-07 2vg3 Cl Mg
  Title: rv2361 with citronellyl pyrophosphate
  Author: j. h. naismith, w. wang, c. dong
  Keywords: cell cycle, cell shape, transferase, cell division, prenyl transferase, peptidoglycan synthesis
  
• 2vg4.pdb. transferase 08-nov-07 2vg4 He Hg
  Title: rv2361 native
  Author: j. h. naismith, w. wang, c. dong
  Keywords: peptidoglycan synthesis, cell wall biogenesis/degradation, cell cycle, cell shape, transferase, cell division
  
• 2vja.pdb. hydrolase 09-dec-07 2vja Cl
  Title: torpedo californica acetylcholinesterase in complex with a non hydrolysable substrate analogue, 4-oxo-n,n,n- trimethylpentanaminium - orthorhombic space group - dataset a at 100k
  Author: j. -p. colletier, d. bourgeois, d. fournier, i. silman, j. l. sussman, m. weik
  Keywords: hydrolase, gpi-anchor
  
• 2vjb.pdb. hydrolase 09-dec-07 2vjb Cl
  Title: torpedo californica acetylcholinesterase in complex with a non hydrolysable substrate analogue, 4-oxo-n,n,n- trimethylpentanaminium - orthorhombic space group - dataset d at 100k
  Author: j. -p. colletier, d. bourgeois, d. fournier, i. silman, j. l. sussman, m. weik
  Keywords: hydrolase, gpi-anchor
  
• 2vjc.pdb. hydrolase 09-dec-07 2vjc Cl
  Title: torpedo californica acetylcholinesterase in complex with a non hydrolysable substrate analogue, 4-oxo-n,n,n- trimethylpentanaminium - orthorhombic space group - dataset a at 150k
  Author: j. -p. colletier, d. bourgeois, d. fournier, i. silman, j. l. sussman, m. weik
  Keywords: hydrolase, gpi-anchor
  
• 2vjd.pdb. hydrolase 09-dec-07 2vjd Cl
  Title: torpedo californica acetylcholinesterase in complex with a non hydrolysable substrate analogue, 4-oxo-n,n,n- trimethylpentanaminium - orthorhombic space group - dataset c at 150k
  Author: j. -p. colletier, d. bourgeois, d. fournier, i. silman, j. l. sussman, m. weik
  Keywords: hydrolase, gpi-anchor
  
• 2vmk.pdb. hydrolase 28-jan-08 2vmk Zn
  Title: crystal structure of e. coli rnase e apoprotein - catalytic domain
  Author: d. j. koslover, a. j. callaghan, m. j. marcaida, m. martick, w. g. scott, b. f. luisi
  Keywords: hydrolase, cytoplasm, rna-binding, rna turnover, endonuclease, rna processing
  
• 2vqv.pdb. hydrolase 19-mar-08 2vqv K Zn
  Title: structure of hdac4 catalytic domain with a gain-of-function mutation bound to a hydroxamic acid inhibitor
  Author: m. j. bottomley, p. lo surdo, p. di giovine, a. cirillo, r. scarpelli, f. ferrigno, p. jones, p. neddermann, r. de francesco, c. steinkuhler, p. gallinari, a. carfi
  Keywords: hydrolase, cytoplasm
  
• 2vrt.pdb. hydrolase 14-apr-08 2vrt Zn
  Title: crystal structure of e. coli rnase e possessing m1 rna fragments - catalytic domain
  Author: d. j. koslover, a. j. callaghan, m. j. marcaida, e. f. garman, m. martick, w. g. scott, b. f. luisi
  Keywords: m1 rna, rnase p, nuclease, hydrolase, cytoplasm, rna-binding, rna turnover, endonuclease
  
• 2vsa.pdb. toxin 22-apr-08 2vsa
  Title: structure and mode of action of a mosquitocidal holotoxin
  Author: n. treiber, d. j. reinert, i. carpusca, k. aktories, g. e. schulz
  Keywords: adp-ribosyltransferase, lectin, ricin-b-like domain
  
• 2vse.pdb. toxin 22-apr-08 2vse
  Title: structure and mode of action of a mosquitocidal holotoxin
  Author: n. treiber, d. j. reinert, i. carpusca, k. aktories, g. e. schulz
  Keywords: adp-ribosyltransferase, toxin, lectin, ricin-b-like domain
  
• 2vt5.pdb. hydrolase 09-may-08 2vt5
  Title: fructose-1,6-bisphosphatase(d-fructose-1,6-bisphosphate -1-phosphohydrolase) (e.c.3.1.3.11) complexed with a dual binding amp site inhibitor
  Author: a. ruf, c. joseph, j. benz, b. fol, t. tetaz
  Keywords: disease mutation, allosteric enzyme, zinc, hydrolase, polymorphism, gluconeogenesis, carbohydrate metabolism
  
• 2vt6.pdb. hydrolase 09-may-08 2vt6 Cl
  Title: native torpedo californica acetylcholinesterase collected with a cumulated dose of 9400000 gy
  Author: j. p. colletier, d. bourgeois, b. sanson, d. fournier, j. l. sussman, i. silman, m. weik
  Keywords: alternative splicing, native torpedo californica acetylcholinesterase, neurotransmitter degradation, lipoprotein, glycoprotein, cell junction, synapse, membrane, hydrolase, gpi-anchor
  
• 2vt7.pdb. hydrolase 09-may-08 2vt7 Cl
  Title: native torpedo californica acetylcholinesterase collected with a cumulated dose of 800000 gy
  Author: j. p. colletier, d. bourgeois, b. sanson, d. fournier, j. l. sussman, i. silman, m. weik
  Keywords: alternative splicing, native torpedo californica acetylcholinesterase, neurotransmitter degradation, lipoprotein, glycoprotein, cell junction, synapse, membrane, hydrolase, gpi-anchor
  
• 2vuk.pdb. transcription 26-may-08 2vuk Zn
  Title: structure of the p53 core domain mutant y220c bound to the stabilizing small-molecule drug phikan083
  Author: a. c. joerger, f. m. boeckler, a. r. fersht
  Keywords: glycoprotein
  
• 2vwj.pdb. dna replication 25-jun-08 2vwj K
  Title: uracil recognition in archaeal dna polymerases captured by x-ray crystallography.
  Author: s. j. firbank, j. wardle, p. heslop, r. j. lewis, b. a. connolly
  Keywords: multifunctional enzyme, nucleotidyltransferase, dna-directed dna polymerase, transferase, exonuclease, dna-binding, dna polymerase, uracil, archaea, nuclease, hydrolase, dna repair
  
• 2vwk.pdb. dna replication 26-jun-08 2vwk Na
  Title: uracil recognition in archaeal dna polymerases captured by x-ray crystallography. v93q polymerase variant
  Author: s. j. firbank, j. wardle, p. heslop, r. j. lewis, b. a. connolly
  Keywords: multifunctional enzyme, nucleotidyltransferase, dna-directed dna polymerase, transferase, exonuclease, dna-binding, dna polymerase, uracil, archaea, nuclease, hydrolase, dna repair
  
• 2z6m.pdb. oxidoreductase 04-aug-07 2z6m Zn Ca
  Title: crystal structure of human ferritin h8 as biotemplate for noble metal nanoparticle synthesis
  Author: l. di costanzo, d. w. christianson
  Keywords: iron, iron storage, metal-binding, oxidoreductase, phosphorylation
  
• 2z6x.pdb. fluorescent protein 09-aug-07 2z6x
  Title: crystal structure of 22g, the wild-type protein of the photoswitchable gfp-like protein dronpa
  Author: a. kikuchi, j. jeyakanthan, j. taka, y. shiro, h. mizuno, a. miyawaki
  Keywords: dronpa, fluorescent protein
  
• 2z6y.pdb. fluorescent protein 09-aug-07 2z6y
  Title: crystal structure of a photoswitchable gfp-like protein dronpa in the bright-state
  Author: a. kikuchi, j. jeyakanthan, j. taka, y. shiro, h. mizuno, a. miyawaki
  Keywords: photochromism, fluorescent protein
  
• 2z6z.pdb. fluorescent protein 09-aug-07 2z6z
  Title: crystal structure of a photoswitchable gfp-like protein dronpa in the bright-state
  Author: a. kikuchi, j. jeyakanthan, j. taka, y. shiro, h. mizuno, a. miyawaki
  Keywords: photochromism, fluorescent protein
  
• 2z91.pdb. immune system 14-sep-07 2z91
  Title: crystal structure of the fab fragment of anti-ciguatoxin antibody 10c9
  Author: m. ui, y. tanaka, k. tsumoto
  Keywords: immune system
  
• 2z92.pdb. immune system 14-sep-07 2z92
  Title: crystal structure of the fab fragment of anti-ciguatoxin antibody 10c9 in complex with ctx3c_abcde
  Author: m. ui, y. tanaka, k. tsumoto
  Keywords: immune system
  
• 2z93.pdb. immune system 14-sep-07 2z93
  Title: crystal structure of fab fragment of anti-ciguatoxin antibody 10c9 in complex with ctx3c-abcd
  Author: m. ui, y. tanaka, k. tsumoto
  Keywords: immune system
  
• 2zci.pdb. signaling protein, lyase 09-nov-07 2zci
  Title: structure of a gtp-dependent bacterial pep-carboxykinase from corynebacterium glutamicum
  Author: s. aich, l. prasad, l. t. j. delbaere
  Keywords: carboxykinase, signaling protein, lyase
  
• 2zg6.pdb. hydrolase 18-jan-08 2zg6 Se
  Title: crystal structure of hypothetical protein; probable 2- haloalkanoic acid dehalogenase from sulfolobus tokodaii
  Author: b. padmanabhan, y. bessho, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsg...
  
• 2zgi.pdb. lyase 22-jan-08 2zgi Se
  Title: crystal structure of putative 4-amino-4-deoxychorismate lyase
  Author: b. padmanabhan, y. bessho, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: plp cofactor, pyridoxal enzyme, lyase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2zi0.pdb. gene regulation/rna 12-feb-08 2zi0 Se
  Title: crystal structure of tav2b/sirna complex
  Author: y. a. yuan, h. -y. chen
  Keywords: coiled coil, nucleus, suppressor of rna silencing, gene regulation/rna complex
  
• 2zl5.pdb. viral protein 02-apr-08 2zl5 Mg Ca
  Title: atomic resolution structural characterization of recognition of histo-blood group antigen by norwalk virus
  Author: j. m. choi, a. m. huston, m. k. estes, b. v. v. prasad
  Keywords: norwalk virus, hbga, histo-blood group antigen, vp1, carbohydrate, p-domain, viral protein
  
• 2zl6.pdb. viral protein 02-apr-08 2zl6 Mg
  Title: atomic resolution structural characterization of recognition of histo-blood group antigens by norwalk virus
  Author: j. m. choi, a. m. huston, m. k. estes, b. v. v. prasad
  Keywords: norwalk virus, hbga, histo-blood group antigen, carbohydrate, vp1, p-domain, viral protein
  
• 2zl7.pdb. viral protein 02-apr-08 2zl7 Mg Ca
  Title: atomic resolution structural characterization of recognition of histo-blood group antigens by norwalk virus
  Author: j. m. choi, a. m. huston, m. k. estes, b. v. v. prasad
  Keywords: norwalk virus, hbga, histo-blood group antigen, carbohydrate, vp1, p-domain, viral protein
  
• 2zp6.pdb. hormone 27-jun-08 2zp6 Zn
  Title: crystal structure of bovine insulin (hexameric form)
  Author: s. m. jaimohan, m. d. naresh, a. b. mandal
  Keywords: carbohydrate metabolism, cleavage on pair of basic residues, glucose metabolism, hormone, secreted
  
• 3b3i.pdb. immune system 22-oct-07 3b3i
  Title: citrullination-dependent differential presentation of a self-peptide by hla-b27 subtypes
  Author: a. beltrami, m. rossmann, m. t. fiorillo, f. paladini, r. sorrentino, w. saenger, p. kumar, a. ziegler, b. uchanska-ziegler
  Keywords: pyrrolidone carboxylic acid, secreted, alternative splicing, g-protein coupled receptor, phosphorylation, receptor, transducer, protein binding, immune system
  
• 3b6s.pdb. immune system 29-oct-07 3b6s
  Title: crystal structure of hla-b*2705 complexed with the citrullinated vasoactive intestinal peptide type 1 receptor (vipr) peptide (residues 400-408)
  Author: a. beltrami, m. rossmann, m. t. fiorillo, r. sorrentino, w. saenger, a. ziegler, a. uchanska-ziegler
  Keywords: immunoglobulin domain, pyrrolidone carboxylic acid, secreted, immune system
  
• 3b8k.pdb. transferase 01-nov-07 3b8k (cryo-electron microscopy)
  Title: structure of the truncated human dihydrolipoyl acetyltransferase (e2)
  Author: x. yu, y. hiromasa, h. tsen, j. k. stoops, t. e. roche, z. h. zhou
  Keywords: transferase
  
• 3b8y.pdb. lyase 02-nov-07 3b8y Zn Ca
  Title: crystal structure of pectate lyase peli from erwinia chrysanthemi in complex with tetragalacturonic acid
  Author: c. creze, s. castang, e. derivery, r. haser, v. shevchik, p. gouet
  Keywords: pectin, galacturonic acid, erwinia chrysanthemi, right-handed parallel beta helix fold
  
• 3b8z.pdb. hydrolase 02-nov-07 3b8z F Zn Ca
  Title: high resolution crystal structure of the catalytic domain of adamts-5 (aggrecanase-2)
  Author: h. -s. shieh, j. m. williams, k. j. mathis, m. d. tortorella, a. tomasselli
  Keywords: hydrolase
  
• 3b90.pdb. lyase 02-nov-07 3b90 Zn Ca
  Title: crystal structure of the catalytic domain of pectate lyase peli from erwinia chrysanthemi
  Author: c. creze, s. castang, e. derivery, r. haser, v. shevchik, p. gouet
  Keywords: pectin, galacturonic acid, erwinia chrysanthemi, right-handed parallel beta helix fold, catalytic domain
  
• 3bcg.pdb. transcription regulator 12-nov-07 3bcg
  Title: conformational changes of the acrr regulator reveal a mechanism of induction
  Author: r. gu, m. li, c. c. su, f. long, f. yang, g. mcdermott, e. y. yu
  Keywords: dna-binding, repressor, transcription, transcription regulation, dna binding protein, transcription regulator
  
• 3bie.pdb. oxidoreductase/dna 30-nov-07 3bie Mn
  Title: x-ray structure of e coli alkb bound to dsdna containing 1mea/t with mn and 2kg
  Author: c. yi, c. -g. yang
  Keywords: protein dna interaction, cross-linking, alkylation repair, oxidoreductase/dna complex
  
• 3biy.pdb. transferase 02-dec-07 3biy Br
  Title: crystal structure of p300 histone acetyltransferase domain in complex with a bisubstrate inhibitor, lys-coa
  Author: x. liu, l. wang, k. zhao, p. r. thompson, y. hwang, r. marmorstein, p. a. cole
  Keywords: bisubstrate inhibitor, protein-inhibitor complex, transferase
  
• 3bkd.pdb. viral protein, membrane protein 06-dec-07 3bkd Cl Se
  Title: high resolution crystal structure of transmembrane domain of m2 protein
  Author: a. l. stouffer, r. acharya, d. salom
  Keywords: m2tm, influenza a virus m2 protein, viral protein, membrane protein
  
• 3bkh.pdb. hydrolase 06-dec-07 3bkh Ni Se
  Title: crystal structure of the bacteriophage phikz lytic transglycosylase, gp144
  Author: a. fokine, k. a. miroshnikov, m. m. shneider, v. v. mesyanzhinov, m. g. rossmann
  Keywords: bacteriophage, phikz, endolysin, peptidoglycan, cell wall degradation, lysozyme, hydrolase
  
• 3bkv.pdb. hydrolase 07-dec-07 3bkv Ni Se
  Title: x-ray structure of the bacteriophage phikz lytic transglycosylase, gp144, in complex with chitotetraose, (nag)4
  Author: a. fokine, k. a. miroshnikov, m. m. shneider, v. v. mesyanzhinov, m. g. rossmann
  Keywords: phikz, gp144, transglycosylase, peptidoglycan, cell wall degradation, lysozyme, transferase, hydrolase
  
• 3bkz.pdb. dna repair,oxidoreductase/dna 09-dec-07 3bkz Mn
  Title: x-ray structure of e coli alkb crosslinked to dsdna in the active site
  Author: c. yi, c. -g. yang, c. he
  Keywords: protein dna interaction, cross-linking, dioxygenase, dna repair, oxidoreductase/dna complex
  
• 3bl5.pdb. hydrolase 10-dec-07 3bl5 Mg Zn
  Title: crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis
  Author: n. cicmil, r. h. huang
  Keywords: rna modification, trna, hydrolase, queuosine biosynthesis
  
• 3bss.pdb. transferase 26-dec-07 3bss
  Title: pgld from campylobacter jejuni, nctc 11168, with native substrate
  Author: n. b. olivier, b. imperiali
  Keywords: hexapeptide repeat, udp, acetyl coenzyme z, rossman fold, bacillosamine, campylobacter, pgl, n-linked glycosylation, transferase
  
• 3bsu.pdb. hydrolase/rna/dna 26-dec-07 3bsu Mg I
  Title: hybrid-binding domain of human rnase h1 in complex with 12- mer rna/dna
  Author: m. nowotny, s. m. cerritelli, r. ghirlando, s. a. gaidamakov, r. j. crouch, w. yang
  Keywords: rna/dna hybrid, dsrna, hydrolase/rna/dna complex
  
• 3bub.pdb. hydrolase 02-jan-08 3bub Zn
  Title: golgi alpha-mannosidase ii with an empty active site
  Author: d. a. kuntz, d. r. rose
  Keywords: glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane
  
• 3bud.pdb. hydrolase 02-jan-08 3bud Zn
  Title: golgi mannosidase ii d204a catalytic nucleophile mutant with an empty active site
  Author: d. a. kuntz, d. r. rose
  Keywords: glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane
  
• 3bui.pdb. hydrolase 02-jan-08 3bui Zn
  Title: golgi mannosidase ii d204a catalytic nucleophile mutant complex with tris
  Author: d. a. kuntz, d. r. rose
  Keywords: glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane
  
• 3bup.pdb. hydrolase 03-jan-08 3bup Zn
  Title: golgi alpha-mannosidase ii d341n acid-base catalyst mutant with bound mannose
  Author: d. a. kuntz, d. r. rose
  Keywords: glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane
  
• 3buq.pdb. hydrolase 03-jan-08 3buq Zn
  Title: golgi alpha-mannosidase ii d204a catalytic nucleophile mutant with bound mannose.
  Author: d. a. kuntz, d. r. rose
  Keywords: glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane
  
• 3bvt.pdb. hydrolase 07-jan-08 3bvt Zn
  Title: golgi mannosidase ii d204a catalytic nucleophile mutant complex with methyl (alpha-d-mannopyranosyl)-(1->3)-s- alpha-d-mannopyranoside
  Author: d. a. kuntz, d. r. rose
  Keywords: glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane
  
• 3bvu.pdb. hydrolase 07-jan-08 3bvu Zn
  Title: golgi mannosidase ii d204a catalytic nucleophile mutant complex with methyl(alpha-d-mannopyranosyl)-(1->3)-s- [(alpha-d-mannopyranosyl)-(1->6)]-alpha-d-mannopyranoside
  Author: d. a. kuntz, d. r. rose
  Keywords: glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane
  
• 3bvv.pdb. hydrolase 07-jan-08 3bvv Zn
  Title: golgi mannosidase ii d204a catalytic nucleophile mutant complex with methyl alpha-d-mannopyranosyl-(1->3)-[6-thio- alpha-d-mannopyranosyl-(1->6)]-beta-d-mannopyranoside
  Author: d. a. kuntz, d. r. rose
  Keywords: glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane
  
• 3bvw.pdb. hydrolase 07-jan-08 3bvw Zn
  Title: golgi mannosidase ii d204a catalytic nucleophile mutant complex with methyl (2-deoxy-2-acetamido-beta-d- glucopyranosyl)-(1->2)-alpha-d-mannopyranosyl- (1->3)- [alpha-d-mannopyranosyl-(1->6)-6-thio-alpha-d- mannopyranosyl- (1->6)]-beta-d-mannopyranoside
  Author: d. a. kuntz, d. r. rose
  Keywords: glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane
  
• 3bvx.pdb. hydrolase 07-jan-08 3bvx Zn
  Title: golgi mannosidase ii d204a catalytic nucleophile mutant complex with methyl (2-deoxy-2-acetamido-beta-d- glucopyranosyl)-(1->2)-(alpha-d-mannopyranosyl)- (1->3)- [(alpha-d-mannopyranosyl)-(1->6)-(alpha-d-mannopyranosyl)- (1->6)]-beta-d-mannopyranoside
  Author: d. a. kuntz, d. r. rose
  Keywords: glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane
  
• 3bwi.pdb. hydrolase 09-jan-08 3bwi Zn
  Title: crystal structure of the catalytic domain of botulinum neurotoxin serotype a with an acetate ion bound at the active site
  Author: d. kumaran, r. rawat, s. swaminathan
  Keywords: catalytic domain, endopeptidase, bio-warfare agent, hydrolase, metalloprotease, pharmaceutical, protease, secreted, zinc
  
• 3bwt.pdb. transcription, rna binding protein 10-jan-08 3bwt
  Title: crystal structure of the rna binding domain of puf4 from saccharomyces cerevisiae
  Author: m. t. miller, j. j. higgin, t. m. t. hall
  Keywords: pumilio, rna binding, ho endonuclease, transcription, rna binding protein
  
• 3bx2.pdb. transcription, rna binding protein/rna 11-jan-08 3bx2 Na
  Title: puf4 rna binding domain bound to ho endonuclease rna 3' utr recognition sequence
  Author: m. t. miller, j. j. higgin, t. m. t. hall
  Keywords: pumilio, rna binding, ho endonuclease, transcription, rna binding protein/rna complex
  
• 3bx3.pdb. transcription, rna binding protein/rna 11-jan-08 3bx3
  Title: puf4 t650c/c724r mutant bound to cox17 rna 3' utr recognition sequence
  Author: m. t. miller, j. j. higgin, t. m. t. hall
  Keywords: pumilio, rna binding, ho endonuclease, puf4 t650c c724r mutant, transcription, rna binding protein/rna complex
  
• 3bx9.pdb. fluorescent protein 11-jan-08 3bx9
  Title: monomeric far-red fluorescent protein mkate crystallized at ph 2.0
  Author: s. pletnev, n. pletneva, v. pletnev
  Keywords: e. quadricolor, chromophore structure, ph-induced cis-trans izomerization
  
• 3bxa.pdb. fluorescent protein 12-jan-08 3bxa
  Title: monomeric far-red fluorescent protein mkate crystallized at ph 4.2
  Author: s. pletnev, n. pletneva, v. pletnev
  Keywords: e. quadricolor, chromophore structure, ph-induced cis-trans izomerization
  
• 3bxb.pdb. fluorescent protein 12-jan-08 3bxb
  Title: monomeric far-red fluorescent protein mkate crystallized at ph 7.0
  Author: s. pletnev, n. pletneva, v. pletnev
  Keywords: e. quadricolor, chromophore structure, ph-induced cis-trans izomerization
  
• 3bxc.pdb. fluorescent protein 12-jan-08 3bxc
  Title: monomeric far-red fluorescent protein mkate crystallized at ph 9.0
  Author: s. pletnev, n. pletneva, v. pletnev
  Keywords: e. quadricolor, chromophore structure, ph-induced cis-trans izomerization
  
• 3by4.pdb. cell cycle, hydrolase 15-jan-08 3by4
  Title: structure of ovarian tumor (otu) domain in complex with ubiquitin
  Author: t. e. messick, r. marmorstein
  Keywords: deubiquitinase, cell cycle, hydrolase
  
• 3c0r.pdb. cell cycle, hydrolase 21-jan-08 3c0r Se
  Title: structure of ovarian tumor (otu) domain in complex with ubiquitin
  Author: t. e. messick, r. marmorstein
  Keywords: deubiquitinase, cell cycle, hydrolase
  
• 3c72.pdb. transferase 06-feb-08 3c72 Zn Ca
  Title: engineered rabggtase in complex with a peptidomimetic inhibitor
  Author: z. guo, y. w. wu, k. t. tan, r. s. bon, e. guiu-rozas, c. delon, u. t. nguyen, s. wetzel, s. arndt, r. s. goody, w. blankenfeldt, k. alexandrov, h. waldmann
  Keywords: rab prenylation, metal-binding, prenyltransferase, transferase, zinc, phosphoprotein
  
• 3c7a.pdb. oxidoreductase 07-feb-08 3c7a
  Title: a structural basis for substrate and stereo selectivity in octopine dehydrogenase (odh-nadh)
  Author: s. h. j. smits, a. mueller, l. schmitt, m. k. grieshaber
  Keywords: l) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase
  
• 3c7c.pdb. oxidoreductase 07-feb-08 3c7c
  Title: a structural basis for substrate and stereo selectivity in octopine dehydrogenase (odh-nadh-l-arginine)
  Author: s. h. j. smits, a. mueller, l. schmitt, m. k. grieshaber
  Keywords: l) stereospecific opine dehydrogenase, oxidoreductase
  
• 3c7d.pdb. oxidoreductase 07-feb-08 3c7d
  Title: a structural basis for substrate and stereo selectivity in octopine dehydrogenase (odh-nadh-pyruvate)
  Author: s. h. j. smits, a. mueller, l. schmitt, m. k. grieshaber
  Keywords: l) stereospecific opine dehydrogenase, oxidoreductase
  
• 3c88.pdb. hydrolase 11-feb-08 3c88 Zn Na
  Title: crystal structure of the catalytic domain of botulinum neurotoxin serotype a with inhibitory peptide rrgc
  Author: d. kumaran, s. swaminathan
  Keywords: catalytic domain, endopeptidase, bio-warfare agent, hydrolase, metalloprotease, pharmaceutical, protease, secreted, zinc
  
• 3c89.pdb. hydrolase 11-feb-08 3c89 Zn
  Title: crystal structure of the catalytic domain of botulinum neurotoxin serotype a with inhibitory peptide rrgm
  Author: d. kumaran, s. swaminathan
  Keywords: catalytic domain, endopeptidase, bio-warfare agent, hydrolase, metalloprotease, pharmaceutical, protease, secreted, zinc
  
• 3c8a.pdb. hydrolase 11-feb-08 3c8a Zn
  Title: crystal structure of the catalytic domain of botulinum neurotoxin serotype a with inhibitory peptide rrgl
  Author: d. kumaran, s. swaminathan
  Keywords: catalytic domain, endopeptidase, bio-warfare agent, hydrolase, metalloprotease, pharmaceutical, protease, secreted, zinc
  
• 3c8b.pdb. hydrolase 11-feb-08 3c8b Zn
  Title: crystal structure of the catalytic domain of botulinum neurotoxin serotype a with inhibitory peptide rrgi
  Author: d. kumaran, s. swaminathan
  Keywords: catalytic domain, endopeptidase, bio-warfare agent, hydrolase, metalloprotease, pharmaceutical, protease, secreted, zinc
  
• 3cae.pdb. hydrolase 19-feb-08 3cae
  Title: structure of nnqqny as an insert in t7 endonuclease i
  Author: z. guo, d. eisenberg
  Keywords: amyloid, steric zipper, hydrolase
  
• 3cap.pdb. signaling protein 20-feb-08 3cap
  Title: crystal structure of native opsin: the g protein-coupled receptor rhodopsin in its ligand-free state
  Author: j. h. park, p. scheerer, k. p. hofmann, h. -w. choe, o. p. ernst
  Keywords: photoreceptor protein, sensory transduction, transducer, transmembrane, vision, signaling protein
  
• 3cdu.pdb. transferase 27-feb-08 3cdu Cl
  Title: crystal structure of coxsackievirus b3 rna-dependent rna polymerase (3dpol) in complex with a pyrophosphate
  Author: a. gruez, b. selisko, m. roberts, g. bricogne, c. bussetta, b. canard
  Keywords: rna-dependent rna polymerase, vizier viral enzymes involved in replication, transferase
  
• 3cdw.pdb. transferase/viral protein 27-feb-08 3cdw Cl
  Title: crystal structure of coxsackievirus b3 rna-dependent rna polymerase (3dpol) in complex with protein primer vpg and a pyrophosphate
  Author: a. gruez, b. selisko, m. roberts, g. bricogne, c. bussetta, b. canard
  Keywords: rna-dependent rna polymerase, protein primer, vpg, vizier viral enzymes involved in replication, transferase/viral protein complex
  
• 3cf4.pdb. oxidoreductase 01-mar-08 3cf4 Fe Ni
  Title: structure of the codh component of the m. barkeri acds complex
  Author: w. gong, b. hao, z. wei, d. j. ferguson jr. , t. tallant, j. a. krzycki, m. k. chan
  Keywords: iron-nikel-sulfur, 4fe-ni-4s, oxidoreductase
  
• 3ch5.pdb. transport protein 07-mar-08 3ch5 Mg Zn
  Title: the crystal structure of the rangdp-nup153znf2 complex
  Author: i. r. vetter, n. schrader
  Keywords: transport protein
  
• 3cjq.pdb. transferase/ribosomal protein 13-mar-08 3cjq I
  Title: ribosomal protein l11 methyltransferase (prma) in complex with dimethylated ribosomal protein l11 in space group p212121
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: post- translational modification, multi-specific trimethylation, cytoplasm, ribonucleoprotein, ribosomal protein, rna- binding, rrna-binding, transferase/ribosomal protein complex
  
• 3cjr.pdb. transferase/ribosomal protein 13-mar-08 3cjr
  Title: ribosomal protein l11 methyltransferase (prma) in complex with ribosomal protein l11 (k39a) and inhibitor sinefungin.
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: post- translational modification, multi-specific trimethylation, cytoplasm, ribonucleoprotein, ribosomal protein, rna- binding, rrna-binding, transferase/ribosomal protein complex
  
• 3cjs.pdb. transferase/ribosomal protein 13-mar-08 3cjs
  Title: minimal recognition complex between prma and ribosomal protein l11
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: post- translational modification, multi-specific trimethylation, cytoplasm, ribonucleoprotein, ribosomal protein, rna- binding, rrna-binding, transferase/ribosomal protein complex
  
• 3cjt.pdb. transferase/ribosomal protein 13-mar-08 3cjt Cl
  Title: ribosomal protein l11 methyltransferase (prma) in complex with dimethylated ribosomal protein l11
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: post- translational modification, multi-specific trimethylation, cytoplasm, ribonucleoprotein, ribosomal protein, rna- binding, rrna-binding, transferase/ribosomal protein complex
  
• 3cju.pdb. transferase/ribosomal protein 13-mar-08 3cju Cl I
  Title: ribosomal protein l11 methyltransferase (prma) in complex with trimethylated ribosomal protein l11
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: post- translational modification, multi-specific trimethylation, cytoplasm, ribonucleoprotein, ribosomal protein, rna- binding, rrna-binding, transferase/ribosomal protein complex
  
• 3ck7.pdb. sugar binding protein 14-mar-08 3ck7 Ca
  Title: b. thetaiotaomicron susd with alpha-cyclodextrin
  Author: n. m. koropatkin, e. c. martens, j. i. gordon, t. j. smith
  Keywords: carbohydrate binding, starch binding, sugar binding protein
  
• 3ck8.pdb. sugar binding protein 14-mar-08 3ck8 Ca
  Title: b. thetaiotaomicron susd with beta-cyclodextrin
  Author: n. m. koropatkin, e. c. martens, j. i. gordon, t. j. smith
  Keywords: carbohydrate binding, starch binding, sugar binding protein
  
• 3ck9.pdb. sugar binding protein 14-mar-08 3ck9 Ca
  Title: b. thetaiotaomicron susd with maltoheptaose
  Author: n. m. koropatkin, e. c. martens, j. i. gordon, t. j. smith
  Keywords: carbohydrate binding, starch binding, sugar binding protein
  
• 3ckb.pdb. sugar binding protein 14-mar-08 3ckb Ca
  Title: b. thetaiotaomicron susd with maltotriose
  Author: n. m. koropatkin, e. c. martens, j. i. gordon, t. j. smith
  Keywords: carbohydrate binding, starch binding, sugar binding protein
  
• 3ckc.pdb. sugar binding protein 14-mar-08 3ckc Ca
  Title: b. thetaiotaomicron susd
  Author: n. m. koropatkin, e. c. martens, j. i. gordon, t. j. smith
  Keywords: carbohydrate binding, starch binding, sugar binding protein
  
• 3cmq.pdb. ligase 24-mar-08 3cmq Mg
  Title: crystal structure of human mitochondrial phenylalanine trna synthetase
  Author: l. klipcan
  Keywords: rrm domain, trna, rna recogntion, aminoacyl-trna synthetase, atp-binding, ligase, mitochondrion, nucleotide-binding, protein biosynthesis, transit peptide
  
• 3coq.pdb. transcription/dna 29-mar-08 3coq Zn
  Title: structural basis for dimerization in dna recognition by gal4
  Author: m. hong, m. x. fitzgerald, s. harper, c. luo, d. w. speicher
  Keywords: transcription/dna complex
  
• 3cpm.pdb. hydrolase 31-mar-08 3cpm Zn
  Title: plant peptide deformylase pdf1b crystal structure
  Author: d. w. rodgers, r. l. houtz, l. m. a. dirk, j. j. schmidt, y. cai
  Keywords: chloroplast, hydrolase, iron, metal-binding, plastid, protein biosynthesis, transit peptide
  
• 3cpw.pdb. ribosome 01-apr-08 3cpw Cl Sr Mg F K Na Cd
  Title: the structure of the antibiotic linezolid bound to the large ribosomal subunit of haloarcula marismortui
  Author: j. a. ippolito, z. k. kanyo, d. wang, f. j. franceschi, p. b. moore, t. a. steitz, e. m. duffy
  Keywords: 50s ribosomal subunit, antibiotic complexes, ribonucleoprotein, ribosomal protein, rna-binding, rrna- binding, trna-binding, metal-binding, zinc, zinc-finger, acetylation, ribosome
  
• 3cqz.pdb. transcription 03-apr-08 3cqz Zn
  Title: crystal structure of 10 subunit rna polymerase ii in complex with the inhibitor alpha-amanitin
  Author: c. d. kaplan, k. -m. larsson, r. d. kornberg
  Keywords: transferase, ubl conjugation, zinc, zinc- finger, polymorphism, cytoplasm, dna damage, dna repair
  
• 3cs0.pdb. hydrolase 08-apr-08 3cs0 Se
  Title: crystal structure of degp24
  Author: t. krojer, j. sawa, e. schaefer, h. r. saibil, m. ehrmann, t. clausen
  Keywords: htra, protease, chaperone, pdz, outer membrane protein, omp, periplasm, hydrolase
  
• 3csb.pdb. de novo protein, sugar binding protein 09-apr-08 3csb Mn
  Title: crystal structure of monobody ysx1/maltose binding protein fusion complex
  Author: r. n. gilbreth, s. koide
  Keywords: antibody mimic, synthetic protein interface, minimalist protein interface, de novo protein, sugar binding protein
  
• 3csg.pdb. de novo protein, sugar binding protein 09-apr-08 3csg
  Title: crystal structure of monobody ys1(mbp-74)/maltose binding protein fusion complex
  Author: r. n. gilbreth, s. koide
  Keywords: antibody mimic, synthetic protein interface, minimalist protein interface, de novo protein, sugar binding protein
  
• 3csq.pdb. hydrolase 10-apr-08 3csq Zn
  Title: crystal and cryoem structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail
  Author: y. xiang, m. g. rossmann
  Keywords: infection, phi29, late protein
  
• 3csr.pdb. hydrolase 10-apr-08 3csr
  Title: crystal and cryoem structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail
  Author: y. xiang, m. g. rossmann
  Keywords: hydrolase, cell wall, infection, late protein
  
• 3csz.pdb. hydrolase 10-apr-08 3csz
  Title: crystal and cryoem structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail
  Author: y. xiang, m. g. rossmann
  Keywords: phi29, hydrolase, infection, structure, late protein
  
• 3ct0.pdb. hydrolase 11-apr-08 3ct0
  Title: crystal and cryoem structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail
  Author: y. xiang, m. g. rossmann
  Keywords: phi29, hydrolase, infection, structure, late protein
  
• 3ct1.pdb. hydrolase 11-apr-08 3ct1
  Title: crystal and cryoem structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail
  Author: y. xiang, m. g. rossmann
  Keywords: phi29, hydrolase, infection, structure, late protein
  
• 3ct5.pdb. hydrolase 11-apr-08 3ct5
  Title: crystal and cryoem structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail
  Author: y. xiang, m. g. rossmann
  Keywords: phi29, hydrolase, infection, structure, late protein
  
• 3cuk.pdb. oxidoreductase 16-apr-08 3cuk
  Title: crystal structure of human d-amino acid oxidase: bound to an inhibitor
  Author: s. prasad, s. munshi
  Keywords: alpha-beta-alpha motif, flavin containing proteinalpha-beta-alpha motif, flavin containing protein, fad, flavoprotein, peroxisome
  
• 3cy6.pdb. unknown function 25-apr-08 3cy6
  Title: crystal structure of e18q dj-1
  Author: a. c. witt, m. lakshminarasimhan, b. c. remington, s. hasim, e. pozharski, m. a. wilson
  Keywords: chaperone, cytoplasm, nucleus, oncogene, oxidation, parkinson disease, unknown function
  
• 3cyf.pdb. unknown function 25-apr-08 3cyf
  Title: crystal structure of e18n dj-1
  Author: a. c. witt, m. lakshminarasimhan, b. c. remington, s. hasim, e. pozharski, m. a. wilson
  Keywords: chaperone, cytoplasm, nucleus, oncogene, oxidation, parkinson disease, unknown function
  
• 3cz9.pdb. unknown function 28-apr-08 3cz9
  Title: crystal structure of e18l dj-1
  Author: a. c. witt, m. lakshminarasimhan, b. c. remington, s. hasim, e. pozharski, m. a. wilson
  Keywords: chaperone, cytoplasm, nucleus, oncogene, oxidation, parkinson disease, unknown function
  
• 3cza.pdb. unknown function 28-apr-08 3cza
  Title: crystal structure of e18d dj-1
  Author: a. c. witt, m. lakshminarasimhan, b. c. remington, s. hashim, e. pozharski, m. a. wilson
  Keywords: chaperone, cytoplasm, nucleus, oncogene, oxidation, parkinson disease, unknown function
  
• 3d2g.pdb. ribonucleic acid 08-may-08 3d2g Mg
  Title: structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
  Author: s. thore
  Keywords: riboswitch, tpp, thiamine analogues, antibiotics, arabidopsis thaliana, eukaryote, structure
  
• 3d2v.pdb. ribonucleic acid 09-may-08 3d2v Mg
  Title: structure of the eukaryotic tpp-specific riboswitch bound to the antibacterial compound pyrithiamine pyrophosphate
  Author: s. thore, c. frick, n. ban
  Keywords: riboswitch, antibiotic, structure, thiamine pyrophosphate, pyrithiamine pyrophosphate, complex
  
• 3d2x.pdb. ribonucleic acid 09-may-08 3d2x Mg
  Title: structure of the thiamine pyrophosphate-specific riboswitch bound to oxythiamine pyrophosphate
  Author: s. thore, c. frick, n. ban
  Keywords: structure, riboswitch, thiamine pyrophosphate, oxythiamine pyrophosphate, antibiotic, drugs, complex
  
• 3d3e.pdb. oxidoreductase 09-may-08 3d3e F
  Title: crystal structure of human 11-beta-hydroxysteroid dehydrogenase (hsd1) in complex with benzamide inhibitor
  Author: z. wang, a. sudom, j. liu, n. p. walker
  Keywords: 11beta, hydroxysteroid, dehydrogenase, endoplasmic reticulum, glycoprotein, lipid metabolism, membrane, microsome, nadp, polymorphism, signal-anchor, steroid metabolism, transmembrane
  
• 3d3h.pdb. transferase 11-may-08 3d3h
  Title: crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a
  Author: y. yuan, p. sliz, s. walker
  Keywords: multifunctional enzyme, peptidoglycan synthesis, signal- anchor, transmembrane
  
• 3d4n.pdb. oxidoreductase 14-may-08 3d4n F
  Title: crystal structure of human 11-beta-hydroxysteroid dehydrogenase (hsd1) in complex with sulfonamide inhibitor
  Author: z. wang, j. liu, a. sudom, n. p. walker
  Keywords: 11beta, hydroxysteroid, dehydrogenase, endoplasmic reticulum, glycoprotein, lipid metabolism, membrane, microsome, nadp, polymorphism, signal-anchor, steroid metabolism, transmembrane
  
• 3d54.pdb. ligase 15-may-08 3d54 Na
  Title: stucture of purlqs from thermotoga maritima
  Author: s. e. ealick, m. morar
  Keywords: atp-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis, glutamine amidotransferase, ligase/unknown function complex
  
• 3d7l.pdb. structural genomics, unknown function 21-may-08 3d7l Se
  Title: the crystal structure of the protein lin1944 from listeria innocua .
  Author: k. tan, l. bigelow, m. gu, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: lin1944, listeria innocua, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
  
• 3d7z.pdb. transferase 22-may-08 3d7z
  Title: crystal structure of p38 kinase in complex with a biphenyl amide inhibitor
  Author: d. o. somers, s. patel
  Keywords: serine/threonine protein kinase, map kinase, alternative splicing, atp-binding, cytoplasm, nucleotide- binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3d83.pdb. transferase 22-may-08 3d83
  Title: crystal structure of p38 kinase in complex with a biphenyl amide inhibitor
  Author: d. o. somers
  Keywords: serine/threonine protein kinase, map kinase, alternative splicing, atp-binding, cytoplasm, nucleotide- binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3d8u.pdb. transcription regulator 23-may-08 3d8u Se
  Title: the crystal structure of a purr family transcriptional regulator from vibrio parahaemolyticus rimd 2210633
  Author: k. tan, c. hatzos, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: transcription, transcription regulation, transcription regulator
  
• 3d95.pdb. transport protein 26-may-08 3d95
  Title: crystal structure of the r132k:y134f:r111l:l121e:t54v mutant of apo-cellular retinoic acid binding protein type ii at 1.20 angstroms resolution
  Author: s. vaezeslami, j. h. geiger
  Keywords: retinoic acid, retinoids, beta barrel, crystallography, x-ray, high resolution, mutant, cytoplasm, nucleus, retinol-binding, transport, vitamin a, transport protein
  
• 3d96.pdb. transport protein 26-may-08 3d96
  Title: crystal structure of the r132k:y134f mutant of apo-cellular retinoic acid binding protein type ii at 1.71 angstroms resolution
  Author: s. vaezeslami, j. h. geiger
  Keywords: retinoic acid, retinoids, beta barrel, crystallography, x-ray, high resolution, mutant, cytoplasm, nucleus, retinol-binding, transport, vitamin a, transport protein
  
• 3d97.pdb. transport protein 26-may-08 3d97 Na
  Title: crystal structure of the r132k:r111l:l121e mutant of apo- cellular retinoic acid binding protein type ii at 1.50 angstroms resolution
  Author: s. vaezeslami, j. h. geiger
  Keywords: retinoic acid, retinoids, beta barrel, crystallography, x-ray, high resolution, mutant, cytoplasm, nucleus, retinol-binding, transport, vitamin a, transport protein
  
• 3dc2.pdb. oxidoreductase 03-jun-08 3dc2
  Title: crystal structure of serine bound d-3-phosphoglycerate dehydrogenase from mycobacterium tuberculosis
  Author: s. dey, j. c. sacchettini
  Keywords: phosphoglycerate dehydrogenase, serine biosynthesis, amino-acid biosynthesis, nad
  
• 3ddn.pdb. oxidoreductase 05-jun-08 3ddn
  Title: crystal structure of hydroxypyruvic acid phosphate bound d- 3-phosphoglycerate dehydrogenase in mycobacterium tuberculosis
  Author: s. dey, j. c. sacchettini
  Keywords: phosphoglycerate dehydrogenase, serine biosynthesis, amino-acid biosynthesis, nad
  
• 3ddp.pdb. transferase/cell cycle 06-jun-08 3ddp
  Title: structure of phosphorylated thr160 cdk2/cyclin a in complex with the inhibitor cr8
  Author: a. echalier, j. a. endicott
  Keywords: atp- binding, cell division, mitosis, nucleotide-binding, phosphoprotein, polymorphism, serine/threonine-protein kinase, cyclin, cytoplasm, nucleus, transferase/cell cycle complex
  
• 3ddq.pdb. transferase/cell cycle 06-jun-08 3ddq
  Title: structure of phosphorylated thr160 cdk2/cyclin a in complex with the inhibitor roscovitine
  Author: a. echalier, j. a. endicott
  Keywords: atp-binding, cell cycle, cell division, kinase, mitosis, nucleotide-binding, phosphoprotein, polymorphism, serine/threonine-protein kinase, cyclin, cytoplasm, nucleus, transferase/cell cycle complex
  
• 3dff.pdb. hydrolase 11-jun-08 3dff Zn Se
  Title: crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin
  Author: y. zou, j. s. brunzelle, s. k. nair
  Keywords: lipoglycopeptide, pseudoaglycone, zinc dependent, hydrolase
  
• 3dfi.pdb. hydrolase 12-jun-08 3dfi Zn
  Title: crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin
  Author: y. zou, j. s. brunzelle, s. k. nair
  Keywords: hydrolase
  
• 3dfk.pdb. hydrolase 12-jun-08 3dfk Zn Se
  Title: crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin
  Author: y. zou, j. s. brunzelle, s. k. nair
  Keywords: alpha-beta single domain, hydrolase
  
• 3dfm.pdb. hydrolase 12-jun-08 3dfm Zn Se
  Title: crystal structures of lipoglycopeptide antibiotic deacetylases: implications for the biosynthesis of a40926 and teicoplanin
  Author: y. zou, j. s. brunzelle, s. k. nair
  Keywords: alpha-beta single domain, hydrolase
  
• 3dgd.pdb. ligand binding protein 13-jun-08 3dgd Zn
  Title: crystal structure of the f87m/l110m mutant of human transthyretin at ph 4.6
  Author: l. c. palmieri, j. b. b. freire, d. foguel, l. m. t. r. lima
  Keywords: monomer, amyloidogenic intermediate, acidic ph, thyroid hormone binding protein, ligand binding protein
  
• 3dgs.pdb. viral protein 16-jun-08 3dgs
  Title: changing the determinants of protein stability from covalent to non-covalent interactions by in-vitro evolution: a structural and energetic analysis
  Author: r. p. jakob, i. kather, h. dobbek, f. x. schmid
  Keywords: dissulfide bonds, evolutionary protein design, phage gene-3-protein, phage display, capsid protein, phage recognition, virion, viral protein
  
• 3dgv.pdb. hydrolase 16-jun-08 3dgv Zn
  Title: crystal structure of thrombin activatable fibrinolysis inhibitor (tafi)
  Author: k. anand, i. pallares, z. valnickova, t. christensen, h. schreuder, j. enghild
  Keywords: fibrinolysis, carboxypeptidase, protein stability, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secreted, zinc, zymogen
  
• 3did.pdb. ligand binding protein 20-jun-08 3did Zn
  Title: crystal structure of the f87m/l110m mutant of human transthyretin at ph 4.6 soaked
  Author: l. c. palmieri, j. b. b. freire, d. foguel, l. m. t. r. lima
  Keywords: monomer, amyloidogenic intermediate, acidic ph, thyroid hormone binding protein, ligand binding protein
  
• 3djd.pdb. oxidoreductase 23-jun-08 3djd Se
  Title: structural study of a deglycating enzyme
  Author: f. collard, j. zhang, i. nemet, k. r. qanungo, v. m. monnier, v. c. yee
  Keywords: amadoriase, deglycation, oxidoreductase
  
• 3dje.pdb. oxidoreductase 23-jun-08 3dje Se
  Title: structural study of a deglycating enzyme
  Author: f. collard, j. zhang, i. nemet, k. r. qanungo, v. m. monnier, v. c. yee
  Keywords: amadoriase, deglycation, oxidoreductase
  
• 3dob.pdb. protein binding 03-jul-08 3dob
  Title: peptide-binding domain of heat shock 70 kda protein f44e5.5 from c.elegans.
  Author: j. osipiuk, c. hatzos, m. gu, r. zhang, c. voisine, r. i. morimoto, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: apc90015.11, peptide-binding domain, hsp70, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, atp-binding, nucleotide- binding, protein binding
  
• 3dqg.pdb. chaperone 09-jul-08 3dqg
  Title: peptide-binding domain of heat shock 70 kda protein f, mitochondrial precursor, from caenorhabditis elegans.
  Author: j. osipiuk, r. mulligan, m. gu, c. voisine, r. i. morimoto, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: transit peptide, chaperone
  
• 3dqq.pdb. structural genomics, unknown function 09-jul-08 3dqq
  Title: the crystal structure of the putative trna synthase from salmonella typhimurium lt2
  Author: r. zhang, m. gu, m. zhou, w. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
  Keywords: salmonella typhimurium, structural genomics, csgid, unknown function