Recent PDB releases or updates: week of 18 April 2008

• 2bvr.pdb. hydrolase 04-jul-05 2bvr Cl
  Title: human thrombin complexed with fragment-based small molecules occupying the s1 pocket
  Author: t. neumann, h. -d. junker, o. keil, k. burkert, h. ottleben, j. gamer, r. sekul, h. deppe, a. feurer, d. tomandl, g. metz
  Keywords: serine protease, coagulation
  
• 2bvu.pdb. structural protein 04-jul-05 2bvu
  Title: d83r mutant of asaris suum major sperm protein (msp)
  Author: m. stewart, r. p. grant, t. m. roberts
  Keywords: major sperm protein, structural protein
  
• 2e86.pdb. oxidoreductase 19-jan-07 2e86 Cu
  Title: azide bound to copper containing nitrite reductase from a. faecalis s-6
  Author: e. i. tocheva, m. e. p. murphy
  Keywords: copper, x-ray crystallography, azide, inhibitor, kinetic studies, oxidoreductase
  
• 2fr4.pdb. immune system/dna 18-jan-06 2fr4
  Title: structure of fab dna-1 complexed with a stem-loop dna ligand
  Author: j. j. tanner, z. ou
  Keywords: fab, immunoglobulin, anti-dna, anti-ssdna, autoantibody, stem-loop dna
  
• 2h3h.pdb. sugar binding protein 22-may-06 2h3h
  Title: crystal structure of the liganded form of thermotoga maritima glucose binding protein
  Author: a. changela, y. tian
  Keywords: periplasmic binding protein, gbp
  
• 2hnl.pdb. transferase 13-jul-06 2hnl
  Title: structure of the prostaglandin d synthase from the parasitic nematode onchocerca volvulus
  Author: m. perbandt, j. hoppner, c. betzel, e. liebau
  Keywords: glutathione s-transferase, river blindness, onchocerca volvulus, immune modulation
  
• 2ioy.pdb. sugar binding protein 11-oct-06 2ioy
  Title: crystal structure of thermoanaerobacter tengcongensis ribose binding protein
  Author: m. j. cuneo, h. w. hellinga
  Keywords: sugar binding protein, thermophilic proteins
  
• 2j4q.pdb. hydrolase 05-sep-06 2j4q Mg
  Title: crystal structure of a e138a escherichia coli dctp deaminase mutant enzyme in complex with dttp
  Author: e. johansson, m. thymark, j. h. bynck, m. fanoe, s. larsen, m. willemoes
  Keywords: trimer, hydrolase, dctp deaminase
  
• 2j7u.pdb. viral protein 17-oct-06 2j7u Cl Mg Zn
  Title: dengue virus ns5 rna dependent rna polymerase domain
  Author: t. l. yap, t. xu, y. l. chen, h. malet, m. p. egloff, b. canard, s. g. vasudevan, j. lescar
  Keywords: rna-dependent rna polymerase, dengue, flavivirus, high-throughput assay, viral protein
  
• 2j8w.pdb. electron transport 30-oct-06 2j8w Fe
  Title: the crystal structure of cytochrome c' from rubrivivax gelatinosus at 1.3 a resolution and ph 8.0
  Author: s. benini, s. ciurli, w. r. rypniewski, k. s. wilson
  Keywords: heme, iron, transport, cytochrome, metal-binding, electron transfer, electron transport, rubrivivax gelatinosus
  
• 2jq6.pdb. metal binding protein 29-may-07 2jq6 He Hg Ca (NMR, 10 structures)
  Title: structure of eh-domain of ehd1
  Author: f. p. kieken, m. jovic, s. caplan, p. l. sorgen
  Keywords: ehd-1, metal binding protein
  
• 2jqc.pdb. toxin 31-may-07 2jqc Hg (NMR, 20 structures)
  Title: a l-amino acid mutant of a d-amino acid containing conopeptide
  Author: f. huang, w. du, y. han, c. wang, c. chi
  Keywords: mr12, nmr solution structure
  
• 2jsv.pdb. immune system 16-jul-07 2jsv He Hg (NMR, 10 structures)
  Title: dipole tensor-based refinement for atomic-resolution structure determination of a nanocrystalline protein by solid-state nmr spectroscopy
  Author: w. franks, b. j. wylie, h. l. frericks, a. j. nieuwkoop, r. mayrhofer, g. j. shah, d. t. graesser, c. m. rienstra
  Keywords: gb1, tensor refinement, cell wall, igg-binding protein, peptidoglycan-anchor, immune system
  
• 2k10.pdb. antimicrobial protein 19-feb-08 2k10 Hg (NMR, 20 structures)
  Title: confirmational analysis of the broad-spectrum antibacterial peptide, rantuerin-2csa: identification of a full length helix-turn-helix motif
  Author: c. m. hewage, a. p. subasinghage, m. conlon
  Keywords: molecular modelling, helix-turn-helix, disulfide bond, antimicrobial peptide, antimicrobial protein
  
• 2k1a.pdb. cell adhesion 25-feb-08 2k1a Hg (NMR, 21 structures)
  Title: bicelle-embedded integrin alpha(iib) transmembrane segment
  Author: t. -l. lau, v. dua, t. s. ulmer
  Keywords: alternative splicing, calcium, cell adhesion, cleavage on pair of basic residues, disease mutation, glycoprotein, integrin, polymorphism, pyrrolidone carboxylic acid, receptor
  
• 2k1c.pdb. viral protein 29-feb-08 2k1c He Hg (NMR, 20 structures)
  Title: nmr structure of the c-terminal domain of hiv-1 capsid in complex with peptide inhibitor
  Author: s. bhattacharya, h. zhang, a. k. debnath, d. cowburn
  Keywords: rna-directed dna polymerase, transferase, viral nucleoprotein, virion, zinc, zinc-finger, viral protein
  
• 2k1j.pdb. gene regulation 05-mar-08 2k1j He Hg Zn (NMR, 25 structures)
  Title: plan homeodomain finger of tumour supressor ing4
  Author: a. palacios, p. garcia, d. padro, e. lopez-hernandez, f. j. blanco
  Keywords: zn, gene regulation, acetylation, alternative splicing, anti-oncogene, cell cycle, coiled coil, metal-binding, nucleus, zinc, zinc-finger
  
• 2k2c.pdb. metal binding protein 31-mar-08 2k2c He Hg Zn (NMR, 15 structures)
  Title: solution nmr structure of n-terminal domain of human pirh2. northeast structural genomics consortium (nesg) target ht2a
  Author: b. wu, a. lemak, y. sheng, m. karra, s. srisailam, m. sunnerhagen, c. h. arrowsmith, northeast structural genomics consortium (nesg)
  Keywords: cytoplasm, metal-binding, nucleus, zinc-finger, metal binding protein, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2k2d.pdb. metal binding protein 31-mar-08 2k2d He Hg Zn (NMR, 15 structures)
  Title: solution nmr structure of c-terminal domain of human pirh2. northeast structural genomics consortium (nesg) target ht2c
  Author: a. lemak, y. sheng, m. karra, s. srisailam, r. laister, s. duan, c. h. arrowsmith, northeast structural genomics consortium (nesg)
  Keywords: cytoplasm, metal-binding, nucleus, zinc-finger, metal binding protein, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2pa8.pdb. transferase 27-mar-07 2pa8 Fe
  Title: x-ray crystal structure of the d/l subcomplex of the sulfolobus solfataricus rna polymerase
  Author: a. hirata, k. s. murakami
  Keywords: platform for rna polymerase assembly, transferase
  
• 2pga.pdb. transferase 09-apr-07 2pga K
  Title: x-ray structure of the uridine phosphorylase from salmonella typhimurium in complex with inhibitor and phosphate and potassium ion at 1.74 a resolution
  Author: v. i. timofeev, a. a. lashkov, a. g. gabdoulkhakov, c. betzel, a. m. mikhailov
  Keywords: transferase
  
• 2ph4.pdb. toxin 10-apr-07 2ph4
  Title: crystal structure of a novel arg49 phospholipase a2 homologue from zhaoermia mangshanensis venom
  Author: m. t. murakami, u. kuch, d. mebs, r. k. arni
  Keywords: arg49, phospholipase a2, myotoxin
  
• 2pnx.pdb. gene regulation 25-apr-07 2pnx Zn
  Title: the phd finger of ing4 in complex with an h3k4me3 histone peptide
  Author: k. s. champagne, k. johnson, t. g. kutateladze
  Keywords: chromatin, zinc finger, histone, gene regulation
  
• 2pqm.pdb. lyase 02-may-07 2pqm
  Title: crystal structure of cysteine synthase (oass) from entamoeba histolytica at 1.86 a resolution
  Author: k. chinthalapudi, n. alam, s. gourinath
  Keywords: cysteine synthase, plp, lyase
  
• 2pqz.pdb. hydrolase 03-may-07 2pqz Cl
  Title: hiv-1 protease in complex with a pyrrolidine-based inhibitor
  Author: j. boettcher, a. blum, a. heine, w. e. diederich, g. klebe
  Keywords: hydrolase
  
• 2pru.pdb. metal binding protein 04-may-07 2pru He Hg (NMR, 20 structures)
  Title: nmr structure of human apos100b at 10c
  Author: s. malik, g. s. shaw, m. revington
  Keywords: calcium binding protein, ef-hand, all alpha helical protein, metal binding protein
  
• 2pu2.pdb. hydrolase 08-may-07 2pu2
  Title: ampc beta-lactamase with bound phthalamide inhibitor
  Author: k. babaoglu, b. k. shoichet
  Keywords: hydrolase
  
• 2pu4.pdb. hydrolase 08-may-07 2pu4
  Title: ampc beta-lacamase with bound covalent oxadiazole inhibitor
  Author: k. babaoglu, b. k. shoichet
  Keywords: hydrolase
  
• 2pwc.pdb. hydrolase 11-may-07 2pwc Cl
  Title: hiv-1 protease in complex with a amino decorated pyrrolidine-based inhibitor
  Author: j. boettcher, a. blum, a. heine, w. e. diederich, g. klebe
  Keywords: hydrolase
  
• 2pwr.pdb. hydrolase 12-may-07 2pwr Cl
  Title: hiv-1 protease in complex with a carbamoyl decorated pyrrolidine-based inhibitor
  Author: b. boettcher, a. blum, a. heine, w. e. diederich, g. klebe
  Keywords: hydrolase
  
• 2q1g.pdb. ligase 24-may-07 2q1g F
  Title: crystal structure of 4-(trifluoromethyldiazirinyl) phenylalanyl-trna synthetase
  Author: w. liu, e. tippmann, p. g. schultz
  Keywords: diazirine, unnatural amino acid, ligase
  
• 2q1i.pdb. ligase 24-may-07 2q1i F
  Title: crystal structure of 4-(trifluoromethyldiazirinyl) phenylalanyl-trna synthetase
  Author: w. liu, e. tippmann, p. g. schultz
  Keywords: diazirine, unnatural amino acid, ligase
  
• 2qbu.pdb. transferase 18-jun-07 2qbu
  Title: crystal structure of methanothermobacter thermautotrophicus cbil
  Author: s. frank, m. j. warren, r. w. pickersgill
  
  
• 2qc6.pdb. transferase 19-jun-07 2qc6 Br
  Title: protein kinase ck2 in complex with dbc
  Author: r. battistutta
  Keywords: dbc, kinase inhibitors, coumarins, transferase
  
• 2qco.pdb. transcription 19-jun-07 2qco
  Title: crystal structure of the transcriptional regulator cmer from campylobacter jejuni
  Author: r. gu, c. su, f. shi, m. li, g. mcdermott, q. zhang, e. w. yu
  
  
• 2qcu.pdb. oxidoreductase 19-jun-07 2qcu
  Title: crystal structure of glycerol-3-phosphate dehydrogenase from escherichia coli
  Author: j. i. yeh, u. chinte, s. du
  Keywords: oxidoreductase
  
• 2qdw.pdb. electron transport 21-jun-07 2qdw Cu
  Title: structure of cu(i) form of the m51a mutant of amicyanin
  Author: j. k. ma, y. wang, c. j. carrell, f. s. mathews, v. l. davidson
  Keywords: cupredoxin, electron transfer, electron transport
  
• 2qkm.pdb. hydrolase 11-jul-07 2qkm
  Title: the crystal structure of fission yeast mrna decapping enzyme dcp1-dcp2 complex
  Author: m. she, h. song
  Keywords: hydrolase
  
• 2qnn.pdb. hydrolase 19-jul-07 2qnn Cl F
  Title: hiv-1 protease in complex with a multiple decorated pyrrolidine-based inhibitor
  Author: j. boettcher, a. blum, a. heine, w. e. diederich, g. klebe
  Keywords: zinc-finger
  
• 2qnp.pdb. hydrolase 19-jul-07 2qnp Cl I
  Title: hiv-1 protease in complex with a iodo decorated pyrrolidine- based inhibitor
  Author: j. boettcher, a. blum, a. heine, w. e. diederich, g. klebe
  Keywords: zinc-finger
  
• 2qnq.pdb. hydrolase 19-jul-07 2qnq Cl
  Title: hiv-1 protease in complex with a chloro decorated pyrrolidine-based inhibitor
  Author: j. boettcher, a. blum, a. heine, w. e. diederich, g. klebe
  Keywords: zinc-finger
  
• 2r45.pdb. oxidoreductase 30-aug-07 2r45
  Title: crystal structure of escherichia coli glycerol-3-phosphate dehydrogenase in complex with 2-phospho-d-glyceric acid
  Author: j. i. yeh, s. du, u. chinte
  Keywords: oxidoreductase
  
• 2r7e.pdb. blood clotting 07-sep-07 2r7e Cu Ca
  Title: crystal structure analysis of coagulation factor viii
  Author: b. l. stoddard, b. w. shen
  Keywords: blood clotting
  
• 2r9w.pdb. hydrolase 13-sep-07 2r9w
  Title: ampc beta-lactamase with bound phthalamide inhibitor
  Author: k. babaoglu, b. k. shoichet
  Keywords: pthalamide, antibiotic resistance, hydrolase, periplasm
  
• 2r9x.pdb. hydrolase 13-sep-07 2r9x
  Title: ampc beta-lactamase with bound phthalamide inhibitor
  Author: k. babaoglu, b. k. shoichet
  Keywords: pthalamide, antibiotic resistance, hydrolase, periplasm
  
• 2rdb.pdb. oxidoreductase 21-sep-07 2rdb Fe
  Title: x-ray crystal structure of toluene/o-xylene monooxygenase hydroxylase i100w mutant
  Author: l. j. murray, r. garcia-serres, m. s. mccormick, r. davydov, s. naik, b. m. hoffman, b. h. huynh, s. j. lippard
  Keywords: 4-helix bundle,carboxylate bridge, metalloenzyme, tryptophan radical, monooxygenase, oxidoreductase
  
• 2rdd.pdb. membrane protein/transport protein 22-sep-07 2rdd
  Title: x-ray crystal structure of acrb in complex with a novel transmembrane helix.
  Author: s. tornroth-horsefield, p. gourdon, r. horsefield, r. neutze
  Keywords: multidrug efflux, transporter, antiporter, membrane protein, novel transmembrane helix, acrb, yajc, inner membrane, membrane protein/transport protein complex
  
• 2rfn.pdb. transferase 01-oct-07 2rfn F
  Title: x-ray structure of c-met with inhibitor.
  Author: s. f. bellon, p. kaplan-lefko, y. yang, y. zhang, j. moriguchi, i. dussault
  Keywords: atp- binding, glycoprotein, membrane, nucleotide-binding, phosphorylation, proto-oncogene, transferase, transmembrane, tyrosine-protein kinase
  
• 2rfs.pdb. transferase 01-oct-07 2rfs Cl
  Title: x-ray structure of su11274 bound to c-met
  Author: s. f. bellon, p. kaplan-lefko, y. yang, y. zhang, j. moriguchi, i. dussault
  Keywords: receptor tyrosine kinase, su11274, atp-binding, glycoprotein, membrane, nucleotide-binding, phosphorylation, proto-oncogene, transferase, transmembrane, tyrosine- protein kinase
  
• 2rks.pdb. hydrolase 17-oct-07 2rks
  Title: crystal structure of staphylococcal nuclease variant phs l38k at cryogenic temperature
  Author: j. l. schlessman, m. j. harms, e. b. garcia-moreno
  Keywords: hyperstable variant, hydrolase, internal ion pair
  
• 2rmq.pdb. deoxyribonucleic acid 12-nov-07 2rmq Ho (NMR)
  Title: solution structure of fully modified 4'-thiodna with the sequence of d(cgcgaattcgcg)
  Author: a. matsugami, t. ohyama, m. inada, m. katahira
  Keywords: a-form
  
• 2v08.pdb. photosynthesis 10-may-07 2v08 Cl Zn Fe
  Title: structure of wild-type phormidium laminosum cytochrome c6
  Author: j. a. r. worrall, b. g. schlarb-ridley, t. reda, m. j. marcaida, r. j. moorlen, j. wastl, j. hirst, d. s. bendall, b. f. luisi, c. j. howe
  Keywords: photosynthesis, cyano-bacteria, electron-transfer
  
• 2v1e.pdb. oxygen transport 23-may-07 2v1e Fe
  Title: crystal structure of radiation-induced myoglobin compound ii - intermediate h at ph 6.8
  Author: h. -p. hersleth, c. h. gorbitz, k. k. andersson
  Keywords: oxygen transport, oxygen activation, haem, iron, heme, ferryl, transport, peroxidase, reaction intermediate, monooxygenase, metal-binding, muscle protein
  
• 2v1g.pdb. oxygen transport 24-may-07 2v1g Fe
  Title: crystal structure of radiation-induced myoglobin compound ii - intermediate h at ph 5.2
  Author: h. -p. hersleth, b. dalhus, c. h. gorbitz, k. k. andersson
  Keywords: oxygen transport, oxygen activation, peroxidase, monooxygenase, metal-binding, reaction intermediate, heme, ferryl, transport, haem, iron, radiation
  
• 2v3n.pdb. transport protein 19-jun-07 2v3n Cl Co
  Title: crystallographic analysis of upper axial ligand substitutions in cobalamin bound to transcobalamin
  Author: j. wuerges, s. geremia, l. randaccio
  Keywords: transport, glycoprotein, ion transport, vitamin b12 transport protein, cobalt transport, beta ligand substitution
  
• 2v3p.pdb. transport protein 19-jun-07 2v3p Cl Co
  Title: crystallographic analysis of beta-axial ligand substitutions in cobalamin bound to transcobalamin
  Author: j. wuerges, s. geremia, l. randaccio
  Keywords: transport, ion transport, vitamin b12 transport protein, transport protein, cobalt transport, beta ligand substitution
  
• 2v7k.pdb. biosynthetic protein 30-jul-07 2v7k Fe
  Title: prnb d-tryptophan complex
  Author: j. h. naismith
  Keywords: ido, tdo, biosynthetic protein
  
• 2van.pdb. transferase 03-sep-07 2van
  Title: nucleotidyl transfer mechanism of mismatched dntp incorporation by dna polymerase b by structural and kinetic analyses
  Author: h. c. chan, c. c. chou, k. h. tang, m. niebuhr, c. s. tung, m. d. tsai
  Keywords: dna-directed dna polymerase, lyase, sodium, nucleus, magnesium, dna damage, dna synthesis, dna replication, dna polymerase beta, dna repair, transferase, dna-binding, metal-binding
  
• 2vc5.pdb. hydrolase 18-sep-07 2vc5 Co Fe
  Title: structural basis for natural lactonase and promiscuous phosphotriesterase activities
  Author: m. elias, j. dupuy, l. merone, l. mandrich, s. moniot, c. lecomte, m. rossi, p. masson, g. manco, e. chabriere
  Keywords: promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase, biotechnology, quorum sensing
  
• 2vc7.pdb. hydrolase 19-sep-07 2vc7 Co Fe
  Title: structural basis for natural lactonase and promiscuous phosphotriesterase activities
  Author: m. elias, j. dupuy, l. merone, l. mandrich, s. moniot, d. rochu, c. lecomte, m. rossi, p. masson, g. manco, e. chabriere
  Keywords: promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase, biotechnology, quorum sensing
  
• 2vcq.pdb. isomerase 26-sep-07 2vcq
  Title: complex structure of prostaglandin d2 synthase at 1.95a.
  Author: m. hohwy, l. spadola, b. lundquist, k. von, wachenfeldt, s. persdotter, p. hawtin, j. dahmen, i. groth-clausen, r. h. a. folmer, k. edman
  Keywords: fatty acid biosynthesis, prostaglandin d2 synthase, pgds, asthma, cytoplasm, isomerase, lipid synthesis
  
• 2vcw.pdb. isomerase 27-sep-07 2vcw
  Title: complex structure of prostaglandin d2 synthase at 1.95a.
  Author: m. hohwy, l. spadola, b. lundquist, k. von, wachenfeldt, s. persdotter, p. hawtin, j. dahmen, i. groth-clausen, r. h. a. folmer, k. edman
  Keywords: fatty acid biosynthesis, prostaglandin d2 synthase, pgds, asthma, cytoplasm, isomerase, lipid synthesis
  
• 2vcx.pdb. isomerase 27-sep-07 2vcx Mg
  Title: complex structure of prostaglandin d2 synthase at 2.1a.
  Author: m. hohwy, l. spadola, b. lundquist, k. von wachenfeldt, s. persdotter, p. hawtin, j. dahmen, i. groth-clausen, r. h. a. folmer, k. edman
  Keywords: fatty acid biosynthesis, prostaglandin d2 synthase, pgds, asthma, cytoplasm, isomerase, lipid synthesis
  
• 2vcz.pdb. isomerase 28-sep-07 2vcz
  Title: complex structure of prostaglandin d2 synthase at 1.95a.
  Author: m. hohwy, l. spadola, b. lundquist, k. von wachenfeldt, s. persdotter, p. hawtin, j. dahmen, i. groth-clausen, r. h. a. folmer, k. edman
  Keywords: fatty acid biosynthesis, prostaglandin d2 synthase, pgds, asthma, cytoplasm, isomerase, lipid synthesis
  
• 2vd0.pdb. isomerase 28-sep-07 2vd0
  Title: complex structure of prostaglandin d2 synthase at 2.2a.
  Author: m. hohwy, l. spadola, b. lundquist, k. von, wachenfeldt, s. persdotter, p. hawtin, j. dahmen, i. groth-clausen, r. h. a. folmer, k. edman
  Keywords: fatty acid biosynthesis, prostaglandin d2 synthase, pgds, asthma, cytoplasm, isomerase, lipid synthesis
  
• 2vd1.pdb. isomerase 28-sep-07 2vd1 Mg F
  Title: complex structure of prostaglandin d2 synthase at 2.25a.
  Author: m. hohwy, l. spadola, b. lundquist, k. von, wachenfeldt, s. persdotter, p. hawtin, j. dahmen, i. groth-clausen, r. h. a. folmer, k. edman
  Keywords: fatty acid biosynthesis, prostaglandin d2 synthase, pgds, asthma, cytoplasm, isomerase, lipid synthesis
  
• 2vok.pdb. immune system 19-feb-08 2vok
  Title: murine trim21
  Author: a. h. keeble, z. khan, a. forster, l. c. james
  Keywords: zinc-finger, dna-binding, rna-binding, coiled coil
  
• 2vol.pdb. immune system 19-feb-08 2vol
  Title: murine trim21 in complex with murine igg fc
  Author: a. h. keeble, z. khan, a. forster, l. c. james
  Keywords: polymorphism, metal-binding, ribonucleoprotein, systemic lupus erythematosus
  
• 2vr4.pdb. hydrolase 25-mar-08 2vr4 Cl Br
  Title: transition-state mimicry in mannoside hydrolysis: characterisation of twenty six inhibitors and insight into binding from linear free energy relationships and 3-d structure
  Author: l. n. tailford, w. a. offen, n. smith, c. dumon, c. moreland, j. gratien, m. heck, r. v. stick, y. bleriot, a. vasella, h. j. gilbert, g. j. davies
  Keywords: hydrolase, transition state mimic, mannosidase, glycoside hydrolase
  
• 2vr6.pdb. oxidoreductase 28-mar-08 2vr6 Cu Zn
  Title: crystal structure of g85r als mutant of human cu,zn superoxide dismutase (cuznsod) at 1.3 a resolution
  Author: s. antonyuk, x. cao, s. v. seetharaman, l. j. whitson, a. b. taylor, s. p. holloway, r. w. strange, p. a. doucette, a. tiwari, l. j. hayward, s. padua, j. a. cohlberg, j. selverstone valentine, s. s. hasnain, p. j. hart
  Keywords: copper, human cu, cytoplasm, acetylation, ubl conjugation, disease mutation, zn superoxide dismutase, amyotrophic lateral sclerosis, antioxidant, metal-binding, oxidoreductase
  
• 2vr7.pdb. oxidoreductase 28-mar-08 2vr7 Cu Zn
  Title: crystal structure of g85r als mutant of human cu,zn superoxide dismutase (cuznsod) at 1.58 a resolution
  Author: s. antonyuk, x. cao, s. v. seetharaman, l. j. whitson, a. b. taylor, s. p. holloway, r. w. strange, p. a. doucette, a. tiwari, l. j. hayward, s. padua, j. a. cohlberg, j. selverstone valentine, s. s. hasnain, p. j. hart
  Keywords: copper, human cu, cytoplasm, acetylation, ubl conjugation, disease mutation, zn superoxide dismutase, amyotrophic lateral sclerosis, antioxidant, metal-binding, oxidoreductase
  
• 2vre.pdb. isomerase 31-mar-08 2vre Cl
  Title: crystal structure of human peroxisomal delta3,5, delta2,4-dienoyl coa isomerase
  Author: w. yue, k. guo, f. von delft, e. pilka, j. murray, a. roos, g. kochan, c. bountra, c. arrowsmith, m. wikstrom, a. edwards, u. oppermann
  Keywords: 4-dienoyl-coa isomerase, polymorphism, mitochondrion, phosphoprotein, delta3, 5-delta2, isomerase, peroxisome, transit peptide, lipid metabolism
  
• 2yr4.pdb. oxidoreductase 02-apr-07 2yr4
  Title: crystal structure of l-phenylalanine oxiase from psuedomonas sp. p-501
  Author: k. ida, m. kurabayashi, m. suguro, h. suzuki
  Keywords: amino oxidase, flavoenzyme, oxidoreductase
  
• 2yr5.pdb. oxidoreductase 02-apr-07 2yr5
  Title: crystal structure of l-phenylalanine oxidase from psuedomonas sp.p501
  Author: k. ida, m. kurabayashi, m. suguro, t. hikima, m. yamamoto, h. suzuki
  Keywords: amino oxidase, flavoenzyme, oxidoreductase
  
• 2yr6.pdb. oxidoreductase 02-apr-07 2yr6
  Title: crystal structure of l-phenylalanine oxidase from psuedomonas sp.p501
  Author: k. ida, m. kurabayashi, m. suguro, h. suzuki
  Keywords: amino oxidase, flavoenzyme, oxidoreductase
  
• 2yri.pdb. transferase 02-apr-07 2yri
  Title: crystal structure of alanine-pyruvate aminotransferase with 2-methylserine
  Author: i. miyahara, m. matsumura, m. goto, r. omi, k. hirotsu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2yrr.pdb. transferase 02-apr-07 2yrr
  Title: hypothetical alanine aminotransferase (tth0173) from thermus thermophilus hb8
  Author: i. miyahara, m. matsumura, m. goto, r. omi, k. hirotsu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2yt5.pdb. transcription 05-apr-07 2yt5 He Hg Zn (NMR, 20 structures)
  Title: solution structure of the phd domain of metal-response element-binding transcription factor 2
  Author: k. masuda, y. muto, k. isono, s. watanabe, t. harada, t. kigawa, h. koseki, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2yt7.pdb. protein transport 05-apr-07 2yt7 He Hg (NMR, 20 structures)
  Title: solution structure of the pdz domain of amyloid beta a4 precursor protein-binding family a member 3
  Author: w. dang, y. muto, m. inoue, t. kigawa, m. shirouzu, t. tarada, m. seiki, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, protein transport
  
• 2yu7.pdb. signaling protein 05-apr-07 2yu7 He Hg (NMR, 20 structures)
  Title: solution structure of the shp-1 c-terminal sh2 domain complexed with a tyrosine-phosphorylated peptide from nkg2a
  Author: t. kasai, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2yug.pdb. gene regulation 06-apr-07 2yug He Hg (NMR, 20 structures)
  Title: solution structure of mouse frg1 protein
  Author: k. saito, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, gene regulation
  
• 2yuh.pdb. chaperone 06-apr-07 2yuh He Hg (NMR, 20 structures)
  Title: solution structure of the c-terminal region in human tubulin folding cofactor c
  Author: k. saito, n. tochio, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: beta-tubulin folding, beta-roll, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, chaperone
  
• 2yui.pdb. apoptosis 06-apr-07 2yui He Hg (NMR, 20 structures)
  Title: solution structure of the n-terminal domain in human cytokine-induced apoptosis inhibitor anamorsin
  Author: k. saito, t. tomizawa, n. tochio, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: ciapin1, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2yuj.pdb. protein binding 06-apr-07 2yuj He Hg (NMR, 20 structures)
  Title: solution structure of human ubiquitin fusion degradation protein 1 homolog ufd1
  Author: k. saito, t. tomizawa, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: degradation, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, protein binding
  
• 2yv5.pdb. hydrolase 09-apr-07 2yv5 Cl Zn
  Title: crystal structure of yjeq from aquifex aeolicus
  Author: h. wang, t. kaminishi, k. hanawa-suetsugu, c. takemoto, t. terada, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: gtpase, permutation, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2yv6.pdb. apoptosis 09-apr-07 2yv6 Se
  Title: crystal structure of ms0836
  Author: h. wang, s. kishishita, k. murayama, c. takemoto, t. terada, m. shirouzu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: bcl domain, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, apoptosis
  
• 2yv8.pdb. sugar binding protein 10-apr-07 2yv8 Se
  Title: crystal structure of n-terminal domain of human galectin-8
  Author: s. kishishita, a. nishino, k. murayama, t. terada, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, sugar binding protein
  
• 2yvd.pdb. hydrolase 11-apr-07 2yvd Zn
  Title: crystal structure of h400v mutant ttha0252 from thermus thermophilus hb8
  Author: h. ishikawa, n. nakagawa, s. kuramitsu, s. yokoyama, r. masui, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, hydrolase
  
• 2yve.pdb. transcription 12-apr-07 2yve Cl
  Title: crystal structure of the tetr-family portein cgl2612 from c.glutamicum bound to methylene blue
  Author: h. itou, y. shirakihara, i. tanaka
  Keywords: helix-turn-helix, tetr-family
  
• 2yvh.pdb. transcription/dna 12-apr-07 2yvh Se
  Title: crystal structure of the tetr-family protein cgl2612 from c.glutamicum bound to dna
  Author: h. itou, y. shirakihara, i. tanaka
  Keywords: helix-turn-helix, tetr-family, transcription/dna complex
  
• 2yvi.pdb. cell adhesion 12-apr-07 2yvi
  Title: crystal structure of a death domain of human ankryn protein
  Author: ihsanawati, y. bessho, l. chen, z. j. liu, b. c. wang, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: death domain, monomer, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, cell adhesion
  
• 2yvq.pdb. ligase 13-apr-07 2yvq
  Title: crystal structure of mgs domain of carbamoyl-phosphate synthetase from homo sapiens
  Author: y. xie, ihsanawati, s. kishishita, k. murayama, c. takemoto, m. shirozu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, ligase
  
• 2yvr.pdb. metal binding protein 13-apr-07 2yvr Zn
  Title: crystal structure of ms1043
  Author: h. wang, s. kishishita, k. murayama, c. takemoto, t. terada, m. shirouzu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, metal binding protein
  
• 2yvs.pdb. oxidoreductase 15-apr-07 2yvs
  Title: crystal structure of glycolate oxidase subunit glce from thermus thermophilus hb8
  Author: k. yoneda, h. sakuraba, s. kuramitsu, t. ohshima
  Keywords: oxidoreductase
  
• 2ywq.pdb. ribosomal protein 21-apr-07 2ywq Se
  Title: crystal structure of thermus thermophilus protein y n- terminal domain
  Author: m. kawazoe, c. takemoto, t. kaminishi, a. tatsuguchi, y. saito, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, ribosomal protein
  
• 2z5u.pdb. oxidoreductase 17-jul-07 2z5u
  Title: crystal structure of lysine-specific histone demethylase 1
  Author: s. mimasu, t. sengoku, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: repressor, transcription regulation, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2z6b.pdb. hydrolase/structural protein 28-jul-07 2z6b
  Title: crystal structure analysis of (gp27-gp5)3 conjugated with fe(iii) protoporphyrin
  Author: t. koshiyama, n. yokoi, t. ueno, s. kanamaru, s. nagano, y. shiro, f. arisaka, y. watanabe
  Keywords: antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase, late protein, virion, hydrolase/structural protein complex
  
• 2zaj.pdb. protein binding 05-oct-07 2zaj He Hg (NMR, 20 structures)
  Title: solution structure of the short-isoform of the second ww domain from the human membrane-associated guanylate kinase, ww and pdz domain-containing protein 1 (magi-1)
  Author: s. ohnishi, n. tochio, t. tomizawa, s. koshiba, t. harada, s. watanabe, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, protein binding
  
• 2zci.pdb. signaling protein,lyase 09-nov-07 2zci
  Title: structure of a gtp-dependent bacterial pep-carboxykinase from corynebacterium glutamicum
  Author: s. aich, l. prasad, l. t. j. delbaere
  Keywords: carboxykinase, signaling protein,lyase
  
• 2zcy.pdb. hydrolase 15-nov-07 2zcy
  Title: yeast 20s proteasome:syringolin a-complex
  Author: m. groll, r. dudler, m. kaiser
  Keywords: cytoplasm, hydrolase, nucleus, protease, proteasome, threonine protease, ubl conjugation, phosphoprotein, zymogen
  
• 3b5u.pdb. motor protein 26-oct-07 3b5u (cryo-electron microscopy)
  Title: actin filament model from extended form of acromsomal bundle in the limulus sperm
  Author: y. cong, m. topf, a. sali, p. matsudaira, m. dougherty, w. chiu, m. f. schmid
  Keywords: actin, acromsomal bundle, cryoem, motor protein
  
• 3b8i.pdb. lyase 01-nov-07 3b8i Mg
  Title: crystal structure of oxaloacetate decarboxylase from pseudomonas aeruginosa (pa4872) in complex with oxalate and mg2+.
  Author: b. c. narayanan, o herzberg
  Keywords: helix swapping, lyase
  
• 3b9u.pdb. hormone 06-nov-07 3b9u
  Title: crystal structure of l26n/d28n/h93g mutant of human acidic fibroblast growth factor
  Author: m. blaber, j. lee
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3ba4.pdb. hormone 07-nov-07 3ba4
  Title: crystal structure of l26d mutant of human acidic fibroblast growth factor
  Author: m. blaber, j. lee
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3ba5.pdb. hormone 07-nov-07 3ba5
  Title: crystal structure of d28a mutant of human acidic fibroblast growth factor
  Author: m. blaber, j. lee
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3ba7.pdb. hormone 07-nov-07 3ba7
  Title: crystal structure of l26n/d28a mutant of human acidic fibroblast growth factor
  Author: m. blaber, j. lee
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3bad.pdb. hormone 07-nov-07 3bad
  Title: crystal structure of d70a/h93g mutant of human acidic fibroblast growth factor
  Author: m. blaber, j. lee
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3bae.pdb. immune system 07-nov-07 3bae
  Title: crystal structure of fab wo2 bound to the n terminal domain of amyloid beta peptide (1-28)
  Author: l. a. miles, k. s. wun, g. a. crespi, m. w. parker
  Keywords: amyloid beta peptide, fab, wo2, alzheimer's disease, immunotherapies, app, immune system
  
• 3bag.pdb. hormone 07-nov-07 3bag
  Title: crystal structure of k112n/n114a mutant of human acidic fibroblast growth factor
  Author: j. lee, m. blaber
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3bah.pdb. hormone 07-nov-07 3bah
  Title: crystal structure of k112n mutant of human acidic fibroblast growth factor
  Author: j. lee, m. blaber
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3bao.pdb. hormone 08-nov-07 3bao
  Title: crystal structure of l26n mutant of human acidic fibroblast growth factor
  Author: j. lee, m. blaber
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3baq.pdb. hormone 08-nov-07 3baq
  Title: crystal structure of l26a mutant of human acidic fibroblast growth factor
  Author: j. lee, m. blaber
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3bau.pdb. hormone 08-nov-07 3bau
  Title: crystal structure of k12v/l26d/d28a mutant of human acidic fibroblast growth factor
  Author: j. lee, m. blaber
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3bav.pdb. hormone 08-nov-07 3bav
  Title: crystal structure of l26a/d28n mutant of human acidic fibroblast growth factor
  Author: j. lee, m. blaber
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3bb1.pdb. hydrolase 09-nov-07 3bb1 Mg
  Title: crystal structure of toc34 from pisum sativum in complex with mg2+ and gmppnp
  Author: p. koenig, i. sinning, e. schleiff, i. tews
  Keywords: gtpase domain, chloroplast import, gtp- binding, hydrolase, membrane, nucleotide-binding, outer membrane, plastid, protein transport, transmembrane, transport
  
• 3bb2.pdb. hormone 09-nov-07 3bb2
  Title: crystal structure of l26d/d28n mutant of human acidic fibroblast growth factor
  Author: j. lee, m. blaber
  Keywords: acetylation, angiogenesis, developmental protein, differentiation, growth factor, heparin-binding, mitogen, polymorphism, hormone
  
• 3bb3.pdb. hydrolase 09-nov-07 3bb3 Mg
  Title: crystal structure of toc33 from arabidopsis thaliana in complex with gdp and mg2+
  Author: p. koenig, i. sinning, e. schleiff, i. tews
  Keywords: gtpase domain, chloroplast import, gtp- binding, hydrolase, membrane, nucleotide-binding, outer membrane, plastid, protein transport, transmembrane, transport
  
• 3bb4.pdb. hydrolase 09-nov-07 3bb4 Mg
  Title: crystal structure of toc33 from arabidopsis thaliana in complex with mg2+ and gmppnp
  Author: p. koenig, i. sinning, e. schleiff, i. tews
  Keywords: gtpase domain, chloroplast import, hydrolase
  
• 3bdm.pdb. hydrolase 15-nov-07 3bdm
  Title: yeast 20s proteasome:glidobactin a-complex
  Author: m. groll, r. dudler, m. kaiser
  Keywords: ubiquitin, proteolysis, pathogen, virulence factor, cytoplasm, hydrolase, nucleus, protease, threonine protease, ubl conjugation, phosphoprotein, zymogen
  
• 3bdn.pdb. transcription/dna 15-nov-07 3bdn
  Title: crystal structure of the lambda repressor
  Author: s. e. stayrook, p. jaru-ampornpam, a. hochschild, m. lewis
  Keywords: repressor, allostery, cooperativity, dna binding, transcription/dna complex
  
• 3bkc.pdb. immune system 06-dec-07 3bkc Na
  Title: crystal structure of anti-amyloid beta fab wo2 (p21, formb)
  Author: l. a. miles, k. s. wun, g. a. crespi, m. fodero-tavoletti, d. galatis, c. j. bageley, k. beyreuther, c. l. masters, r. cappai, w. j. mckinstry, k. j. barnham, m. w. parker
  Keywords: amyloid beta peptide, fab, wo2, alzheimer's disease, immunotherapies, app, immune system
  
• 3bkj.pdb. immune system 06-dec-07 3bkj
  Title: crystal structure of fab wo2 bound to the n terminal domain of amyloid beta peptide (1-16)
  Author: l. a. miles, k. s. wun, g. a. crespi, m. fodero-tavoletti, d. galatis, c. j. bageley, k. beyreuther, c. l. masters, r. cappai, w. j. mckinstry, k. j. barnham, m. w. parker
  Keywords: amyloid beta peptide, fab, wo2, alzheimer's disease, immunotherapies, app, immune system
  
• 3bkm.pdb. immune system 07-dec-07 3bkm Zn Na
  Title: structure of anti-amyloid-beta fab wo2 (form a, p212121)
  Author: l. a. miles, k. s. wun, g. a. crespi, m. fodero-tavoletti, d. galatis, c. j. bageley, k. beyreuther, c. l. masters, r. cappai, w. j. mckinstry, k. j. barnham, m. w. parker
  Keywords: amyloid beta peptide, fab, wo2, alzheimer's disease, immunotherapies, app, immune system
  
• 3btn.pdb. biosynthetic protein 30-dec-07 3btn
  Title: crystal structure of antizyme inhibitor, an ornithine decarboxylase homologous protein
  Author: o. dym, t. unger, s. albeck, c. kahana, israel structural proteomics center (ispc)
  Keywords: structural genomics, israel structural proteomics center, ispc, polyamine biosynthesis, biosynthetic protein
  
• 3bv3.pdb. transferase 04-jan-08 3bv3
  Title: morpholino pyrrolotriazine p38 alpha map kinase inhibitor compound 2
  Author: j. s. sack
  Keywords: kinase, transferase, p38 map kinase, alternative splicing, atp-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein
  
• 3bwp.pdb. ribonucleic acid 10-jan-08 3bwp Mg K
  Title: crystal structure of a self-spliced group ii intron
  Author: n. toor, k. s. keating, s. d. taylor, a. m. pyle
  Keywords: ribonucleic acid, intron, group ii
  
• 3bx5.pdb. signaling protein, transferase 11-jan-08 3bx5
  Title: p38 alpha map kinase complexed with bms-640994
  Author: j. s. sack
  Keywords: kinase, transferase, p38 map kinase, signaling protein, transferase
  
• 3c08.pdb. immune system 18-jan-08 3c08
  Title: crystal structure the fab fragment of matuzumab/emd72000 (fab72000)
  Author: k. m. ferguson, j. schmiedel, t. knoechel
  Keywords: antitumor, drug, immune system
  
• 3c09.pdb. immune system/transferase 18-jan-08 3c09
  Title: crystal structure the fab fragment of matuzumab (fab72000) in complex with domain iii of the extracellular region of egfr
  Author: k. m. ferguson, j. schmiedel, t. knoechel
  Keywords: glycoprotein, antigen, antibody complex, fab fragment, antitumor, drug immune system/transferase complex
  
• 3c1g.pdb. transport protein 23-jan-08 3c1g
  Title: substrate binding, deprotonation and selectivity at the periplasmic entrance of the e. coli ammonia channel amtb
  Author: a. javelle, d. kostrewa, d. lupo, f. k. winkler
  Keywords: membrane protein, ammonia transport, wild-type amtb, inner membrane, transmembrane
  
• 3c1h.pdb. transport protein 23-jan-08 3c1h
  Title: substrate binding, deprotonation and selectivity at the periplasmic entrance of the e. coli ammonia channel amtb
  Author: d. lupo, f. k. winkler
  Keywords: membrane protein, ammonia transport, phe- gate mutant, amtb, inner membrane, transmembrane
  
• 3c1i.pdb. transport protein 23-jan-08 3c1i
  Title: substrate binding, deprotonation and selectivity at the periplasmic entrance of the e. coli ammonia channel amtb
  Author: d. lupo, f. k. winkler
  Keywords: membrane protein, ammonia transport, phe- gate mutant, amtb, inner membrane, transmembrane
  
• 3c1j.pdb. transport protein 23-jan-08 3c1j
  Title: substrate binding, deprotonation and selectivity at the periplasmic entrance of the e. coli ammonia channel amtb
  Author: d. lupo, f. k. winkler
  Keywords: membrane protein, ammonia transport, phe- gate double mutant, amtb, inner membrane, transmembrane'
  
• 3c5v.pdb. hydrolase 01-feb-08 3c5v
  Title: pp2a-specific methylesterase apo form (pme)
  Author: y. xing, z. li, y. chen, j. stock, p. d. jeffrey, y. shi
  Keywords: pp2a, alternative splicing, hydrolase, phosphoprotein, serine esterase
  
• 3c5w.pdb. hydrolase 01-feb-08 3c5w
  Title: complex between pp2a-specific methylesterase pme-1 and pp2a core enzyme
  Author: y. xing, z. li, y. chen, j. stock, p. d. jeffrey, y. shi
  Keywords: phosphatase, pp2a, hydrolase
  
• 3c8j.pdb. immune system 12-feb-08 3c8j
  Title: the crystal structure of natural killer cell receptor ly49c
  Author: l. deng, r. a. mariuzza
  Keywords: mhc, virus, crystal structure, immune system
  
• 3c8k.pdb. immune system 12-feb-08 3c8k
  Title: the crystal structure of ly49c bound to h-2kb
  Author: l. deng, r. a. mariuzza
  Keywords: glycoprotein, immune response, membrane, mhc i, transmembrane, immunoglobulin domain, secreted, immune system
  
• 3cdz.pdb. blood clotting 27-feb-08 3cdz Cu Ca
  Title: crystal structure of human factor viii
  Author: j. c. ngo, m. huang, d. a. roth, b. c. furie, b. furie
  Keywords: blood coagulation, cofactor, factor viii, refacto, acute phase, calcium, disease mutation, glycoprotein, hemophilia, metal-binding, pharmaceutical, polymorphism, secreted, sulfation
  
• 3cfj.pdb. immune system 04-mar-08 3cfj
  Title: crystal structure of catalytic elimination antibody 34e4, orthorhombic crystal form
  Author: e. w. debler, i. a. wilson
  Keywords: catalytic antibody, chimeric fab, apo form, proton transfer, conformational change, immune system, immunoglobulin domain, immunoglobulin v region
  
• 3cfk.pdb. immune system 04-mar-08 3cfk Cd
  Title: crystal structure of catalytic elimination antibody 34e4, triclinic crystal form
  Author: e. w. debler, i. a. wilson
  Keywords: catalytic antibody, chimeric fab, apo form, proton transfer, conformational change, immune system, chimera, immunoglobulin domain, immunoglobulin v region
  
• 3ciu.pdb. oxygen binding 11-mar-08 3ciu Fe
  Title: site-selective glycosylation of cysteine-93 beta on the surface of bovine hemoglobin and its application as a novel oxygen therapeutic
  Author: v. s. bhatt, y. zhang, g. sun, p. g. wang, a. f. palmer
  Keywords: glycosylation, site-selective, oxygen carrier, blood substitute, heme, iron, oxygen transport, polymorphism, transport, oxygen binding
  
• 3ciw.pdb. adomet binding protein 12-mar-08 3ciw Cl Fe
  Title: x-ray structure of the [fefe]-hydrogenase maturase hyde from thermotoga maritima
  Author: y. nicolet, j. k. ruback, m. c. posewitz, p. amara, c. mathevon, m. atta, m. fontecave, j. c. fontecilla-camps
  Keywords: fefe-hydrogenase maturation, beta barrel, fe4s4 cluster, adomet binding protein
  
• 3cix.pdb. adomet binding protein 12-mar-08 3cix Cl Fe
  Title: x-ray structure of the [fefe]-hydrogenase maturase hyde from thermotoga maritima in complex with thiocyanate
  Author: y. nicolet, j. k. ruback, m. c. posewitz, p. amara, c. mathevon, m. atta, m. fontecave, j. c. fontecilla-camps
  Keywords: fefe-hydrogenase maturation, beta barrel, fe4s4 cluster, thiocyanate, fe2s2 cluster, adomet binding protein
  
• 3ciz.pdb. transferase 12-mar-08 3ciz Zn Br
  Title: crystal structure of hepatitis c virus rna-dependent rna polymerase ns5b in complex with small molecule fragments
  Author: j. hendle
  Keywords: transcription regulation, transferase, transmembrane, ubl conjugation, viral nucleoprotein, virion, zinc
  
• 3cj0.pdb. transferase 12-mar-08 3cj0 Br
  Title: crystal structure of hepatitis c virus rna-dependent rna polymerase ns5b in complex with small molecule fragments
  Author: c. kissinger
  Keywords: transcription regulation, transferase, transmembrane, ubl conjugation, viral nucleoprotein, virion, zinc
  
• 3cj2.pdb. transferase 12-mar-08 3cj2 Br Ni
  Title: crystal structure of hepatitis c virus rna-dependent rna polymerase ns5b in complex with optimized small molecule fragments
  Author: c. kissinger
  Keywords: transcription regulation, transferase, transmembrane, ubl conjugation, viral nucleoprotein, virion, zinc
  
• 3cj3.pdb. transferase 12-mar-08 3cj3 Cl Br Ni
  Title: crystal structure of hepatitis c virus rna-dependent rna polymerase ns5b in complex with optimized small molecule fragments
  Author: c. kissinger
  Keywords: transcription regulation, transferase, transmembrane, ubl conjugation, viral nucleoprotein, virion, zinc
  
• 3cj4.pdb. transferase 12-mar-08 3cj4 Br Ni
  Title: crystal structure of hepatitis c virus rna-dependent rna polymerase ns5b in complex with optimized small molecule fragments
  Author: s. s. antonysamy
  Keywords: transcription regulation, transferase, transmembrane, ubl conjugation, viral nucleoprotein, virion, zinc
  
• 3cj5.pdb. transferase 12-mar-08 3cj5 Br
  Title: crystal structure of hepatitis c virus rna-dependent rna polymerase ns5b in complex with optimized small molecule fragments
  Author: j. hendle
  Keywords: transcription regulation, transferase, transmembrane, ubl conjugation, viral nucleoprotein, virion, zinc
  
• 3cmk.pdb. hydrolase 22-mar-08 3cmk Co
  Title: crystal structure of an encephalitozoon cuniculi methionine aminopeptidase type 2 with angiogenesis inhibitor fumagillin bound
  Author: j. alvarado, m. russell, a. zhang, j. adams, r. toro, s. k. burley, l. m. weiss, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: metal-binding, protease
  
• 3cne.pdb. hydrolase 25-mar-08 3cne Zn Ca Se
  Title: crystal structure of the putative protease i from bacteroides thetaiotaomicron
  Author: r. zhang, l. volkart, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, mcsg, protein structure initiative, midwest center for structural genomics, hydrolase
  
• 3cnu.pdb. structural genomics, unknown function 26-mar-08 3cnu
  Title: crystal structure of the predicted coding region af_1534 from archaeoglobus fulgidus
  Author: r. zhang, e. evdokimova, m. kudritska, a. savchenko, a. m. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: archaeoglobus fulgidus, structural genomics, mcsg, psi-2, protein structure initiative, midwest center for structural genomics, structural genomics, unknown function
  
• 3coi.pdb. transferase 28-mar-08 3coi
  Title: crystal structure of p38delta kinase
  Author: s. atwell, s. k. burley, a. houle, a. ramos, j. m. sauder, new york structural genomix research consortium (nysgxrc)
  Keywords: atp-binding, cell cycle, nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase
  
• 3cok.pdb. transferase 28-mar-08 3cok
  Title: crystal structure of plk4 kinase
  Author: s. atwell, s. k. burley, a. houle, b. leon, l. a. pelletier, j. m. sauder, new york structural genomix research consortium (nysgxrc)
  Keywords: polymorphism, serine/threonine-protein kinase, transferase
  
• 3com.pdb. transferase 28-mar-08 3com
  Title: crystal structure of mst1 kinase
  Author: s. atwell, s. k. burley, m. dickey, b. leon, j. m. sauder, new york structural genomix research consortium (nysgxrc)
  Keywords: apoptosis, atp-binding, coiled coil, cytoplasm, magnesium, metal-binding, nucleotide-binding, nucleus, phosphoprotein, polymorphism, transferase
  
• 3cos.pdb. oxidoreductase 29-mar-08 3cos Zn
  Title: crystal structure of human class ii alcohol dehydrogenase (adh4) in complex with nad and zn
  Author: k. l. kavanagh, n. shafqat, w. yue, f. von delft, s. bishop, a. roos, j. murray, a. m. edwards, c. h. arrowsmith, c. bountra, u. oppermann, structural genomics consortium (sgc)
  Keywords: alcohol dehydrogenase, zinc- dependent, cytoplasm, metal-binding, nad, oxidoreductase, polymorphism, structural genomics, structural genomics consortium, sgc
  
• 3cou.pdb. hydrolase 29-mar-08 3cou
  Title: crystal structure of human nudix motif 16 (nudt16)
  Author: l. tresaugues, m. moche, c. h. arrowsmith, h. berglund, r. d. busam, r. collins, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, m. d. herman, a. johansson, i. johansson, a. kallas, t. karlberg, t. kotenyova, l. lehtio, m. e. nilsson, t. nyman, c. persson, j. sagemark, h. schueler, l. svensson, a. g. thorsell, s. van den berg, m. welin, j. weigelt, m. wikstrom, p. nordlund, structural genomics consortium (sgc)
  Keywords: hydrolase, nudt16, mrna decapping, mrna turnover, structural genomics consortium, sgc, magnesium, manganese, metal-binding
  
• 3cp0.pdb. membrane protein 30-mar-08 3cp0 Cl Zn Se
  Title: crystal structure of the soluble domain of membrane protein implicated in regulation of membrane protease activity from corynebacterium glutamicum
  Author: y. kim, c. tesar, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, protease, membrane protein
  
• 3cp3.pdb. structural genomics, unknown function 31-mar-08 3cp3
  Title: crystal structure of conserved protein of unknown function dip1874 from corynebacterium diphtheriae
  Author: y. kim, r. wu, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, structural genomics, unknown function
  
• 3cp6.pdb. transferase 31-mar-08 3cp6 Mg
  Title: crystal structure of human farnesyl diphosphate synthase (t201a mutant) complexed with mg and biphosphonate inhibitor
  Author: e. s. pilka, j. e. dunford, k. guo, a. c. w. pike, f. von delft, b. l. barnett, f. h. ebetino, c. h. arrowsmith, c. bountra, a. m. edwards, r. g. g. russell, u. oppermann, structural genomics consortium (sgc)
  Keywords: steroid biosynthesis, sterol biosynthesis, transferase
  
• 3cpf.pdb. cell cycle 31-mar-08 3cpf
  Title: crystal structure of human eukaryotic translation initiation factor eif5a
  Author: l. nedyalkova, y. tong, w. tempel, b. hong, f. mackenzie, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: leukemia, apoptosis, sgc, acetylation, alternative splicing, hypusine, initiation factor, nucleus, protein biosynthesis, cell cycle
  
• 3cpk.pdb. structural genomics, unknown function 31-mar-08 3cpk Se
  Title: crystal structure of the q7w7n7_borpa protein from bordetella parapertussis. northeast structural genomics consortium target ber31
  Author: s. m. vorobiev, m. abashidze, j. seetharaman, l. zhao, h. janjua, r. xiao, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: bpp2477, ber31, nesg, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, structural genomics, unknown function
  
• 3cpn.pdb. hydrolase 31-mar-08 3cpn Mg Na Se
  Title: crystal structure of beta-xylosidase, family 43 glycosyl hydrolase from clostridium acetobutylicum
  Author: j. osipiuk, r. wu, r. jedrzejczak, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: apc20493, beta-xylosidase, family 43 glycosyl hydrolase, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 3cps.pdb. oxidoreductase 01-apr-08 3cps
  Title: crystal structure of cryptosporidium parvum glyceraldehyde- 3-phosphate dehydrogenase
  Author: a. k. wernimont, j. lew, i. kozieradzki, d. cossar, m. schapiro, a. bochkarev, c. h. arrowsmith, c. bountra, j. weigelt, a. m. edwards, r. hui, j. pizarro, t. hills, structural genomics consortium (sgc)
  Keywords: glycolysis, malaria, structural genomics, oxidoreductase, structural genomics consortium, sgc
  
• 3cq9.pdb. transferase 02-apr-08 3cq9 Se
  Title: crystal structure of the lp_1622 protein from lactobacillus plantarum. northeast structural genomics consortium target lpr114
  Author: s. m. vorobiev, m. abashidze, j. seetharaman, l. zhao, m. maglaqui, e. l. foote, c. ciccosanti, h. janjua, r. xiao, t. b. acton, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: transferase, thiamine pyrophosphokinase, nesg, lpr114, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium