Recent PDB releases or updates: week of 11 April 2008

• 1uly.pdb. dna binding protein 17-sep-03 1uly Se
  Title: crystal structure analysis of the arsr homologue dna- binding protein from p. horikoshii ot3
  Author: h. itou, m. yao, n. watanabe, i. tanaka
  Keywords: structural genomics, dna binding protein
  
• 2e0w.pdb. transferase 16-oct-06 2e0w
  Title: t391a precursor mutant protein of gamma- glutamyltranspeptidase from escherichia coli
  Author: t. okada, k. wada, k. fukuyama
  Keywords: precursor, gamma-gtp, post-translational processing, maturation, transferase
  
• 2e0x.pdb. transferase 16-oct-06 2e0x Ca Se
  Title: crystal structure of gamma-glutamyltranspeptidase from escherichia coli (monoclinic form)
  Author: t. okada, k. wada, k. fukuyama
  Keywords: ggt, gamma-gtp
  
• 2e0y.pdb. transferase 16-oct-06 2e0y Sm Se
  Title: crystal structure of the samarium derivative of mature gamma-glutamyltranspeptidase from escherichia coli
  Author: t. okada, k. wada, k. fukuyama
  Keywords: ggt, gamma-gt, glutathione
  
• 2elf.pdb. translation 27-mar-07 2elf Se
  Title: crystal structure of the selb-like elongation factor ef-pyl from methanosarcina mazei
  Author: t. yanagisawa, r. ishii, r. fukunaga, t. sengoku, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: elongation factor, pyrrolysine, translation, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2env.pdb. transcription 28-mar-07 2env He Hg Zn (NMR, 20 structures)
  Title: solution sturcture of the c4-type zinc finger domain from human peroxisome proliferator-activated receptor delta
  Author: t. nagashima, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, transcription
  
• 2eo3.pdb. signaling protein 28-mar-07 2eo3 He Hg (NMR, 20 structures)
  Title: solution structure of the sh2 domain from human crk-like protein
  Author: c. kurosaki, m. yoshida, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: repeat, sh2 domain, sh3 domain, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2eqc.pdb. metal binding protein 30-mar-07 2eqc He Hg (NMR, 20 structures)
  Title: solution structure of magnesium-bound form of calmodulin c- domain e104d/e140d mutant
  Author: w. ohashi, t. yamazaki, h. hirota, riken structural genomics/proteomics initiative (rsgi)
  Keywords: metal binding protein
  
• 2eqi.pdb. immune system, hydrolase 30-mar-07 2eqi He Hg (NMR, 20 structures)
  Title: solution structure of the sh3 domain from phospholipase c, gamma 2
  Author: x. r. qin, t. nagashima, f. hayahsi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: hydrolase
  
• 2eqj.pdb. transcription 30-mar-07 2eqj He Hg (NMR, 20 structures)
  Title: solution structure of the tudor domain of metal-response element-binding transcription factor 2
  Author: w. dang, y. muto, k. isono, s. watanabe, t. tarada, t. kigawa, h. koseki, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: metal-regulatory transcription factor 2, pcl2, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2g0e.pdb. transcription 12-feb-06 2g0e
  Title: structure of qacr multidrug transcriptional regulator bound to trivalent and bivalent diamidine drugs
  Author: j. t. schuman
  Keywords: transciptional repressor, trivalent, transcription
  
• 2gby.pdb. transcription 12-mar-06 2gby
  Title: structure of qacr multidrug transcriptional regulator bound to bivalent diamidine berenil
  Author: j. t. schuman
  Keywords: helix-turn-helix, multridrug binding, transcription
  
• 2h2q.pdb. oxidoreductase, transferase 19-may-06 2h2q
  Title: crystal structure of trypanosoma cruzi dihydrofolate reductase-thymidylate synthase
  Author: o. senkovich, n. schormann, d. chattopadhyay
  Keywords: oxidoreductase, transferase
  
• 2hjh.pdb. hydrolase 30-jun-06 2hjh Zn Se
  Title: crystal structure of the sir2 deacetylase
  Author: b. e. hall, t. e. ellenberger
  Keywords: sirtuin, acetyl-adp-ribose, nicotinamide, hydrolase
  
• 2hjo.pdb. luminescent protein 30-jun-06 2hjo Mg
  Title: crystal structure of v224h design intermediate for gfp metal ion reporter
  Author: d. p. barondeau, j. l. tubbs, j. a. tainer, e. d. getzoff
  Keywords: intermediate, gfp, fluorophore, reporter, luminescent protein
  
• 2hqz.pdb. luminescent protein 19-jul-06 2hqz Mg
  Title: crystal structure of l42h design intermediate for gfp metal ion reporter
  Author: d. p. barondeau, j. l. tubbs, j. a. tainer, e. d. getzoff
  Keywords: intermediate, gfp, fluorophore, reporter, luminescent protein
  
• 2hrs.pdb. luminescent protein 20-jul-06 2hrs Mg
  Title: crystal structure of l42h v224h design intermediate for gfp metal ion reporter
  Author: d. p. barondeau, j. l. tubbs, j. a. tainer, e. d. getzoff
  Keywords: intermediate, gfp, fluorophore, reporter, luminescent protein
  
• 2i5a.pdb. deoxyribonucleic acid 24-aug-06 2i5a Mg
  Title: crystal structure of a db1055-d(cgcgaattcgcg)2 complex
  Author: s. neidle, m. p. h. lee
  
  
• 2io4.pdb. dna binding protein 09-oct-06 2io4 Ca
  Title: crystal structure of pcna12 dimer from sulfolobus solfataricus.
  Author: v. hlinkova, h. ling
  Keywords: protein-protein interaction, pcna123 heterotrimer, dna binding protein
  
• 2iot.pdb. hydrolase 10-oct-06 2iot
  Title: clavulanic acid bound to elastase
  Author: c. farady, m. a. navia
  Keywords: hydrolase
  
• 2jj7.pdb. transcription 18-mar-08 2jj7
  Title: crystal structure of the hlyiir mutant protein with residues 170-185 substituted by alanine
  Author: o. v. kovalevskiy, a. a. antson, a. s. solonin
  Keywords: transcription regulation, dna-binding, tetr family, transcription, transcriptional regulator
  
• 2jjd.pdb. hydrolase 31-mar-08 2jjd Cl
  Title: protein tyrosine phosphatase, receptor type, e isoform
  Author: j. m. elkins, e. ugochukwu, i. alfano, a. barr, g. bunkoczi, o. king, p. filippakopoulos, p. savitsky, e. salah, a. pike, c. johansson, s. das, n. burgess-brown, o. gileadi, f. vondelft, c. h. arrowsmith, c. bountra, a. m. edwards, s. knapp
  Keywords: phosphoprotein, protein phosphatase, alternative splicing, consortium, structural, phosphatase, glycoprotein, sgc, ptpre, membrane, genomics, hydrolase, cytoplasm
  
• 2juo.pdb. transcription 31-aug-07 2juo He Hg (NMR, 10 structures)
  Title: gabpa ost domain
  Author: h. kang, m. l. nelson, c. d. mackereth, m. schaerpf, b. j. graves, l. p. mcintosh
  Keywords: ubiquitin, transcription factor, nmr ensemble, ga- binding protein, dna-binding, nucleus, transcription regulation
  
• 2jvp.pdb. transcription regulator 24-sep-07 2jvp He Hg (NMR, 20 structures)
  Title: complete chemical shift assignments and xplor restraints for ymoa
  Author: r. l. mcfeeters, r. byrd
  Keywords: dna-binding, transcription regulator
  
• 2jvx.pdb. metal binding protein 28-sep-07 2jvx He Hg Zn (NMR, 10 structures)
  Title: solution structure of human nemo zinc finger
  Author: f. cordier, e. vinolo, m. veron, m. delepierre, f. agou
  Keywords: nemo zinc finger, beta-beta- alpha fold, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia, host-virus interaction, nucleus, transcription, transcription regulation, metal binding protei...
  
• 2jvy.pdb. metal binding protein 28-sep-07 2jvy He Hg Zn (NMR, 10 structures)
  Title: solution structure of the eda-id-related c417f mutant of human nemo zinc finger
  Author: f. cordier, e. vinolo, m. veron, m. delepierre, f. agou
  Keywords: transcription regulation, metal binding protein
  
• 2jx2.pdb. transcription 02-nov-07 2jx2 He Hg (NMR, 20 structures)
  Title: solution conformation of rna-bound nelf-e rrm
  Author: n. jampani, k. schweimer, s. wenzel, b. m. woehrl, p. roesch
  Keywords: coiled coil, nucleus, phosphorylation, repressor, rna-binding, transcription, transcription regulation, ubl conjugation
  
• 2jxu.pdb. unknown function 30-nov-07 2jxu He Hg (NMR, 20 structures)
  Title: nmr solution structure of kp-terb, a tellurite resistance protein from klebsiella pneumoniae
  Author: s. -k. chiang, y. -c. lou, c. chen
  Keywords: tellurite resistance protein, klebsiella pneumoniae, plasmid, unknown function
  
• 2jz0.pdb. transcription 21-dec-07 2jz0 He Hg (NMR, 20 structures)
  Title: dsx_short
  Author: y. yang, w. zhang, j. r. bayrer, m. a. weiss
  Keywords: sex determination, development, gene regulation, ubiquitin, transcription
  
• 2jz1.pdb. transcription 21-dec-07 2jz1 He Hg (NMR, 20 structures)
  Title: dsx_long
  Author: y. yang, w. zhang, j. r. bayrer, m. a. weiss
  Keywords: sex determination, development, gene regulation, ubiquitin, transcription
  
• 2k0n.pdb. transcription 04-feb-08 2k0n He Hg (NMR, 20 structures)
  Title: solution structure of yeast gal11p kix domain
  Author: h. arthanari, d. p. frueh, g. k. wagner, a. m. naar
  Keywords: activator, nucleus, phosphoprotein, transcription, transcription regulation
  
• 2k1v.pdb. hormone 17-mar-08 2k1v He Hg (NMR, 20 structures)
  Title: r3/i5 relaxin chimera
  Author: k. rosengren, l. m. haugaard-jonsson
  Keywords: relaxin-3, insl5, chimera, cleavage on pair of basic residues, secreted, signaling protein
  
• 2k28.pdb. transcription 27-mar-08 2k28 He Hg (NMR, 20 structures)
  Title: solution nmr structure of the chromo domain of the chromobox protein homolog 4
  Author: l. kaustov, a. lemak, h. quyang, c. fares, a. gutmanas, m. ravichandran, p. loppnau, c. bountra, j. weigelt, a. m. edwards, j. min, c. h. arrowsmith, structural genomics consortium (sgc)
  Keywords: alternative splicing, chromatin regulator, nucleus, phosphoprotein, repressor, transcription, transcription regulation, ubl conjugation, ubl conjugation pathway, structural genomics consortium, sgc
  
• 2o0b.pdb. transferase 27-nov-06 2o0b
  Title: mycobacterium tuberculosis epsp synthase in complex with s3p (partially photolyzed)
  Author: g. p. burenkov, g. s. kachalova, h. d. bartunik, mycobacterium tuberculosis structural proteomics project (xmtb)
  Keywords: epsp synthase, m.tuberculosis, transferase, structural genomics, mycobacterium tuberculosis structural proteomics project, xmtb
  
• 2o0d.pdb. transferase 27-nov-06 2o0d
  Title: mycobacterium tuberculosis epsp synthase in complex with s3p
  Author: g. s. kachalova, h. d. bartunik, mycobacterium tuberculosis structural proteomics project (xmtb)
  Keywords: m.tuberculosis, transferase, structural genomics, mycobacterium tuberculosis structural proteomics project, xmtb
  
• 2o0e.pdb. transferase 27-nov-06 2o0e
  Title: mycobacterium tuberculosis epsp synthase in complex with s3p and pep
  Author: g. s. kachalova, h. d. bartunik, mycobacterium tuberculosis structural proteomics project (xmtb)
  Keywords: epsp synthase, m.tuberculosis, transferase, structural genomics, mycobacterium tuberculosis structural proteomics project, xmtb
  
• 2o0x.pdb. transferase 28-nov-06 2o0x
  Title: mycobacterium tuberculosis epsp synthase in complex with intermediate
  Author: g. s. kachalova, h. d. bartunik, mycobacterium tuberculosis structural proteomics project (xmtb)
  Keywords: epsp synthase, m.tuberculosis, transferase, structural genomics, mycobacterium tuberculosis structural proteomics project, xmtb
  
• 2o0z.pdb. transferase 28-nov-06 2o0z
  Title: mycobacterium tuberculosis epsp synthase in complex with product (eps)
  Author: g. s. kachalova, h. d. bartunik, mycobacterium tuberculosis structural proteomics project (xmtb)
  Keywords: epsp synthase, m.tuberculosis, transferase, structural genomics, mycobacterium tuberculosis structural proteomics project, xmtb
  
• 2o11.pdb. lyase 28-nov-06 2o11 Na
  Title: mycobacterium tuberculosis chorismate synthase
  Author: m. bruning, h. d. bartunik, tb structural genomics consortium (tbsgc), mycobacterium tuberculosis structural proteomics project (xmtb)
  Keywords: m. tuberculosis, chorismate synthase, structural genomics, tb structural genomics consortium, tbsgc, xmtb, mycobacterium tuberculosis structural proteomics project, lyase
  
• 2o12.pdb. lyase 28-nov-06 2o12 Na
  Title: mycobacterium tuberculosis chorismate synthase in complex with fmn
  Author: m. bruning, h. d. bartunik, tb structural genomics consortium (tbsgc), mycobacterium tuberculosis structural proteomics project (xmtb)
  Keywords: m. tuberculosis, chorismate synthase, structural genomics, tb structural genomics consortium, tbsgc, xmtb, mycobacterium tuberculosis structural proteomics project, lyase
  
• 2o15.pdb. transferase 28-nov-06 2o15
  Title: mycobacterium tuberculosis epsp synthase after partial products withdrawal
  Author: g. s. kachalova, h. d. bartunik, mycobacterium tuberculosis structural proteomics project (xmtb)
  Keywords: epsp synthase, m.tuberculosis, transferase, structural genomics, mycobacterium tuberculosis structural proteomics project, xmtb
  
• 2o2e.pdb. lyase 29-nov-06 2o2e
  Title: mycobacterium tuberculosis tryptophan synthase beta subunit dimer (apoform)
  Author: g. p. burenkov, g. s. kachalova, h. d. bartunik, mycobacterium tuberculosis structural proteomics project (xmtb)
  Keywords: tryptophan biosynthesis , structural genomics, mycobacterium tuberculosis structural proteomics project, xmtb, lyase
  
• 2o2j.pdb. lyase 29-nov-06 2o2j
  Title: mycobacterium tuberculosis tryptophan synthase beta chain dimer (apoform)
  Author: g. p. burenkov, g. s. kachalova, h. d. bartunik, mycobacterium tuberculosis structural proteomics project (xmtb)
  Keywords: tryptophan biosynthesis , structural genomics, mycobacterium tuberculosis structural proteomics project, xmtb, lyase
  
• 2oaw.pdb. structural protein 18-dec-06 2oaw Cl
  Title: structure of shh variant of "bergerac" chimera of spectrin sh3
  Author: a. g. gabdoulkhakov, l. v. gushchina, a. d. nikulin, s. v. nikonov, a. r. viguera, l. serrano, v. v. filimonov
  Keywords: chimera, structural protein
  
• 2opo.pdb. allergen 29-jan-07 2opo Ca
  Title: crystal structure of the calcium-binding pollen allergen che a 3
  Author: p. verdino, w. keller
  Keywords: dimer, domain-swapping, ef-hand, allergen
  
• 2ot4.pdb. oxidoreductase 07-feb-07 2ot4 He Hg Fe Ca
  Title: structure of a hexameric multiheme c nitrite reductase from the extremophile bacterium thiolkalivibrio nitratireducens
  Author: k. m. polyakov, k. m. boyko, a. slutsky, t. v. tikhonova, a. n. antipov, r. a. zvyagilskaya, a. n. popov, v. s. lamzin, g. p. bourenkov, v. o. popov
  Keywords: nrfa, sulfite reductase, oxidoreductase
  
• 2p58.pdb. transport protein/chaperone 14-mar-07 2p58 Se
  Title: structure of the yersinia pestis type iii secretion system needle protein yscf in complex with its chaperones ysce/yscg
  Author: p. sun, b. p. austin, j. e. tropea, d. s. waugh
  Keywords: structure, needle protein, ysce, yscf, yscg, transport protein/chaperone complex
  
• 2pcx.pdb. transcription 30-mar-07 2pcx Zn
  Title: crystal structure of p53dbd(r282q) at 1.54-angstrom resolution
  Author: c. tu, g. shaw, x. ji
  Keywords: p53 hotspots, p53 dna-binding domain, p53dbd, p53dbd(r282q), transcription
  
• 2pfc.pdb. unknown function 04-apr-07 2pfc
  Title: structure of mycobacterium tuberculosis rv0098
  Author: f. wang, j. c. sacchettini
  Keywords: thioesterase, virulence, unknown function
  
• 2ph3.pdb. oxidoreductase 10-apr-07 2ph3
  Title: crystal structure of 3-oxoacyl-[acyl carrier protein] reductase ttha0415 from thermus thermophilus
  Author: j. t. swindell ii, l. chen, j. zhu, a. ebihara, a. shinkai, s. kuramitsu, s. yokoyama, z-q. fu, j. chrzas, j. p. rose, b. c. wang, southeast collaboratory for structural genomics (secsg), riken structural genomics/proteomics initiative (rsgi)
  Keywords: oxidoreductase
  
• 2pr8.pdb. transferase 04-may-07 2pr8
  Title: crystal structure of aminoglycoside n-acetyltransferase aac(6')-ib11
  Author: f. maurice, i. broutin, i. podglajen, p. benas, e. collatz, f. dardel
  Keywords: aminoglycoside acetyltransferase,
  
• 2prb.pdb. transferase 04-may-07 2prb
  Title: crystal structure of aminoglycoside acetyltransferase aac(6')-ib in complex whith coenzyme a
  Author: f. maurice, i. broutin, i. podglajen, p. benas, e. collatz, f. dardel
  Keywords: aminoglycoside acetyltransferase
  
• 2pzh.pdb. hydrolase 18-may-07 2pzh
  Title: ybgc thioesterase (hp0496) from helicobacter pylori
  Author: a. angelini, l. cendron, s. goncalves, g. zanotti, l. terradot
  Keywords: acyl-coa, bacterial membrane, tol-pal system, thioesterase, hot-dog fold, hydrolase
  
• 2q18.pdb. lyase 24-may-07 2q18
  Title: 2-keto-3-deoxy-d-arabinonate dehydratase
  Author: t. barends, s. brouns, p. worm, j akerboom, a. turnbull, l. salmon
  Keywords: lyase
  
• 2q19.pdb. lyase 24-may-07 2q19
  Title: 2-keto-3-deoxy-d-arabinonate dehydratase apo form
  Author: t. barends, s. brouns, p. worm, j. akerboom, a. turnbull, l. salmon
  Keywords: lyase
  
• 2q1a.pdb. lyase 24-may-07 2q1a Mg
  Title: 2-keto-3-deoxy-d-arabinonate dehydratase complexed with magnesium and 2-oxobutyrate
  Author: t. barends, s. brouns, p. worm, j. akerboom, a. turnbull, l. salmon
  Keywords: lyase
  
• 2q1c.pdb. lyase 24-may-07 2q1c Ca
  Title: 2-keto-3-deoxy-d-arabinonate dehydratase complexed with calcium and 2-oxobutyrate
  Author: t. barends, s. brouns, p. worm, j. akerboom, a. turnbull, l. salmon
  Keywords: lyase
  
• 2q1d.pdb. lyase 24-may-07 2q1d Mg
  Title: 2-keto-3-deoxy-d-arabinonate dehydratase complexed with magnesium and 2,5-dioxopentanoate
  Author: t. barends, s. brouns, p. worm, j. akerboom, a. turnbull, l. salmon
  Keywords: lyase
  
• 2q1e.pdb. protein fibril 24-may-07 2q1e
  Title: altered dimer interface decreases stability in an amyloidogenic kappa1 bence jones protein.
  Author: j. r. thompson, m. ramirez-alvarado, e. m. baden
  Keywords: light chain amyloidosis, amyloid, immunoglobulin, light chain, light chain variable domain, protein fibril
  
• 2q20.pdb. protein fibril 25-may-07 2q20
  Title: structure of the germline vk1 o18/o8 light chain variable domain homodimer
  Author: j. r. thompson, m. ramirez-alvarado, e. m. baden
  Keywords: germline, al, light chain amyloidosis, amyloid, immunoglobulin, light chain, light chain variable domain, protein fibril
  
• 2q9o.pdb. oxidoreductase 13-jun-07 2q9o Cl Cu
  Title: near-atomic resolution structure of a melanocarpus albomyces laccase
  Author: n. hakulinen, j. rouvinen
  Keywords: multicopper oxidase, melanocarpus albomyces, 2- oxohistidine, oxidoreductase
  
• 2qa0.pdb. virus 14-jun-07 2qa0 Na
  Title: structure of adeno-associated virus serotype 8
  Author: h. -j. nam
  Keywords: icosahedral virus
  
• 2qir.pdb. transferase 05-jul-07 2qir
  Title: crystal structure of aminoglycoside acetyltransferase aac(6')-ib in complex whith coenzyme a and kanamycin
  Author: f. maurice, i. broutin, i. podglajen, p. benas, e. collatz, f. dardel
  Keywords: acetyltransferase
  
• 2qna.pdb. transport protein 18-jul-07 2qna
  Title: crystal structure of human importin-beta (127-876) in complex with the ibb-domain of snurportin1 (1-65)
  Author: d. wohlwend, a. strasser, a. dickmanns, r. ficner
  Keywords: import of spliceosomal subunits, protein- protein interaction, heat-repeat protein, acetylation, cytoplasm, host-virus interaction, nucleus, protein transport, rna-binding, transport protein
  
• 2qyk.pdb. hydrolase 15-aug-07 2qyk Mg Zn
  Title: crystal structure of pde4a10 in complex with inhibitor npv
  Author: h. wang, m. peng, y. chen, j. geng, h. robinson, m. houslay
  Keywords: subfamily inhibitor selectivity, hydrolase
  
• 2qyl.pdb. hydrolase 15-aug-07 2qyl Mg Zn
  Title: crystal structure of pde4b2b in complex with inhibitor npv
  Author: h. ke
  Keywords: selective inhibitor nvp, hydrolase
  
• 2qym.pdb. hydrolase 15-aug-07 2qym Mg Zn
  Title: crystal structure of unliganded pde4c2
  Author: h. ke
  Keywords: hydrolase
  
• 2qyn.pdb. hydrolase 15-aug-07 2qyn Mg Zn
  Title: crystal structure of pde4d2 in complex with inhibitor npv
  Author: h. ke
  Keywords: alternative splicing, camp, cytoplasm, cytoskeleton, hydrolase, membrane, metal-binding, phosphorylation
  
• 2qz6.pdb. hydrolase 16-aug-07 2qz6
  Title: first crystal structure of a psychrophile class c beta- lactamase
  Author: c. michaux, j. massant, f. kerff, p. charlier, j. wouters
  Keywords: psychrophile, cold adaptation, antibiotic resistance, hydrolase, periplasm
  
• 2qz9.pdb. oxidoreductase 16-aug-07 2qz9
  Title: crystal structure of aspartate semialdehyde dehydrogenase ii from vibrio cholerae
  Author: r. e. viola, x. liu, j. f. ohren, c. r. faehnle
  Keywords: oxidoreductase
  
• 2r00.pdb. oxidoreductase 17-aug-07 2r00
  Title: crystal structure of aspartate semialdehyde dehydrogenase ii complexed with asa from vibrio cholerae
  Author: r. e. viola, x. liu, j. f. ohren, c. r. faehnle
  Keywords: oxidoreductase
  
• 2r6w.pdb. transcription 06-sep-07 2r6w
  Title: estrogen receptor alpha ligand-binding domain complexed to a serm
  Author: y. wang
  Keywords: zinc-finger
  
• 2r6y.pdb. transcription 06-sep-07 2r6y
  Title: estrogen receptor alpha ligand-binding domain in complex with a serm
  Author: y. wang
  Keywords: zinc-finger
  
• 2rcf.pdb. structural protein 19-sep-07 2rcf Cl
  Title: carboxysome shell protein, orfa from h. neapolitanus
  Author: c. a. kerfeld, m. r. sawaya, t. o. yeates
  Keywords: structural protein
  
• 2rl5.pdb. transferase 18-oct-07 2rl5 Cl
  Title: crystal structure of the vegfr2 kinase domain in complex with a 2,3-dihydro-1,4-benzoxazine inhibitor
  Author: d. a. whittington, a. m. long, p. rose, h. zhao
  Keywords: transferase, transmembrane, tyrosine-protein kinase
  
• 2rmz.pdb. cell adhesion 04-dec-07 2rmz Hg (NMR, 21 structures)
  Title: bicelle-embedded integrin beta3 transmembrane segment
  Author: t. l. lau, a. w. partridge, m. h. ginsberg, t. s. ulmer
  Keywords: alternative splicing, cell adhesion, disease mutation, glycoprotein, host-virus interaction, integrin, phosphoprotein, polymorphism, receptor
  
• 2rn0.pdb. cell adhesion 04-dec-07 2rn0 Hg (NMR, 21 structures)
  Title: micelle-embedded integrin beta3 transmembrane segment
  Author: t. l. lau, a. w. partridge, m. h. ginsberg, t. s. ulmer
  Keywords: alternative splicing, cell adhesion, disease mutation, glycoprotein, host-virus interaction, integrin, phosphoprotein, polymorphism, receptor
  
• 2ro8.pdb. metal binding protein 14-mar-08 2ro8 He Hg Ca (NMR, 20 structures)
  Title: solution structure of calcium bound soybean calmodulin isoform 1 n-terminal domain
  Author: h. ishida, h. huang, a. p. yamniuk, y. takaya, h. j. vogel
  Keywords: plant calmodulin, calmodulin isoform, target binding, target regulation, calcium, metal binding protein
  
• 2ro9.pdb. metal binding protein 14-mar-08 2ro9 He Hg Ca (NMR, 20 structures)
  Title: solution structure of calcium bound soybean calmodulin isoform 1 c-terminal domain
  Author: h. ishida, h. huang, a. p. yamniuk, y. takaya, h. j. vogel
  Keywords: plant calmodulin, calmodulin isoform, target binding, target activation, acetylation, calcium, methylation, metal binding protein
  
• 2roa.pdb. metal binding protein 14-mar-08 2roa He Hg Ca (NMR, 20 structures)
  Title: solution structure of calcium bound soybean calmodulin isoform 4 n-terminal domain
  Author: h. ishida, h. huang, a. p. yamniuk, y. takaya, h. j. vogel
  Keywords: plant calmodulin, calmodulin isoform, target binding, target activation, calcium, metal binding protein
  
• 2rob.pdb. metal binding protein 14-mar-08 2rob He Hg Ca (NMR, 20 structures)
  Title: solution structure of calcium bound soybean calmodulin isoform 4 c-terminal domain
  Author: h. ishida, h. huang, a. p. yamniuk, y. takaya, h. j. vogel
  Keywords: plant calmodulin, calmodulin isoform, target binding, target activation, calcium, metal binding protein
  
• 2uu9.pdb. ribosome 02-mar-07 2uu9 Mg K Zn
  Title: structure of the thermus thermophilus 30s ribosomal subunit complexed with a valine-asl with cmo5u in position 34 bound to an mrna with a gug-codon in the a-site and paromomycin.
  Author: a. weixlbaumer, f. v. murphy, a. dziergowska, a. malkiewicz, f. a. p. vendeix, p. f. agris, v. ramakrishnan
  Keywords: rrna-binding, metal-binding, zinc-finger, translation, coiled coil, paromomycin, trna, zinc, mrna, cmo5u, ribosome, rna-binding, modifiactions, ribosomal protein, ribonucleoprotein
  
• 2v2g.pdb. oxidoreductase 05-jun-07 2v2g
  Title: crystal structure of the c45s mutant of the peroxiredoxin 6 of arenicola marina. monoclinic form
  Author: a. smeets, j. p. declercq
  Keywords: peroxiredoxins, antioxidant enzymes, arenicola marina, oxidoreductase
  
• 2v32.pdb. oxidoreductase 11-jun-07 2v32
  Title: crystal structure of the c45s mutant of the peroxiredoxin 6 of arenicola marina. monoclinic form 2
  Author: a. smeets, j. p. declercq
  Keywords: peroxiredoxins, antioxidant enzymes, arenicola marina, oxidoreductase
  
• 2v3f.pdb. hydrolase 17-jun-07 2v3f
  Title: acid-beta-glucosidase produced in carrot
  Author: y. shaaltiel, d. bartfeld, s. hashmueli, g. baum, e. brill-almon, g. galili, o. dym, s. a. boldin-adamsky, i. silman, j. l. sussman, a. h. futerman, d. aviezer
  Keywords: membrane, lysosome, hydrolase, glycosidase
  
• 2v41.pdb. oxidoreductase 27-jun-07 2v41
  Title: crystal structure of the c45s mutant of the peroxiredoxin 6 of arenicola marina. orthorhombic form
  Author: a. smeets, j. p. declercq
  Keywords: oxidoreductase, peroxiredoxins, arenicola marina
  
• 2v7y.pdb. chaperone 02-aug-07 2v7y Mg
  Title: crystal structure of the molecular chaperone dnak from geobacillus kaustophilus hta426 in post-atp hydrolysis state
  Author: y. -w. chang, y. -j. sun, c. wang, c. -d. hsiao
  Keywords: dnak, chaperone, heat shock protein, atpase, domain rearrangement
  
• 2v7z.pdb. chaperone 02-aug-07 2v7z
  Title: crystal structure of the 70-kda heat shock cognate protein from rattus norvegicus in post-atp hydrolysis state
  Author: y. -w. chang, y. -j. sun, c. wang, c. -d. hsiao
  Keywords: hsp70, hsc70, atpase, nucleus, chaperone, cytoplasm, nucleotide-binding, heat shock protein, atp-binding, phosphorylation, stress response
  
• 2vbi.pdb. lyase 14-sep-07 2vbi Mg
  Title: holostructure of pyruvate decarboxylase from acetobacter pasteurianus
  Author: d. gocke, c. l. berthold, g. schneider, m. pohl
  Keywords: pyruvate decarboxylase, lyase, pyruvate, flavoprotein, thdp-dependent enzyme
  
• 2vh3.pdb. unknown function 17-nov-07 2vh3 Zn
  Title: ranasmurfin
  Author: m. oke, r. y. ching, l. g. carter, k. a. johnson, h. liu, s. a. mcmahon, c. bloch jr, c. h. botting, m. a. walsh, a. a. latiff, m. w. kennedy, a. cooper, j. h. naismith
  Keywords: bisltq, unknown function
  
• 2vhs.pdb. hydrolase 24-nov-07 2vhs
  Title: cathsilicatein, a chimera
  Author: m. fairhead, t. kowatz, s. a. mcmahon, l. g. carter, m. oke, k. a. johnson, h. liu, j. h. naismith, c. f. v. d. wal
  Keywords: protease, lysosome, hydrolase, glycoprotein, thiol protease, silica condensation
  
• 2vi5.pdb. transferase 27-nov-07 2vi5 K
  Title: lumazine synthase from mycobacterium tuberculosis bound to n-6-(ribitylamino)pyrimidine-2,4(1h,3h)-dione-5-yl- propionamide
  Author: e. morgunova, y. zhang, g. jin, b. illarionov, a. bacher, m. fischer, m. cushman, r. ladenstein
  Keywords: lumazine synthase, riboflavin biosynthesis, mycobacterium tuberculosis
  
• 2vk5.pdb. hydrolase 17-dec-07 2vk5 Ca
  Title: the structure of clostridium perfringens nani sialidase and its catalytic intermediates
  Author: s. l. newstead, j. a. potter, j. c. wilson, g. xu, c. h. chien, a. g. watts, s. g. withers, g. l. taylor
  Keywords: sialidase, glycosidase, sialic acid, clostridium perfringens
  
• 2vk6.pdb. hydrolase 17-dec-07 2vk6 Mg Ca
  Title: the structure of clostridium perfringens nani sialidase and its catalytic intermediates
  Author: s. l. newstead, j. a. potter, j. c. wilson, g. xu, c. h. chien, a. g. watts, s. g. withers, g. l. taylor
  Keywords: sialidase, glycosidase, sialic acid, clostridium perfringens
  
• 2vk7.pdb. hydrolase 17-dec-07 2vk7 F Ca
  Title: the structure of clostridium perfringens nani sialidase and its catalytic intermediates
  Author: s. l. newstead, j. a. potter, j. c. wilson, g. xu, c. h. chien, a. g. watts, s. g. withers, g. l. taylor
  Keywords: sialidase, glycosidase, sialic acid, clostridium perfringens
  
• 2vk9.pdb. toxin 18-dec-07 2vk9
  Title: crystal structure of the catalytic domain of alpha-toxin from clostridium novyi
  Author: m. o. p. ziegler, t. jank, k. aktories, g. e. schulz
  Keywords: glycosyltransferase
  
• 2vkd.pdb. toxin 18-dec-07 2vkd Mn
  Title: crystal structure of the catalytic domain of lethal toxin from clostridium sordellii in complex with udp-glc and manganese ion
  Author: m. o. p. ziegler, t. jank, k. aktories, g. e. schulz
  Keywords: glycosyltransferase
  
• 2vkh.pdb. toxin 19-dec-07 2vkh Ca
  Title: crystal structure of the catalytic domain of lethal toxin from clostridium sordellii in complex with udp-glc and calcium ion
  Author: m. o. p. ziegler, t. jank, k. aktories, g. e. schulz
  Keywords: glycosyltransferase
  
• 2vkj.pdb. membrane protein 19-dec-07 2vkj
  Title: structure of the soluble domain of the membrane protein tm1634 from thermotoga maritima
  Author: c. j. mccleverty, l. columbus, a. kreusch, s. a. lesley, joint center for structural genomics (jcsg)
  Keywords: x-ray, tpr motif, thermotoga maritima, sad, joint center for structural genomics, jcsg, structural genomics
  
• 2vko.pdb. membrane protein 20-dec-07 2vko
  Title: structure of the soluble domain of the membrane protein tm1634 from thermotoga maritima
  Author: c. j. mccleverty, l. columbus, a. kreusch, s. a. lesley, joint center for structural genomics (jcsg)
  Keywords: tpr motif, membrane protein, thermotoga maritima, structural genomics, jcsg, joint center for structural genomics
  
• 2vlg.pdb. transferase 14-jan-08 2vlg Cl
  Title: kina pas-a domain, homodimer
  Author: j. lee, d. r. tomchick, c. a. brautigam, m. machius, r. kort, k. j. hellingwerf, k. h. gardner
  Keywords: two-component regulatory system, two-component signal transduction, transferase, sporulation, phosphorylation, scod, scob, gsic, spoiij, kinase, spoiif, pas domain
  
• 2vls.pdb. cell cycle 16-jan-08 2vls
  Title: structure of the hsp90 inhibitor macbecin bound to the n- terminus of yeast hsp90.
  Author: s. m. roe, c. prodromou, l. h. pearl
  Keywords: chaperone-complex, cell cycle, chaperone, cytoplasm, inhibitor, heat shock, atp-binding, stress response, multigene family, nucleotide-binding
  
• 2vm4.pdb. oxidoreductase 22-jan-08 2vm4 Cu Zn
  Title: structure of alcaligenes xylosoxidans nitrite reductase in space group r3 - 2 of 2
  Author: m. a. hough, s. v. antonyuk, r. w. strange, r. r. eady, s. s. hasnain
  Keywords: nitrite reductase, oxidoreductase, ordered mechanism
  
• 2vnu.pdb. hydrolase 07-feb-08 2vnu Mg Na Se
  Title: crystal structure of sc rrp44
  Author: e. lorentzen, j. basquin, e. conti
  Keywords: rna degradation, cytoplasm, rna-binding, exonuclease, rna processing, rrp44, dis3p, exosome, nucleus, nuclease, hydrolase
  
• 2vnv.pdb. sugar-binding protein 07-feb-08 2vnv Ca
  Title: crystal structure of bcla lectin from burkholderia cenocepacia in complex with alpha-methyl-mannoside at 1.7 angstrom resolution
  Author: e. lameignere, l. malinovska, e. p. mitchell, a. imberty, m. wimmerova
  Keywords: protein sugar interaction, sugar-binding protein lectin, burkholderia cenocepacia
  
• 2vnw.pdb. transferase 08-feb-08 2vnw
  Title: structure of pka-pkb chimera complexed with (1-(9h-purin-6- yl)piperidin-4-yl)methanamine
  Author: j. j. caldwell, t. g. davies, a. donald, t. mchardy, m. g. rowlands, g. w. aherne, l. k. hunter, k. taylor, r. ruddle, f. i. raynaud, m. verdonk, p. workman, m. d. garrett, i. collins
  Keywords: lipoprotein, atp-binding, phosphoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, camp, kinase, nucleus, myristate, cytoplasm
  
• 2vnx.pdb. oxidoreductase 08-feb-08 2vnx Na Fe
  Title: crystal structure of soybean ascorbate peroxidase mutant w41a after exposure to a high dose of x-rays
  Author: c. l. metcalfe, s. k. badyal, e. l. raven, p. c. e. moody
  Keywords: peroxidase, heme enzyme, oxidoreductase, reduction by x-rays
  
• 2vny.pdb. transferase 08-feb-08 2vny
  Title: structure of pka-pkb chimera complexed with (1-(9h-purin-6- yl)piperidin-4-yl)amine
  Author: j. j. caldwell, t. g. davies, a. donald, t. mchardy, m. g. rowlands, g. w. aherne, l. k. hunter, k. taylor, r. ruddle, f. i. raynaud, m. verdonk, p. workman, m. d. garrett, i. collins
  Keywords: lipoprotein, atp-binding, phosphoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, camp, kinase, nucleus, myristate, cytoplasm
  
• 2vnz.pdb. oxidoreductase 08-feb-08 2vnz Na Fe
  Title: crystal structure of dithinonite reduced soybean ascorbate peroxidase mutant w41a.
  Author: c. l. metcalfe, s. k. badyal, e. l. raven, p. c. e. moody
  Keywords: peroxidase, heme enzyme, oxidoreductase, dithionite reduction
  
• 2vo0.pdb. transferase 08-feb-08 2vo0 Cl
  Title: structure of pka-pkb chimera complexed with c-(4-(4- chlorophenyl)-1-(7h-pyrrolo(2,3-d)pyrimidin-4-yl)piperidin- 4-yl)methylamine
  Author: j. j. caldwell, t. g. davies, a. donald, t. mchardy, m. g. rowlands, g. w. aherne, l. k. hunter, k. taylor, r. ruddle, f. i. raynaud, m. verdonk, p. workman, m. d. garrett, i. collins
  Keywords: lipoprotein, atp-binding, phosphoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, camp, kinase, nucleus, myristate, cytoplasm
  
• 2vo2.pdb. oxidoreductase 08-feb-08 2vo2 Na Fe
  Title: crystal structure of soybean ascorbate peroxidase mutant w41a subjected to low dose x-rays
  Author: c. l. metcalfe, s. k. badyal, e. l. raven, p. c. e. moody
  Keywords: peroxidase, heme enzyme, oxidoreductase, dithionite reduction
  
• 2vo3.pdb. transferase 08-feb-08 2vo3 Cl
  Title: structure of pka-pkb chimera complexed with c-(4-(4- chlorophenyl)-1-(7h-pyrrolo(2,3-d)pyrimidin-4-yl)piperidin- 4-yl)methylamine
  Author: j. j. caldwell, t. g. davies, a. donald, t. mchardy, m. g. rowlands, g. w. aherne, l. k. hunter, k. taylor, r. ruddle, f. i. raynaud, m. verdonk, p. workman, m. d. garrett, i. collins
  Keywords: lipoprotein, atp-binding, phosphoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, camp, kinase, nucleus, myristate, cytoplasm
  
• 2vo6.pdb. transferase 08-feb-08 2vo6 Cl
  Title: structure of pka-pkb chimera complexed with 4-(4- chlorobenzyl)-1-(7h-pyrrolo(2,3-d)pyrimidin-4-yl)piperidin- 4-ylamine
  Author: j. j. caldwell, t. g. davies, a. donald, t. mchardy, m. g. rowlands, g. w. aherne, l. k. hunter, k. taylor, r. ruddle, f. i. raynaud, m. verdonk, p. workman, m. d. garrett, i. collins
  Keywords: lipoprotein, atp-binding, phosphoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, camp, kinase, nucleus, myristate, cytoplasm
  
• 2vo7.pdb. transferase 08-feb-08 2vo7 Cl
  Title: structure of pka complexed with 4-(4-chlorobenzyl)-1-(7h- pyrrolo(2,3-d)pyrimidin-4-yl)piperidin-4-ylamine
  Author: j. j. caldwell, t. g. davies, a. donald, t. mchardy, m. g. rowlands, g. w. aherne, l. k. hunter, k. taylor, r. ruddle, f. i. raynaud, m. verdonk, p. workman, m. d. garrett, i. collins
  Keywords: lipoprotein, atp-binding, phosphoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, camp, kinase, nucleus, myristate, cytoplasm
  
• 2vol.pdb. immune system 19-feb-08 2vol
  Title: murine trim21 in complex with murine igg fc
  Author: a. h. keeble, z. khan, a. forster, l. c. james
  Keywords: polymorphism, metal-binding, ribonucleoprotein, systemic lupus erythematosus
  
• 2vqt.pdb. hydrolase 18-mar-08 2vqt Cl Br
  Title: structural and biochemical evidence for a boat-like transition state in beta-mannosidases
  Author: l. n. tailford, w. a. offen, n. smith, c. dumon, c. moreland, j. gratien, m. heck, r. v. stick, y. bleriot, a. vasella, h. j. gilbert, g. j. davies
  Keywords: transition state mimic, hydrolase, mannosidase, glycoside hydrolase
  
• 2vr4.pdb. hydrolase 25-mar-08 2vr4 Cl Br
  Title: transition-state mimicry in mannoside hydrolysis: characterisation of twenty six inhibitors and insight into binding from linear free energy relationships and 3-d structure
  Author: l. n. tailford, w. a. offen, n. smith, c. dumon, c. moreland, j. gratien, m. heck, r. v. stick, y. bleriot, a. vasella, h. j. gilbert, g. j. davies
  Keywords: hydrolase, transition state mimic, mannosidase, glycoside hydrolase
  
• 2vr8.pdb. oxidoreductase 28-mar-08 2vr8 Cu Zn
  Title: crystal structure of g85r als mutant of human cu,zn superoxide dismutase (cuznsod) at 1.36 a resolution
  Author: s. antonyuk, x. cao, s. v. seetharaman, l. j. whitson, a. b. taylor, s. p. holloway, r. w. strange, p. a. doucette, a. tiwari, l. j. hayward, s. padua, j. a. cohlberg, j. selverstone valentine, s. s. hasnain, p. j. hart
  Keywords: copper, human cu, cytoplasm, acetylation, ubl conjugation, disease mutation, zn superoxide dismutase, amyotrophic lateral sclerosis, antioxidant, metal-binding, oxidoreductase
  
• 2vr9.pdb. cell adhesion 28-mar-08 2vr9
  Title: drosophila robo ig1-2 (tetragonal form)
  Author: n. fukuhara, j. a. howitt, s. hussain, e. hohenester
  Keywords: axon guidance, cell adhesion, immunoglobulin domain
  
• 2vra.pdb. cell adhesion 28-mar-08 2vra
  Title: drosophila robo ig1-2 (monoclinic form)
  Author: n. fukuhara, j. a. howitt, s. hussain, e. hohenester
  Keywords: axon guidance, cell adhesion, immunoglobulin domain
  
• 2vrd.pdb. nuclear protein 31-mar-08 2vrd He Hg Zn (NMR, 47 structures)
  Title: the structure of the zinc finger from the human spliceosomal protein u1c
  Author: y. muto, d. pomeranz-krummel, c. oubridge, h. hernandez, c. robinson, d. neuhaus, k. nagai
  Keywords: nucleus, u1 snrnp, rna-binding
  
• 2yrt.pdb. transcription 03-apr-07 2yrt He Hg Zn (NMR, 20 structures)
  Title: solution structure of the chord domain of human chord- containing protein 1
  Author: n. nameki, k. saito, s. koshiba, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, transcription
  
• 2yru.pdb. apoptosis 03-apr-07 2yru He Hg (NMR, 20 structures)
  Title: solution structure of mouse steroid receptor rna activator 1 (sra1) protein
  Author: n. nameki, k. saito, s. koshiba, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, apoptosis
  
• 2yrv.pdb. transcription 03-apr-07 2yrv He Hg (NMR, 20 structures)
  Title: solution structure of the rbb1nt domain of human rb(retinoblastoma)-binding protein 1
  Author: n. nameki, k. saito, s. koshiba, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: transcription
  
• 2yrz.pdb. cell adhesion 03-apr-07 2yrz He Hg (NMR, 20 structures)
  Title: solution structure of the fibronectin type iii domain of human integrin beta-4
  Author: h. abe, a. sasagawa, n. tochio, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: cd104 antigen, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, cell adhesion
  
• 2ys1.pdb. signaling protein 03-apr-07 2ys1 He Hg (NMR, 20 structures)
  Title: solution structure of the ph domain of dynamin-2 from human
  Author: h. li, m. sato, n. tochio, s. koshiba, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dynamin 2, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2ys4.pdb. structural genomics, unknown function 03-apr-07 2ys4 He Hg (NMR, 20 structures)
  Title: solution structure of the n-terminal papd-like domain of hydin protein from human
  Author: h. li, t. tomizawa, s. koshiba, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: papd-like, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, structural genomics, unknown function
  
• 2ys5.pdb. signaling protein 03-apr-07 2ys5 He Hg (NMR, 20 structures)
  Title: solution structure of the complex of the ptb domain of snt- 2 and 19-residue peptide (aa 1571-1589) of halk
  Author: h. li, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: snt-2, ptb domain, halk, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2ysc.pdb. protein binding 03-apr-07 2ysc He Hg (NMR, 20 structures)
  Title: solution structure of the ww domain from the human amyloid beta a4 precursor protein-binding family b member 3, apbb3
  Author: s. ohnishi, m. yoneyama, s. koshiba, t. harada, s. watanabe, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: ww domain, nmr, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, protein binding
  
• 2ysk.pdb. structural genomics, unknown function 03-apr-07 2ysk
  Title: crystal structure of a hypothetical protein ttha1432 from thermus thermophilus
  Author: a. okamoto, s. yokoyama, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, structural genomics, unknown function
  
• 2yss.pdb. immune system/hydrolase 03-apr-07 2yss
  Title: crystal structure of humanized hyhel-10 fv mutant(hq39kw47y)-hen lysozyme complex
  Author: t. nakanishi, k. tsumoto, a. yokota, h. kondo, i. kumagai
  Keywords: hydrolase, immune system/hydrolase complex
  
• 2ysx.pdb. signaling protein 04-apr-07 2ysx He Hg (NMR, 20 structures)
  Title: solution structure of the human ship sh2 domain
  Author: t. kasai, s. koshiba, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2ysz.pdb. protein binding 05-apr-07 2ysz He Hg (NMR, 20 structures)
  Title: solution structure of the chimera of the c-terminal pid domain of fe65l and the c-terminal tail peptide of app
  Author: h. li, s. koshiba, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: protein binding
  
• 2yt0.pdb. protein binding 05-apr-07 2yt0 He Hg (NMR, 20 structures)
  Title: solution structure of the chimera of the c-terminal tail peptide of app and the c-terminal pid domain of fe65l
  Author: h. li, s. koshiba, n. tochio, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: protein binding
  
• 2yt1.pdb. protein binding 05-apr-07 2yt1 He Hg (NMR, 20 structures)
  Title: solution structure of the chimera of the c-terminal tail peptide of app and the c-terminal pid domain of fe65l
  Author: h. li, s. koshiba, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: protein binding
  
• 2yt2.pdb. signaling protein 05-apr-07 2yt2 He Hg (NMR, 20 structures)
  Title: solution structure of the chimera of the ptb domain of snt- 2 and 19-residue peptide (aa 1571-1589) of halk
  Author: h. li, s. koshiba, t. tomizawa, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: snt-2, ptb domain, halk, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2yt6.pdb. cell cycle 05-apr-07 2yt6 He Hg (NMR, 20 structures)
  Title: solution structure of the sh3_1 domain of yamaguchi sarcoma viral (v-yes) oncogene homolog 1
  Author: w. dang, y. muto, m. inoue, t. kigawa, m. shirouzu, t. tarada, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, cell cycle
  
• 2yt8.pdb. protein transport 05-apr-07 2yt8 He Hg (NMR, 20 structures)
  Title: solution structure of the pdz domain of amyloid beta a4 precursor protein-binding family a member 3 (neuron- specific x11l2 protein) (neuronal munc18-1-interacting protein 3) (mint-3) (adapter protein x11gamma)
  Author: w. dang, y. muto, m. inoue, t. kigawa, m. shirouzu, t. tarada, m. seiki, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structure genomics, pdz domain, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, protein transport
  
• 2ytu.pdb. signaling protein 05-apr-07 2ytu He Hg (NMR, 20 structures)
  Title: solution structure of the sam_pnt-domain of the human friend leukemiaintegration 1 transcription factor
  Author: a. k. goroncy, m. sato, n. tochio, s. koshiba, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: protein regulation, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2ytv.pdb. rna binding protein 05-apr-07 2ytv He Hg (NMR, 20 structures)
  Title: solution structure of the fifth cold-shock domain of the human kiaa0885 protein (unr protein)
  Author: a. k. goroncy, n. tochio, t. tomizawa, s. koshiba, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, rna binding protein
  
• 2ytw.pdb. structural protein 05-apr-07 2ytw He Hg (NMR, 20 structures)
  Title: solution structure of the pdz-domain of human protease htra 1 precursor
  Author: a. k. goroncy, k. saito, s. koshiba, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural protein
  
• 2ytx.pdb. rna binding protein 05-apr-07 2ytx He Hg (NMR, 20 structures)
  Title: solution structure of the second cold-shock domain of the human kiaa0885 protein (unr protein)
  Author: a. k. goroncy, t. tomizawa, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, rna binding protein
  
• 2yty.pdb. rna binding protein 05-apr-07 2yty Hg (NMR, 20 structures)
  Title: solution structure of the fourth cold-shock domain of the human kiaa0885 protein (unr protein)
  Author: a. k. goroncy, t. tomizawa, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, rna binding protein
  
• 2yub.pdb. transferase 06-apr-07 2yub He Hg (NMR, 20 structures)
  Title: solution structure of the pdz domain from mouse lim domain kinase
  Author: f. hayashi, t. suetake, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: limk-2, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, transferase
  
• 2yuc.pdb. signaling protein 06-apr-07 2yuc He Hg Zn (NMR, 20 structures)
  Title: solution structure of the traf-type zinc finger domains (102-164) from human tnf receptor associated factor 4
  Author: f. hayashi, t. suetake, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2yuf.pdb. transcription 06-apr-07 2yuf He Hg (NMR, 20 structures)
  Title: solution structure of the ncd2 domain in human transcriptional repressor nab1 protein
  Author: k. saito, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2yuk.pdb. transferase 06-apr-07 2yuk He Hg (NMR, 20 structures)
  Title: solution structure of the hmg box of human myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog
  Author: h. abe, n. tochio, k. miyamoto, s. koshiba, t. harada, s. watanabe, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: h3 lysine-4 specific mll3, homologous to alr protein, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsg...
  
• 2yul.pdb. transcription 06-apr-07 2yul He Hg (NMR, 20 structures)
  Title: solution structure of the hmg box of human transcription factor sox-17
  Author: h. abe, n. tochio, k. miyamoto, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2yur.pdb. protein binding 06-apr-07 2yur He Hg Zn (NMR, 20 structures)
  Title: solution structure of the ring finger of human retinoblastoma-binding protein 6
  Author: h. abe, k. miyamoto, n. tochio, t. tomizawa, s. koshiba, t. harada, s. watanabe, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, protein binding
  
• 2yus.pdb. transcription 06-apr-07 2yus He Hg (NMR, 20 structures)
  Title: solution structure of the sant domain of human swi/snf- related matrix-associated actin-dependent regulator of chromatin subfamily c member 1
  Author: n. tochio, s. koshiba, k. satio, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: brg1-associated factor 155, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, transcription
  
• 2yuu.pdb. transferase 06-apr-07 2yuu He Hg Zn (NMR, 20 structures)
  Title: solution structure of the first phorbol esters/diacylglycerol binding domain of human protein kinase c, delta
  Author: h. abe, k. miyamoto, n. tochio, k. saito, a. sasagawa, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, transferase
  
• 2yuv.pdb. cell adhesion 06-apr-07 2yuv He Hg (NMR, 20 structures)
  Title: solution structure of 2nd immunoglobulin domain of slow type myosin-binding protein c
  Author: t. n. niraula, n. tochio, s. koshiba, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: immunoglobulin domain, nmr, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, cell adhesion
  
• 2yuw.pdb. cell adhesion 06-apr-07 2yuw He Hg (NMR, 20 structures)
  Title: solution structure of 2nd fibronectin domain of slow type myosin-binding protein c
  Author: t. n. niraula, s. koshiba, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: cell adhesion
  
• 2yux.pdb. cell adhesion 06-apr-07 2yux He Hg (NMR, 20 structures)
  Title: solution structure of 3rd fibronectin type three domain of slow type myosin-binding protein c
  Author: t. n. niraula, n. tochio, s. koshiba, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: cell adhesion
  
• 2yuy.pdb. signaling protein 06-apr-07 2yuy He Hg (NMR, 20 structures)
  Title: solution structure of pdz domain of rho gtpase activating protein 21
  Author: t. n. niraula, m. yoneyama, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: signaling protein
  
• 2yuz.pdb. immune system 06-apr-07 2yuz He Hg (NMR, 20 structures)
  Title: solution structure of 4th immunoglobulin domain of slow type myosin-binding protein c
  Author: t. n. niraula, n. tochio, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: slow-type myosin-binding protein c, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, immune system
  
• 2yx9.pdb. oxidoreductase 25-apr-07 2yx9 Cu
  Title: crystal structure of d298k copper amine oxidase from arthrobacter globiformis
  Author: t. murakawa, t. okajima, h. yamaguchi, k. tanizawa
  Keywords: lysine tyrosylquinone, tpq, ltq, cofactor, biogenesis, copper, oxidoreductase
  
• 2yyf.pdb. toxin 29-apr-07 2yyf Hg (NMR, 20 structures)
  Title: purification and structural characterization of a d-amino acid containing conopeptide, marmophine, from conus marmoreus
  Author: f. huang, w. du, y. han, c. wang
  Keywords: mr1931, nmr
  
• 2z41.pdb. hydrolase 12-jun-07 2z41 Mg
  Title: crystal structure analysis of the ski2-type rna helicase
  Author: t. nakashima, x. zhang, y. kakuta, m. yao, i. tanaka, m. kimura
  Keywords: dna helicase, hydrolase
  
• 2z4r.pdb. dna binding protein 25-jun-07 2z4r Mg
  Title: crystal structure of domain iii from the thermotoga maritima replication initiation protein dnaa
  Author: n. fujikawa, s. ozaki, w. kagawa, s. -y. park, t. katayama, h. kurumizaka, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2z4s.pdb. dna binding protein 25-jun-07 2z4s Mg
  Title: crystal structure of domain iii from the thermotoga maritima replication initiation protein dnaa
  Author: n. fujikawa, s. ozaki, w. kagawa, s. -y. park, t. katayama, h. kurumizaka, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2z4t.pdb. transferase 25-jun-07 2z4t Mg
  Title: crystal structure of vibrionaceae photobacterium sp. jt-ish- 224 2,6-sialyltransferase in a ternary complex with donor product cmp and accepter substrate lactose
  Author: y. kakuta, n. okino, h. kajiwara, m. ichikawa, y. takakura, m. ito, t. yamamoto
  Keywords: immunoglobulin-like beta-sandwich fold, glycosyltransferase, transferase
  
• 2zad.pdb. isomerase 03-oct-07 2zad Mn Se
  Title: crystal structure of muconate cycloisomerase from thermotoga maritima msb8
  Author: b. padmanabhan, y. bessho, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: tm0006, isomerase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2zbk.pdb. isomerase 22-oct-07 2zbk Cl
  Title: crystal structure of an intact type ii dna topoisomerase: insights into dna transfer mechanisms
  Author: m. graille, l. cladiere, d. durand, f. lecointe, p. forterre, h. van tilbeurgh, paris-sud yeast structural genomics (ysg)
  Keywords: dna binding protein, decatenation, atpase, drug design, dna-binding, magnesium, metal-binding, atp-binding, nucleotide-binding, structural genomics, paris- sud yeast structural genomics, ysg
  
• 2zbl.pdb. isomerase 24-oct-07 2zbl
  Title: functional annotation of salmonella enterica yihs-encoded protein
  Author: t. itoh, b. mikami, w. hashimoto, k. murata
  Keywords: isomerase
  
• 2zbx.pdb. oxidoreductase 30-oct-07 2zbx Fe
  Title: crystal structure of vitamin d hydroxylase cytochrome p450 105a1 (wild type) with imidazole bound
  Author: h. sugimoto, r. shinkyo, k. hayashi, s. yoneda, m. yamada, m. kamakura, s. ikushiro, y. shiro, t. sakaki
  Keywords: beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase
  
• 2zby.pdb. oxidoreductase 30-oct-07 2zby Fe
  Title: crystal structure of vitamin d hydroxylase cytochrome p450 105a1 (r84a mutant)
  Author: h. sugimoto, r. shinkyo, k. hayashi, s. yoneda, m. yamada, m. kamakura, s. ikushiro, y. shiro, t. sakaki
  Keywords: beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase
  
• 2zbz.pdb. oxidoreductase 30-oct-07 2zbz Fe
  Title: crystal structure of vitamin d hydroxylase cytochrome p450 105a1 (r84a mutant) in complex with 1,25-dihydroxyvitamin d3
  Author: h. sugimoto, r. shinkyo, k. hayashi, s. yoneda, m. yamada, m. kamakura, s. ikushiro, y. shiro, t. sakaki
  Keywords: beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase
  
• 2zc3.pdb. biosynthetic protein 02-nov-07 2zc3
  Title: penicillin-binding protein 2x (pbp 2x) acyl-enzyme complex (biapenem) from streptococcus pneumoniae
  Author: m. yamada, t. watanabe, y. takeuchi
  Keywords: biosynthetic protein
  
• 2zc4.pdb. biosynthetic protein 02-nov-07 2zc4
  Title: penicillin-binding protein 2x (pbp 2x) acyl-enzyme complex (tebipenem) from streptococcus pneumoniae
  Author: m. yamada, t. watanabe, y. takeuchi
  Keywords: biosynthetic protein
  
• 2zc5.pdb. biosynthetic protein 02-nov-07 2zc5 Zn
  Title: penicillin-binding protein 1a (pbp 1a) acyl-enzyme complex (biapenem) from streptococcus pneumoniae
  Author: m. yamada, t. watanabe, y. takeuchi
  Keywords: cell wall, penicillin-binding, antibiotics, biapenem, antibiotic resistance, cell shape, cell wall biogenesis/degradation, multifunctional enzyme, secreted, biosynthetic protein
  
• 2zc6.pdb. biosynthetic protein 02-nov-07 2zc6 Zn
  Title: penicillin-binding protein 1a (pbp 1a) acyl-enzyme complex (tebipenem) from streptococcus pneumoniae
  Author: m. yamada, t. watanabe, y. takeuchi
  Keywords: cell wall, penicillin-binding, antibiotics, tebipenem, antibiotic resistance, cell shape, cell wall biogenesis/degradation, multifunctional enzyme, secreted, biosynthetic protein
  
• 2zcm.pdb. transcription 10-nov-07 2zcm Se
  Title: crystal structure of icar, a repressor of the tetr family
  Author: w. y. jeng, t. p. ko, c. i. liu, r. t. guo, h. l. shr, a. h. j. wang
  Keywords: biofilm, tetr family, repressor, polysaccharide intercellular adhesin (pia), dna-binding, transcription, transcription regulation
  
• 2zcn.pdb. transcription 10-nov-07 2zcn
  Title: crystal structure of icar, a repressor of the tetr family
  Author: w. y. jeng, t. p. ko, c. i. liu, r. t. guo, c. l. liu, a. h. j. wang
  Keywords: biofilm, tetr family, repressor, polysaccharide intercellular adhesin (pia), dna-binding, transcription, transcription regulation
  
• 2zcy.pdb. hydrolase 15-nov-07 2zcy
  Title: yeast 20s proteasome:syringolin a-complex
  Author: m. groll, r. dudler, r. kaiser
  Keywords: cytoplasm, hydrolase, nucleus, protease, proteasome, threonine protease, ubl conjugation, phosphoprotein, zymogen
  
• 2zju.pdb. signaling protein 10-mar-08 2zju Cl
  Title: crystal structure of lymnaea stagnalis acetylcholine binding protein (ls-achbp) complexed with imidacloprid
  Author: t. okajima, m. ihara, a. yamashita, t. oda, t. morimoto, k. matsuda
  Keywords: neonicotinoids, nicotinic acetylcholine receptor, imidacloprid, cell junction, glycoprotein, immunoglobulin domain, secreted, synapse, signaling protein
  
• 2zjv.pdb. signaling protein 10-mar-08 2zjv Cl
  Title: crystal structure of lymnaea stagnalis acetylcholine binding protein (ls-achbp) complexed with clothianidin
  Author: t. okajima, m. ihara, a. yamashita, t. oda, t. morimoto, k. matsuda
  Keywords: neonicotinoids, nicotinic acetylcholine receptor, clothianidin, cell junction, glycoprotein, immunoglobulin domain, secreted, synapse, signaling protein
  
• 3b42.pdb. signaling protein 23-oct-07 3b42 Fe
  Title: periplasmic sensor domain of chemotaxis protein gsu0935
  Author: p. r. pokkuluri, m schiffer
  Keywords: pas domain, c-type heme containing sensor, geobacter sulfurreducens, unknown function, signaling protein
  
• 3b47.pdb. signaling protein 23-oct-07 3b47 Fe
  Title: periplasmic sensor domain of chemotaxis protein gsu0582
  Author: p. r. pokkuluri, m. schiffer
  Keywords: pas domain, c-type heme containing sensor, geobacter sulfurreducens, unknown function, signaling protein
  
• 3b4d.pdb. rna binding protein 24-oct-07 3b4d
  Title: crystal structure of human pabpn1 rrm
  Author: h. ge, s. tong, m. teng, l. niu
  Keywords: polymorphism, rna-binding, triplet repeat expansion, rna binding protein
  
• 3b4m.pdb. rna binding protein 24-oct-07 3b4m
  Title: crystal structure of human pabpn1 rrm
  Author: h. ge, d. zhou, m. teng, l. niu
  Keywords: polymorphism, rna-binding, triplet repeat expansion, rna binding protein
  
• 3b98.pdb. isomerase 03-nov-07 3b98 Fe
  Title: crystal structure of zebrafish prostacyclin synthase (cytochrome p450 8a1)
  Author: y. -c. li, c. -w. chiang, h. -c. yeh, p. -y. hsu, f. g. whitby, l. -h. wang, n. -l. chan
  Keywords: cytochrome p450 8a1, cyp8a1, isomerase
  
• 3b99.pdb. isomerase 03-nov-07 3b99 Fe
  Title: crystal structure of zebrafish prostacyclin synthase (cytochrome p450 8a1) in complex with substrate analog u51605
  Author: y. -c. li, c. -w. chiang, h. -c. yeh, p. -y. hsu, f. g. whitby, l. -h. wang, n. -l. chan
  Keywords: cytochrome p450 8a1, cyp8a1, substrate analog-enzyme complex, isomerase
  
• 3bcj.pdb. oxidoreductase 13-nov-07 3bcj F
  Title: crystal structure of aldose reductase complexed with 2s4r (stereoisomer of fidarestat, 2s4s) at 0.78 a
  Author: h. t. zhao, o. el-kabbani
  Keywords: diabetes, drug design, polyl pathway, acetylation, cataract, cytoplasm, nadp, oxidoreductase, polymorphism
  
• 3bdm.pdb. hydrolase 15-nov-07 3bdm
  Title: yeast 20s proteasome:glidobactin a-complex
  Author: m. groll, r. dudler, r. kaiser
  Keywords: ubiquitin, proteolysis, pathogen, virulence factor, cytoplasm, hydrolase, nucleus, protease, threonine protease, ubl conjugation, phosphoprotein, zymogen
  
• 3be2.pdb. transferase 16-nov-07 3be2 F
  Title: crystal structure of the vegfr2 kinase domain in complex with a benzamide inhibitor
  Author: d. a. whittington, j. l. kim, a. m. long, y. gu, p. rose, h. zhao
  Keywords: transferase, transmembrane, tyrosine-protein kinase
  
• 3beg.pdb. transferase/splicing 18-nov-07 3beg
  Title: crystal structure of sr protein kinase 1 complexed to its substrate asf/sf2
  Author: j. c. ngo, k. giang, s. chakrabarti, c. -t. ma, n. huynh, j. hagopian, p. c. dorrestein, x. -d. fu, j. a. adams, g. ghosh
  Keywords: serine/threonine-protein kinase, transferase, acetylation, methylation, polymorphism, rna-binding, spliceosome, transferase/splicing complex
  
• 3bp9.pdb. viral protein 18-dec-07 3bp9
  Title: structure of b-tropic mlv capsid n-terminal domain
  Author: m. b. gulnahar, m. p. dodding, d. c. goldstone, l. f. haire, j. p. stoye, i. a. taylor
  Keywords: hexamer, mlv, metal-binding, zinc, zinc-finger, viral protein
  
• 3bq0.pdb. transferase/dna 19-dec-07 3bq0 Ca
  Title: pre-insertion binary complex of dbh dna polymerase
  Author: j. d. pata, r. c. wilson
  Keywords: nucleotidyltransferase, transferase, transferase/dna
  
• 3bq1.pdb. transferase/dna 19-dec-07 3bq1 Ca
  Title: insertion ternary complex of dbh dna polymerase
  Author: j. d. pata, r. c. wilson
  Keywords: nucleotidyltransferase, transferase, transferase/dna complex
  
• 3bq2.pdb. transferase/dna 19-dec-07 3bq2 Ca
  Title: post-insertion binary complex of dbh dna polymerase
  Author: j. d. pata, r. c. wilson
  Keywords: nucleotidyltransferase, transferase, transferase/dna complex
  
• 3bqb.pdb. lyase 20-dec-07 3bqb Mg
  Title: hexagonal kristal form of 2-keto-3-deoxyarabinonate dehydratase
  Author: t. m. barends, s. brouns, p. worm, j. akerboom, a. turnbull, l. salmon
  Keywords: lyase
  
• 3bs1.pdb. transcription regulator 21-dec-07 3bs1 Mg Br
  Title: structure of the staphylococcus aureus agra lyttr domain bound to dna reveals a beta fold with a novel mode of binding
  Author: d. j. sidote, c. barbieri, t. wu, a. m. stock
  Keywords: agra, response regulator, dna binding domain, activator, cytoplasm, dna-binding, phosphoprotein, transcription, transcription regulation, two-component regulatory system, transcription regulator
  
• 3bsb.pdb. rna binding protein/rna 23-dec-07 3bsb
  Title: crystal structure of human pumilio1 in complex with cyclinb reverse rna
  Author: y. k. gupta, d. t. nair, r. p. wharton, a. k. aggarwal
  Keywords: alternative splicing, cytoplasm, phosphoprotein, rna-binding, translation regulation, rna binding protein/rna complex
  
• 3bsx.pdb. rna binding protein/rna 26-dec-07 3bsx
  Title: crystal structure of human pumilio 1 in complex with puf5 rna
  Author: y. k. gupta, d. t. nair, r. p. wharton, a. k. aggarwal
  Keywords: alternative splicing, cytoplasm, phosphoprotein, rna-binding, translation regulation, rna binding protein/rna complex
  
• 3bv2.pdb. transferase 04-jan-08 3bv2
  Title: morpholino pyrrolotriazine p38 alpha map kinase inhibitor compound 30
  Author: j. s. sack
  Keywords: kinase, transferase, p38 map kinase, alternative splicing, atp-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein
  
• 3bxo.pdb. transferase 14-jan-08 3bxo
  Title: crystal structure of streptomyces venezuelae desvi
  Author: h. m. holden, e. s. burgie
  Keywords: desosamine, sugar, carbohydrate, antibiotic, sam, adomet
  
• 3bzc.pdb. rna binding protein 17-jan-08 3bzc
  Title: crystal structure of the tex protein from pseudomonas aeruginosa, crystal form i
  Author: s. j. johnson, d. close, c. p. hill
  Keywords: helix-hairpin-helix, s1 domain, yqgf domain, transcription, rna binding protein
  
• 3bzk.pdb. rna binding protein 18-jan-08 3bzk
  Title: crystal structure of the tex protein from pseudomonas aeruginosa, crystal form 2
  Author: s. j. johnson, d. close, c. p. hill
  Keywords: helix-hairpin-helix, s1 domain, yqgf domain, transcription, rna binding protein
  
• 3c0f.pdb. unknown function 20-jan-08 3c0f
  Title: crystal structure of a novel non-pfam protein af1514 from archeoglobus fulgidus dsm 4304 solved by s-sad using a cr x-ray source
  Author: y. li, p. bahti, n. shaw, g. song, j. yin, j. -y. zhu, h. zhang, h. xu, b. - c. wang, z. -j. liu
  Keywords: sulphur sad, methylated, unknown function
  
• 3c3y.pdb. transferase 29-jan-08 3c3y Ca
  Title: crystal structure of pfomt, phenylpropanoid and flavonoid o- methyltransferase from m. crystallinum
  Author: j. g. kopycki, d. rauh, p. neumann, m. t. stubbs
  Keywords: o-methyltransferase
  
• 3c4m.pdb. membrane protein 30-jan-08 3c4m
  Title: structure of human parathyroid hormone in complex with the extracellular domain of its g-protein-coupled receptor (pth1r)
  Author: a. a. pioszak, h. e. xu
  Keywords: transmembrane, membrane protein
  
• 3c5x.pdb. viral protein 01-feb-08 3c5x
  Title: crystal structure of the precursor membrane protein- envelope protein heterodimer from the dengue 2 virus at low ph
  Author: l. li
  Keywords: prm-e protein complex, helicase, hydrolase, nucleotide-binding, rna replication, transmembrane, viral protein
  
• 3c6d.pdb. virus 04-feb-08 3c6d (cryo-electron microscopy)
  Title: the pseudo-atomic structure of dengue immature virus
  Author: l. li
  Keywords: transcription regulation, transferase, viral nucleoprotein, icosahedral virus, virus
  
• 3c6e.pdb. viral protein 04-feb-08 3c6e
  Title: crystal structure of the precursor membrane protein- envelope protein heterodimer from the dengue 2 virus at neutral ph
  Author: l. li
  Keywords: prm-e protein complex structure, helicase, hydrolase, nucleotide-binding, rna replication, transmembrane, viral protein
  
• 3cad.pdb. unknown function 19-feb-08 3cad
  Title: crystal structure of natural killer cell receptor, ly49g
  Author: s. cho
  Keywords: c-type lectin-like domain, natural killer receptor domain, unknown function
  
• 3caj.pdb. lyase 20-feb-08 3caj Hg Cl Zn
  Title: crystal structure of the human carbonic anhydrase ii in complex with ethoxzolamide
  Author: a. di fiore, g. de simone
  Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
  
• 3cg2.pdb. transferase 04-mar-08 3cg2
  Title: p38 alpha kinase complexed with a pyrazolo-pyrimidine based inhibitor
  Author: j. s. sack
  Keywords: kinase, transferase, p38 map kinase, alternative splicing, atp-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein
  
• 3ciw.pdb. adomet binding protein 12-mar-08 3ciw Cl Fe
  Title: x-ray structure of the [fefe]-hydrogenase maturase hyde from thermatoga maritima
  Author: y. nicolet, j. k. ruback, m. c. posewitz, p. amara, c. mathevon, m. atta, m. fontecave, j. c. fontecilla-camps
  Keywords: fefe-hydrogenase maturation, beta barrel, fe4s4 cluster, adomet binding protein
  
• 3cix.pdb. adomet binding protein 12-mar-08 3cix Cl Fe
  Title: x-ray structure of the [fefe]-hydrogenase maturase hyde from thermatoga maritima in complexe with thiocyanate
  Author: y. nicolet, j. k. ruback, m. c. posewitz, p. amara, c. mathevon, m. atta, m. fontecave, j. c. fontecilla-camps
  Keywords: fefe-hydrogenase maturation, beta barrel, fe4s4 cluster, thiocyanate, fe2s2 cluster, adomet binding protein
  
• 3clq.pdb. structural genomics, unknown function 19-mar-08 3clq Se
  Title: crystal structure of a conserved protein of unknown function from enterococcus faecalis v583
  Author: k. tan, e. duggan, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: unknown function
  
• 3clr.pdb. electron transport 20-mar-08 3clr
  Title: crystal structure of the r236a etf mutant from m. methylotrophus
  Author: g. katona, d. leys
  Keywords: tmadh, electron transfer, flavoprotein, electron transport, fad, transport
  
• 3cls.pdb. electron transport 20-mar-08 3cls
  Title: crystal structure of the r236c mutant of etf from methylophilus methylotrophus
  Author: g. katona, d. leys
  Keywords: tmadh, electron transfer, dynamic interface, electron transport, fad, flavoprotein, transport
  
• 3clt.pdb. electron transport 20-mar-08 3clt
  Title: crystal structure of the r236e mutant of methylophilus methylotrophus etf
  Author: g. katona, d. leys
  Keywords: tmadh, electron transfer, flavoprotein, dynamic interface, electron transport, fad, transport
  
• 3clu.pdb. electron transport 20-mar-08 3clu
  Title: crystal structure of the r236k mutant from methylophilus methylotrophus etf
  Author: g. katona, d. leys
  Keywords: tmadh, electron transfer, flavoprotein, dynamic interface, electron transport, fad, transport
  
• 3cm1.pdb. cell cycle 20-mar-08 3cm1 Se
  Title: crystal structure of ssga-like sporulation-specific cell division protein (yp_290167.1) from thermobifida fusca yx- er1 at 2.60 a resolution
  Author: joint center for structural genomics (jcsg), m. chruszcz, w. minor, s. wang
  Keywords: protein structure initiative, psi-2, cell cycle
  
• 3cmf.pdb. oxidoreductase 21-mar-08 3cmf
  Title: crystal structure of human liver 5beta-reductase (akr1d1) in complex with nadp and cortisone. resolution 1.90 a.
  Author: l. di costanzo, j. drury, t. m. penning, d. w. christianson
  Keywords: cortisone, akr1d1, steroid, bile acid catabolism, cytoplasm, disease mutation, lipid metabolism, nadp, oxidoreductase, steroid metabolism
  
• 3cmn.pdb. hydrolase 24-mar-08 3cmn
  Title: crystal structure of a putative hydrolase with a novel fold from chloroflexus aurantiacus
  Author: r. agarwal, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
  Keywords: nysgxrc, putative hydrolase, apoenzyme, helical protein, 10492m, structural genomics, protein structure initiative, new york structural genomix research consortium
  
• 3cnb.pdb. dna binding protein 25-mar-08 3cnb
  Title: crystal structure of signal receiver domain of dna binding response regulator protein (merr) from colwellia psychrerythraea 34h
  Author: y. patskovsky, r. romero, j. freeman, s. hu, c. groshong, s. r. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: dna binding protein, protein structure initiative, psi-2, new york structural genomix research consortium, nysgxrc, structural genomics, dna- binding
  
• 3cng.pdb. hydrolase 25-mar-08 3cng Cl Zn Na Se
  Title: crystal structure of nudix hydrolase from nitrosomonas europaea
  Author: j. osipiuk, x. xu, h. zheng, a. savchenko, a. m. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: apc7497, nudix hydrolase, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 3cnh.pdb. hydrolase 25-mar-08 3cnh Na Se
  Title: crystal structure of predicted hydrolase of haloacid dehalogenase-like superfamily (np_295428.1) from deinococcus radiodurans at 1.66 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: psi-2
  
• 3cni.pdb. transport protein 25-mar-08 3cni Ca Se
  Title: crystal structure of a domain of a putative abc type-2 transporter from thermotoga maritima msb8
  Author: e. filippova, i. shumilin, k. tkaczuk, m. cymborowski, m. chruszcz, x. xu, q. que, a. savchenko, a. m. edwards, a. joachimiak, w. minor, midwest center for structural genomics (mcsg)
  Keywords: abc type-2 transporter, thermotoga maritima, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, transport protein
  
• 3cnw.pdb. structural genomics, unknown function 26-mar-08 3cnw Se
  Title: three-dimensional structure of the protein xoxi (q81ay6) from bacillus cereus. northeast structural genomics consortium target bcr196.
  Author: a. p. kuzin, m. abashidze, j. seetharaman, h. wang, c. ciccosanti, l. mao, r. xiao, r. nair, m. c. baran, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: nesg, x-ray, xoxi, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, structural genomics, unknown function
  
• 3cnx.pdb. structural genomics, unknown function 26-mar-08 3cnx Cl Mg Se
  Title: crystal structure of ntf2-like protein of unknown function (np_825848.1) from streptomyces avermitilis at 2.10 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: ntf2-like protein of unknown function, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, structural genomics, unknown function
  
• 3cny.pdb. structural genomics, unknown function 26-mar-08 3cny Se
  Title: crystal structure of putative inositol catabolism protein iole (np_786806.1) from lactobacillus plantarum at 1.85 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: unknown function
  
• 3co4.pdb. hydrolase 27-mar-08 3co4 Se
  Title: crystal structure of a chitinase from bacteroides thetaiotaomicron
  Author: l. damodharan, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
  Keywords: tim-barrel, 11092m, structural genomics, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc, glycosidase, hydrolase
  
• 3co5.pdb. transcription regulator 27-mar-08 3co5 Se
  Title: crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from neisseria gonorrhoeae
  Author: j. osipiuk, r. hendricks, l. bigelow, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: apc89341.1, sigma-54 interaction domain, transcriptional response regulator, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, transcription regulator
  
• 3co8.pdb. isomerase 27-mar-08 3co8 Se
  Title: crystal structure of alanine racemase from oenococcus oeni
  Author: k. palani, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
  Keywords: alanine racemase, protein structure initiative ii, psi-ii, nysgxrc, 11082i, plp, tim barrel, structural genomics, new york structural genomix research consortium, isomerase, pyridoxal phosphate
  
• 3coc.pdb. proton transport 27-mar-08 3coc
  Title: crystal structure of d115a mutant of bacteriorhodopsin
  Author: n. h. joh, s. faham, j. u. bowie
  Keywords: transmembrane, transport, proton transport
  
• 3cod.pdb. proton transport 27-mar-08 3cod
  Title: crystal structure of t90a/d115a mutant of bacteriorhodopsin
  Author: n. h. joh, a. min, s. faham, j. u. bowie
  Keywords: transmembrane, transport, proton transport
  
• 3col.pdb. transcription regulator 28-mar-08 3col Se
  Title: crystal structure of putative transcription regulator from lactobacillus plantarum
  Author: c. chang, l. bigelow, l. freeman, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: lactobacillus plantarum, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, dna-binding, transcription regulation
  
• 3con.pdb. hydrolase 28-mar-08 3con Mg
  Title: crystal structure of the human nras gtpase bound with gdp
  Author: l. nedyalkova, y. tong, w. tempel, l. shen, p. loppnau, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: sgc, gtpase, gdp, oncogene, disease mutation, golgi apparatus, gtp-binding, lipoprotein, membrane, methylation, nucleotide-binding, palmitate, prenylation, proto-oncogene, hydrolase
  
• 3cor.pdb. antibiotic 29-mar-08 3cor
  Title: crystal structure of the complex of peptidoglycan recognition protein (pgrp-s) with n-acetylgalactosamine at 3.1 a resolution
  Author: p. sharma, g. vikram, n. singh, s. sharma, p. kaur, t. p. singh
  Keywords: complex, nga,immune response, secreted, antimicrobial, galnac, n- acetylgalactosamine, pgrp, antibiotic
  
• 3cot.pdb. oxidoreductase 29-mar-08 3cot
  Title: crystal structure of human liver delta(4)-3-ketosteroid 5beta-reductase (akr1d1) in complex with progesterone and nadp. resolution: 2.03 a.
  Author: l. di costanzo, j. drury, t. m. penning, d. w. christianson
  Keywords: 5beta reductase, e120, bile acid catabolism, cytoplasm, disease mutation, lipid metabolism, nadp, oxidoreductase, steroid metabolism