Recent PDB releases or updates: week of 30 November 2007

• 1q8r.pdb. recombination,hydrolase 22-aug-03 1q8r
  Title: structure of e.coli rusa holliday junction resolvase
  Author: j. b. rafferty, e. l. bolt, t. a. muranova, s. e. sedelnikova, p. leonard, a. pasquo, p. j. baker, d. w. rice, g. j. sharples, r. g. lloyd
  Keywords: chorismate mutase-like fold, recombination,hydrolase
  
• 1tfj.pdb. lipid transport 27-may-04 1tfj Cl
  Title: crystal structure of bovine glycolipid transfer protein in complex with a fatty acid
  Author: t. t. airenne, h. kidron, g. west, y. nymalm, p. mattjus, t. a. salminen
  Keywords: lipid transport
  
• 1vyo.pdb. glycoprotein 03-may-04 1vyo
  Title: crystal structure of avidin
  Author: t. t. airenne, m. s. johnson, t. a. salminen
  Keywords: biotin
  
• 1wyd.pdb. ligase 12-feb-05 1wyd Cl
  Title: crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii
  Author: y. maeda, m. t. hossain, s. ubukata, k. suzuki, t. sekiguchi, a. takenaka
  Keywords: archaea, sulfolobus tokodaii
  
• 2adf.pdb. blood clotting/immune system 20-jul-05 2adf
  Title: crystal structure and paratope determination of 82d6a3, an antithrombotic antibody directed against the von willebrand factor a3-domain
  Author: s. staelens, m. a. hadders, s. vauterin, c. platteau, k. vanhoorelbeke, e. g. huizinga, h. deckmyn
  Keywords: a3-domain, 82d6a3, collagen binding, paratope, epitope, crystal structure, antithrombotic, blood clotting/immune system complex
  
• 2bon.pdb. transferase 12-apr-05 2bon Mg
  Title: structure of an escherichia coli lipid kinase (yegs)
  Author: h. m. bakali, k. a. johnson, b. m. hallberg, m. d. herman, p. nordlund
  Keywords: dag kinase,atp-binding, transferase
  
• 2cmy.pdb. hydrolase 16-may-06 2cmy Ca
  Title: crystal complex between bovine trypsin and veronica hederifolia trypsin inhibitor
  Author: r. conners, j. l. yardley, a. konarev, p. shewry, r. l. brady
  Keywords: serine protease inhibitor, calcium, zymogen, protease, digestion, hydrolase, metal-binding, serine protease
  
• 2dqa.pdb. hydrolase 24-may-06 2dqa Pt
  Title: crystal structure of tapes japonica lysozyme
  Author: t. goto, y. kakuta, y. abe, k. takeshita, t. imoto, t. ueda
  Keywords: enzyme, substrate complex
  
• 2dy1.pdb. signaling protein, translation 04-sep-06 2dy1 Mg
  Title: crystal structure of ef-g-2 from thermus thermophilus
  Author: h. wang, c. takemoto, k. murayama, t. terada, l. chen, z. j. liu, b. c. wang, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: translation
  
• 2dzd.pdb. ligase 27-sep-06 2dzd
  Title: crystal structure of the biotin carboxylase domain of pyruvate carboxylase
  Author: s. kondo, y. nakajima, s. sugio, s. sueda, m. n. islam, h. kondo
  Keywords: pyruvate carboxylase, bacillus thermodenitrificans, ligase
  
• 2e3t.pdb. oxidoreductase 28-nov-06 2e3t Fe Ca
  Title: crystal structure of rat xanthine oxidoreductase mutant (w335a and f336l)
  Author: r. asai, t. nishino, t. matsumura, k. okamoto, e. f. pai, t. nishino
  Keywords: oxidoreductase
  
• 2e7p.pdb. electron transport 12-jan-07 2e7p Fe
  Title: crystal structure of the holo form of glutaredoxin c1 from populus tremula x tremuloides
  Author: h. unno, t. takahashi, t. kawakami, s. aimoto, t. hase, m. kusunoki, n. rouhier, j. p. jacquot
  Keywords: glutaredoxin, poplar, electron transport
  
• 2eak.pdb. sugar binding protein 31-jan-07 2eak
  Title: crystal structure of human galectin-9 n-terminal crd in complex with lactose
  Author: m. nagae, s. nakamura-tsuruta, n. nishi, t. nakamura, j. hirabayashi, s. wakatsuki, r. kato
  Keywords: carbohydrate binding protein, galectin, sugar binding protein
  
• 2eal.pdb. sugar binding protein 31-jan-07 2eal
  Title: crystal structure of human galectin-9 n-terminal crd in complex with forssman pentasaccharide
  Author: m. nagae, s. nakamura-tsuruta, n. nishi, t. nakamura, j. hirabayashi, s. wakatsuki, r. kato
  Keywords: carbohydrate binding protein, galectin, sugar binding protein
  
• 2ehb.pdb. signalling protein/transferase 06-mar-07 2ehb Ca
  Title: the structure of the c-terminal domain of the protein kinase atsos2 bound to the calcium sensor atsos3
  Author: m. j. sanchez-barrena
  Keywords: ca(ii) ions bound to sos3 (ef-hands 1 and 4), sos2 fisl motif, sos2 phosphatase binding domain (ppi), signalling protein/transferase complex
  
• 2ejm.pdb. ligase 19-mar-07 2ejm He Hg (NMR, 20 structures)
  Title: solution structure of ruh-072, an apo-biotnyl domain form human acetyl coenzyme a carboxylase
  Author: a. z. m. ruhul momen, h. hirota, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: ligase
  
• 2ejq.pdb. structural genomics, unknown function 20-mar-07 2ejq Mg
  Title: conserved hypothetical protein (ttha0227) from thermo thermophilus hb8
  Author: p. h. rehse, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, structural genomics, unknown function
  
• 2ejs.pdb. ligase 20-mar-07 2ejs He Hg (NMR, 20 structures)
  Title: solution structure of ruh-076, a human cue domain
  Author: a. z. m. ruhul momen, s. kitasaka, h. hirota, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: rsgi
  
• 2ejt.pdb. transferase 20-mar-07 2ejt
  Title: complex structure of trm1 from pyrococcus horikoshii with s- adenosyl-l-methionine
  Author: ihsanawati, m. shirouzu, y. bessho, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: guanine-26,n(2)-n(2)- dimethyltransferase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2eju.pdb. transferase 20-mar-07 2eju
  Title: complex structure of trm1 from pyrococcus horikoshii with s- adenosyl-l-homocystein
  Author: ihsanawati, m. shirouzu, y. bessho, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: guanine-26,n(2)-n(2)- dimethyltransferase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2ejz.pdb. transferase 22-mar-07 2ejz Na
  Title: structural study of project id ph0725 from pyrococcus horikoshii ot3 (y11m)
  Author: y. asada, m. taketa, n. ono, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2ek0.pdb. metal binding protein 22-mar-07 2ek0 Zn
  Title: stage v sporolation protein s (spovs) from thermus thermophilus zinc form
  Author: p. h. rehse, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, metal binding protein
  
• 2ek2.pdb. transferase 22-mar-07 2ek2 Na
  Title: structural study of project id ph0725 from pyrococcus horikoshii ot3 (e140m)
  Author: y. asada, y. matsuura, y. tanaka, t. nakamoto, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2ek3.pdb. transferase 22-mar-07 2ek3 Na
  Title: structural study of project id ph0725 from pyrococcus horikoshii ot3 (l3m)
  Author: y. asada, h. shimada, m. taketa, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2ek4.pdb. transferase 22-mar-07 2ek4 Na
  Title: structural study of project id ph0725 from pyrococcus horikoshii ot3 (l8m)
  Author: y. asada, h. shimada, m. taketa, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2ek6.pdb. rna binding protein 22-mar-07 2ek6
  Title: crystal structure of human rna-binding protein 12
  Author: p. h. rehse, n. nakano, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, rna binding protein
  
• 2ek7.pdb. transferase 22-mar-07 2ek7 Na
  Title: structural study of project id ph0725 from pyrococcus horikoshii ot3 (l163m)
  Author: y. asada, m. taketa, y. morikawa, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2eka.pdb. transferase 22-mar-07 2eka Na
  Title: structural study of project id ph0725 from pyrococcus horikoshii ot3 (l202m)
  Author: y. asada, y. matsuura, y. kageyama, t. nakamoto, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2ekb.pdb. hydrolase 22-mar-07 2ekb Na
  Title: structural study of project id tthb049 from thermus thermophilus hb8 (l19m)
  Author: y. asada, m. taketa, y. tanaka, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2ekc.pdb. lyase 22-mar-07 2ekc
  Title: structural study of project id aq_1548 from aquifex aeolicus vf5
  Author: y. asada, n. kunishima
  Keywords: lyase
  
• 2ekd.pdb. structural genomics, unknown function 22-mar-07 2ekd Cl Se
  Title: structural study of project id ph0250 from pyrococcus horikoshii ot3
  Author: y. asada, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, structural genomics, unknown function
  
• 2ekf.pdb. ligase 23-mar-07 2ekf He Hg (NMR, 20 structures)
  Title: solution structure of ruh-075, a human cue domain
  Author: a. z. m. ruhul momen, h. hirota, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: rsgi
  
• 2ekh.pdb. signaling protein 23-mar-07 2ekh He Hg (NMR, 20 structures)
  Title: solution structures of the sh3 domain of human kiaa0418
  Author: m. sato, n. tochio, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2eki.pdb. signaling protein 23-mar-07 2eki He Hg (NMR, 20 structures)
  Title: solution structures of the tgs domain of human developmentally-regulated gtp-binding protein 1
  Author: m. sato, s. koshiba, s. watanabe, t. harada, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2ekj.pdb. signaling protein 23-mar-07 2ekj He Hg (NMR, 20 structures)
  Title: solution structures of the fn3 domain of human collagen alpha-1(xx) chain
  Author: m. sato, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, signaling protein
  
• 2ekk.pdb. protein binding 23-mar-07 2ekk He Hg (NMR, 20 structures)
  Title: solution structure of ruh-074, a human uba domain
  Author: s. kitasaka, a. z. m. ruhul momen, h. hirota, y. muto, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: uba, compact three helix bundle, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, protein binding
  
• 2eko.pdb. transferase 23-mar-07 2eko He Hg (NMR, 20 structures)
  Title: solution structure of ruh-073, a pseudo chromo domain from human cdna
  Author: a. z. m. ruhul momen, h. hirota, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: transferase
  
• 2gd7.pdb. transcription 15-mar-06 2gd7 (NMR, 20 structures)
  Title: the structure of the cyclin t-binding domain of hexim1 reveals the molecular basis for regulation of transcription elongation
  Author: s. a. dames
  Keywords: transcription regulation, transcription elongation, positive transcription elongation factor-b, p-tefb nmr, structure determination, symmetric dimer, coiled coil, maq1, clp-1, edg1
  
• 2h61.pdb. metal binding protein, signaling protein30-may-06 2h61 Ca
  Title: x-ray structure of human ca2+-loaded s100b
  Author: t. ostendorp, c. w. heizmann, p. m. h. kroneck, g. fritz
  Keywords: ef-hand, calcium-binding, rage
  
• 2id7.pdb. signaling protein 14-sep-06 2id7
  Title: 1.75 a structure of t87i phosphono-chey
  Author: c. j. halkides, r. m. haas, k. a. mcadams, e. s. casper, b. d. santarsiero, a. d. mesecar
  Keywords: signaling protein
  
• 2id9.pdb. signaling protein 14-sep-06 2id9
  Title: 1.85 a structure of t87i/y106w phosphono-chey
  Author: c. j. halkides, r. m. haas, k. a. mcadams, e. s. casper, b. d. santarsiero, a. d. mesecar
  Keywords: signaling protein
  
• 2ide.pdb. biosynthetic protein 15-sep-06 2ide
  Title: crystal structure of the molybdenum cofactor biosynthesis protein c (ttha1789) from thermus theromophilus hb8
  Author: j. jeyakanthan, s. p. kanaujia, c. vasuki ranjani, k. sekar, s. baba, a. ebihara, s. kuramitsu, a. shinkai, y. shiro, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: biosynthetic protein
  
• 2idh.pdb. protein binding 15-sep-06 2idh
  Title: crystal structure of human fe65 ww domain
  Author: m. meiyappan, g. birrane, j. a. a. ladias
  Keywords: fe65
  
• 2idm.pdb. signaling protein 15-sep-06 2idm
  Title: 2.00 a structure of t87i/y106w phosphono-chey
  Author: c. j. halkides, r. m. haas, k. a. mcadams, e. s. casper, b. d. santarsiero, a. d. mesecar
  Keywords: signaling protein
  
• 2igb.pdb. transferase 22-sep-06 2igb
  Title: crystal structure of pyrr, the regulator of the pyrimidine biosynthetic operon in bacillus caldolyticus, ump-bound form
  Author: p. chander, r. l. switzer, j. l. smith
  Keywords: transferase, transcription regulation, attenuation protein, rna-binding, pyrimidine biosynthesis, prtase, uracil phosphoribosyltransferase
  
• 2iqx.pdb. hydrolase inhibitor 14-oct-06 2iqx
  Title: rat phosphatidylethanolamine-binding protein containing the s153e mutation in the complex with o-phosphorylethanolamine
  Author: y. kim, g. joachimiak, m. c. clark, m. rosner, a. joachimiak
  Keywords: hydrolase inhibitor
  
• 2iqy.pdb. hydrolase inhibitor 14-oct-06 2iqy Cl Ca
  Title: rat phosphatidylethanolamine-binding protein
  Author: y. kim, g. joachimiak, g. l. heil, s. koide, a. joachimiak
  Keywords: hydrolase inhibitor
  
• 2j4a.pdb. receptor 28-aug-06 2j4a Br
  Title: human thyroid hormone receptor beta ligand binding domain in complex with kb131084
  Author: m. farnegardh
  Keywords: metal-binding
  
• 2j4m.pdb. protein binding 01-sep-06 2j4m He Hg (NMR, 6 structures)
  Title: double dockerin from piromyces equi cel45a
  Author: t. nagy, r. b. tunnicliffe, l. d. higgins, c. walters, h. j. gilbert, m. p. williamson
  Keywords: cellulosome, protein binding, small cysteine-rich
  
• 2j4n.pdb. protein binding 01-sep-06 2j4n He Hg (NMR, 6 structures)
  Title: double dockerin from piromyces equi cel45a
  Author: t. nagy, r. b. tunnicliffe, l. d. higgins, c. walters, h. j. gilbert, m. p. williamson
  Keywords: cellulosome, protein binding, small cysteine-rich
  
• 2j4x.pdb. signaling protein 07-sep-06 2j4x Zn
  Title: streptococcus dysgalactiae-derived mitogen (sdm)
  Author: s. saarinen, h. kato, t. uchiyama, t. miyoshi-akiyama, a. c. papageorgiou
  Keywords: signaling protein
  
• 2j4y.pdb. signaling protein 07-sep-06 2j4y
  Title: crystal structure of a rhodopsin stabilizing mutant expressed in mammalian cells
  Author: j. standfuss, g. xie, p. edwards, m. burghammer, d. d. oprian, g. f. x. schertler
  Keywords: retinal protein, phosphorylation, signaling protein, photoreceptor, transmembrane, visual pigment
  
• 2j52.pdb. immunoglobulin 11-sep-06 2j52 He Hg (NMR, regularized mean structure)
  Title: solution structure of gb1 domain protein g and low and high pressure.
  Author: d. j. wilton, r. b. tunnicliffe, y. o. kamatari, k. akasaka, m. p. williamson
  Keywords: immunoglobulin, pressure, cell wall, protein g, igg-binding protein
  
• 2j53.pdb. immunoglobulin 11-sep-06 2j53 He Hg (NMR, regularized mean structure)
  Title: solution structure of gb1 domain protein g and low and high pressure.
  Author: d. j. wilton, r. b. tunnicliffe, y. o. kamatari, k. akasaka, m. p. williamson
  Keywords: immunoglobulin, pressure, cell wall, protein g, igg-binding protein
  
• 2j5b.pdb. ligase 13-sep-06 2j5b
  Title: structure of the tyrosyl trna synthetase from acanthamoeba polyphaga mimivirus complexed with tyrosynol
  Author: c. abergel, j. rudinger-thirion, r. giege, j. -m. claverie
  Keywords: mimivirus, tyrosynol, ligase
  
• 2jcd.pdb. oxidoreductase 21-dec-06 2jcd Mn
  Title: structure of the n-oxygenase aurf from streptomyces thioluteus
  Author: g. e. zocher, r. winkler, c. hertweck, g. e. schulz
  Keywords: oxidoreductase, n-oxygenase, di-manganese mono-oxygenase
  
• 2je4.pdb. hydrolase 15-jan-07 2je4
  Title: atomic-resolution crystal structure of chemically- synthesized hiv-1 protease in complex with jg-365
  Author: e. malito, e. c. b. johnson, w. j. tang
  Keywords: hydrolase, high resolution, aspartyl protease, human immunodeficiency virus 1
  
• 2jiy.pdb. photosynthesis 03-jul-07 2jiy Cl Mg Fe
  Title: photosynthetic reaction center mutant with ala m149 replaced with trp (chain m, am149w)
  Author: p. k. fyfe, j. potter, j. cheng, c. williams, a. j. watson, m. r. jones
  Keywords: reaction center, membrane protein, photosynthetic reaction center, electron transport, bacteriochlorophyll, chlorophyll, metal-binding, transmembrane, iron, membrane, transport, magnesium, chromophor...
  
• 2jj0.pdb. photosynthesis 03-jul-07 2jj0 Cl Mg Fe
  Title: photosynthetic reaction center mutant with ala m248 replaced with trp (chain m, am248w)
  Author: p. k. fyfe, j. potter, j. cheng, c. williams, a. j. watson, m. r. jones
  Keywords: reaction center, membrane protein, photosynthetic reaction center, electron transport, bacteriochlorophyll, chlorophyll, metal-binding, transmembrane, iron, membrane, transport, magnesium, chromophor...
  
• 2jr1.pdb. dna binding protein 18-jun-07 2jr1 He Hg (NMR, 20 structures)
  Title: solution structure of the dna binding domain of a nucleoid- associated protein, h-ns, from the phytopathogen xylella fastidiosa.
  Author: l. k. rosselli, m. l. sforca, a. p. souza, a. c. zeri
  Keywords: dna biding protein, xylella fastidiosa, dna binding protein
  
• 2jt4.pdb. signaling protein 18-jul-07 2jt4 He Hg (NMR, 20 structures)
  Title: solution structure of the sla1 sh3-3-ubiquitin complex
  Author: y. he, i. radhakrishnan
  Keywords: signaling protein
  
• 2jv2.pdb. unknown function 11-sep-07 2jv2 He Hg (NMR, 22 structures)
  Title: solution structure of the n-terminal domain of ph1500
  Author: i. varnay, v. truffault, m. coles
  Keywords: unknown function
  
• 2no4.pdb. hydrolase 24-oct-06 2no4 Cl
  Title: crystal structure analysis of a dehalogenase
  Author: j. w. schmidberger, m. c. j. wilce
  Keywords: had superfamily, rossman fold, hydrolase
  
• 2no5.pdb. hydrolase 24-oct-06 2no5 Cl
  Title: crystal structure analysis of a dehalogenase with intermediate complex
  Author: j. w. schmidberger, m. c. j. wilce
  Keywords: dehalogenase, had superfamily, intermediate structure, hydrolase
  
• 2ns3.pdb. toxin 03-nov-06 2ns3 Hg (NMR, 20 structures)
  Title: solution structure of ribbon buia
  Author: a. h. jin, h. brandstaetter, s. t. nevin, c. c. tan, r. j. clark, d. j. adams, p. f. alewood, d. j. craik, n. l. daly
  Keywords: toxin
  
• 2nto.pdb. transferase 08-nov-06 2nto
  Title: structure of the glutathione transferase from ochrobactrum anthropi in complex with glutathione
  Author: l. federici, d. bonivento, a. di matteo, n. allocati
  Keywords: transferase
  
• 2o5n.pdb. viral protein 06-dec-06 2o5n Se
  Title: crystal structure of a viral glycoprotein
  Author: j. mans, k. natarajan, h. robinson, d. h. margulies
  Keywords: mouse cytomegalovirus, mhc-i-like, m145 family, mhc- iv, ig-superfamily, alpha-beta protein, viral protein
  
• 2oa5.pdb. structural protein 14-dec-06 2oa5 Se
  Title: crystal structure of orf52 from murid herpesvirus (muhv-4) (murine gammaherpesvirus 68) at 2.1 a resolution. northeast structural genomics consortium target mhr28b.
  Author: j. benach, y. chen, j. seetharaman, h. janjua, r. xiao, k. cunningham, l. -c. ma, c. k. ho, t. b. acton, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: nesg, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
  
• 2oei.pdb. protein binding 29-dec-06 2oei
  Title: crystal structure of human fe65-ww domain in complex with human mena peptide
  Author: m. meiyappan, g. birrane, j. a. a. ladias
  Keywords: fe65, human mena
  
• 2ogr.pdb. fluorescent protein 08-jan-07 2ogr
  Title: crystal structure of yellow fluorescent protein from zoanthus sp. at 1.8 a resolution
  Author: n. v. pletneva, s. v. pletnev, t. v. tikhonova, v. z. pletnev
  Keywords: yellow fluorescent protein, zoanthus sp., chromophore structure, tetramer structure, intermonomer interfaces
  
• 2ohg.pdb. isomerase 10-jan-07 2ohg
  Title: structural basis for glutamte racemase inhibition
  Author: e. e. kim
  Keywords: racemase
  
• 2oho.pdb. isomerase 10-jan-07 2oho
  Title: structural basis for glutamate racemase inhibitor
  Author: e. e. kim
  Keywords: racemase
  
• 2ohv.pdb. isomerase 10-jan-07 2ohv
  Title: structural basis for glutamate racemase inhibition
  Author: e. e. kim
  Keywords: racemase
  
• 2ojk.pdb. fluorescent protein 12-jan-07 2ojk
  Title: crystal structure of green fluorescent protein from zoanthus sp at 2.2 a resolution
  Author: n. v. pletneva, s. v. pletnev, t. v. tikhonova, v. z. pletnev
  Keywords: zoanthus sp, chromophore structure
  
• 2oq3.pdb. transferase 31-jan-07 2oq3 He Hg (NMR, 21 structures)
  Title: solution structure of the mannitol- specific cryptic phosphotransferase enzyme iia cmtb from escherichia coli
  Author: c. jin, c. yu
  Keywords: phosphotransferase, escherichia coli, solution structure
  
• 2osg.pdb. cell adhesion 05-feb-07 2osg He Hg (NMR, 20 structures)
  Title: solution structure and binding property of the domain- swapped dimer of zo2pdz2
  Author: j. w. wu, y. s. yang, j. h. zhang, p. ji, j. h. wu, y. y. shi
  Keywords: zo-2, pdz domain, homodimer, domain swapping, nmr structure, cell adhesion
  
• 2oxd.pdb. transferase 20-feb-07 2oxd Br
  Title: protein kinase ck2 in complex with tetrabromobenzoimidazole k17, k22 and k32 inhibitors
  Author: r. battistutta, g. zanotti, l. cendron
  Keywords: inhibitor complex, transferase
  
• 2oxx.pdb. transferase 21-feb-07 2oxx Br
  Title: protein kinase ck2 in complex with tetrabromobenzoimidazole derivatives k17, k22 and k32
  Author: r. battistutta, g. zanotti, l. cendron
  Keywords: inhibitors, tetrabromobenzoimidazole derivatives, transferase
  
• 2oxy.pdb. transferase 21-feb-07 2oxy Br
  Title: protein kinase ck2 in complex with tetrabromobenzoimidazole derivatives k17, k22 and k32
  Author: r. battistutta, g. zanotti, l. cendron
  Keywords: inhibitors, tetrabromobenzoimidazole derivatives, transferase
  
• 2p4l.pdb. toxin 12-mar-07 2p4l Hg (NMR, 20 structures)
  Title: structure and sodium channel activity of an excitatory i1- superfamily conotoxin
  Author: o. buczek, d. x. wei, j. j. babon, x. d. yang, b. fiedler, d. yoshikami, b. m. olivera, g. bulaj, r. s. norton
  Keywords: iodoacetic acid; ina, sodium current; nem, n- ethylmaleimide; nmr, nuclear magnetic resonance; noe, nuclear overhauser effect; tfa, trifluoroacetic acid; vgsc, voltage-gated sodium channel., toxin
  
• 2p5e.pdb. immune system 15-mar-07 2p5e Mg
  Title: crystal structures of high affinity human t-cell receptors bound to pmhc reveal native diagonal binding geometry
  Author: m. sami, p. j. rizkallah, s. dunn, y. li, r. moysey, a. vuidepot, e. baston, p. todorov, p. molloy, f. gao, j. m. boulter, b. k. jakobsen
  Keywords: cdr3, phage display, mutant, high affinity, ny-eso-1, immune system
  
• 2p5w.pdb. immune system 16-mar-07 2p5w Mg Ca
  Title: crystal structures of high affinity human t-cell receptors bound to pmhc reveal native diagonal binding geometry
  Author: m. sami, p. j. rizkallah, s. dunn, y. li, r. moysey, a. vuidepot, e. baston, p. todorov, p. molloy, f. gao, j. m. boulter, b. k. jakobsen
  Keywords: cdr2, phage display, mutant, high affinity, ny-eso-1, immune system
  
• 2p6l.pdb. transferase 19-mar-07 2p6l
  Title: crystal structure of ph0725 from pyrococcus horikoshii ot3
  Author: h. yamamoto, y. matsuura, n. ono, h. shimada, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2p6m.pdb. hydrolase 19-mar-07 2p6m Na
  Title: crystal structure of tthb049 from thermus thermophilus hb8
  Author: m. sugahara, y. matsuura, y. morikawa, h. shimada, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, hydrolase
  
• 2p6o.pdb. hydrolase 19-mar-07 2p6o
  Title: crystal structure of tthb049 from thermus thermophilus hb8
  Author: h. yamamoto, m. taketa, y. tanaka, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, hydrolase
  
• 2p75.pdb. hydrolase 20-mar-07 2p75 Na
  Title: crystal structure of tthb049 from thermus thermophilus hb8
  Author: m. sugahara, y. tanaka, y. matsuura, t. nakamoto, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, hydrolase
  
• 2p77.pdb. hydrolase 20-mar-07 2p77 Na
  Title: crystal structure of tthb049 from thermus thermophilus hb8
  Author: m. sugahara, m. taketa, y. kageyama, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, hydrolase
  
• 2p78.pdb. hydrolase 20-mar-07 2p78 Na
  Title: crystal structure of tthb049 from thermus thermophilus hb8
  Author: m. sugahara, m. taketa, y. kageyama, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, hydrolase
  
• 2p79.pdb. hydrolase 20-mar-07 2p79 Na
  Title: crystal structure of tthb049 from thermus thermophilus hb8
  Author: m. sugahara, m. taketa, y. kageyama, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, hydrolase
  
• 2p9d.pdb. transferase 25-mar-07 2p9d
  Title: crystal structure of ph0725 from pyrococcus horikoshii ot3
  Author: h. yamamoto, m. taketa, y. morikawa, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2p9f.pdb. isomerase 25-mar-07 2p9f
  Title: crystal structure of tthb049 from thermus thermophilus hb8
  Author: h. yamamoto, m. taketa, y. kageyama, y. matsuura, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2pfg.pdb. oxidoreductase 04-apr-07 2pfg Cl
  Title: crystal structure of human cbr1 in complex with bigf2.
  Author: d. rauh, r. l. bateman, k. m. shokat
  Keywords: macro molecule, oxidoreductase
  
• 2pio.pdb. hormone receptor 13-apr-07 2pio
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: inhibitors coactivator binding af-2 pocket, hormone receptor
  
• 2pip.pdb. hormone receptor 13-apr-07 2pip
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: coactivators, af-2 pocket, inhibitors, hormone receptor
  
• 2piq.pdb. hormone receptor 13-apr-07 2piq
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: inhibitors coactivator binding af-2, hormone receptor
  
• 2pir.pdb. hormone receptor 13-apr-07 2pir
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2pit.pdb. hormone receptor 13-apr-07 2pit I
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2piu.pdb. hormone receptor 13-apr-07 2piu I
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2piv.pdb. hormone receptor 13-apr-07 2piv I
  Title: androgen receptor with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2piw.pdb. hormone receptor 13-apr-07 2piw I
  Title: androgen receptor with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2pix.pdb. hormone receptor 13-apr-07 2pix F
  Title: ar lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, p. webb, r. k. guy, k. r. fletterick
  Keywords: hormone receptor
  
• 2pkl.pdb. hormone receptor 17-apr-07 2pkl I
  Title: androgen receptor lbd with small molecule
  Author: e. estebanez-perpina, a. a. arnold, j. d. baxter, k. r. guy, p. webb, r. j. fletterick
  Keywords: hormone receptor
  
• 2pm8.pdb. hydrolase 20-apr-07 2pm8
  Title: crystal structure of recombinant full length human butyrylcholinesterase
  Author: m. n. ngamelue, k. homma, o. lockridge, o. a. asojo
  Keywords: hydrolase
  
• 2pns.pdb. hydrolase 25-apr-07 2pns
  Title: 1.9 angstrom resolution crystal structure of a plant cysteine protease ervatamin-c refinement with cdna derived amino acid sequence
  Author: r. ghosh, p. guha thakurta, s. biswas, c. chakrabarti, j. k. dattagupta
  Keywords: thermostable, plant cysteine protease, ervatamin
  
• 2pr5.pdb. flavoprotein, signaling protein 03-may-07 2pr5 Na
  Title: structural basis for light-dependent signaling in the dimeric lov photosensor ytva (dark structure)
  Author: a. moglich, k. moffat
  Keywords: lov, per-arnt-sim, pas, flavoprotein, signaling protein
  
• 2pr6.pdb. flavoprotein, signaling protein 03-may-07 2pr6
  Title: structural basis for light-dependent signaling in the dimeric lov photosensor ytva (light structure)
  Author: a. moglich, k. moffat
  Keywords: lov, per-arnt-sim, pas, flavoprotein, signaling protein
  
• 2psq.pdb. transferase 07-may-07 2psq
  Title: crystal structure of unphosphorylated unactivated wild type fgf receptor 2 (fgfr2) kinase domain
  Author: h. chen, m. mohammadi
  Keywords: transferase
  
• 2pvf.pdb. transferase 09-may-07 2pvf Mg
  Title: crystal structure of tyrosine phosphorylated activated fgf receptor 2 (fgfr2) kinase domain in complex with atp analog and substrate peptide
  Author: h. chen, m. mohammadi
  Keywords: transferase
  
• 2pvy.pdb. transferase 10-may-07 2pvy
  Title: crystal strucure of fgf receptor 2 (fgfr2) kinase domain harboring the pathogenic k659n mutation responsible for an unclassified craniosynostosis syndrome.
  Author: h. chen, m. mohammadi
  Keywords: transferase
  
• 2pwl.pdb. transferase 11-may-07 2pwl
  Title: crystal strucure of fgf receptor 2 (fgfr2) kinase domain harboring the pathogenic n549h mutation responsible for crouzon syndrome.
  Author: h. chen, m. mohammadi
  Keywords: transferase
  
• 2pwm.pdb. viral protein 11-may-07 2pwm Cl
  Title: crystal structure of hiv-1 ca146 a92e real cell
  Author: b. n. kelly
  Keywords: hiv-1, anti-viral, viral protein
  
• 2pwo.pdb. viral protein 11-may-07 2pwo Cl
  Title: crystal structure of hiv-1 ca146 a92e psuedo cell
  Author: b. n. kelly
  Keywords: hiv-1, anti-viral, viral protein
  
• 2px0.pdb. biosynthetic protein 14-may-07 2px0 Mg
  Title: crystal structure of flhf complexed with gmppnp/mg(2+)
  Author: g. bange, k. wild, i. sinning
  Keywords: flagellum, protein transport, biosynthetic protein
  
• 2px3.pdb. biosynthetic protein 14-may-07 2px3 Mg
  Title: crystal structure of flhf complexed with gtp/mg(2+)
  Author: g. bange, k. wild, i. sinning
  Keywords: flagellum, protein transport, biosynthetic protein
  
• 2pxr.pdb. viral protein 14-may-07 2pxr Cl Zn
  Title: crystal structure of hiv-1 ca146 in the presence of cap-1
  Author: b. n. kelly
  Keywords: hiv-1, anti-viral, small molecule inhibition, viral protein
  
• 2pxs.pdb. fluorescent protein 14-may-07 2pxs
  Title: crystal structure of n66d mutant of green fluorescent protein from zoanthus sp. at 2.2 a resolution (mature state)
  Author: s. v. pletnev, n. v. pletneva, t. v. tikhonova, v. z. pletnev
  Keywords: red fluorescent protein, green fluorescent protein, chromophore structure
  
• 2pxw.pdb. fluorescent protein 14-may-07 2pxw
  Title: crystal structure of n66d mutant of green fluorescent protein from zoanthus sp. at 2.4 a resolution (transition state)
  Author: s. v. pletnev, n. v. pletneva, t. v. tikhonova, v. z. pletnev
  Keywords: red fluorescent protein, green fluorescent protein, chromophore structure
  
• 2py3.pdb. transferase 15-may-07 2py3 Mg
  Title: crystal strucure of fgf receptor 2 (fgfr2) kinase domain harboring the pathogenic e565g mutation responsible for pfeiffer syndrome
  Author: h. chen, m. mohammadi
  Keywords: transferase
  
• 2pye.pdb. immune system 16-may-07 2pye
  Title: crystal structures of high affinity human t-cell receptors bound to pmhc revealnative diagonal binding geometry tcr clone c5c1 complexed with mhc
  Author: m. sami, p. j. rizkallah, s. dunn, y. li, r. moysey, a. vuidepot, e. baston, p. todorov, p. molloy, f. gao, j. m. boulter, b. k. jakobsen
  Keywords: cdr3, phage display, mutant, high affinity, ny-eso-1, immune system
  
• 2pyf.pdb. immune system 16-may-07 2pyf
  Title: crystal structures of high affinity human t-cell receptors bound to pmhc revealnative diagonal binding geometry unbound tcr clone 5-1
  Author: m. sami, p. j. rizkallah, s. dunn, y. li, r. moysey, a. vuidepot, e. baston, p. todorov, p. molloy, f. gao, j. m. boulter, b. k. jakobsen
  Keywords: cdr3, phage display, mutant, high affinity, ny-eso-1, immune system
  
• 2pz5.pdb. transferase 17-may-07 2pz5 Mg
  Title: crystal strucure of fgf receptor 2 (fgfr2) kinase domain harboring the pathogenic n549t mutation responsible for pfeiffer syndrome
  Author: h. chen, m. mohammadi
  Keywords: transferase
  
• 2pzp.pdb. transferase 18-may-07 2pzp Mg
  Title: crystal strucure of fgf receptor 2 (fgfr2) kinase domain harboring the pathogenic k526e mutation responsible for crouzon syndrome
  Author: h. chen, m. mohammadi
  Keywords: transferase
  
• 2pzr.pdb. transferase 18-may-07 2pzr
  Title: crystal strucure of fgf receptor 2 (fgfr2) kinase domain harboring the pathogenic k641r mutation responsible for pfeiffer syndrome
  Author: h. chen, m. mohammadi
  Keywords: transferase
  
• 2q0b.pdb. transferase 21-may-07 2q0b
  Title: crystal strucure of fgf receptor 2 (fgfr2) kinase domain harboring the pathogenic e565a mutation responsible for pfeiffer syndrome
  Author: h. chen, m. mohammadi
  Keywords: transferase
  
• 2q0o.pdb. transcription 22-may-07 2q0o
  Title: crystal structure of an anti-activation complex in bacterial quorum sensing
  Author: g. chen, p. d. jeffrey, c. fuqua, y. shi, l. chen
  Keywords: two-helix coiled coil, transcription
  
• 2uw0.pdb. transferase/inhibitor complex 15-mar-07 2uw0 Cl
  Title: structure of pka-pkb chimera complexed with 6-(4-(4-(4- chloro-phenyl)-piperidin-4-yl)-phenyl)-9h-purine
  Author: t. g. davies, a. donald, t. mchardy, m. g. rowlands, l. j. hunter, r. g. boyle, g. w. aherne, m. d. garrett, i. collins
  Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...