Recent PDB releases or updates: week of 20 July 2007
- 1rkn.pdb.
hydrolase 22-nov-03 1rkn
(NMR, 12 structures)
Title: solution structure of 1-110 fragment of staphylococcal nuclease with g88w mutation
Author: d. s. liu, y. g. feng, k. q. ye, l. shan, j. f. wang
Keywords: folding, g88w110
- 2b4o.pdb.
hydrolase 26-sep-05 2b4o
Cl
Title: structure of the r258k mutant of selenomonas ruminantium ptp-like phytase
Author: r. j. gruninger, l. b. selinger, s. c. mosimann
Keywords: ionic strength
- 2b4p.pdb.
hydrolase 26-sep-05 2b4p
Cl
Title: structure of the d223n mutant of selenomonas ruminantium ptp-like phytase
Author: r. j. gruninger, l. b. selinger, s. c. mosimann
Keywords: ionic strength
- 2b4u.pdb.
hydrolase 26-sep-05 2b4u
Cl Se
Title: structure of the c252s mutant of selenomonas ruminantium ptp-like phytase
Author: r. j. gruninger, l. b. selinger, s. c. mosimann
Keywords: ionic strength
- 2c2s.pdb.
oxidoreductase 16-sep-05 2c2s
B
Title: human dihydrofolate reductase complexed with nadph and 2,4- diamino-5-(1-o-carboranylmethyl)-6-methylpyrimidine, a novel boron containing, nonclassical antifolate
Author: a. k. w. leung, r. c. reynolds, j. m. riordan, d. w. borhani
Keywords: lipophilic antifolates, nadp, one-carbon metabolism, oxidoreductase, reductase
- 2c2t.pdb.
oxidoreductase 29-sep-05 2c2t
B
Title: human dihydrofolate reductase complexed with nadph and 2,4- diamino-5-((7,8-dicarbaundecaboran-7-yl)methyl)-6- methylpyrimidine, a novel boron containing, nonclassical antifolate
Author: a. k. w. leung, r. c. reynolds, j. m. riordan, d. w. borhani
Keywords: lipophilic antifolates, nadp, one-carbon metabolism, oxidoreductase, reductase
- 2czf.pdb.
lyase 13-jul-05 2czf
Title: crystal structure of orotidine 5'-phosphate decarboxylase from pyrococcus horikoshii ot3 complexed with xmp
Author: k. ito, r. arai, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: rsgi
- 2dsn.pdb.
hydrolase 03-jul-06 2dsn
Cl Zn Na Ca
Title: crystal structure of t1 lipase
Author: h. matsumura, y. kai
- 2dsu.pdb.
signaling protein 07-jul-06 2dsu
Title: binding of chitin-like polysaccharide to protective signalling factor: crystal structure of the complex formed between signalling protein from sheep (sps-40) with a tetrasaccharide at 2.2 a resolution
Author: d. b. srivastava, a. s. ethayathulla, j. kumar, n. singh, s. sharma, p. kaur, a. bhushan, t. p. singh
Keywords: oligosaccharides, glycoprotein
- 2dsv.pdb.
signaling protein 07-jul-06 2dsv
Title: interactions of protective signalling factor with chitin- like polysaccharide: crystal structure of the complex between signalling protein from sheep (sps-40) and a hexasaccharide at 2.5a resolution
Author: d. b. srivastava, a. s. ethayathulla, j. kumar, n. singh, s. sharma, a. bhushan, a. srinivasan, t. p. singh
Keywords: hexasaccharide, complex, involution
- 2dsw.pdb.
signaling protein 07-jul-06 2dsw
Title: binding of chitin-like polysaccharides to protective signalling factor: crystal structure of the complex of signalling protein from sheep (sps-40) with a pentasaccharide at 2.8 a resolution
Author: d. b. srivastava, a. s. ethayathulla, j. kumar, n. singh, s. sharma, p. kaur, a. bhushan, t. p. singh
Keywords: pentasaccharide, complex
- 2dt9.pdb.
transferase 11-jul-06 2dt9
Title: crystal structure of the regulatory subunit of aspartate kinase from thermus flavus
Author: a. yoshida, t. tomita, s. fushinobu, t. kuzuyama, m. nishiyama
Keywords: regulatory subunit
- 2dtv.pdb.
transferase 17-jul-06 2dtv
Title: crystal structure of lysn, alpha-aminoadipate aminotransferase, from thermus thermophilus hb27
Author: t. tomita, t. miyazaki, t. miyagawa, s. fushinobu, t. kuzuyama, m. nishiyama
Keywords: thermus thermophilus, substrate specificity
- 2dtz.pdb.
transcription 19-jul-06 2dtz
Title: crystal structure of multidrug binding protein qacr from staphylococcus aureus cocrystallized with compound db75
Author: b. e. brooks, r. g. brennan
Keywords: db75, qacr, multidrug binding protein
- 2dzn.pdb.
protein binding 29-sep-06 2dzn
Title: crystal structure analysis of yeast nas6p complexed with the proteasome subunit, rpt3
Author: s. yokoyama, b. padmanabhan, riken structural genomics/proteomics initiative (rsgi)
Keywords: a-helical domain, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2e5t.pdb.
hydrolase 22-dec-06 2e5t
(NMR, 20 structures)
Title: c-terminal domain of epsilon subunit of f1f0-atp synthase from the thermophilic bacillus ps3 in the presence of atp condition
Author: h. yagi, h. akutsu
Keywords: f1fo atp synthase, f1-atpase, epsilon subunit, atp
- 2e5u.pdb.
hydrolase 25-dec-06 2e5u
(NMR, 20 structures)
Title: c-terminal domain of epsilon subunit of f1f0-atp synthase from the thermophilic bacillus ps3
Author: h. yagi, h. akutsu
Keywords: f1fo atp synthase, f1-atpase, epsilon subunit, atp
- 2e5y.pdb.
hydrolase 25-dec-06 2e5y
Title: epsilon subunit and atp complex of f1f0-atp synthase from the thermophilic bacillus ps3
Author: h. yagi, h. akutsu
Keywords: f1fo atp synthase, f1-atpase, epsilon subunit, atp
- 2e7i.pdb.
lyase 10-jan-07 2e7i
Title: crystal structure of sep-trna:cys-trna synthase from archaeoglobus fulgidus
Author: r. fukunaga, s. yokoyama
- 2e7j.pdb.
lyase 10-jan-07 2e7j
Title: crystal structure of sep-trna:cys-trna synthase from archaeoglobus fulgidus
Author: r. fukunaga, s. yokoyama
- 2e7m.pdb.
structural protein 11-jan-07 2e7m
(NMR, 20 structures)
Title: solution structure of the pkd domain (329-428) from human kiaa0319
Author: x. r. qin, t. nagashima, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: protein kiaa0319 precursor, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2e7n.pdb.
dna binding protein 11-jan-07 2e7n
(NMR, 20 structures)
Title: solution structure of the second bromodomain from human bromodomain-containing protein 3
Author: x. r. qin, c. kurosaki, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: bromodomain-containing protein 3, ring3-like protein, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsg...
- 2e7o.pdb.
dna binding protein 11-jan-07 2e7o
(NMR, 20 structures)
Title: solution structure of the bromodomain from human bromodomain adjacent to zinc finger domain 2b
Author: x. r. qin, c. kurosaki, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: bromodomain adjacent to zinc finger domain 2b, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2e7r.pdb.
transferase 12-jan-07 2e7r
Title: crystal structure of glu54 to arg mutant of diphthine synthase
Author: h. mizutani, y. matsuura, b. s. krishna swamy, d. k. simanshu, m. r. n. murthy, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2e7u.pdb.
isomerase 14-jan-07 2e7u
Na
Title: crystal structure of glutamate-1-semialdehyde 2,1- aminomutase from thermus thermophilus hb8
Author: h. mizutani, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
Keywords: gsa, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2e7v.pdb.
hydrolase 15-jan-07 2e7v
Title: crystal structure of sea domain of transmembrane protease from mus musculus
Author: y. xie, s. kishishita, k. murayama, c. hori-takemoto, m. shirozu, s. yokoyama, l. chen, z. j. liu, b. c. wang, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2eb4.pdb.
lyase 07-feb-07 2eb4
Na
Title: crystal structure of apo-hpcg
Author: a. izumi, d. rea, t. adachi, s. unzai, s. y. park, d. i. roper, j. r. h. tame
Keywords: hydratase
- 2eb5.pdb.
lyase 07-feb-07 2eb5
Mg
Title: crystal structure of hpcg complexed with oxalate
Author: a. izumi, d. rea, t. adachi, s. unzai, s. y. park, d. i. roper, j. r. h. tame
Keywords: hydratase
- 2eb6.pdb.
lyase 07-feb-07 2eb6
Mg
Title: crystal structure of hpcg complexed with mg ion
Author: a. izumi, d. rea, t. adachi, s. unzai, s. y. park, d. i. roper, j. r. h. tame
Keywords: hydratase
- 2ei9.pdb.
gene regulation 12-mar-07 2ei9
Title: crystal structure of r1bm endonuclease domain
Author: n. maita, h. aoyagi, m. osanai, m. shirakawa, h. fujiwara
- 2f3v.pdb.
hydrolase 22-nov-05 2f3v
(NMR, 12 structures)
Title: solution structure of 1-110 fragment of staphylococcal nuclease with v66w mutation
Author: d. liu, t. xie, y. feng, l. shan, k. ye, j. wang
- 2f3w.pdb.
hydrolase 22-nov-05 2f3w
(NMR, 12 structures)
Title: solution structure of 1-110 fragment of staphylococcal nuclease in 2m tmao
Author: d. liu, t. xie, y. feng, l. shan, k. ye, j. wang
- 2g41.pdb.
signaling protein 21-feb-06 2g41
Title: crystal structure of the complex of sheep signalling glycoprotein with chitin trimer at 3.0a resolution
Author: d. b. srivastava, a. s. ethayathulla, j. kumar, a. bhushan, s. sharma, t. p. singh
Keywords: sps-40, crystal structure
- 2gzb.pdb.
hydrolase inhibitor 11-may-06 2gzb
I
Title: bauhinia bauhinioides cruzipain inhibitor (bbci)
Author: d. hansen, s. macedo-ribeiro, m. v. a. s. navarro, r. c. garratt, m. l. v. oliva
Keywords: kunitz, cysteine proteinase inhibitor
- 2hhc.pdb.
transferase 28-jun-06 2hhc
Title: crystal structure of fucosyltransferase nodz from bradyrhizobium
Author: k. brzezinski, t. stepkowski, s. panjikar, g. bujacz, m. jaskolski
Keywords: fucosyltransferase, nodz, nodulation
- 2hlh.pdb.
transferase 07-jul-06 2hlh
Title: crystal structure of fucosyltransferase nodz from bradyrhizobium
Author: k. brzezinski, t. stepkowski, s. panjikar, g. bujacz, m. jaskolski
Keywords: fucosyltransferase, nodz, nodulation
- 2hlk.pdb.
hydrolase 08-jul-06 2hlk
Mg
Title: structure of recombinant haemophilus influenzae e(p4) acid phosphatase
Author: j. j. tanner
Keywords: dddd motif, class c nonspecific acid phosphatase
- 2hll.pdb.
hydrolase 08-jul-06 2hll
Mg W
Title: structure of recombinant haemophilus influenzae e(p4) acid phosphatase complexed with tungstate
Author: j. j. tanner
Keywords: dddd motif, class c nonspecific acid phosphatase
- 2hln.pdb.
hydrolase 08-jul-06 2hln
Title: l-asparaginase from erwinia carotovora in complex with glutamic acid
Author: o. v. kravchenko, y. a. kislitsin, a. n. popov, s. v. nikonov, i. p. kuranova
Keywords: erwinia carotovora
- 2hlo.pdb.
blood clotting 08-jul-06 2hlo
Ca
Title: crystal structure of fragment d-dimer from human fibrin complexed with gly-hydroxypro-arg-pro-amide
Author: r. f. doolittle, j. m. kollman, a. chen, l. pandi
Keywords: knob-hole interactions
- 2hn9.pdb.
transferase 12-jul-06 2hn9
Title: crystal structure of the uridine phosphorylase from salmonella typhimurium in complex with thymine and phosphate ion at 2.12a resolution
Author: a. g. gabdoulkhakov, v. i. timofeev, a. m. mikhailov
- 2hnl.pdb.
transferase 13-jul-06 2hnl
Title: structure of the prostaglandin d synthase from the parasitic nematode onchocerca volvulus
Author: m. perbandt, j. hoppner, c. betzel, e. liebau
Keywords: glutathione s-transferase, river blindness, onchocerca volvulus, immune modulation
- 2hoq.pdb.
hydrolase 16-jul-06 2hoq
Title: crystal structure of the probable haloacid dehalogenase (ph1655) from pyrococcus horikoshii ot3
Author: j. jeyakanthan, a. shinkai, s. yokoyama, y. shiro, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2hq5.pdb.
transcription 18-jul-06 2hq5
Title: crystal structure of multidrug binding protein qacr from staphylococcus aureus cocrystallized with compound db359
Author: b. e. brooks, r. g. brennan
Keywords: db359, qacr, multidrug binding protein
- 2hse.pdb.
transferase 21-jul-06 2hse
Zn
Title: structure of d236a e. coli aspartate transcarbamoylase in the presence of phosphonoacetamide and l-aspartate at 2.60 a resolution
Author: j. wang, e. r. kantrowitz
Keywords: domain closure, allosteric transition
- 2hyx.pdb.
unknown function 08-aug-06 2hyx
Title: structure of the c-terminal domain of dipz from mycobacterium tuberculosis
Author: d. goldstone, e. n. baker, p. metcalf, tb structural genomics consortium (tbsgc)
Keywords: jelly-roll, structural genomics, tb structural genomics consortium, tbsgc
- 2hz8.pdb.
de novo protein 08-aug-06 2hz8
Zn
(NMR)
Title: qm/mm structure refined from nmr-structure of a single chain diiron protein
Author: j. r. calhoun, w. liu, k. spiegel, m. dal peraro, m. l. klein, a. j. wand, w. f. degrado
- 2i9h.pdb.
oxidoreductase 05-sep-06 2i9h
(NMR, 20 structures)
Title: nmr solution structure of the reduced form of thioredoxin 1 from yeast (trx1)
Author: a. s. pinheiro, g. c. amorim, f. c. l. almeida, a. p. valente
Keywords: yeast, oxireductase
- 2ijy.pdb.
oxidoreductase 02-oct-06 2ijy
(NMR, 22 structures)
Title: nmr structure ensemble for the reduced dsba disulphide oxidoreductase from vibrio cholerae
Author: j. h. horne, t. velkov, m. j. scanlon
Keywords: helical domain insert
- 2imf.pdb.
transferase 04-oct-06 2imf
Title: 2-hydroxychromene-2-carboxylate isomerase: a kappa class glutathione-s-transferase from pseudomonas putida
Author: l. c. thompson, j. e. ladner, s. g. codreanu, j. harp, g. l. gilliland, r. n. armstrong
Keywords: glutathione, kgst, kappa gst
- 2iof.pdb.
hydrolase 10-oct-06 2iof
Mg
Title: crystal structure of phosphonoacetaldehyde hydrolase with sodium borohydride-reduced substrate intermediate
Author: k. a. allen, s. d. lahiri, g. zhang, d. dunaway-mariano
Keywords: haloacid dehalogenase superfamily
- 2ixd.pdb.
hydrolase 07-jul-06 2ixd
Zn
Title: crystal structure of the putative deacetylase bc1534 from bacilus cereus
Author: v. e. fadouloglou, v. bouriotis, m. kokkinidis
Keywords: deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase
- 2iy2.pdb.
chaperone 12-jul-06 2iy2
Cd
Title: crystal structure of the n-terminal dimer domain of e.coli dsbg
Author: s. -m. yeh, p. metcalf
Keywords: dsbg, chaperone, periplasmic, redox-active center, disulfide bond isomerase
- 2j5e.pdb.
transferase 14-sep-06 2j5e
Cl
Title: crystal structure of egfr kinase domain in complex with an irreversible inhibitor 13-jab
Author: c. -h. yun, m. j. eck
Keywords: nucleotide-binding, alternative splicing, ubl conjugation, phosphorylation, disease mutation, glycoprotein
- 2j5f.pdb.
transferase 14-sep-06 2j5f
Br
Title: crystal structure of egfr kinase domain in complex with an irreversible inhibitor 34-jab
Author: c. -h. yun, m. j. eck
Keywords: nucleotide-binding, alternative splicing, ubl conjugation, phosphorylation, disease mutation, glycoprotein
- 2jc3.pdb.
transferase 19-dec-06 2jc3
Title: structure of o-acetylserine sulfhydrylase b from salmonella typhimurium
Author: a. chattopadhyay, w. m. rabeh, f. speroni, m. meier, s. ivaninskii, a. mozzarelli, p. burkhard, p. f. cook
Keywords: sulfhydrylase, pyridoxal phosphate, vitamin b6 dependent enzyme, cysteine biosynthesis, amino-acid biosynthesis
- 2je2.pdb.
metal binding protein 13-jan-07 2je2
Fe
Title: cytochrome p460 from nitrosomonas europaea - probable nonphysiological oxidized form
Author: a. r. pearson, b. o. elmore, c. yang, j. d. ferrara, a. b. hooper, c. m. wilmot
Keywords: cytochrome p460, cross-linked heme, metal binding protein
- 2je3.pdb.
metal binding protein 13-jan-07 2je3
Fe
Title: cytochrome p460 from nitrosomonas europaea - probable physiological form
Author: a. r. pearson, b. o. elmore, c. yang, j. d. ferrara, a. b. hooper, c. m. wilmot
Keywords: cytochrome p460, cross-linked heme, metal binding protein
- 2ji6.pdb.
lyase 26-feb-07 2ji6
Mg
Title: x-ray structure of oxalyl-coa decarboxylase in complex with 3-deaza-thdp and oxalyl-coa
Author: c. l. berthold, c. g. toyota, p. moussatche, m. d. wood, f. leeper, n. g. j. richards, y. lindqvist
Keywords: flavoprotein, decarboxylase, thiamin diphosphate-dependent, substrate complex, oxalate degradation, thiamine pyrophosphate, non- oxidative decarboxylase
- 2ji7.pdb.
lyase 26-feb-07 2ji7
Mg
Title: x-ray structure of oxalyl-coa decarboxylase with covalent reaction intermediate
Author: c. l. berthold, c. g. toyota, p. moussatche, m. d. wood, f. leeper, n. g. j. richards, y. lindqvist
Keywords: flavoprotein, decarboxylase, oxalate degradation, intermediate complex, thiamin diphosphate-dependent, thiamine pyrophosphate, non- oxidative decarboxylase
- 2ji8.pdb.
lyase 26-feb-07 2ji8
Mg
Title: x-ray structure of oxalyl-coa decarboxylase in complex with formyl-coa
Author: c. l. berthold, c. g. toyota, p. moussatche, m. d. wood, f. leeper, n. g. j. richards, y. lindqvist
Keywords: thiamine pyrophosphate, non- oxidative decarboxylase, lyase, flavoprotein, decarboxylase, product complex, thiamin diphosphate-dependent
- 2ji9.pdb.
lyase 26-feb-07 2ji9
Mg
Title: x-ray structure of oxalyl-coa decarboxylase in complex with 3-deaza-thdp
Author: c. l. berthold, c. g. toyota, p. moussatche, m. d. wood, f. leeper, n. g. j. richards, y. lindqvist
Keywords: thiamine pyrophosphate, lyase, flavoprotein, decarboxylase, cofactor analogue inhibitor complex, non- oxidative decarboxylase, thiamin diphosphate-dependent
- 2jib.pdb.
lyase 26-feb-07 2jib
Mg
Title: x-ray structure of oxalyl-coa decarboxylase in complex with coenzyme-a
Author: c. l. berthold, c. g. toyota, p. moussatche, m. d. wood, f. leeper, n. g. j. richards, y. lindqvist
Keywords: flavoprotein, decarboxylase, thiamin diphosphate-dependent, substrate complex, oxalate degradation, thiamine pyrophosphate, non- oxidative decarboxylase
- 2jm4.pdb.
signaling protein 09-oct-06 2jm4
Ca
(NMR, 24 structures)
Title: the solution nmr structure of the relaxin (rxfp1) receptor ldla module.
Author: e. j. hopkins, r. a. d. bathgate, p. r. gooley
Keywords: rxfp1 receptor, lgr7
- 2jmp.pdb.
dna binding protein 27-nov-06 2jmp
(NMR, 20 structures)
Title: structure for the n-terminus of chromosomal replication initiation protein dnaa from m. genitalium
Author: t. j. lowery, j. g. pelton, d. e. wemmer, berkeley structural genomics center (bsgc)
Keywords: domain, protein, structural genomics, psi, protein structure initiative, berkeley structural genomics center, bsgc
- 2jmy.pdb.
antimicrobial protein 13-dec-06 2jmy
(NMR, 19 structures)
Title: solution structure of cm15 in dpc micelles
Author: m. respondek, t. madl, c. goebl, r. golser, k. zangger
Keywords: nmr, dpc micelle
- 2jqf.pdb.
viral protein 01-jun-07 2jqf
(NMR, 10 structures)
Title: full length leader protease of foot and mouth disease virus c51a mutant
Author: r. cencic, c. mayer, m. a. juliano, l. juliano, r. konrat, g. kontaxis, t. skern
Keywords: protease, leader, foot and mouth disease virus, oligimerisation
- 2jrb.pdb.
rna binding protein 21-jun-07 2jrb
(NMR, 40 structures)
Title: c-terminal domain of orf1p from mouse line-1
Author: k. januszyk, r. clubb
- 2jrf.pdb.
structural genomics, unknown function 25-jun-07 2jrf
(NMR, 20 structures)
Title: solution nmr structure of tubulin polymerization-promoting protein family member 3 from homo sapiens. northeast structural genomics target hr387.
Author: j. m. aramini, p. rossi, r. shastry, c. nwosu, k. cunningham, r. xiao, j. liu, m. c. baran, p. k. rajan, t. b. acton, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2jrm.pdb.
structural genomics, unknown function 27-jun-07 2jrm
(NMR, 20 structures)
Title: solution nmr structure of ribosome modulation factor vp1593 from vibrio parahaemolyticus. northeast structural genomics target vpr55
Author: y. tang, p. rossi, g. swapna, h. wang, m. jiang, k. cunningham, l. owens, l. ma, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2jrr.pdb.
structural genomics, unknown function 28-jun-07 2jrr
(NMR, 20 structures)
Title: solution nmr structure of q5lls5 from silicibacter pomeroyi. northeast structural genomics consortium target sir90
Author: g. v. t. swapna, r. tejero, m. jiang, k. cunningham, m. maglaqui, l. owens, j. liu, h. wang, t. b. acton, r. xiao, m. c. baran, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: protein, sir90, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2nq8.pdb.
oxidoreductase 30-oct-06 2nq8
Zn
Title: malarial enoyl acyl acp reductase bound with inh-nad adduct
Author: j. s. freundlich, m. yu, e. lucumi, m. kuo, h. c. tsai, j. c. valderramos, l. karagyozov, w. r. jacobs jr. , g. a. schiehser, d. a. fidock, d. p. jacobus, j. c. sacchettini
- 2o8a.pdb.
hydrolase/inhibitor 12-dec-06 2o8a
Title: rat pp1cgamma complexed with mouse inhibitor-2
Author: t. d. hurley
Keywords: inhibitor-2
- 2o8g.pdb.
hydrolase/inhibitor 12-dec-06 2o8g
Mn
Title: rat pp1c gamma complexed with mouse inhibitor-2
Author: t. d. hurley
Keywords: inhibitor-2
- 2o8k.pdb.
transcription/dna 12-dec-06 2o8k
(NMR, 20 structures)
Title: nmr structure of the sigma-54 rpon domain bound to the-24 promoter element
Author: m. doucleff, j. g. pelton, p. s. lee, d. e. wemmer
Keywords: helix-turn-helix, transcription factor, sigma-54, rna polymerase
- 2o95.pdb.
unknown function 13-dec-06 2o95
Title: crystal structure of the metal-free dimeric human mov34 mpn domain (residues 1-186)
Author: m. sanches, b. s. c. alves, n. i. t. zanchin, b. g. guimaraes
Keywords: 26s proteasome, mov34, jab1/mpn, metal-free dimer
- 2o96.pdb.
unknown function 13-dec-06 2o96
Title: crystal structure of the metal-free dimeric human mov34 mpn domain (residues 1-177)
Author: m. sanches, b. s. c. alves, n. i. t. zanchin, b. g. guimaraes
Keywords: 26s proteasome subunit, mov34, jab1/mpn, metal-free dimer
- 2o9l.pdb.
rna polymerase sigma factor rpon/dna 13-dec-06 2o9l
(NMR, 19 structures)
Title: amber refined nmr structure of the sigma-54 rpon domain bound to the-24 promoter element
Author: m. doucleff, j. g. pelton, p. s. lee, d. e. wemmer
Keywords: generalized born solvent model, protein-dna complex, helix-turn-helix, transcription factor, sigma-54, rna polymerase
- 2od1.pdb.
metal binding protein 21-dec-06 2od1
Zn
(NMR, 31 structures)
Title: solution structure of the mynd domain from human aml1-eto
Author: y. z. liu, w. chen, j. gaudet, m. d. cheney, l. roudaia, t. cierpicki, r. c. klet, k. hartman, t. m. laue, n. a. speck, j. h. bushweller
Keywords: cross-braced topology
- 2odd.pdb.
metal binding protein 22-dec-06 2odd
Zn
(NMR, 25 structures)
Title: solution structure of the mynd domain from aml1-eto complexed with smrt, a corepressor
Author: y. z. liu, w. chen, j. gaudet, m. d. cheney, l. roudaia, t. cierpicki, r. c. klet, k. hartman, t. m. laue, n. a. speck, j. h. bushweller
Keywords: cross-braced topology, poly-proline, proline-tryptophan interaction
- 2oip.pdb.
transferase, oxidoreductase 11-jan-07 2oip
Title: crystal structure of the s290g active site mutant of ts- dhfr from cryptosporidium hominis
Author: w. e. martucci, m. a. vargo
- 2ol4.pdb.
oxidoreductase 18-jan-07 2ol4
Cl
Title: crystal structure of plasmodium falciparum enoyl acp reductase with triclosan reductase
Author: h. tsai
Keywords: malaria, triclosan analog
- 2old.pdb.
immune system 19-jan-07 2old
Title: bence jones kwr protein- immunoglobulin light chain dimer, p3(2)21 crystal form
Author: d. l. makino, s. b. larson, a. mcpherson
- 2omb.pdb.
immune system 21-jan-07 2omb
Title: bence jones kwr protein- immunoglobulin light chain dimer, p3(1)21 crystal form
Author: d. l. makino, s. b. larson, a. mcpherson
- 2omn.pdb.
immune system 22-jan-07 2omn
Title: bence jones kwr protein- immunoglobulin light chain dimer, p4(3)2(1)2 crystal form
Author: d. l. makino, s. b. larson, a. mcpherson
- 2on3.pdb.
lyase 23-jan-07 2on3
Title: a structural insight into the inhibition of human and leishmania donovani ornithine decarboxylases by 3-aminooxy- 1-aminopropane
Author: v. t. dufe, d. ingner, o. heby, a. r. khomutov, l. persson, s. al- karadaghi
Keywords: sheet
- 2oo0.pdb.
lyase 25-jan-07 2oo0
Title: a structural insight into the inhibition of human and leishmania donovani ornithine decarboxylases by 3-aminooxy- 1-aminopropane
Author: v. t. dufe, d. ingner, a. r. khomutov, o. heby, l. persson, s. al- karadaghi
Keywords: sheet
- 2oos.pdb.
oxidoreductase 26-jan-07 2oos
Cl
Title: crystal structure of plasmodium falciparum enoyl acp reductase with triclosan reductase
Author: h. tsai
Keywords: malaria, triclosan analog
- 2oov.pdb.
oxidoreductase 26-jan-07 2oov
Cu
Title: crystal structure of hansenula polymorpha amine oxidase to 1.7 angstroms
Author: b. j. johnson, c. m. wilmot
Keywords: beta-sandwich, tpq
- 2op0.pdb.
oxidoreductase 26-jan-07 2op0
Cl
Title: crystal structure of plasmodium falciparum enoyl acp reductase with triclosan reductase
Author: h. tsai
Keywords: malaria, triclosan analog
- 2op1.pdb.
oxidoreductase 26-jan-07 2op1
Cl
Title: crystal structure of plasmodium falciparum enoyl acp reductase with triclosan reductase
Author: h. tsai
Keywords: malaria, triclosan analog
- 2op9.pdb.
hydrolase 27-jan-07 2op9
Title: substrate specificity profiling and identification of a new class of inhibitor for the major protease of the sars coronavirus
Author: c. s. craik, d. h. goetz
Keywords: 3clpro, proteinase, protease
- 2oqe.pdb.
oxidoreductase 31-jan-07 2oqe
Cu Xe
Title: crystal structure of hansenula polymorpha amine oxidase in complex with xe to 1.6 angstroms
Author: b. j. johnson, c. m. wilmot
Keywords: tpq, xe, xenon complex
- 2orl.pdb.
electron transport 03-feb-07 2orl
Fe
(NMR, 25 structures)
Title: solution structure of the cytochrome c- para-aminophenol adduct
Author: m. assfalg, i. bertini, r. del conte, a. giachetti, p. turano
- 2p15.pdb.
hormone receptor 02-mar-07 2p15
F
Title: crystal structure of the er alpha ligand binding domain with the agonist ortho-trifluoromethylphenylvinyl estradiol
Author: j. b. bruning, k. w. nettles, g. l. greene, y. kim
Keywords: ligand binding domain, helix 12
- 2p1f.pdb.
hydrolase 05-mar-07 2p1f
Na
Title: human ump synthase (c-terminal domain-orotidine 5'- monophosphate decarboxylase)
Author: y. liu, h. l. tang, e. f. pai
Keywords: c-terminal domain, orotidine 5'-monophosphate decarboxylase, human
- 2p6r.pdb.
dna binding protein/dna 19-mar-07 2p6r
Title: crystal structure of superfamily 2 helicase hel308 in complex with unwound dna
Author: k. buettner, s. nehring, k. p. hopfner
Keywords: sf2 helicase, archaeal helicase, dna repair,
- 2p6u.pdb.
dna binding protein 19-mar-07 2p6u
Title: apo structure of the hel308 superfamily 2 helicase
Author: k. buettner, s. nehring, k. p. hopfner
Keywords: sf2 helicase, dna repair
- 2p7k.pdb.
metal binding protein, hydrolase 20-mar-07 2p7k
Title: crystal structure of genomically encoded fosfomycin resistance protein, fosx, from listeria monocytogenes (hexagonal form)
Author: k. l. fillgrove, s. pakhomova, m. schaab, m. e. newcomer, r. n. armstrong
Keywords: mn binding, antibiotic resistance
- 2p7l.pdb.
metal binding protein, hydrolase 20-mar-07 2p7l
Title: crystal structure of monoclinic form of genomically encoded fosfomycin resistance protein, fosx, from listeria monocytogenes at ph 5.75
Author: k. l. fillgrove, s. pakhomova, m. schaab, m. e. newcomer, r. n. armstrong
Keywords: mn binding, antibiotic resistance
- 2p7m.pdb.
metal binding protein, hydrolase 20-mar-07 2p7m
Title: crystal structure of monoclinic form of genomically encoded fosfomycin resistance protein, fosx, from listeria monocytogenes at ph 6.5
Author: k. l. fillgrove, s. pakhomova, m. schaab, m. e. newcomer, r. n. armstrong
Keywords: mn binding, antibiotic resistance
- 2p7o.pdb.
metal binding protein, hydrolase 20-mar-07 2p7o
Mn
Title: crystal structure of genomically encoded fosfomycin resistance protein, fosx, from listeria monocytogenes (tetragonal form)
Author: k. l. fillgrove, s. pakhomova, m. schaab, m. e. newcomer, r. n. armstrong
Keywords: mn binding, antibiotic resistance
- 2p7p.pdb.
metal binding protein, hydrolase 20-mar-07 2p7p
Mn
Title: crystal structure of genomically encoded fosfomycin resistance protein, fosx, from listeria monocytogenes complexed with mn(ii) and sulfate ion
Author: k. l. fillgrove, s. pakhomova, m. schaab, m. e. newcomer, r. n. armstrong
Keywords: mn binding, antibiotic resistance
- 2p7q.pdb.
metal binding protein, hydrolase 20-mar-07 2p7q
Mn
Title: crystal structure of e126q mutant of genomically encoded fosfomycin resistance protein, fosx, from listeria monocytogenes complexed with mn(ii) and 1s,2s- dihydroxypropylphosphonic acid
Author: k. l. fillgrove, s. pakhomova, m. schaab, m. e. newcomer, r. n. armstrong
Keywords: mn binding, antibiotic resistance
- 2p9c.pdb.
oxidoreductase 24-mar-07 2p9c
Title: crystal structure of serine bound g336v mutant of e.coli phosphoglycerate dehydrogenase
Author: s. dey, j. c. sacchettini
Keywords: phosphoglycerate dehydrogenase
- 2p9e.pdb.
oxidoreductase 25-mar-07 2p9e
Title: crystal structure of g336v mutant of e.coli phosphoglycerate dehydrogenase
Author: s. dey, j. c. sacchettini
Keywords: g336v mutant, phosphoglycerate dehydrogenase, serine biosynthesis
- 2p9g.pdb.
oxidoreductase 25-mar-07 2p9g
Title: crystal structure of serine bound g336v,g337v double mutant of e.coli phosphoglycerate dehydrogenase
Author: s. dey, j. c. sacchettini
Keywords: serine biosynthesis, d-3-phosphoglycerate dehydrogenase, double mutation
- 2p9h.pdb.
transcription 26-mar-07 2p9h
Title: high resolution structure of the lactose repressor bound to iptg
Author: r. daber
Keywords: allosteric effectors, gene regulation
- 2pa3.pdb.
oxidoreductase 27-mar-07 2pa3
Title: crystal structure of serine bound g336v mutant of e.coli phosphoglycerate dehydrogenase
Author: s. dey, j. c. sacchettini
Keywords: phosphoglycerate dehydrogenase, serine biosynthesis
- 2paf.pdb.
transcription 27-mar-07 2paf
Title: crystal structure of the lactose repressor bound to anti- inducer onpf in induced state
Author: r. daber
Keywords: allosteric effectors, gene regulation
- 2pe0.pdb.
transferase 01-apr-07 2pe0
Title: crystal structure of human phosphoinositide-dependent protein kinase 1 (pdk1) 5-hydroxy-3-[1-(1h-pyrrol-2-yl)- eth-(z)-ylidene]-1,3-dihydro-indol-2-one complex
Author: m. whitlow, m. adler
Keywords: serine kinase
- 2pe1.pdb.
transferase 01-apr-07 2pe1
Title: crystal structure of human phosphoinositide-dependent protein kinase 1 (pdk1) {2-oxo-3-[1-(1h-pyrrol-2-yl)-eth- (z)-ylidene]-2,3-dihydro-1h-indol-5-yl}-urea {bx-517} complex
Author: m. whitlow, m. adler
Keywords: serine kinase
- 2pe2.pdb.
transferase 01-apr-07 2pe2
Title: crystal structure of human phosphoinositide-dependent protein kinase 1 (pdk1) 3-{5-[2-oxo-5-ureido-1,2-dihydro- indol-(3z)-ylidenemethyl]-1h-pyrrol-3-yl}-n-(2-piperidin-1- yl-ethyl)-benzamide complex
Author: m. whitlow, m. adler
Keywords: serine kinase
- 2pee.pdb.
hydrolase inhibitor 02-apr-07 2pee
Title: crystal structure of a thermophilic serpin, tengpin, in the native state
Author: q. w. zhang, a. m. buckle, j. c. whisstock
- 2pef.pdb.
protease inhibitor 03-apr-07 2pef
Title: crystal structure of a thermophilic serpin, tengpin, in the latent state
Author: q. w. zhang, a. m. buckle, j. c. whisstock
- 2pff.pdb.
transferase 04-apr-07 2pff
Title: structural insights of yeast fatty acid synthase
Author: y. xiong, i. b. lomakin, t. a. steitz
Keywords: acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase, enoyl-[acyl- carrier-protein] reductase, acetyltransferase, malonyltransferase
- 2pg1.pdb.
structural protein 06-apr-07 2pg1
Se
Title: structural analysis of a cytoplasmic dynein light chain- intermediate chain complex
Author: j. c. williams, w. a. hendrickson
Keywords: dynein light chain, lc8, pin, tctex1
- 2pgb.pdb.
hydrolase 09-apr-07 2pgb
Title: inhibitor-free human thrombin mutant c191a-c220a
Author: l. a. bush-pelc, f. marino, z. chen, a. o. pineda, f. s. mathews, e. di cera
- 2pgq.pdb.
hydrolase 10-apr-07 2pgq
Zn
Title: human thrombin mutant c191a-c220a in complex with the inhibitor ppack
Author: l. a. bush-pelc, f. marino, z. chen, a. o. pineda, f. s. mathews, e. di cera
- 2pl6.pdb.
structural protein 19-apr-07 2pl6
Title: monoclinic crystal structure of hydrophobin hfbii in presence of a detergent
Author: j. m. kallio, j. p. rouvinen
Keywords: amphiphile, protein surfactant
- 2pl7.pdb.
surface active protein 19-apr-07 2pl7
Title: orhorhombic crystal structure of hydrophobin hfbii in the presence of a detergent
Author: j. m. kallio, j. p. rouvinen
Keywords: amphiphile, protein surfactant
- 2plj.pdb.
lyase 19-apr-07 2plj
Mg
Title: crystal structure of lysine/ornithine decarboxylase complexed with putrescine from vibrio vulnificus
Author: j. lee, e. j. goldsmith, m. a. phillips
Keywords: beta/alpha barrel, beta barrel
- 2plk.pdb.
lyase 19-apr-07 2plk
Title: crystal structure of lysine/ornithine decarboxylase complexed with cadaverine from vibrio vulnificus
Author: j. lee, e. j. goldsmith, m. a. phillips
Keywords: beta/alpha barrel, beta barrel
- 2plm.pdb.
unknown function 20-apr-07 2plm
Zn
Title: crystal structure of the protein tm0936 from thermotoga maritima complexed with zn and s-inosylhomocysteine
Author: a. a. fedorov, e. v. fedorov, j. c. hermann, r. marti-arbona, b. k. shoichet, f. m. raushel, s. c. almo
Keywords: function prediction, amidohydrolase
- 2pm6.pdb.
protein transport 20-apr-07 2pm6
Title: crystal structure of yeast sec13/31 edge element of the copii vesicular coat, native version
Author: j. goldberg, s. fath, j. d. mancias, x. bi
Keywords: alpha solenoid
- 2pm7.pdb.
protein transport 20-apr-07 2pm7
Se
Title: crystal structure of yeast sec13/31 edge element of the copii vesicular coat, selenomethionine version
Author: j. goldberg, s. fath, j. d. mancias, x. bi
Keywords: alpha solenoid
- 2pm9.pdb.
protein transport 20-apr-07 2pm9
Title: crystal structure of yeast sec13/31 vertex element of the copii vesicular coat
Author: j. goldberg, s. fath, j. d. mancias, x. bi
- 2pox.pdb.
fluorescent protein 27-apr-07 2pox
Title: crystal structure of fluorescent protein dronpa
Author: s. trowitzsch, g. weber, m. c. wahl
- 2pp4.pdb.
transcription 27-apr-07 2pp4
(NMR, 20 structures)
Title: solution structure of eto-tafh refined in explicit solvent
Author: y. wei, s. liu, j. lausen, c. woodrell, s. cho, n. biris, n. kobayashi, s. yokoyama, m. h. werner
Keywords: leukemia, 4-helix bundle
- 2ppb.pdb.
transferase/dna/rna 28-apr-07 2ppb
Mg Zn
Title: crystal structure of the t. thermophilus rnap polymerase elongation complex with the ntp substrate analog and antibiotic streptolydigin
Author: d. g. vassylyev, m. n. vassylyeva, i. artsimovitch, r. landick
Keywords: elongation complex, template dna, non- template dna, rna transcript, ntp substrate, antibiotic streptolydigin
- 2pu5.pdb.
hydrolase 08-may-07 2pu5
Title: crystal structure of a c-c bond hydrolase, bphd, from burkholderia xenovorans lb400
Author: s. bhowmik, j. t. bolin
- 2pu6.pdb.
hydrolase 08-may-07 2pu6
Na
Title: crystal structure of s112a mutant of a c-c hydrolase, bphd from burkholderia xenovorans lb400
Author: s. bhowmik, j. t. bolin
- 2pu7.pdb.
hydrolase 08-may-07 2pu7
Na
Title: crystal structure of s112a/h265a double mutant of a c-c hydrolase, bphd, from burkholderia xenovorans lb400
Author: s. bhowmik, j. t. bolin
- 2puh.pdb.
hydrolase 09-may-07 2puh
Na
Title: crystal structure of the s112a mutant of a c-c hydrolase, bphd from burkholderia xenovorans lb400, in complex with its substrate hopda
Author: s. bhowmik, j. t. bolin
- 2puj.pdb.
hydrolase 09-may-07 2puj
Na
Title: crystal structure of the s112a/h265a double mutant of a c-c hydrolase, bphd from burkholderia xenovorans lb400, in complex with its substrate hopda
Author: s. bhowmik, j. t. bolin
- 2pux.pdb.
hydrolase 09-may-07 2pux
Title: crystal structure of murine thrombin in complex with the extracellular fragment of murine par3
Author: a. bah, z. chen, l. a. bush-pelc, f. s. mathews, e. di cera
- 2pv9.pdb.
hydrolase 09-may-07 2pv9
Title: crystal structure of murine thrombin in complex with the extracellular fragment of murine par4
Author: a. bah, z. chen, l. a. bush-pelc, f. s. mathews, e. di cera
- 2py1.pdb.
lipid binding protein 15-may-07 2py1
(NMR, 10 structures)
Title: solution structure of human liver fatty acid binding protein
Author: d. long, d. yang
- 2py5.pdb.
replication, transferase/dna 15-may-07 2py5
Title: phi29 dna polymerase complexed with single-stranded dna
Author: a. j. berman, s. kamtekar, j. l. goodman, j. m. lazaro, m. de vega, l. blanco, m. salas, t. a. steitz
- 2pyj.pdb.
replication, transferase/dna 16-may-07 2pyj
Mg Mn
Title: phi29 dna polymerase complexed with primer-template dna and incoming nucleotide substrates (ternary complex)
Author: a. j. berman, s. kamtekar, j. l. goodman, j. m. lazaro, m. de vega, l. blanco, m. salas, t. a. steitz
- 2pyl.pdb.
replication, transferase/dna 16-may-07 2pyl
Mg
Title: phi29 dna polymerase complexed with primer-template dna and incoming nucleotide substrates (ternary complex)
Author: a. j. berman, s. kamtekar, j. l. goodman, j. m. lazaro, m. de vega, l. blanco, m. salas, t. a. steitz
- 2pzs.pdb.
replication, transferase/dna 18-may-07 2pzs
Title: phi29 dna polymerase complexed with primer-template dna (post-translocation binary complex)
Author: a. j. berman, s. kamtekar, j. l. goodman, j. m. lazaro, m. de vega, l. blanco, m. salas, t. a. steitz
- 2q0r.pdb.
structural protein 22-may-07 2q0r
Ca
Title: structure of pectenotoxin-2 bound to actin
Author: j. s. allingham, c. o. miles, i. rayment
Keywords: actin, anti-tumor, filament capping, natural product, cytotoxin, macrolide
- 2q0u.pdb.
structural protein 22-may-07 2q0u
Ca
Title: structure of pectenotoxin-2 and latrunculin b bound to actin
Author: j. s. allingham, c. o. miles, i. rayment
Keywords: latrunculin b, actin, anti-tumor, filament capping, natural product, cytotoxin, macrolide
- 2q1l.pdb.
oxidoreductase 24-may-07 2q1l
F
Title: design and synthesis of pyrrole-based, hepatoselective hmg- coa reductase inhibitors
Author: a. pavlovsky, pfefferkorn, j. a. , m. s. harris, b. c. finzel
Keywords: cholesterol biosynthesis, hmg-coa, nadph, statin
- 2q2b.pdb.
hydrolase 27-may-07 2q2b
Title: crystal structure of the c-terminal domain of mouse acyl- coa thioesterase 7
Author: g. guncar, j. k. forwood, b. kobe
Keywords: c-terminal domain
- 2q6b.pdb.
oxidoreductase 04-jun-07 2q6b
F
Title: design and synthesis of novel, conformationally restricted hmg-coa reductase inhibitors
Author: a. pavlovsky, j. a. pfefferkorn, m. s. harris, b. c. finzel
Keywords: cholesterol biosynthesis, hmg-coa, nadph, statin
- 2q6c.pdb.
oxidoreductase 04-jun-07 2q6c
F
Title: design and synthesis of novel, conformationally restricted hmg-coa reductase inhibitors
Author: a. pavlovsky, j. a. pfefferkorn, m. s. harris, b. c. finzel
Keywords: cholesterol biosynthesis, hmg-coa, nadph, statin
- 2q6j.pdb.
transcription 05-jun-07 2q6j
B F
Title: crystal structure of estrogen receptor alpha complexed to a b-n substituted ligand
Author: h. zhou, k. w. nettles, j. b. bruning, y. kim, a. joachimiak, s. sharma, k. e. carlson, f. stossi, b. s. katzenellenbogen, g. l. greene, j. a. katzenellenbogen
- 2qca.pdb.
hydrolase 19-jun-07 2qca
Title: a new crystal form of bovine pancreatic rnase a in complex with 2'-deoxyguanosine-5'-monophosphate
Author: s. b. larson, j. s. day, r. cudney, a. mcpherson, center for high- throughput structural biology (chtsb)
Keywords: protein-nucleotide complex, structural genomics, psi-2, protein structure initiative, center for high-throughput structural biology, chtsb
- 2qds.pdb.
hydrolase 21-jun-07 2qds
Zn
Title: crystal structure of the zinc carbapenemase cpha in complex with the inhibitor d-captopril
Author: g. garau, o. dideberg
Keywords: lactamase, inhibitor, zn, metal
- 2qe3.pdb.
cytokine 22-jun-07 2qe3
Cl
Title: crystal structure of human tl1a extracellular domain
Author: c. zhan, q. yan, y. patskovsky, w. shi, r. toro, j. bonanno, s. g. nathenson, s. c. almo
Keywords: tnfsf, cytokine;
- 2qer.pdb.
isomerase 26-jun-07 2qer
Title: crystal structure of cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_1660 in the presence of dipeptide ala-pro
Author: a. k. wernimont, j. lew, t. hills, a. hassanali, l. lin, g. wasney, y. zhao, i. kozieradzki, m. vedadi, m. schapira, a. bochkarev, a. m. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, r. hui, j. d. artz, m. amani, structural genomics consortium (sgc)
Keywords: parvum, malaria, cyclophilin, structural genomics, structural genomics consortium, sgc
- 2qeu.pdb.
lyase 26-jun-07 2qeu
Se
Title: crystal structure of putative carboxymuconolactone decarboxylase (yp_555818.1) from burkholderia xenovorans lb400 at 1.65 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative carboxymuconolactone decarboxylase, carboxymuconolactone decarboxylase family, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2qf9.pdb.
structural genomics, unknown function 27-jun-07 2qf9
Se
Title: crystal structure of putative secreted protein duf305 from streptomyces coelicolor
Author: u. a. ramagopal, m. rutter, j. adams, r. toro, c. groshong, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: duf305, q8ck01, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
- 2qg3.pdb.
structural genomics, unknown function 28-jun-07 2qg3
Se
Title: crystal structure of uncharacterized protein af2059 (2648472) from archaeoglobus fulgidus at 1.95 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: uncharacterized protein af2059, tyw3 like, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2qgg.pdb.
structural genomics, unknown function 28-jun-07 2qgg
K Se
Title: x-ray structure of the protein q6f7i0 from acinetobacter calcoaceticus amms 248. northeast structural genomics consortium target asr73.
Author: a. p. kuzin, m. su, s. jayaraman, d. wang, h. janjua, k. cunningham, l- c. ma, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: nesg, asr73, acinetobacter calcoaceticus, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
- 2qgn.pdb.
transferase 29-jun-07 2qgn
Se
Title: crystal structure of trna isopentenylpyrophosphate transferase (bh2366) from bacillus halodurans, northeast structural genomics consortium target bhr41.
Author: f. forouhar, h. neely, m. abashidze, j. seetharaman, r. shastry, h. janjua, k. cunningham, l-c. ma, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2qgq.pdb.
structural genomics, unknown function 29-jun-07 2qgq
Se
Title: crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77
Author: f. forouhar, h. neely, m. hussain, j. seetharaman, y. fang, c. x. chen, k. cunningham, k. conover, l-c. ma, r. xiao, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2qgs.pdb.
structural genomics, unknown function 29-jun-07 2qgs
Zn Se
Title: crystal structure of se1688 protein from staphylococcus epidermidis. northeast structural genomics consortium target ser89
Author: f. forouhar, m. su, j. benach, j. seetharaman, c. x. chen, y. fang, k. cunningham, l. owen, l-c. ma, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2qgv.pdb.
structural genomics, unknown function 29-jun-07 2qgv
Se
Title: crystal structure of hydrogenase-1 operon protein hyae from shigella flexneri. northeast structural genomics consortium target sfr170
Author: f. forouhar, m. su, j. seetharaman, j. benach, d. wang, y. fang, k. cunningham, l-c. ma, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2qh0.pdb.
lyase 29-jun-07 2qh0
Zn
Title: crystal structure of a glyoxalase from clostridium acetobutylicum
Author: k. n. rao, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
Keywords: glyoxalase, 11003p, clostridium acetobutylicum, psi-2, nysgxrc, structural genomics, protein structure initiative, new york structural genomix research consortium
- 2qh5.pdb.
isomerase 29-jun-07 2qh5
Title: crystal structure of mannose-6-phosphate isomerase from helicobacter pylori
Author: y. patskovsky, u. ramagopal, r. toro, j. m. sauder, m. dickey, m. iizuka, m. maletic, s. r. wasserman, j. koss, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: structural genomics, psi, protein structure initiative, nysgrc, new york structural genomics research consortium, new york structural genomix research consortium, nysgxrc
- 2qhq.pdb.
structural genomics, unknown function 02-jul-07 2qhq
Se
Title: crystal structure of unknown function protein vpa0580
Author: c. chang, y. kim, l-e. l. volkart, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: unknown function protein, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2qii.pdb.
transferase 04-jul-07 2qii
Zn
Title: crystal structure of trna-guanine transglycosylase (tgt) from zymomonas mobilis complexed with archaeosine precursor, preq0
Author: n. tidten, r. brenk, a. heine, k. reuter, g. klebe
- 2qiw.pdb.
structural genomics, unknown function 05-jul-07 2qiw
Cl Se
Title: crystal structure of putative pep phosphonomutase (np_600288.1) from corynebacterium glutamicum atcc 13032 kitasato at 1.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative pep phosphonomutase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2qjl.pdb.
signaling protein 07-jul-07 2qjl
Mg
Title: crystal structure of urm1
Author: j. yu, c. -z. zhou
- 2uuh.pdb.
lyase 02-mar-07 2uuh
Ni
Title: crystal structure of human leukotriene c4 synthase in complex with substrate glutathione
Author: d. martinez molina, a. wetterholm, a. kohl, a. a. mccarthy, d. niegowski, e. ohlson, t. hammarberg, s. eshaghi, j. z. haeggstrom, p. nordlund
Keywords: leukotriene signalling, lyase, mapeg, human, ltc4s, enzyme, trimer, membrane, leukotriene biosynthesis, eicosanoid, glutathione, transmembrane
- 2uui.pdb.
lyase 02-mar-07 2uui
Ni
Title: crystal structure of human leukotriene c4 synthase
Author: d. martinez molina, a. wetterholm, a. kohl, a. a. mccarthy, d. niegowski, e. ohlson, t. hammarberg, s. eshaghi, j. z. haeggstrom, p. nordlund
Keywords: leukotriene biosynthesis, membrane, eicosanoid, transmembrane, membrane protein, apo, lyase, mapeg, human, ltc4s, enzyme, trimer
- 2uzr.pdb.
transferase 01-may-07 2uzr
Title: a transforming mutation in the pleckstrin homology domain of akt1 in cancer (akt1-ph_e17k)
Author: j. d. carpten, a. l. faber, c. horn, g. p. donoho, s. l. briggs, c. m. robbins, g. hostetter, s. boguslawski, t. y. moses, s. savage, m. uhlik, a. lin, j. du, y. w. qian, d. j. zeckner, g. tucker-kellogg, j. touchman, k. patel, s. mousses, m. bittner, r. schevitz, m. h. lai, k. l. blanchard, j. e. thomas
Keywords: phosphorylation, glucose metabolism, transferase
- 2uzs.pdb.
transferase 01-may-07 2uzs
Title: a transforming mutation in the pleckstrin homology domain of akt1 in cancer (akt1-ph_e17k)
Author: j. d. carpten, a. l. faber, c. horn, g. p. donoho, s. l. briggs, c. m. robbins, g. hostetter, s. boguslawski, t. y. moses, s. savage, m. uhlik, a. lin, j. du, y. w. qian, d. j. zeckner, g. tucker-kellogg, j. touchman, k. patel, s. mousses, m. bittner, r. schevitz, m. h. lai, k. l. blanchard, j. e. thomas
Keywords: phosphorylation, glucose metabolism, transferase
- 2v0p.pdb.
hydrolase inhibitor 15-may-07 2v0p
Zn Se
Title: the structure of tap42 alpha4 subunit
Author: s. m. roe, j. yang, d. barford
Keywords: signal transduction inhibitor, hydrolase inhibitor
- 2v0r.pdb.
transcription 16-may-07 2v0r
Title: crystal structure of a hairpin exchange variant (ltx) of the targeting line-1 retrotransposon endonuclease
Author: k. repanas, n. zingler, l. e. layer, g. g. schumann, a. perrakis, o. weichenrieder
Keywords: endonuclease, retrotransposition, retrotransposon, protein engineering, transcription
- 2v0s.pdb.
transcription 17-may-07 2v0s
Mn
Title: crystal structure of a hairpin exchange variant (lr1) of the targeting line-1 retrotransposon endonuclease
Author: k. repanas, n. zingler, l. e. layer, g. g. schumann, a. perrakis, o. weichenrieder
Keywords: endonuclease, retrotransposition, retrotransposon, protein engineering, hypothetical protein, transcription
- 2v1d.pdb.
oxidoreductase/repressor 23-may-07 2v1d
Title: structural basis of lsd1-corest selectivity in histone h3 recognition
Author: f. forneris, c. binda, a. adamo, e. battaglioli, a. mattevi
Keywords: host-virus interaction, nuclear protein, phosphorylation, chromatin regulator
- 2v24.pdb.
protein-binding 31-may-07 2v24
Ni
Title: structure of the human spry domain-containing socs box protein ssb-4
Author: j. uppenberg, a. bullock, t. keates, p. savitsky, a. c. w. pike, e. ugochukwu, g. bunkoczi, f. von delft, j. weigelt, c. h. arrowsmith, a. edwards, m. sundstrom, s. knapp
Keywords: spry domain, protein-binding
- 2yw6.pdb.
oxidoreductase 19-apr-07 2yw6
Title: structural studies of n terminal deletion mutant of dps from mycobacterium smegmatis
Author: s. roy, r. saraswathi, s. gupta, k. sekar, d. chatterji, m. vijayan
Keywords: quarternary assembly, ferroxidation
- 2yw7.pdb.
dna binding protein 19-apr-07 2yw7
Title: crystal structure of c-terminal deletion mutant of mycobacterium smegmatis dps
Author: s. roy, r. saraswathi, s. gupta, k. sekar, d. chatterji, m. vijayan
Keywords: quarternary assebmly
- 2z1c.pdb.
chaperone, metal binding protein 08-may-07 2z1c
Title: crystal structure of hypc from thermococcus kodakaraensis kod1
Author: s. watanabe, r. matsumi, t. arai, h. atomi, t. imanaka, k. miki
Keywords: ob-fold
- 2z1d.pdb.
metal binding protein 08-may-07 2z1d
Fe
Title: crystal structure of [nife] hydrogenase maturation protein, hypd from thermococcus kodakaraensis
Author: s. watanabe, r. matsumi, t. arai, h. atomi, t. imanaka, k. miki
Keywords: [4fe-4s] cluster, thiol redox
- 2z1e.pdb.
transferase 08-may-07 2z1e
Title: crystal structure of hype from thermococcus kodakaraensis (outward form)
Author: s. watanabe, r. matsumi, t. arai, h. atomi, t. imanaka, k. miki
Keywords: atpase
- 2z1f.pdb.
transferase 08-may-07 2z1f
Title: crystal structure of hype from thermococcus kodakaraensis (inward form)
Author: s. watanabe, r. matsumi, t. arai, h. atomi, t. imanaka, k. miki
Keywords: atpase
- 2z1z.pdb.
transferase 16-may-07 2z1z
Title: crystal structure of ll-diaminopimelate aminotransferase from arabidopsis thaliana complexed with l-malate ion
Author: n. watanabe, m. m. cherney, m. j. van belkum, s. l. marcus, m. d. flegel, m. d. clay, m. k. deyholos, j. c. vederas, m. n. g. james
Keywords: ll-dap-at, plp, arabidopsis thaliana, lysine biosynthesis, thdpa, ll-dap
- 2z20.pdb.
transferase 17-may-07 2z20
Se
Title: crystal structure of ll-diaminopimelate aminotransferase from arabidopsis thaliana
Author: n. watanabe, m. m. cherney, m. j. van belkum, s. l. marcus, m. d. flegel, m. d. clay, m. k. deyholos, j. c. vederas, m. n. g. james
Keywords: ll-dap-at, plp, arabidopsis thaliana, lysine biosynthesis, thdpa, ll-dap
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