Recent PDB releases or updates: week of 25 May 2007
- 1fns.pdb.
immune system 23-aug-00 1fns
Title: crystal structure of the von willebrand factor (vwf) a1 domain i546v mutant in complex with the function blocking fab nmc4
Author: k. i. varughese
Keywords: glycoprotein iba (a:alpha) binding, complex (willebrand/immunoglobulin), blood coagulation type 2b von willebrand disease
- 1r6u.pdb.
ligase 16-oct-03 1r6u
Se
Title: crystal structure of an active fragment of human tryptophanyl-trna synthetase with cytokine activity
Author: x. -l. yang, f. j. otero, r. j. skene, d. e. mcree, l. ribas de pouplana, p. schimmel
Keywords: rossmann fold catalytic domain, anticodon recognition domain, bound trp-amp
- 1xpv.pdb.
structural genomics, unknown function 09-oct-04 1xpv
(NMR, 20 structures)
Title: solution structure of northeast structural genomics target protein xcr50 from x. campestris
Author: y. shao, t. b. acton, g. liu, l. ma, y. shen, r. xiao, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
Keywords: gft nmr, structural genomics, nesgc, xcr50, protein structure initiative, psi, northeast structural genomics consortium
- 2azy.pdb.
hydrolase 12-sep-05 2azy
Ca
Title: crystal structure of porcine pancreatic phospholipase a2 in complex with cholate
Author: y. h. pan, b. j. bahnson, m. k. jain
Keywords: binding, cholate, carboxylic ester hydrolase, pla2, pancreatic enzyme
- 2azz.pdb.
hydrolase 12-sep-05 2azz
Cl Ca
Title: crystal structure of porcine pancreatic phospholipase a2 in complex with taurocholate
Author: y. h. pan, b. j. bahnson, m. k. jain
Keywords: binding, taurocholate, carboxylic ester hydrolase, pla2, panceartic enzyme
- 2b00.pdb.
hydrolase 12-sep-05 2b00
Ca
Title: crystal structure of porcine pancreatic phospholipase a2 in complex with glycocholate
Author: y. h. pan, b. j. bahnson, m. k. jain
Keywords: binding, glycocholate, carboxylic ester hydrolase, pla2, pancreatic enzyme
- 2b01.pdb.
hydrolase 12-sep-05 2b01
Cl Ca
Title: crystal structure of porcine pancreatic phospholipase a2 in complex with taurochenodeoxycholate
Author: y. h. pan, b. j. bahnson, m. k. jain
Keywords: binding, taurochenodeoxycholate, carboxylic ester hydrolase, pla2, pancreatic enzyme
- 2b03.pdb.
hydrolase 12-sep-05 2b03
Ca
Title: crystal structure of porcine pancreatic phospholipase a2 in complex with taurochenodeoxycholate
Author: y. h. pan, b. j. bahnson, m. k. jain
Keywords: binding, taurochenodeoxycholate, carboxy ester hydrolase, pancreatic enzyme
- 2b04.pdb.
hydrolase 12-sep-05 2b04
Cl Ca
Title: crystal structure of porcine pancreatic phospholipase a2 in complex with glycochenodeoxycholate
Author: y. h. pan, b. j. bahnson, m. k. jain
Keywords: binding, glycochenodeoxycholate, carboxylic ester hydrolase, pancreatic enzyme
- 2bsl.pdb.
oxidoreductase 11-may-05 2bsl
Mg
Title: crystal structure of l. lactis dihydroorotate dehydrogense a in complex with 3,4-dihydroxybenzoate
Author: a. e. wolfe, m. hansen, s. g. gattis, y. -c. hu, e. johansson, s. arent, s. larsen, b. a. palfey
Keywords: dihydroorotate dehydrogenase, fmn, flavoprotein, oxidoreductase, pyrimidine biosynthesis
- 2bx7.pdb.
oxidoreductase 31-may-05 2bx7
Mg
Title: crystal structure of l. lactis dihydroorotate dehydrogense a in complex with 3,5-dihydroxybenzoate
Author: a. e. wolfe, m. hansen, s. g. gattis, y. -c. hu, e. johansson, s. arent, s. larsen, b. a. palfey
Keywords: dihydroorotate dehydrogenase, oxidoreductase
- 2cm4.pdb.
inhibitor 04-may-06 2cm4
Title: the complement inhibitor omci in complex with ricinoleic acid
Author: p. roversi, s. johnson, o. lissina, g. c. paesen, w. boland, m. a. nunn, s. m. lea
Keywords: c5, tick, omci, lipocalin, inhibitor, complement
- 2cm9.pdb.
inhibitor 04-may-06 2cm9
Title: the complement inhibitor omci in complex with ricinoleic acid
Author: p. roversi, s. johnson, o. lissina, g. c. paesen, w. boland, m. a. nunn, s. m. lea
Keywords: c5, tick, omci, lipocalin, inhibitor, complement
- 2cmy.pdb.
hydrolase 16-may-06 2cmy
Ca
Title: crystal complex between bovine trypsin and veronica hederifolia trypsin inhibitor
Author: r. conners, j. l. yardley, a. konarev, p. shewry, r. l. brady
Keywords: serine protease inhibitor, calcium, zymogen, protease, digestion, hydrolase, metal-binding, serine protease
- 2cnj.pdb.
receptor 22-may-06 2cnj
(NMR, 20 structures)
Title: nmr studies on the interaction of insulin-growth factor ii ( igf-ii) with igf2r domain 11
Author: c. williams, s. prince, o. zaccheo, a. b. hassan, j. crosby, m. crump
Keywords: polymorphism, glycoprotein, transmembrane, nmr, igf2r, cancer, membrane, receptor, lysosome, insulin-like growth factor-ii
- 2cnk.pdb.
hydrolase 22-may-06 2cnk
Title: crystal structures of caspase-3 in complex with aza-peptide epoxide inhibitors.
Author: r. ganesan, s. jelakovic, a. j. campbell, z. z. li, j. l. asgian, j. c. powers, m. g. grutter
Keywords: zymogen
- 2cnl.pdb.
hydrolase 22-may-06 2cnl
Title: crystal structures of caspase-3 in complex with aza-peptide epoxide inhibitors.
Author: r. ganesan, s. jelakovic, a. j. campbell, z. z. li, j. l. asgian, j. c. powers, m. g. grutter
Keywords: zymogen
- 2cnm.pdb.
transferase 22-may-06 2cnm
Title: rimi - ribosomal s18 n-alpha-protein acetyltransferase in complex with a bisubstrate inhibitor (cterm-arg-arg-phe- tyr-arg-ala-n-alpha-acetyl-s-coa).
Author: m. w. vetting, m. yu, d. c. bareich, j. s. blanchard
Keywords: gcn5-n-acetyltransferase, ribosomal protein, acetyltransferase, gnat, transferase, acyltransferase
- 2cnn.pdb.
hydrolase 22-may-06 2cnn
Title: crystal structures of caspase-3 in complex with aza-peptide epoxide inhibitors.
Author: r. ganesan, s. jelakovic, a. j. campbell, z. z. li, j. l. asgian, j. c. powers, m. g. grutter
Keywords: zymogen
- 2cno.pdb.
hydrolase 22-may-06 2cno
Title: crystal structures of caspase-3 in complex with aza-peptide epoxide inhibitors.
Author: r. ganesan, s. jelakovic, a. j. campbell, z. z. li, j. l. asgian, j. c. powers, m. g. grutter
Keywords: zymogen
- 2de0.pdb.
transferase 07-feb-06 2de0
Title: crystal structure of human alpha 1,6-fucosyltransferase, fut8
Author: n. taniguchi, h. ihara, a. nakagawa
Keywords: fucosyltransferase, glycosyltransferase, n-glycan, core fucose, sh3 domain
- 2doa.pdb.
transcription 28-apr-06 2doa
(NMR, 20 structures)
Title: solution structure of the helical domain in human eleven- nineteen lysine-rich leukemia protein ell
Author: k. saito, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: c19orf17, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dos.pdb.
hydrolase 03-may-06 2dos
(NMR, 10 structures)
Title: structural basis for the recognition of lys48-linked polyubiquitin chain by the josephin domain of ataxin-3, a putative deubiquitinating enzyme
Author: a. sumiyoshi
- 2dp6.pdb.
hydrolase/dna 07-may-06 2dp6
Fe
Title: crystal structure of uracil-dna glycosylase in complex with ap:c containing dna
Author: h. kosaka, n. nakagawa, r. masui, s. kuramitsu, j. hoseki, riken structural genomics/proteomics initiative (rsgi)
Keywords: riken structural genomics/proteomics initiative, rsgi
- 2dpp.pdb.
lyase 12-may-06 2dpp
Co
Title: crystal structure of thermostable bacillus sp. rapc8 nitrile hydratase
Author: t. l. tsekoa, a. o. tastan-bishop, r. a. cameron, b. t. sewell, m. f. sayed, d. a. cowan
Keywords: cobalt, oxidised cys
- 2dpw.pdb.
structural genomics, unknown function 17-may-06 2dpw
Na Se
Title: hpothetical transferase structure from thermus thermophilus
Author: p. h. rehse, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2drt.pdb.
structural protein 14-jun-06 2drt
Title: structure analysis of (pog)4-log-(pog)5
Author: k. okuyama
Keywords: triple helix, leu
- 2drx.pdb.
structural protein 16-jun-06 2drx
Title: structure analysis of (pog)4-(log)2-(pog)4
Author: k. okuyama
Keywords: triple helix, leu
- 2dt4.pdb.
structural genomics, unknown function 10-jul-06 2dt4
Title: crystal structure of pyrococcus horikoshii a plant- and prokaryote-conserved (ppc) protein at 1.60 resolution
Author: l. lin, h. nakano, s. uchiyama, s. fujimoto, s. matsunaga, s. nakamura
- 2dxl.pdb.
hydrolase 28-aug-06 2dxl
Co
Title: glycerophosphodiesterase from enterobacter aerogenes
Author: c. j. jackson, p. d. carr, d. l. ollis
Keywords: beta-sheet extension, metalloenzyme, disulfide, alpha/beta sandwich
- 2dxn.pdb.
hydrolase 28-aug-06 2dxn
Zn
Title: glycerophosphodiesterase from enterobacter aerogenes
Author: c. j. jackson, p. d. carr, d. l. ollis
Keywords: beta-sheet extension, metalloenzyme, disulfide, alpha/beta sandwich
- 2dy5.pdb.
oxidoreductase 06-sep-06 2dy5
Cl Fe
Title: crystal structure of rat heme oxygenase-1 in complex with heme and 2-[2-(4-chlorophenyl)ethyl]-2-[(1h-imidazol-1-yl) methyl]-1,3-dioxolane
Author: m. sugishima, h. takahashi, k. fukuyama
Keywords: substrate bound structure
- 2dyd.pdb.
rna binding protein 10-sep-06 2dyd
(NMR, 15 structures)
Title: solution structure of the pabc domain from triticum aevestium poly(a)-binding protein
Author: n. siddiqui
- 2e25.pdb.
hydrolase 08-nov-06 2e25
F Zn
Title: the crystal structure of the t109s mutant of e. coli dihydroorotase complexed with an inhibitor 5-fluoroorotate
Author: m. lee, m. j. maher, j. m. guss
- 2e26.pdb.
signaling protein 08-nov-06 2e26
Zn Ca
Title: crystal structure of two repeat fragment of reelin
Author: n. yasui, t. nogi, t. kitao, j. takagi
- 2e2b.pdb.
transferase 10-nov-06 2e2b
F
Title: crystal structure of the c-abl kinase domain in complex with inno-406
Author: t. horio, t. hamasaki, t. wakayama, k. takagaki, t. ohgi
Keywords: kinase, inno-406
- 2eqb.pdb.
endocytosis/exocytosis 30-mar-07 2eqb
Title: crystal structure of the rab gtpase sec4p, the sec2p gef domain, and phosphate complex
Author: y. sato, s. fukai, r. ishitani, o. nureki
- 2gqw.pdb.
oxidoreductase 22-apr-06 2gqw
Title: crystal structure of ferredoxin reductase, bpha4 (oxidized form)
Author: t. senda, m. senda
- 2gr0.pdb.
oxidoreductase 22-apr-06 2gr0
Title: crystal structure of ferredoxin reductase, bpha4 (oxidized form, nad+ complex)
Author: t. senda, m. senda
- 2gr1.pdb.
oxidoreductase 22-apr-06 2gr1
Title: crystal structure of ferredoxin reductase, bpha4 (hydroquinone)
Author: t. senda, m. senda
- 2gr2.pdb.
oxidoreductase 22-apr-06 2gr2
Title: crystal structure of ferredoxin reductase, bpha4 (oxidized form)
Author: t. senda, m. senda
- 2gr3.pdb.
oxidoreductase 22-apr-06 2gr3
Title: crystal structure of ferredoxin reductase, bpha4 (oxidized form)
Author: t. senda, m. senda
- 2gsg.pdb.
immune system 26-apr-06 2gsg
Title: crystal structure of the fv fragment of a monoclonal antibody specific for poly-glutamine
Author: p. li, k. e. huey-tubman, a. p. west jr. , m. j. bennett, p. j. bjorkman
Keywords: monoclonal antibody, poly-glutamine
- 2gyx.pdb.
deoxyribonucleic acid 10-may-06 2gyx
Mg
Title: crystal structure of db884- d(cgcgaattcgcg)2 complex at 1.86 a resolution.
Author: m. p. h. lee, s. neidle
Keywords: double helix, dodecamer, compound db 884.
- 2h1e.pdb.
hydrolase 16-may-06 2h1e
Title: tandem chromodomains of budding yeast chd1
Author: j. f. flanagan iv, s. khorasanizadeh
Keywords: chromodomain, tandem chromodomains, three-stranded antiparallel b-sheet
- 2h1f.pdb.
transferase 16-may-06 2h1f
Title: e. coli heptosyltransferase waac with adp
Author: s. grizot, m. salem, v. vongsouthi, l. durand, f. moreau, h. dohi, s. vincent, s. escaich, a. ducruix
- 2h1h.pdb.
transferase 16-may-06 2h1h
F
Title: e. coli heptosyltransferase waac with adp-2-deoxy-2-fluoro heptose
Author: s. grizot, m. salem, v. vongsouthi, l. durand, f. moreau, h. dohi, s. vincent, s. escaich, a. ducruix
Keywords: absence of c-terminal alpha-helix
- 2h1y.pdb.
transferase 17-may-06 2h1y
Title: crystal structure of malonyl-coa:acyl carrier protein transacylase (mcat) from helicobacter pylori
Author: l. zhang, w. liu, x. shen, h. jiang
Keywords: mcat
- 2h1z.pdb.
toxin 17-may-06 2h1z
(NMR, 25 structures)
Title: structure of a dual-target spider toxin
Author: b. l. sollod, m. w. maciejewski, g. f. king
Keywords: cystine knot
- 2h2k.pdb.
metal binding protein 19-may-06 2h2k
Ca
Title: crystal structure analysis of human s100a13
Author: m. li, p. f. zhang, j. p. zhang, w. r. chang
- 2h3h.pdb.
sugar binding protein 22-may-06 2h3h
Title: crystal structure of the liganded form of thermotoga maritima glucose binding protein
Author: a. changela, y. tian
Keywords: periplasmic binding protein, gbp
- 2h8a.pdb.
transferase 07-jun-06 2h8a
(electron diffraction)
Title: structure of microsomal glutathione transferase 1 in complex with glutathione
Author: h. hebert
- 2h9t.pdb.
hydrolase 11-jun-06 2h9t
Title: crystal structure of human alpha-thrombin in complex with suramin
Author: l. m. t. r. lima, i. polikarpov, r. q. monteiro
Keywords: coagulation factor ii, suramin, inhibitor
- 2h9w.pdb.
luminescent protein 12-jun-06 2h9w
Title: green fluorescent protein ground states: the influence of a second protonation site near the chromophore
Author: g. garau
Keywords: chromophore, mutant, fluorescent, ph, biosensor, chloride, halide, halogen
- 2han.pdb.
transcription/dna 13-jun-06 2han
Zn
Title: structural basis of heterodimeric ecdysteroid receptor interaction with natural response element hsp27 gene promoter
Author: m. jakob, r. kolodziejczyk, m. orlowski, s. krzywda, a. kowalska, j. dutko-gwozdz, t. gwozdz, m. kochman, m. jaskolski, a. ozyhar
Keywords: transcription factor, dna-binding, nuclear protein, nuclear receptor, zinc finger
- 2hda.pdb.
transferase 20-jun-06 2hda
Title: yes sh3 domain
Author: a. camara-artigas, i. luque, j. ruiz-sanz, p. l. mateo, j. m. martin- garcia
- 2hih.pdb.
hydrolase 29-jun-06 2hih
Zn Ca
Title: crystal structure of staphylococcus hyicus lipase
Author: j. j. w. tiesinga, g. van pouderoyen, m. nardini, b. w. dijkstra
Keywords: a1 phospholipase, phospholipid binding
- 2hkk.pdb.
lyase 05-jul-06 2hkk
Hg Zn
Title: carbonic anhydrase activators: solution and x-ray crystallography for the interaction of andrenaline with various carbonic anhydrase isoforms
Author: c. temperini, a. innocenti, d. vullo, a. scozzafava, c. t. supuran
Keywords: activators, crystal structure
- 2hkl.pdb.
transferase 05-jul-06 2hkl
Title: crystal structure of enterococcus faecium l,d- transpeptidase c442s mutant
Author: v. delfosse, j. -e. hugonnet, s. magnet, j. -l. mainardi, m. arthur, c. mayer
Keywords: d-transpeptidase, antibiotic resistance
- 2hl4.pdb.
lyase 06-jul-06 2hl4
Hg Cl Zn
Title: crystal structure analysis of human carbonic anhydrase ii in complex with a benzenesulfonamide derivative
Author: a. di fiore, c. t. supuran, j. -y. winum, j. -l. montero, c. pedone, a. scozzafava, g. de simone
- 2htx.pdb.
hydrolase 26-jul-06 2htx
Cl Na
Title: crystal structure analysis of hen egg white lysozyme crosslinked by polymerized glutaraldehyde in acidic environment
Author: y. wine, n. cohen-hadar, a. freeman, s. lagziel-simis, f. frolow
- 2hu1.pdb.
hydrolase 26-jul-06 2hu1
Cl Na
Title: crystal structure analysis of hen egg white lyszoyme
Author: y. wine, n. cohen-hadar, a. freeman, s. lagziel-simis, f. frolow
- 2hx2.pdb.
oxidoreductase 02-aug-06 2hx2
Zn Fe As
Title: bovine enos heme domain complexed with (4s)-n-{4-amino-5- [(2-aminoethyl)-hydroxyamino]-pentyl}-n'-nitroguanidine
Author: j. igarashi, h. li, t. l. poulos
Keywords: heme enzyme, inhibitor
- 2hx3.pdb.
oxidoreductase 02-aug-06 2hx3
Zn Fe
Title: rat nnos heme domain complexed with (4s)-n-{4-amino-5-[(2- aminoethyl)-hydroxyamino]-pentyl}-n'-nitroguanidine
Author: j. igarashi, h. li, t. l. poulos
Keywords: heme enzyme, inhibitor
- 2hx4.pdb.
oxidoreductase 02-aug-06 2hx4
Zn Fe
Title: rat nnos heme domain complexed with 4-n-(nw-nitro-l- argininyl)-trans-4-hydroxyamino-l-proline amide
Author: j. igarashi, h. li, t. l. poulos
Keywords: heme enzyme, inhibitor
- 2hy9.pdb.
deoxyribonucleic acid 04-aug-06 2hy9
(NMR, 10 structures)
Title: solution structure of the human telomeric quadruplex
Author: j. dai, c. punchihewa, r. a. jones, l. hurley, d. yang
- 2i5l.pdb.
gene regulation 25-aug-06 2i5l
Title: crystal structure of bacillus subtilis cold shock protein variant bs-cspb m1r/e3k/k65i
Author: k. e. a. max, u. heinemann
Keywords: cold shock domain, beta-barrel, dna binding protein, expression regulator
- 2i5m.pdb.
gene regulation 25-aug-06 2i5m
Mg
Title: crystal structure of bacillus subtilis cold shock protein cspb variant a46k s48r
Author: k. e. a. max, u. heinemann
Keywords: cold shock domain, beta-barrel, dna binding protein, expression regulator
- 2i7b.pdb.
transferase 30-aug-06 2i7b
Hg
Title: structure of the naturally occuring mutant of human abo(h) blood group b glycosyltransferase: gtb/a268t
Author: j. a. letts, s. v. evans
Keywords: blood group, abo allele, polymorphism, hybrid allele
- 2ihj.pdb.
transferase 26-sep-06 2ihj
F
Title: crystal structure of multifunctional sialyltransferase from pasteurella multocida with cmp-3f-neu5ac bound
Author: a. j. fisher, l. ni
- 2ihk.pdb.
transferase 26-sep-06 2ihk
F
Title: crystal structure of multifunctional sialyltransferase from pasteurella multocida with cmp-3f(equatorial)-neu5ac bound
Author: a. j. fisher, l. ni
- 2ihm.pdb.
transferase/dna 26-sep-06 2ihm
Mg Na
Title: polymerase mu in ternary complex with gapped 11mer dna duplex and bound incoming nucleotide
Author: a. f. moon, l. c pedersen, t. a. kunkel
Keywords: helix-turn-helix
- 2iho.pdb.
sugar binding protein 27-sep-06 2iho
Title: crystal structure of moa, a lectin from the mushroom marasmius oreades in complex with the trisaccharide gal(1, 3)gal(1,4)glcnac
Author: e. grahn, g. askarieh, a. holmner, h. tateno, h. c. winter, i. j. goldstein, u. krengel
- 2ihz.pdb.
transferase 27-sep-06 2ihz
F
Title: crystal structure of multifunctional sialyltransferase from pasteurella multocida with cmp-3f-neu5ac and alpha-lactose bound
Author: a. j. fisher, l. ni
Keywords: alpha-lactose, two rossmann domain
- 2ilv.pdb.
transferase 03-oct-06 2ilv
Title: crystal structure of multifunctional sialyltransferase from pasteurella multocida with cmp and alpha-lactose bound
Author: a. j. fisher, l. ni
Keywords: cmp, alpha-lactose, two rossmann domains
- 2ipq.pdb.
structural genomics, unknown function 12-oct-06 2ipq
Se
Title: crystal structure of c-terminal domain of salmonella enterica protein sty4665, pfam duf1528
Author: u. a. ramagopal, j. b. bonanno, j. gilmore, r. toro, k. t. bain, c. reyes, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: unknown function, psi, protein structure initiative, new york structural genomix research consortium, nysgxrc
- 2iti.pdb.
isomerase 19-oct-06 2iti
Title: human pin1 bound to l-peptide
Author: y. zhang, j. p. noel
Keywords: isomerase, ww domain
- 2itk.pdb.
isomerase 19-oct-06 2itk
Title: human pin1 bound to d-peptide
Author: j. p. noel, y. zhang
Keywords: isomerase, ww domain
- 2j16.pdb.
hydrolase 09-aug-06 2j16
Mg
Title: apo & sulphate bound forms of sdp-1
Author: d. c. briggs, n. q. mcdonald
Keywords: protein phosphatase, hypothetical protein
- 2j17.pdb.
hydrolase 09-aug-06 2j17
Mg
Title: ptyr bound form of sdp-1
Author: d. c. briggs, n. q. mcdonald
Keywords: protein phosphatase, hypothetical protein
- 2jbo.pdb.
transferase 09-dec-06 2jbo
Title: protein kinase mk2 in complex with an inhibitor (crystal form-1, soaking)
Author: r. c. hillig, u. eberspaecher, f. monteclaro, m. huber, d. nguyen, a. mengel, b. muller-tiemann, u. egner
Keywords: mapkap kinase 2, phosphorylation, mk2, kinase, atp site, transferase, atp-binding, serine/threonine-protein kinase, small molecule inhibitor, nucleotide-binding, alternative splicing
- 2jbp.pdb.
transferase 09-dec-06 2jbp
Title: protein kinase mk2 in complex with an inhibitor (crystal form-2, co-crystallization)
Author: r. c. hillig, u. eberspaecher, f. monteclaro, m. huber, d. nguyen, a. mengel, b. muller-tiemann, u. egner
Keywords: mapkap kinase 2, phosphorylation, small molecule inhibitor, mk2, kinase, atp site, transferase, atp-binding, serine/threonine-protein kinase, co-crystallization, nucleotide-binding
- 2jcf.pdb.
transferase 22-dec-06 2jcf
F Mn
Title: crystal structure of alpha-1,3 galactosyltransferase (r365k) in complex with udp-2f-galactose
Author: h. jamaluddin, p. tumbale, s. g. withers, k. r. acharya, k. brew
Keywords: transmembrane, golgi apparatus, enzyme mechanism, glycoprotein, metal-binding, signal-anchor, alpha-1, membrane, manganese, transferase, glycosyltransferase, substrate specificity
- 2jcj.pdb.
transferase 25-dec-06 2jcj
Mn
Title: crystal structure of alpha-1,3 galactosyltransferase (c- terminus truncated mutant-c3) in complex with udp nd tris
Author: h. jamaluddin, p. tumbale, s. g. withers, k. r. acharya, k. brew
Keywords: membrane, manganese, transferase, glycosyltransferase, substrate specificity
- 2jck.pdb.
transferase 26-dec-06 2jck
Mn
Title: crystal structure of alpha-1,3 galactosyltransferase (r365k) in complex with udp and 2 manganese ion
Author: h. jamaluddin, p. tumbale, s. g. withers, k. r. acharya, k. brew
Keywords: membrane, manganese, transferase, glycosyltransferase, substrate specificity
- 2jcl.pdb.
transferase 26-dec-06 2jcl
Title: crystal structure of alpha-1,3 galactosyltransferase (r365k) in the absence of ligands
Author: h. jamaluddin, p. tumbale, s. g. withers, k. r. acharya, k. brew
Keywords: golgi apparatus, enzyme mechanism, glycoprotein, metal-binding, signal-anchor, alpha-1, membrane, manganese, transferase, glycosyltransferase, substrate specificity
- 2jcv.pdb.
oxidoreductase 04-jan-07 2jcv
Title: x-ray structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with fosmidomycin and nadph
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jcx.pdb.
oxidoreductase 04-jan-07 2jcx
Title: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with fosmidomycin and nadph
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jcy.pdb.
oxidoreductase 04-jan-07 2jcy
Title: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jcz.pdb.
oxidoreductase 04-jan-07 2jcz
Mn
Title: x-ray structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with fosmidomycin, manganese and nadph
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jd0.pdb.
oxidoreductase 04-jan-07 2jd0
Title: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with nadph
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jd1.pdb.
oxidoreductase 04-jan-07 2jd1
Mn
Title: x-ray structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with manganese and nadph
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jd2.pdb.
oxidoreductase 04-jan-07 2jd2
Mn
Title: x-ray structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with manganese
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jgz.pdb.
transferase 17-feb-07 2jgz
Title: crystal structure of phospho-cdk2 in complex with cyclin b
Author: n. r. brown, e. petri, e. d. lowe, v. skamnaki, l. n. johnson
Keywords: ubl conjugation, phosphorylation, serine/threonine-protein kinase, kinase, cyclin, mitosis, cell cycle, transferase, atp-binding, polymorphism, cell division, nucleotide-binding, substrate specificit...
- 2jh1.pdb.
cell adhesion 19-feb-07 2jh1
Cl
Title: crystal structure of toxoplasma gondii micronemal protein 1
Author: t. m. a. blumenschein, n. friedrich, r. a. childs, s. saouros, e. p. carpenter, m. a. campanero-rhodes, p. simpson, t. koutroukides, m. j. blackman, t. feizi, d. soldati-favre, s. matthews
Keywords: mic1, microneme, mar domain, cell invasion
- 2jh7.pdb.
cell adhesion 20-feb-07 2jh7
Cl Se
Title: crystal structure of toxoplasma gondii micronemal protein 1 bound to 6'-sialyl-n-acetyllactosamine
Author: t. m. a. blumenschein, n. friedrich, r. a. childs, s. saouros, e. p. carpenter, m. a. campanero-rhodes, p. simpson, t. koutroukides, m. j. blackman, t. feizi, d. soldati-favre, s. matthews
Keywords: mic1, microneme, mar domain, cell invasion
- 2jhd.pdb.
cell adhesion 21-feb-07 2jhd
Cl Se
Title: crystal structure of toxoplasma gondii micronemal protein 1 bound to 3'-sialyl-n-acetyllactosamine
Author: t. m. a. blumenschein, n. friedrich, r. a. childs, s. saouros, e. p. carpenter, m. a. campanero-rhodes, p. simpson, t. koutroukides, m. j. blackman, t. feizi, d. soldati-favre, s. matthews
Keywords: mic1, microneme, mar domain, cell invasion
- 2jn6.pdb.
structural genomics, unknown function 28-dec-06 2jn6
(NMR, 20 structures)
Title: solution nmr structure of protein cgl2762 from corynebacterium glutamicum: northeast structural genomics consortium target cgr3
Author: k. k. singarapu, d. sukumaran, d. parish, c. x. chen, k. cunningham, r. xiao, g. v. t. swapna, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
Keywords: psi-2, protein structure, structural genomics, protein structure initiative, northeast structural genomics consortium, nesg
- 2jod.pdb.
signaling protein 07-mar-07 2jod
(NMR, minimized average structure)
Title: pac1-rshort n-terminal ec domain pacap(6-38) complex
Author: e. t. olejniczak, c. sun, d. song, r. a. davis-taber, l. w. barrett, v. e. scott, p. l. richardson, a. pereda-lopez, m. e. uchic, l. r. solomon, m. r. lake, k. a. walter, p. j. hajduk
- 2jog.pdb.
hydrolase 10-mar-07 2jog
(NMR, 10 structures)
Title: structure of the calcineurin-nfat complex
Author: k. takeuchi, m. h. roehrl, z. y. sun, g. wagner
Keywords: nfat, nuclear magnetic resonance, complex structure, phosphatase
- 2np9.pdb.
oxidoreductase 26-oct-06 2np9
Title: crystal structure of a dioxygenase in the crotonase superfamily
Author: s. d. bruner, p. f. widboom, e. n. fielding
- 2nud.pdb.
toxin/protein binding 09-nov-06 2nud
F
Title: the structure of the type iii effector avrb complexed with a high-affinity rin4 peptide
Author: a. u. singer, d. desveaux, a. j. wu, b. mcnulty, j. sondek, j. l. dangl
- 2nun.pdb.
toxin/protein binding 09-nov-06 2nun
Title: the structure of the type iii effector avrb complexed with adp
Author: a. u. singer, d. desveaux, a. j. wu, b. mcnulty, j. l. dangl, j. sondek
Keywords: avrb, nuclotide, pocket, adp
- 2nup.pdb.
protein transport 09-nov-06 2nup
Zn
Title: crystal structure of the human sec23a/24a heterodimer, complexed with the snare protein sec22b
Author: j. d. mancias, j. goldberg
- 2nut.pdb.
protein transport 09-nov-06 2nut
Zn
Title: crystal structure of the human sec23a/24a heterodimer, complexed with the snare protein sec22b
Author: j. d. mancias, j. goldberg
- 2nwc.pdb.
chaperone 14-nov-06 2nwc
Title: a 3.02 angstrom crystal structure of wild-type apo groel in a monoclinic space group
Author: p. d. kiser, d. t. lodowski, k. palczewski
Keywords: hsp60
- 2nxa.pdb.
hydrolase 17-nov-06 2nxa
Zn
Title: structure of zn-dependent metallo-beta-lactamase from bacillus cereus r121h, c221d double mutant
Author: f. j. medrano, a. j. vila, j. m. gonzalez
Keywords: r121h-c221d double mutant
- 2nyp.pdb.
hydrolase 21-nov-06 2nyp
Zn
Title: structure of beta-lactamase ii from bacillus cereus. r121h, c221d doble mutant with two zinc ions.
Author: f. j. medrano, a. j. vila, j. m. gonzalez
Keywords: bacillus cereus
- 2o3m.pdb.
deoxyribonucleic acid 01-dec-06 2o3m
(NMR, 11 structures)
Title: monomeric g-dna tetraplex from human c-kit promoter
Author: a. t. phan, v. v. kuryavyi, s. burge, s. neidle, d. j. patel
Keywords: single-residue cha reversal,5-nucleotide snap-back loops;broken strand topolog
- 2o4f.pdb.
deoxyribonucleic acid 04-dec-06 2o4f
Li Na
Title: structure of a parallel-stranded guanine tetraplex crystallised with monovalent ions
Author: c. creze, b. rinaldi, r. haser, p. bouvet, p. gouet
Keywords: quadruple helix, parallel-stranded
- 2o6l.pdb.
transferase 07-dec-06 2o6l
Se
Title: crystal structure of the udp-glucuronic acid binding domain of the human drug metabolizing udp-glucuronosyltransferase 2b7
Author: m. j. miley, m. r. redinbo
Keywords: rossman, mad, enzyme, nucleotide binding, sugar,udp-glucuronosyltransferase, ugt
- 2ob1.pdb.
transferase 18-dec-06 2ob1
Title: ppm1 with 1,8-ans
Author: m. r. groves
Keywords: 8-ans
- 2ob2.pdb.
transferase 18-dec-06 2ob2
Title: ppm1 in the absence of 1,8-ans (cf 1jd)
Author: m. r. groves, i. b. mueller, x. kreplin, j. mueller-dieckmann
Keywords: 8-ans (as 1rjd)
- 2oc2.pdb.
hydrolase 20-dec-06 2oc2
Cl Zn
Title: structure of testis ace with rxpa380
Author: h. r. corradi
- 2oc4.pdb.
transferase 20-dec-06 2oc4
Title: crystal stucture of human purine nucleoside phosphorylase mutant h257d with imm-h
Author: a. rinaldo-matthis, s. c. almo, v. l. schramm
- 2oc9.pdb.
transferase 20-dec-06 2oc9
Title: crystal stucture of human purine nucleoside phosphorylase mutant h257g with imm-h
Author: a. rinaldo-matthis, s. c. almo, v. l. schramm
- 2odc.pdb.
membrane protein 22-dec-06 2odc
(NMR, minimized average structure)
Title: lem-domain of the nuclear envelope protein emerin
Author: g. m. clore, m. cai
Keywords: lem-domain multidimensional nmr dipolar couplings
- 2odg.pdb.
membrane protein, protein binding 22-dec-06 2odg
(NMR)
Title: complex of barrier-to-autointegration factor and lem-domain of emerin
Author: g. m. clore, m. cai
Keywords: lem-domain baf multidimensional nmr dipolar couplings
- 2ogf.pdb.
structural genomics, unknown function 05-jan-07 2ogf
Se
Title: crystal structure of protein mj0408 from methanococcus jannaschii, pfam duf372
Author: u. a. ramagopal, r. toro, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: unknown function, nysgxrc, psi-2, protein structure initiative, new york structural genomix research consortium
- 2ohh.pdb.
oxidoreductase 10-jan-07 2ohh
Fe
Title: crystal structure of coenzyme f420h2 oxidase (fpra), a diiron flavoprotein, active oxidized state
Author: h. seedorf, e. warkentin, u. ermler
Keywords: flavodoxine like domain
- 2ohi.pdb.
oxidoreductase 10-jan-07 2ohi
Cl Fe
Title: crystal structure of coenzyme f420h2 oxidase (fpra), a diiron flavoprotein, reduced state
Author: h. seedorf, e. warkentin, u. ermler
Keywords: flavodoxine like domain
- 2ohj.pdb.
oxidoreductase 10-jan-07 2ohj
Cl Fe
Title: crystal structure of coenzyme f420h2 oxidase (fpra), a diiron flavoprotein, inactive oxidized state
Author: h. seedorf, e. warkentin, u. ermler
Keywords: flavodoxine like domain
- 2oj7.pdb.
ribonucleic acid 12-jan-07 2oj7
(NMR, 10 structures)
Title: nmr structure of the uguu tetraloop of duck epsilon apical stem loop
Author: f. c. girard, o. m. ottink, k. a. m. ampt, m. tessari, s. s. wijmenga
Keywords: rna, epsilon, duck, nmr, uguu, tetraloop
- 2oj8.pdb.
ribonucleic acid 12-jan-07 2oj8
(NMR, 10 structures)
Title: nmr structure of the uguu tetraloop of duck epsilon apical stem loop of the hepatitis b virus
Author: f. c girard, o. m. ottink, k. a. m. ampt, m. tessari, s. s. wijmenga
Keywords: rna, epsilon, duck, nmr, uguu, tetraloop
- 2olc.pdb.
transferase 18-jan-07 2olc
Ho
Title: crystal structure of 5-methylthioribose kinase in complex with adp-2ho
Author: s. y. ku, g. d. smith, p. l. howell
- 2on6.pdb.
transferase 23-jan-07 2on6
Title: crystal stucture of human purine nucleoside phosphorylase mutant h257f with imm-h
Author: a. rinaldo-matthis, a. s. murkin, s. c. almo, v. l. schramm
- 2op3.pdb.
hydrolase 26-jan-07 2op3
F
Title: the structure of cathepsin s with a novel 2- arylphenoxyacetaldehyde inhibitor derived by the substrate activity screening (sas) method
Author: g. spraggon, h. inagaki, h. tsuruoka, m. hornsby, s. a. lesley, j. a. ellman
Keywords: nonpeptidic, substrate activity screening
- 2opp.pdb.
transferase 30-jan-07 2opp
Mg F
Title: crystal structure of hiv-1 reverse transcriptase in complex with gw420867x.
Author: j. ren, c. e. nichols, p. p. chamberlain, k. l. weaver, s. j. h. chan, j. kleim, d. k. stammers
Keywords: aids, nnrti, gw420867x, drug resistance
- 2opq.pdb.
transferase 30-jan-07 2opq
F
Title: crystal structure of l100i mutant hiv-1 reverse transcriptase in complex with gw420867x.
Author: j. ren, c. e. nichols, p. p. chamberlain, k. l. weaver, s. a. short, j. h. chan, j. kleim, d. k. stammers
Keywords: aids, nnrti, gw420867x, drug resistance
- 2opr.pdb.
transferase 30-jan-07 2opr
F
Title: crystal structure of k101e mutant hiv-1 reverse transcriptase in complex with gw420867x.
Author: j. ren, c. e. nichols, p. p. chamberlain, k. l. weaver, s. a. short, j. h. chan, j. kleim, d. k. stammers
Keywords: aids, nnrti, gw420867x, drug resistance
- 2ops.pdb.
transferase 30-jan-07 2ops
F
Title: crystal structure of y188c mutant hiv-1 reverse transcriptase in complex with gw420867x.
Author: j. ren, c. e. nichols, p. p. chamberlain, k. l. weaver, s. a. short, j. h. chan, j. kleim, d. k. stammers
Keywords: aids, nnrti, gw420867x, drug resistance
- 2oru.pdb.
de novo protein 04-feb-07 2oru
(NMR, 20 structures)
Title: solution structure of xtz1-peptide, a beta-hairpin peptide with a structured extension
Author: r. e. campbell
- 2orv.pdb.
transferase 04-feb-07 2orv
Zn
Title: human thymidine kinase 1 in complex with tp4a
Author: d. segura-pena, s. lutz, c. monnerjahn, m. konrad, a. lavie
Keywords: tp4a (p1-(5'-adenosyl)p4-(5'- (2'deoxythymidil))tetraphosphate
- 2orw.pdb.
transferase 04-feb-07 2orw
Mg Zn
Title: thermotoga maritima thymidine kinase 1 like enzyme in complex with tp4a
Author: d. segura-pena, s. lutz, c. monnerjahn, m. konrad, a. lavie
Keywords: tp4a
- 2ot3.pdb.
protein transport 07-feb-07 2ot3
Title: crystal structure of rabex-5 vps9 domain in complex with nucleotide free rab21
Author: a. delprato, d. lambright
Keywords: vps9 domain, rab21, vesicular traffic, protein transport
- 2ov4.pdb.
ligase 12-feb-07 2ov4
Cs
Title: crystal structure of b. stearothermophilus tryptophanyl trna synthetase in complex with adenosine tetraphosphate
Author: p. retailleau, c. w. carter jr.
Keywords: nucleotide binding site, rossmann fold, transition state analog inhibitor
- 2ova.pdb.
transport protein,ligand binding protein13-feb-07 2ova
Title: x-ray structure of human complement protein c8gamma y83w mutant
Author: b. chiswell, l. l. lovelace, c. brannen, e. a. ortlund, l. lebioda, j. m. sodetz
- 2ovd.pdb.
transport protein,ligand binding protein13-feb-07 2ovd
Title: crystal structure of human complement protein c8gamma with laurate
Author: b. chiswell, l. l. lovelace, c. brannen, e. a. ortlund, l. lebioda, j. m. sodetz
- 2ove.pdb.
transport protein,ligand binding protein13-feb-07 2ove
Title: crystal structure of recombinant human complement protein c8gamma
Author: b. chiswell, l. l. lovelace, c. brannen, e. a. ortlund, l. lebioda, j. m. sodetz
- 2ox5.pdb.
transport protein 19-feb-07 2ox5
Se
Title: the soxyz complex of paracoccus pantotrophus
Author: s. bruno, v. sauve, b. c. berks, a. m. hemmings
- 2oxg.pdb.
transport protein 20-feb-07 2oxg
Title: the soxyz complex of paracoccus pantotrophus
Author: v. sauve, b. c. berks, a. m. hemmings
- 2oxh.pdb.
transport protein 20-feb-07 2oxh
Title: the soxyz complex of paracoccus pantotrophus
Author: v. sauve, b. c. berks, a. m. hemmings
- 2oyv.pdb.
neuropeptide 23-feb-07 2oyv
(NMR, 14 structures)
Title: neurotensin in dpc micelles
Author: j. p. monti, j. coutant, p. a. curmi
- 2oyw.pdb.
neuropeptide 23-feb-07 2oyw
(NMR, 15 structures)
Title: neurotensin in tfe:h2o (80:20)
Author: j. p. monti, j. coutant, p. a. curmi
- 2ozl.pdb.
oxidoreductase 26-feb-07 2ozl
Mg K
Title: human pyruvate dehydrogenase s264e variant
Author: e. m. ciszak, p. m. dominiak, m. s. patel, l. g. korotchkina
- 2ozo.pdb.
transferase 26-feb-07 2ozo
Mg
Title: autoinhibited intact human zap-70
Author: s. deindl, t. a. kadlecek, t. brdicka, x. cao, a. weiss, j. kuriyan
Keywords: tandem sh2, autoinhibition, itam, hydrogen bonding network, tcr signaling
- 2p19.pdb.
transcription 02-mar-07 2p19
Title: crystal structure of bacterial regulatory protein of gntr family from corynebacterium glutamicum
Author: r. zhang, m. zhou, m. gu, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: gntr family, mcsg, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics
- 2p2c.pdb.
hydrolase 07-mar-07 2p2c
Title: inhibition of caspase-2 by a designed ankyrin repeat protein (darpin)
Author: h roschitzki voser, c. briand, g. capitani, m. g. gruetter
Keywords: caspase, caspase-2, inhibition, protein design, protein libraries, designed ankyrin repeat proteins, ribosome display
- 2p4b.pdb.
signaling protein 12-mar-07 2p4b
Title: crystal structure of e.coli rseb
Author: d. y. kim, k. k. kim
- 2p4p.pdb.
structural genomics, unknown function 12-mar-07 2p4p
Mg Ca Se
Title: crystal structure of a corc_hlyc domain from haemophilus ducreyi
Author: m. e. cuff, l. volkart, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: corc_hlyc, pfam: pf03471, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2p7d.pdb.
ribonucleic acid 20-mar-07 2p7d
Co Na
Title: a minimal, 'hinged' hairpin ribozyme construct solved with mimics of the product strands at 2.25 angstroms resolution
Author: a. t. torelli, j. krucinska, j. e. wedekind
- 2p7e.pdb.
ribonucleic acid 20-mar-07 2p7e
Co V
Title: vanadate at the active site of a small ribozyme suggests a role for water in transition-state stabilization
Author: a. t. torelli, j. krucinska, j. e. wedekind
- 2p7f.pdb.
ribonucleic acid 20-mar-07 2p7f
Co
Title: the novel use of a 2',5'-phosphodiester linkage as a reaction intermediate at the active site of a small ribozyme
Author: a. t. torelli, j. krucinska, j. e. wedekind
Keywords: 5' phosphodiester; vanadate; reaction intermediate; transition-state stabilization; active site waters; induced fit
- 2p87.pdb.
splicing 21-mar-07 2p87
Title: crystal structure of protein tba
Author: l. zhang, j. shen, m. t. guarnieri, a. heroux, k. yang, r. zhao
- 2p8r.pdb.
translation 22-mar-07 2p8r
Title: crystal structure of protein tba
Author: l. zhang, j. shen, m. t. guarnieri, a. heroux, k. yang, r. zhao
- 2p8s.pdb.
hydrolase 23-mar-07 2p8s
F Na
Title: human dipeptidyl peptidase iv/cd26 in complex with a cyclohexalamine inhibitor
Author: g. scapin, t. biftu
Keywords: beta-propeller, dimer, structure-based design
- 2p92.pdb.
unknown function 23-mar-07 2p92
Se
Title: crystal structure of a hypothetical protein from streptococcus aureus
Author: t. e. mcgrath, g. kisselman, v. romanov, j. wu-brown, m. soloveychik, t. s. y. chan, r. d. gordon, d. thambipillai, a. dharamsi, k. mansoury, k. battaile, a. m. edwards, e. f. pai, n. y. chirgadze
- 2pft.pdb.
endocytosis/exocytosis 05-apr-07 2pft
Title: the crystal structure of mouse exo70 reveals unique features of the mammalian exocyst
Author: b. a. moore, z. xu
- 2pfv.pdb.
endocytosis/exocytosis 05-apr-07 2pfv
Title: s. cerevisiae exo70 with additional residues to 2.1 angrstrom resolution
Author: b. a. moore, h. h. robinson, z. xu
- 2pgg.pdb.
transferase 09-apr-07 2pgg
Title: crystal structure of a birnavirus (ibdv) rna-dependent rna polymerase vp1
Author: j. pan, v. n. vakharia, y. j. tao
Keywords: rdrp, birnavirus, ibdv, permutation, dsrna virus
- 2pju.pdb.
transcription 16-apr-07 2pju
Title: crystal structure of propionate catabolism operon regulatory protein prpr
Author: u. a. ramagopal, r. toro, m. gilmore, b. wu, j. koss, c. groshong, t. gheyi, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: prpr, transcriptional regulation, psi- 2, protein structure initiative, new york structural genomix research consortium, nysgxrc
- 2pk8.pdb.
structural genomics, unknown function 17-apr-07 2pk8
Au
Title: crystal structure of an uncharacterized protein pf0899 from pyrococcus furiosus
Author: z. j. liu, w. tempel, l. chen, a. shah, d. lee, l. l. clancy-kelley, b. d. dillard, j. p. rose, f. j. sugar, f. e. jenny jr. , h. s. lee, m. izumi, c. shah, f. l. poole iii, m. w. w. adams, j. s. richardson, d. c. richardson, b-c. wang, southeast collaboratory for structural genomics (secsg)
Keywords: structural genomics, pyrococcus furiosus, uncharacterized protein, psi, protein structure initiative, southeast collaboratory for structural genomics, secsg
- 2pkx.pdb.
transcriptional regulator 18-apr-07 2pkx
Se
Title: e.coli response regulator phop receiver domain
Author: p. bachhawat
Keywords: response regulator, transcription factor, phop, virulence, phob family
- 2pl1.pdb.
transcriptional regulator 18-apr-07 2pl1
Mg F Pt Be Se
Title: berrylium fluoride activated receiver domain of e.coli phop
Author: p. bachhawat
Keywords: response regulator, beryllium fluoride, transcription factor, phop, activated, virulence, phob family
- 2pli.pdb.
structural genomics, unknown function 19-apr-07 2pli
Zn Se
Title: crystal structure of putative mg2+ and co2+ transporter(corc)associated region from neisseria meningitidis mc58
Author: b. nocek, e. duggan, m. gu, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: mcsg, psi2, structural genomics, protein structure initiative, midwest center for structural genomics
- 2pls.pdb.
structural genomics, unknown function 20-apr-07 2pls
Mg Se
Title: structural genomics, the crystal structure of the corc/hlyc transporter associated domain of a cbs domain protein from chlorobium tepidum tls
Author: k. tan, l. volkart, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: corc/hlyc transporter associated domain, cbs domain protein, chlorobium tepidum tls, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2plu.pdb.
isomerase 20-apr-07 2plu
Title: crystal structure of cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_4120
Author: a. k. wernimont, j. lew, t. hills, i. kozieradzki, y. h. lin, a. hassanali, y. zhao, m. schapira, c. h. arrowsmith, a. m. edwards, j. weigelt, m. sundstrom, a. bochkarev, r. hui, j. d. artz, t. xiao, structural genomics consortium (sgc)
Keywords: malaria, cryptosporidium, structural genomics, structural genomics consortium, sgc
- 2pma.pdb.
structural genomics, unknown function 20-apr-07 2pma
Title: structural genomics, the crystal structure of a protein lpg0085 with unknown function (duf785) from legionella pneumophila subsp. pneumophila str. philadelphia 1.
Author: k. tan, r. mulligan, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: protein lpg0085, duf785, legionella pneumophila subsp. pneumophila str. philadelphia 1, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2pme.pdb.
ligase 21-apr-07 2pme
Title: the apo crystal structure of the glycyl-trna synthetase
Author: w. xie
- 2pmf.pdb.
ligase 21-apr-07 2pmf
Cl
Title: the crystal structure of a human glycyl-trna synthetase mutant
Author: w. xie
- 2pmw.pdb.
hydrolase 23-apr-07 2pmw
Title: the crystal structure of proprotein convertase subtilisin kexin type 9 (pcsk9)
Author: d. e. piper, w. g. romanow, s. t. thibault, n. p. c. walker
Keywords: subtilisin, protease
- 2pmx.pdb.
structural genomics, unknown function 23-apr-07 2pmx
Mg
Title: human k-ras in complex with a gtp analogue
Author: y. tong, w. tempel, l. shen, c. h. arrowsmith, a. m. edwards, m. sundstrom, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: small gtpase, mutations, gtp analogue, structural genomics consortium, sgc
- 2pn0.pdb.
transcription 23-apr-07 2pn0
Se
Title: prokaryotic transcription elongation factor grea/greb from nitrosomonas europaea
Author: j. osipiuk, e. evdokimova, o. kagan, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: grea/greb, structural genomics, apc6349, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2pn8.pdb.
oxidoreductase 24-apr-07 2pn8
Title: crystal structure of human peroxiredoxin 4 (thioredoxin peroxidase)
Author: e. s. pilka, k. l. kavanagh, c. cooper, f. von delft, m. sundstrom, c. a. arrowsmith, j. weigelt, a. edwards, u. oppermann, structural genomics consortium (sgc)
Keywords: thioredoxin, oxidoreductase, structural genomics consortium, sgc
- 2ppg.pdb.
isomerase 30-apr-07 2ppg
Se
Title: crystal structure of putative isomerase from sinorhizobium meliloti
Author: u. a. ramagopal, r. toro, m. dickey, c. logan, c. groshong, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: isomerase, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
- 2pph.pdb.
transferase 30-apr-07 2pph
(NMR, 20 structures)
Title: solution structure of human mekk3 pb1 domain
Author: q. hu, j. zhang, j. wu, y. shi
- 2pq5.pdb.
hydrolase 01-may-07 2pq5
Title: crystal structure of dual specificity protein phosphatase 13 (dusp13)
Author: e. ugochukwu, e. salah, p. savitsky, a. barr, n. pantic, f. niesen, n. burgess-brown, g. berridge, g. bunkoczi, j. uppenberg, a. c. w. pike, m. sundstrom, c. h. arrowsmith, j. weigelt, a. edwards, a. von delft, s. knapp, structural genomics consortium (sgc)
Keywords: hydrolase, dual specificity phosphatase, dusp13, testis and skeletal muscle specific dsp, structural genomics, structural genomics consortium, sgc
- 2prv.pdb.
structural genomics, unknown function 04-may-07 2prv
Se
Title: crystal structure of uncharacterized protein (np_389780.1) from bacillus subtilis at 1.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: uncharacterized protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2ps2.pdb.
structural genomics, unknown function 04-may-07 2ps2
Mg
Title: crystal structure of putative mandelate racemase/muconate lactonizing enzyme from aspergillus oryzae
Author: a. a. fedorov, r. toro, e. v. fedorov, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: nysgxrc, target 9440a, enolase superfamily, psi-2, protein structure initiative, new york structural genomix research consortium
- 2pse.pdb.
oxidoreductase 06-may-07 2pse
Title: crystal structures of the luciferase and green fluorescent protein from renilla reniformis
Author: a. m. loening, t. d. fenn, s. s. gambhir
Keywords: luciferase
- 2psf.pdb.
oxidoreductase 06-may-07 2psf
Title: crystal structures of the luciferase and green fluorescent protein from renilla reniformis
Author: a. m. loening, t. d. fenn, s. s. gambhir
Keywords: luciferase
- 2pso.pdb.
structural genomics, unknown function 07-may-07 2pso
Title: human stard13 (dlc2) lipid transfer and protein localization domain
Author: l. lehtio, r. busam, c. h. arrowsmith, h. berglund, r. collins, l. g. dahlgren, a. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg-schiavone, i. johansson, a. kallas, t. karlberg, t. kotenyova, m. moche, p. nordlund, t. nyman, d. ogg, j. sagemark, p. stenmark, m. sundstrom, a. g. thorsell, s. van den berg, j. weigelt, m. welin, c. persson, structural genomics consortium (sgc)
Keywords: lipid binding, helix swapping, structural genomics, structural genomics consortium, sgc
- 2pst.pdb.
unknown function 07-may-07 2pst
Title: 1.8a crystal structure of the pa2412 protein from pseudomonas aeruginosa
Author: a. m. gulick, e. j. drake, m. b. shah
Keywords: non-ribosomal peptide synthesis clusters, mbth-like family, cog3251
- 2pt3.pdb.
oxidoreductase 08-may-07 2pt3
Fe Ca
Title: crystal structure of bovine lactoperoxidase at 2.34 a resolution reveals multiple anion binding sites
Author: a. k. singh, n. singh, s. sharma, p. kaur, c. betzel, t. p. singh
Keywords: anion binding sites
- 2pu5.pdb.
hydrolase 08-may-07 2pu5
Title: crystal structure of a c-c bond hydrolase, bphd, from burkholderia xenovorans lb400
Author: s. bhowmik, j. t. bolin
- 2pu6.pdb.
hydrolase 08-may-07 2pu6
Na
Title: crystal structure of s112a mutant of a c-c hydrolase, bphd from burkholderia xenovorans lb400
Author: s. bhowmik, j. t. bolin
- 2pu7.pdb.
hydrolase 08-may-07 2pu7
Na
Title: crystal structure of s112a/h265a double mutant of a c-c hydrolase, bphd, from burkholderia xenovorans lb400
Author: s. bhowmik, j. t. bolin
- 2pu8.pdb.
transferase 09-may-07 2pu8
Title: structures of 5-methylthioribose kinase reveal substrate specificity and unusual mode of nucleotide binding
Author: s. -y. ku
Keywords: methionine recycling pathway
- 2puh.pdb.
hydrolase 09-may-07 2puh
Na
Title: crystal structure of the s112a mutant of a c-c hydrolase, bphd from burkholderia xenovorans lb400, in complex with its substrate hopda
Author: s. bhowmik, j. t. bolin
- 2pui.pdb.
transferase 09-may-07 2pui
Mg
Title: structures of 5-methylthioribose kinase reveal substrate specificity and unusual mode of nucleotide binding
Author: s. -y. ku
Keywords: methionine recycling pathway
- 2puj.pdb.
hydrolase 09-may-07 2puj
Na
Title: crystal structure of the s112a/h265a double mutant of a c-c hydrolase, bphd from burkholderia xenovorans lb400, in complex with its substrate hopda
Author: s. bhowmik, j. t. bolin
- 2pul.pdb.
transferase 09-may-07 2pul
Mg
Title: structures of 5-methylthioribose kinase reveal substrate specificity and unusual mode of nucleotide binding
Author: s. -y. ku
Keywords: methionine recycling pathway
- 2pum.pdb.
oxidoreductase 09-may-07 2pum
I Fe Ca
Title: crystal structure of bovine lactoperoxidase complex with catechol and iodide at 2.7 a resolution
Author: a. k. singh, n. singh, s. sharma, p. kaur, t. p. singh
Keywords: anion binding
- 2pun.pdb.
transferase 09-may-07 2pun
Mg
Title: structures of 5-methylthioribose kinase reveal substrate specificity and unusual mode of nucleotide binding
Author: s. -y. ku
Keywords: methionine recycling pathway
- 2pup.pdb.
transferase 09-may-07 2pup
Mg
Title: structures of 5-methylthioribose kinase reveal substrate specificity and unusual mode of nucleotide binding
Author: s. -y. ku
Keywords: methionine recycling pathway, phosphate
- 2puq.pdb.
blood clotting 09-may-07 2puq
Ca
Title: crystal structure of active site inhibited coagulation factor viia in complex with soluble tissue factor
Author: j. r. bjelke, h. b. rasmussen
- 2puz.pdb.
hydrolase 09-may-07 2puz
Cl Mg Fe
Title: crystal structure of imidazolonepropionase from agrobacterium tumefaciens with bound product n-formimino-l- glutamate
Author: r. tyagi, s. eswaramoorthy, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
Keywords: 9252b, psi-2, imidazolonepropionase, n-formimino-l- glutamate, product-bound, structural genomics, protein structure initiative, new york structural genomix research consortium
- 2pv4.pdb.
structural genomics, unknown function 09-may-07 2pv4
Se
Title: crystal structure of uncharacterized protein (yp_928494.1) from shewanella amazonensis sb2b at 1.95 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: uncharacterized protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2pv7.pdb.
isomerase, oxidoreductase 09-may-07 2pv7
Se
Title: crystal structure of chorismate mutase / prephenate dehydrogenase (tyra) (1574749) from haemophilus influenzae rd at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: chorismate mutase type ii, chorismate mutase / prephenate dehydrogenase (tyra), structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2pvt.pdb.
hydrolase 10-may-07 2pvt
Title: crystal structure of a new isoform of phospholipase a2 from russells viper at 2.1 a resolution
Author: s. kumar, n. singh, s. sharma, p. kaur, t. p. singh
Keywords: active site, isoform
- 2pvv.pdb.
hydrolase 10-may-07 2pvv
Cl Zn Ca
Title: structure of human glutamate carboxypeptidase ii (gcpii) in complex with l-serine-o-sulfate
Author: c. barinka, j. lubkowski
- 2pvw.pdb.
hydrolase 10-may-07 2pvw
Cl Zn Ca
Title: a high resolution structure of human glutamate carboxypeptidase ii (gcpii) in complex with 2- (phosphonomethyl)pentanedioic acid (2-pmpa)
Author: c. barinka, j. lubkowski
- 2pw1.pdb.
immune system 10-may-07 2pw1
Title: crystal structure of the hiv-1 cross neutralizing monoclonal antibody 2f5 in complex with gp41 peptide eldkwnsl
Author: j. -p. julien, s. bryson, e. f. pai
Keywords: 2f5, gp41, neutralizing antibody
- 2pw2.pdb.
immune system 10-may-07 2pw2
Title: crystal structure of the hiv-1 cross neutralizing monoclonal antibody 2f5 in complex with gp41 peptide eldkwksl
Author: j. -p. julien, s. bryson, e. f. pai
Keywords: gp41, 2f5, neutralizing antibody
- 2pw4.pdb.
structural genomics, unknown function 10-may-07 2pw4
Zn Na Ni Se
Title: crystal structure of protein of unknown function duf1470 (yp_510353.1) from jannaschia sp. ccs1 at 1.45 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: protein of unknown function duf1470, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2pw9.pdb.
structural genomics, unknown function 10-may-07 2pw9
Title: crystal structure of a putative formate dehydrogenase accessory protein from desulfotalea psychrophila
Author: j. b. bonanno, m. dickey, k. t. bain, c. logan, r. romero, d. smith, s. wasserman, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: unknown function, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
- 2pwb.pdb.
hydrolase 11-may-07 2pwb
Ca
Title: crystal structure of the complex of proteinase k with coumarin at 1.9 a resolution
Author: a. k. singh, n. singh, m. sinha, s. sharma, p. kaur, t. p. singh
Keywords: complex
- 2pwp.pdb.
transferase 11-may-07 2pwp
Title: crystal structure of spermidine synthase from plasmodium falciparum in complex with spermidine
Author: w. qiu, a. dong, h. ren, h. wu, y. zhao, m. schapira, g. wasney, m. vedadi, j. lew, i. kozieradzki, a. m. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, a. n. plotnikov, a. bochkarev, r. hui, structural genomics consortium (sgc)
Keywords: spermidine synthase, spermidine, structural genomics consortium, sgc
- 2pwq.pdb.
ligase 11-may-07 2pwq
Title: crystal structure of a putative ubiquitin conjugating enzyme from plasmodium yoelii
Author: w. qiu, a. dong, a. hassanali, l. lin, s. brokx, s. altamentova, t. hills, j. lew, m. ravichandran, i. kozieradzki, y. zhao, m. schapira, a. m. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, a. bochkarev, r. hui, structural genomics consortium (sgc)
Keywords: plasmodium yoelii, structural genomics consortium, sgc
- 2pws.pdb.
hydrolase 13-may-07 2pws
Title: crystal structure of the complex formed between phospholipase a2 and 2-(4-isobutyl-phenyl)-propionic acid at 2.2 a resolution
Author: s. kumar, n. singh, s. sharma, p. kaur, t. p. singh
Keywords: active site, inhibitor
- 2pww.pdb.
structural genomics, unknown function 14-may-07 2pww
Se
Title: crystal structure of abc2387 from bacillus clausii
Author: u. a. ramagopal, j. freeman, c. lau, r. toro, k. bain, l. rodgers, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: unknown function, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
- 2pxx.pdb.
transferase 14-may-07 2pxx
U
Title: human putative methyltransferase mgc2408
Author: w. tempel, h. wu, l. dombrovski, h. zeng, h. zhu, p. loppnau, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: sgc, methyltransferase, mgc2408, loc84291
- 2py4.pdb.
hydrolase 15-may-07 2py4
Mg
Title: full length structure of the mycobacterium tuberculosis dutpase complexed with magnesium and alpha,beta-imido-dutp.
Author: o. barabas, n. nagy, e. takacs, g. b. vertessy
Keywords: enzyme-ligand complex
- 2uuc.pdb.
ribosome 01-mar-07 2uuc
Mg K Zn
Title: structure of the thermus thermophilus 30s ribosomal subunit complexed with a valine-asl with cmo5u in position 34 bound to an mrna with a gua-codon in the a-site and paromomycin.
Author: a. weixlbaumer, f. v. murphy, a. dziergowska, a. malkiewicz, f. a. p. vendeix, p. f. agris, v. ramakrishnan
Keywords: zinc, mrna, cmo5u, ribosome, decoding, zinc-finger, rna-binding, translation, coiled coil, paromomycin, rrna-binding, trna-binding, metal-binding, modifications, ribosomal protein, ribonucleoprotein
- 2uvg.pdb.
sugar-binding protein 10-mar-07 2uvg
Title: structure of a periplasmic oligogalacturonide binding protein from yersinia enterocolitica
Author: d. w. abbott, a. b. boraston
Keywords: periplasmic binding protein, togb, oligalacturonide, pectin degradation, sugar-binding protein
- 2uvh.pdb.
sugar-binding protein 10-mar-07 2uvh
Title: structure of a periplasmic oligogalacturonide binding protein from yersinia enterocolitica in complex with saturated digalacturonic acid
Author: d. w. abbott, a. b. boraston
Keywords: periplasmic binding protein, togb, pectin degradation, digalacturonic acid, sugar-binding protein
- 2uvi.pdb.
sugar-binding protein 10-mar-07 2uvi
Title: structure of a periplasmic oligogalacturonide binding protein from yersinia enterocolitica in complex with 4,5- unsaturated digalacturonic acid
Author: d. w. abbott, a. b. boraston
Keywords: 4, togb, pectin degradation, yersinia enterocolitica, 5-unsaturated digalacturonic acid, sugar-binding protein
- 2uvj.pdb.
sugar-binding protein 10-mar-07 2uvj
Title: structure of a periplasmic oligogalacturonide binding protein from yersinia enterocolitica in complex with trigalacturonic acid
Author: d. w. abbott, a. b. boraston
Keywords: periplasmic binding protein, togb, pectin degradation, trigalacturonic acid, sugar-binding protein
- 2uvx.pdb.
transferase/inhibitor complex 15-mar-07 2uvx
Title: structure of pka-pkb chimera complexed with 7-azaindole
Author: t. g. davies, a. donald, t. mchardy, m. g. rowlands, l. j. hunter, r. g. boyle, g. w. aherne, m. d. garrett, i. collins
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, transferase/inhibitor complex, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylatio...
- 2uvy.pdb.
transferase/inhibitor complex 15-mar-07 2uvy
Title: structure of pka-pkb chimera complexed with methyl-(4-(9h- purin-6-yl)-benzyl)-amine
Author: t. g. davies, a. donald, t. mchardy, m. g. rowlands, l. j. hunter, r. g. boyle, g. w. aherne, m. d. garrett, i. collins
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uvz.pdb.
transferase/inhibitor complex 15-mar-07 2uvz
Title: structure of pka-pkb chimera complexed with c-phenyl-c-(4-( 9h-purin-6-yl)-phenyl)-methylamine
Author: t. g. davies, a. donald, t. mchardy, m. g. rowlands, l. j. hunter, r. g. boyle, g. w. aherne, m. d. garrett, i. collins
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw0.pdb.
transferase/inhibitor complex 15-mar-07 2uw0
Cl
Title: structure of pka-pkb chimera complexed with 6-(4-(4-(4- chloro-phenyl)-piperidin-4-yl)-phenyl)-9h-purine
Author: t. g. davies, a. donald, t. mchardy, m. g. rowlands, l. j. hunter, r. g. boyle, g. w. aherne, m. d. garrett, i. collins
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw3.pdb.
transferase/inhibitor complex 19-mar-07 2uw3
Title: structure of pka-pkb chimera complexed with 5-methyl-4- phenyl-1h-pyrazole
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw4.pdb.
transferase 19-mar-07 2uw4
Title: structure of pka-pkb chimera complexed with 2-(4-(5-methyl- 1h-pyrazol-4-yl)-phenyl)-ethylamine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation
- 2uw5.pdb.
transferase/inhibitor complex 19-mar-07 2uw5
Cl
Title: structure of pka-pkb chimera complexed with (r)-2-(4- chloro-phenyl)-2-(4-1h-pyrazol-4-yl)-phenyl)-ethylamine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw6.pdb.
transferase/inhibitor complex 19-mar-07 2uw6
Cl
Title: structure of pka-pkb chimera complexed with (s)-2-(4- chloro-phenyl)-2-(4-1h-pyrazol-4-yl)-phenyl)-ethylamine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw7.pdb.
transferase/inhibitor complex 19-mar-07 2uw7
Cl
Title: structure of pka-pkb chimera complexed with 4-(4-chloro- phenyl)-4-(4-(1h-pyrazol-4-yl)-phenyl)-piperidine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw8.pdb.
transferase/inhibitor complex 19-mar-07 2uw8
Cl
Title: structure of pka-pkb chimera complexed with 2-(4-chloro- phenyl)-2-phenyl-ethylamine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw9.pdb.
transferase/inhibitor complex 19-mar-07 2uw9
Cl
Title: structure of pkb-beta (akt2) complexed with 4-(4-chloro- phenyl)-4-(4-(1h-pyrazol-4-yl)-phenyl)-piperidine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: serine/threonine-protein kinase, kinase, transferase, atp-binding, phosphorylation, nucleotide-binding, alternative splicing, transferase/inhibitor complex
- 2uwj.pdb.
chaperone 22-mar-07 2uwj
Ni
Title: structure of the heterotrimeric complex which regulates type iii secretion needle formation
Author: m. quinaud, s. ple, v. job, c. contreras-martel, j. p. simorre, i. attree, a. dessen
Keywords: chaperones, coiled coil, needle formation, type iii secretion, bacterial pathogenicity, chaperone
- 2ux8.pdb.
transferase 27-mar-06 2ux8
Title: crystal structure of sphingomonas elodea atcc 31461 glucose- 1-phosphate uridylyltransferase in complex with glucose- 1-phosphate.
Author: d. aragao, a. m. fialho, a. r. marques, c. frazao, i. sa-correia, e. p. mitchell
Keywords: transferase, galu pyrophosphorylase, glucose-1-phosphate uridylyltransferase, nucleotidyltransferase
- 2uxe.pdb.
viral protein 28-mar-07 2uxe
Se
Title: the structure of vaccinia virus n1
Author: s. cooray, m. w. bahar, n. g. a. abrescia, c. e. mcvey, n. w. bartlett, r. a. -j. chen, d. i. stuart, j. m. grimes, g. l. smith
Keywords: hypothetical protein,viral protein apoptosis, vaccinia virus, virulence factor
- 2uxh.pdb.
transcription 28-mar-07 2uxh
Title: ttgr in complex with quercetin
Author: y. alguel, c. meng, w. teran, t. krell, j. l. ramos, m. -t. gallegos, x. zhang
Keywords: multidrug binding protein, transcriptional regulator of efflux pumps, repressor, dna-binding, tetr familiy, transcription
- 2uxi.pdb.
transcription 28-mar-07 2uxi
Title: phloretin in complex with ttgr
Author: y. alguel, c. meng, w. teran, t. krell, j. l. ramos, m. -t. gallegos, x. zhang
Keywords: multidrug binding protein, repressor, dna-binding, tetr family, transcription, transcriptional regulator of efflux pumps
- 2uxo.pdb.
transcription 28-mar-07 2uxo
Title: ttgr in complex with tetracycline
Author: y. alguel, c. meng, w. teran, t. krell, j. l. ramos, m. -t gallegos, x. zhang
Keywords: transcription regulation, multidrug binding protein, transcriptional regulator of efflux pumps, repressor, tetr family, dna-binding, transcription
- 2uxp.pdb.
transcription 29-mar-07 2uxp
Cl
Title: ttgr in complex chloramphenicol
Author: y. alguel, c. meng, w. teran, t. krell, j. l. ramos, m. -t. gallegos, x. zhang
Keywords: transcription regulation, multidrug binding protein, transcriptional regulator of efflux pumps, repressor, tetr family, dna-binding, transcription
- 2uxu.pdb.
transcription 29-mar-07 2uxu
Title: ttgr in complex with naringenin
Author: y. alguel, c. meng, w. teran, t. krell, j. l. ramos, m. -t. gallegos, x. zhang
Keywords: transcription regulation, multidrug binding protein, transcriptional regulator of efflux pumps, repressor, tetr family, dna-binding, transcription
- 2uyi.pdb.
cell cycle 07-apr-07 2uyi
Mg
Title: crystal structure of ksp in complex with adp and thiophene containing inhibitor 33
Author: t. t. lee
Keywords: eg5, complex, mitosis, thiophene, inhibitor, nucleotide-binding, kinesin spindle protein, motor protein, cell division, phosphorylation, cell cycle, microtubule, coiled coil, atp-binding
- 2uym.pdb.
cell cycle 10-apr-07 2uym
Mg
Title: crystal structure of ksp in complex with adp and thiophene containing inhibitor 37
Author: t. t. lee
Keywords: ksp, eg5, complex, inhibitor, thiophene, atp-binding, cell cycle, cell division, coiled coil, microtubule, mitosis, motor protein, nucleotide-binding, phosphorylation
- 2v0e.pdb.
hydrolase 14-may-07 2v0e
(NMR, 20 structures)
Title: brk domain from human chd7
Author: m. d. allen, t. l. religa, s. m. v. freund, m. bycroft
Keywords: chromatin regulator, charge syndrome, phosphorylation, disease mutation, transcription regulation, chd7, helicase, hydrolase, brk domain, atp-binding, dna-binding, transcription, nuclear protein
- 2v0f.pdb.
hydrolase 14-may-07 2v0f
(NMR, 20 structures)
Title: brk domain from human chd7
Author: m. d. allen, t. l. religa, s. m. v. freund, m. bycroft
Keywords: chromatin regulator, charge syndrome, phosphorylation, disease mutation, transcription regulation, chd7, helicase, hydrolase, brk domain, atp-binding, dna-binding, transcription, nuclear protein
- 2yqc.pdb.
transferase 30-mar-07 2yqc
Mg
Title: crystal structure of uridine-diphospho-n-acetylglucosamine pyrophosphorylase from candida albicans, in the apo-like form
Author: k. miki, d. maruyama, y. nishitani, t. nonaka, a. kita
Keywords: crystal structure, n-acetylglucosamine, uridine-diphospho-n-acetylglucosamine, n-acetylglucosamine- 1-phosphate, candida albicans
- 2yqh.pdb.
transferase 30-mar-07 2yqh
Mg
Title: crystal structure of uridine-diphospho-n-acetylglucosamine pyrophosphorylase from candida albicans, in the substrate- binding form
Author: k. miki, d. maruyama, y. nishitani, t. nonaka, a. kita
Keywords: crystal structure, n-acetylglucosamine, uridine-diphospho-n-acetylglucosamine, n-acetylglucosamine- 1-phosphate, candida albicans
- 2yqj.pdb.
transferase 30-mar-07 2yqj
Mg
Title: crystal structure of uridine-diphospho-n-acetylglucosamine pyrophosphorylase from candida albicans, in the reaction- completed form
Author: k. miki, d. maruyama, y. nishitani, t. nonaka, a. kita
Keywords: crystal structure, n-acetylglucosamine, uridine-diphospho-n-acetylglucosamine, candida albicans
- 2yqs.pdb.
transferase 30-mar-07 2yqs
Mg
Title: crystal structure of uridine-diphospho-n-acetylglucosamine pyrophosphorylase from candida albicans, in the product- binding form
Author: k. miki, d. maruyama, y. nishitani, t. nonaka, a. kita
Keywords: crystal structure, n-acetylglucosamine, uridine-diphospho-n-acetylglucosamine, candida albicans
- 2yxj.pdb.
apoptosis 26-apr-07 2yxj
Cl
Title: crystal structure of bcl-xl in complex with abt-737
Author: p. e. czabotar, e. f. lee, b. j. smith, k. deshayes, k. zobel, w. d. fairlie, p. m. colman
Keywords: cancer therapeutic
- 2z0d.pdb.
hydrolase/structural protein 07-may-07 2z0d
Title: the crystal structure of human atg4b- lc3(1-120) complex
Author: k. satoo, n. noda, f. inagaki
Keywords: ubiquitin fold
- 2z0e.pdb.
hydrolase/structural protein 07-may-07 2z0e
Title: the crystal structure of human atg4b- lc3(1-124) complex
Author: k. satoo, n. noda, f. inagaki
Keywords: ubiquitin fold
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www.sdsc.edu/CCMS