Recent PDB releases or updates: week of 11 May 2007
- 1t8q.pdb.
hydrolase 13-may-04 1t8q
Mg Se
Title: structural genomics, crystal structure of glycerophosphoryl diester phosphodiesterase from e. coli
Author: r. zhang, y. kim, i. dementieva, n. duke, l. stols, m. donnelly, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg
- 2a9j.pdb.
isomerase 11-jul-05 2a9j
Title: human bisphosphoglycerate mutase complexed with 3- phosphoglycerate (17 days)
Author: y. wang, w. gong
Keywords: 3-phosphoglycerate
- 2b9c.pdb.
contractile protein 11-oct-05 2b9c
Title: structure of tropomyosin's mid-region: bending and binding sites for actin
Author: j. h. brown, z. zhou, l. reshetnikova, h. robinson, r. d. yammani, l. s. tobacman, c. cohen
Keywords: coiled coil, alanine, axial stagger, radius, side-chain packing, crystal packing, temperature factor, cardiomyopathy, elongated protein
- 2c29.pdb.
oxidoreductase 26-sep-05 2c29
Title: structure of dihydroflavonol reductase from vitis vinifera at 1.8 a.
Author: p. petit, t. granier, b. l. d'estaintot, s. hamdi, b. gallois
Keywords: short dehydrogenase reductase, nadph, dihydroquercetin, rossmann fold, oxidoreductase
- 2c2t.pdb.
oxidoreductase 29-sep-05 2c2t
B
Title: human dihydrofolate reductase complexed with nadph and 2,4- diamino-5-((7,8-dicarbaundecaboran-7-yl)methyl)-6- methylpyrimidine, a novel boron containing, nonclassical antifolate
Author: a. k. w. leung, r. c. reynolds, j. m. riordan, d. w. borhani
Keywords: lipophilic antifolates, nadp, one-carbon metabolism, oxidoreductase, reductase
- 2cfg.pdb.
oxidoreductase 20-feb-06 2cfg
Cu Ru Na
Title: agao in complex with wc4d3 (ru-wire inhibitor, 4-carbon linker, delta enantiomer, data set 3)
Author: d. b. langley, a. p. duff, h. c. freeman, j. m. guss, g. a. juda, d. m. dooley, s. m. contakes, n. w. halpern-manners, a. r. dunn, h. b. gray
Keywords: arthrobacter globiformis, copper, copper containing, oxidoreductase, tpq, quinone, ruthenium diimine wires, competitive inhibition, metal-binding
- 2cka.pdb.
hydrolase 14-apr-06 2cka
(NMR, 20 structures)
Title: solution structures of the brk domains of the human chromo helicase domain 7 and 8, reveals structural similarity with gyf domain suggesting a role in protein interaction
Author: e. ab, r. n. de jong, t. diercks, j. xiaoyun, m. daniels, r. kaptein, g. e. folkers
Keywords: transcription elongation, chromatin remodeling, protein-protein interaction, transcription, hydrolase, helicase, nuclear protein, chromatin regulator
- 2ckc.pdb.
hydrolase 14-apr-06 2ckc
(NMR, 25 structures)
Title: solution structures of the brk domains of the human chromo helicase domain 7 and 8, reveals structural similarity with gyf domain suggesting a role in protein interaction
Author: e. ab, r. n. de jong, t. diercks, j. xiaoyun, m. daniels, r. kaptein, g. e. folkers
Keywords: dna-binding, transcription, nuclear protein
- 2cmg.pdb.
transferase 08-may-06 2cmg
Title: crystal structure of spermidine synthase from helicobacter pylori
Author: y. -j. sun, p. -k. lu
Keywords: spermidine synthase, spermidine biosynthesis, polyamine biosynthesis, spee, transferase
- 2cmh.pdb.
transferase 08-may-06 2cmh
Title: crystal structure of spermidine synthase from helicobacter pylori
Author: y. -j. sun, p. -k. lu
Keywords: spermidine biosynthesis, spee, transferase, spermidine synthase, helicobacter pylori, polyamine biosynthesis
- 2d1g.pdb.
hydrolase 20-aug-05 2d1g
U V
Title: structure of francisella tularensis acid phosphatase a (acpa) bound to orthovanadate
Author: r. l. felts, t. j. reilly, j. j. tanner
Keywords: acid phosphatase, acpa, decavanadate, vanadate
- 2do6.pdb.
ligase 27-apr-06 2do6
(NMR, 20 structures)
Title: solution structure of rsgi ruh-065, a uba domain from human cdna
Author: t. hamada, h. hirota, y. -j. lin, p. guntert, m. sato, s. koshiba, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: uba domain, dimer, protein binding, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dqx.pdb.
hydrolase 01-jun-06 2dqx
Title: mutant beta-amylase (w55r) from soy bean
Author: k. ishikawa
- 2dvj.pdb.
signaling protein 31-jul-06 2dvj
(NMR)
Title: phosphorylated crk-ii
Author: y. kobashigawa, f. inagaki
Keywords: sh2, signal transduction, adapter molecule
- 2dvy.pdb.
hydrolase 01-aug-06 2dvy
Title: crystal structure of restriction endonucleases pabi
Author: k. miyazono, m. watanabe, m. kamo, t. sawasaki, k. nagata, y. endo, m. tanokura, i. kobayashi
- 2efz.pdb.
toxin 26-feb-07 2efz
(NMR, 20 structures)
Title: solution structure of an m-1 conotoxin with a novel disulfide linkage
Author: w. h. fang, w. h. du, y. h. han, f. j. huang
- 2egk.pdb.
protein binding 01-mar-07 2egk
Se
Title: crystal structure of tamalin pdz-intrinsic ligand fusion protein
Author: t. sugi, t. oyama, t. muto, s. nakanishi, k. morikawa, h. jingami
Keywords: ligand fusion
- 2ggv.pdb.
hydrolase 24-mar-06 2ggv
Title: crystal structure of the west nile virus ns2b-ns3 protease, his51ala mutant
Author: a. e. aleshin, s. a. shiryaev, a. y. strongin, r. c. liddington
Keywords: serine protease, viral protease, flavivirus
- 2grc.pdb.
hydrolase 24-apr-06 2grc
Title: 1.5 a structure of bromodomain from human brg1 protein, a central atpase of swi/snf remodeling complex
Author: m. singh, g. m. popowicz, m. krajewski, t. a. holak
Keywords: brg1, chromatin remodelling, acely-lysine binding, protein-protein interactions
- 2gru.pdb.
lyase 25-apr-06 2gru
Co
Title: crystal structure of 2-deoxy-scyllo-inosose synthase complexed with carbaglucose-6-phosphate, nad+ and co2+
Author: e. nango, t. kumasaka
Keywords: 2-deoxystreptamine, dehydroquinate synthase
- 2grw.pdb.
ribonucleic acid 25-apr-06 2grw
(NMR, 12 structures)
Title: solution structure of the poliovirus 3'-utr y-stem
Author: h. a. heus, j. zoll, m. tessari, f. j. m. van kuppeveld, w. j. g. melchers
Keywords: poliovirus, stem-loop, pseudo-2-fold symmetry
- 2gv0.pdb.
hydrolase 02-may-06 2gv0
Title: the structure of the orthorhombic form of soft-shelled turtle lysozyme at 1.9 angstroms resolution
Author: j. siritapetawee, s. thammasirirak, j. yuvaniyama, r. c. robinson
Keywords: hydrolase
- 2gv4.pdb.
ribonucleic acid 02-may-06 2gv4
(NMR, 13 structures)
Title: solution structure of the poliovirus 3'-utr y-stem
Author: h. a. heus, j. zoll, m. tessari, f. j. m. van kuppeveld, w. j. g. melchers
Keywords: poliovirus, stem-loop, pseudo-2-fold symmetry
- 2gvo.pdb.
ribonucleic acid 03-may-06 2gvo
(NMR, 21 structures)
Title: solution structure of a purine rich hexaloop hairpin belonging to pgy/mdr1 mrna and targeted by antisense oligonucleotides
Author: f. joli, n. bouchemal, a. laigle, b. hartmann, e. hantz
Keywords: hairpin structure, g.u wobble pair, hexaloop, 13c/15n-labeled rna
- 2gw3.pdb.
luminescent protein 03-may-06 2gw3
Ni
Title: crystal structure of stony coral fluorescent protein kaede, green form
Author: i. hayashi, h. mizuno, a. miyawaki, m. ikura
- 2gw4.pdb.
luminescent protein 03-may-06 2gw4
Ni
Title: crystal structure of stony coral fluorescent protein kaede, red form
Author: i. hayashi, h. mizuno, a. miyawako, m. ikura
- 2gx0.pdb.
luminescent protein 08-may-06 2gx0
Title: crystal structural and functional analysis of gfp-like fluorescent protein
Author: k. y. hwang, k. -h. nam, s. -y. park, k. sugiyama
Keywords: b-can, photoswitching
- 2gx2.pdb.
luminescent protein 08-may-06 2gx2
Mg
Title: crystal structural and functional analysis of gfp-like fluorescent protein dronpa
Author: k. y. hwang, k. -h. nam, s. -y. park, k. sugiyama
Keywords: fluorescence protein
- 2gx4.pdb.
hydrolase 08-may-06 2gx4
Title: crystal structure of sars coronavirus 3cl protease inhibitor complex
Author: m. f. hsu, a. h. -j. wang
Keywords: 3cl protease, inhibitor complex
- 2h3n.pdb.
immune system 22-may-06 2h3n
Title: crystal structure of the pre-b cell receptor
Author: a. j. bankovich, k. c. garcia
Keywords: v- and c-type immunoglobulin fold
- 2hdf.pdb.
protein transport 20-jun-06 2hdf
Sr Se
Title: crystal structure of the colicin i receptor cir from e.coli
Author: s. k. buchanan, l. esser, p. lukacik
Keywords: iron transport, tonb box, signal transduction, colicin i receptor, membrane protein
- 2hdi.pdb.
protein transport,antimicrobial protein 20-jun-06 2hdi
Title: crystal structure of the colicin i receptor cir from e.coli in complex with receptor binding domain of colicin ia.
Author: s. k. buchanan, l. esser, p. lukacik
Keywords: iron transport, tonb box, signal transduction, colicin i receptor, receptor ligand, membrane protein
- 2hfw.pdb.
lyase 26-jun-06 2hfw
Zn
Title: structural and kinetic analysis of proton shuttle residues in the active site of human carbonic anhydrase iii
Author: i. elder, s. z. fisher, p. j. laipis, c. k. tu, r. mckenna, d. n. silverman
Keywords: hca iii, proton transfer, lyase
- 2hfx.pdb.
lyase 26-jun-06 2hfx
Zn
Title: structural and kinetic analysis of proton shuttle residues in the active site of human carbonic anhydrase iii
Author: i. elder, s. z. fisher, p. j. laipis, c. k. tu, r. mckenna, d. n. silverman
Keywords: hca iii, proton transfer, lyase
- 2hfy.pdb.
lyase 26-jun-06 2hfy
Zn
Title: structural and kinetic analysis of proton shuttle residues in the active site of human carbonic anhydrase iii
Author: i. elder, s. z. fisher, p. j. laipis, c. k. tu, r. mckenna, d. n. silverman
Keywords: hca iii, proton transfer, lyase
- 2hg2.pdb.
oxidoreductase 26-jun-06 2hg2
Title: structure of lactaldehyde dehydrogenase
Author: l. di costanzo, g. a. gomez, d. w. christianson
Keywords: nad dependent
- 2hh2.pdb.
rna binding protein 27-jun-06 2hh2
(NMR, 20 structures)
Title: solution structure of the fourth kh domain of ksrp
Author: m. f. garcia-mayoral
- 2hh3.pdb.
rna binding protein 27-jun-06 2hh3
(NMR, 20 structures)
Title: solution structure of the third kh domain of ksrp
Author: m. f. garcia-mayoral
- 2hhn.pdb.
hydrolase 28-jun-06 2hhn
F
Title: cathepsin s in complex with non covalent arylaminoethyl amide.
Author: g. spraggon, m. hornsby, s. a. lesley, d. c. tully, j. l. harris, d. s. karenewsky, r. kulathila, k. clark
Keywords: noncovalent, inhibition, arylaminoethyl amide, protease
- 2hos.pdb.
transcription/dna 16-jul-06 2hos
Title: phage-selected homeodomain bound to unmodified dna
Author: k. m. shokat, m. e. feldman, m. d. simon
Keywords: phage display
- 2hot.pdb.
transcription/dna 16-jul-06 2hot
Title: phage selected homeodomain bound to modified dna
Author: m. e. feldman, m. d. simon, k. m. shokat
Keywords: phage display
- 2hqn.pdb.
signaling protein 19-jul-06 2hqn
(NMR, 20 structures)
Title: structure of a atypical orphan response regulator protein revealed a new phosphorylation-independent regulatory mechanism
Author: e. hong, w. lee
- 2hqo.pdb.
signaling protein 19-jul-06 2hqo
(NMR, 20 structures)
Title: structure of a atypical orphan response regulator protein revealed a new phosphorylation-independent regulatory mechanism
Author: e. hong, w. lee
Keywords: regulatory domain, symmetric dimer
- 2hqr.pdb.
signaling protein 19-jul-06 2hqr
(NMR, 20 structures)
Title: structure of a atypical orphan response regulator protein revealed a new phosphorylation-independent regulatory mechanism
Author: e. hong, w. lee
Keywords: h. pylori, symmetric dimer
- 2hri.pdb.
deoxyribonucleic acid 20-jul-06 2hri
K
Title: a parallel stranded human telomeric quadruplex in complex with the porphyrin tmpyp4
Author: g. n. parkinson, r. ghosh, s. neidle
Keywords: dna, propeller, dimeric, human telomere parallel stranded, ligand, complex
- 2ifs.pdb.
signaling protein 21-sep-06 2ifs
(NMR, 20 structures)
Title: structure of the n-wasp evh1 domain in complex with an extended wip peptide
Author: b. f. volkman, f. c. peterson, q. deng
Keywords: verprolin, polyproline, protein- protein complex, nmr
- 2ig9.pdb.
oxidoreductase 22-sep-06 2ig9
Cl Fe Ca
Title: structure of a full-length homoprotocatechuate 2,3- dioxygenase from b. fuscum in a new spacegroup.
Author: e. g. kovaleva, j. d. lipscomb
Keywords: extradiol, fe(ii), homoprotocatechuate
- 2iga.pdb.
oxidoreductase 22-sep-06 2iga
Cl Fe Ca
Title: structure of homoprotocatechuate 2,3-dioxygenase from b. fuscum in complex with reactive intermediates formed via in crystallo reaction with 4-nitrocatechol at low oxygen concentrations.
Author: e. g. kovaleva, j. d. lipscomb
Keywords: extradiol, fe(ii), homoprotocatechuate, alkylperoxo intermediate, substrate-semiquinone, open-ring product
- 2ij5.pdb.
oxidoreductase 29-sep-06 2ij5
Fe
Title: crystal structure of cytochrome p450 cyp121, p212121 space group
Author: a. roujeinikova, d. leys
Keywords: cyp121, cytochrome p450, azole ligation, fluconazole
- 2ij7.pdb.
oxidoreductase 29-sep-06 2ij7
F Fe
Title: structure of mycobacterium tuberculosis cyp121 in complex with the antifungal drug fluconazole
Author: a. roujeinikova, d. leys
Keywords: cytochrome p450, p450 cyp121, fluconazole, azole drug
- 2ilu.pdb.
oxidoreductase 03-oct-06 2ilu
Title: crystal structure of lactaldehyde dehydrogenase from e. coli: the binary complex with nadph
Author: l. di costanzo, g. gomez, d. w. christianson
- 2j49.pdb.
transcription 28-aug-06 2j49
Title: crystal structure of yeast taf5 n-terminal domain
Author: c. romier, n. james, c. birck, j. cavarelli, c. vivares, m. a. collart, d. moras
Keywords: nuclear protein, transcription regulation, taf5, tfiid, wd repeat, initiation, coiled coil
- 2j4b.pdb.
transcription 28-aug-06 2j4b
Title: crystal structure of encephalitozoon cuniculi taf5 n- terminal domain
Author: c. romier, n. james, c. birck, j. cavarelli, c. vivares, m. a. collart, d. moras
Keywords: tfiid, wd repeat, initiation, transcription, initiation factor
- 2j6e.pdb.
immune system 28-sep-06 2j6e
Zn Cd As
Title: crystal structure of an autoimmune complex between a human igm rheumatoid factor and igg1 fc reveals a novel fc epitope and evidence for affinity maturation
Author: s. duquerroy, e. a. stura, s. bressanelli, h. browne, d. beale, m. hamon, p. casali, m. -c. vaney, f. a. rey, b. j. sutton, m. j. taussig
Keywords: immunoglobulin c region, membrane, glycoprotein, transmembrane, hypothetical protein, immune system, immunoglobulin domain
- 2jab.pdb.
de novo protein 27-nov-06 2jab
Title: a designed ankyrin repeat protein evolved to picomolar affinity to her2
Author: c. zahnd, e. wyler, j. m. schwenk, d. steiner, m. c. lawrence, n. m. mckern, f. pecorari, c. w. ward, t. o. joos, a. pluckthun
Keywords: darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein
- 2jcn.pdb.
apoptosis 27-dec-06 2jcn
Title: the crystal structure of bak1 - a mitochondrial apoptosis regulator
Author: m. moche, p. stenmark, c. arrowsmith, h. berglund, r. busam, r. collins, a. edwards, u. b. ericsson, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg schiavone, i. johansson, t. karlberg, u. kosinska, t. kotenyova, s. lundgren, m. e. nilsson, t. nyman, d. ogg, c. persson, j. sagemark, m. sundstrom, j. uppenberg, m. upsten, a. g. thorsell, s. van den berg, j. weigelt, p. nordlund, structural genomics consortium (sgc)
Keywords: oligomerization, cytochrome c release, membrane, apoptosis, polymorphism, transmembrane
- 2jcv.pdb.
oxidoreductase 04-jan-07 2jcv
Title: x-ray structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with fosmidomycin and nadph
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jcx.pdb.
oxidoreductase 04-jan-07 2jcx
Title: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with fosmidomycin and nadph
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jcy.pdb.
oxidoreductase 04-jan-07 2jcy
Title: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jcz.pdb.
oxidoreductase 04-jan-07 2jcz
Mn
Title: x-ray structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with fosmidomycin, manganese and nadph
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jd0.pdb.
oxidoreductase 04-jan-07 2jd0
Title: x-ray structure of mutant 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with nadph
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jd1.pdb.
oxidoreductase 04-jan-07 2jd1
Mn
Title: x-ray structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with manganese and nadph
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jd2.pdb.
oxidoreductase 04-jan-07 2jd2
Mn
Title: x-ray structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis, in complex with manganese
Author: l. m. henriksson, t. unge, t. a. jones, s. l. mowbray
Keywords: isoprene biosynthesis, 1-deoxy-d-xylulose 5-phosphate reductoisomerase, nadp, rv2870c, metal-binding, oxidoreductase
- 2jef.pdb.
transferase 17-jan-07 2jef
Ca
Title: the molecular basis of selectivity of nucleotide triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus dna polymerase iv: steady-state and pre-steady-state and x-ray crystallography of correct and incorrect pairing
Author: r. l. eoff, k. c. angel, i. d. kosekov, m. egli, f. p. guengerich
Keywords: dna-binding, metal-binding
- 2jeg.pdb.
transferase 17-jan-07 2jeg
Ca
Title: the molecular basis of selectivity of nucleoside triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus dna polymerase iv: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing
Author: r. l. eoff, k. c. angel, i. d. kosekov, m. egli, f. p. guengerich
Keywords: dna-binding, metal-binding
- 2jei.pdb.
transferase 17-jan-07 2jei
Ca
Title: the molecular basis of selectivity of nucleoside triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus dna polymerase iv: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing
Author: r. l. eoff, k. c. angel, i. d. kosekov, m. egli, f. p. guengerich
Keywords: dna-binding, metal-binding
- 2jej.pdb.
transferase 17-jan-07 2jej
Ca
Title: the molecular basis of selectivity of nucleoside triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus dna polymerase iv: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing
Author: r. l. eoff, k. c. angel, i. d. kosekov, m. egli, f. p. guengerich
Keywords: dna-binding, metal-binding
- 2jeo.pdb.
transferase 18-jan-07 2jeo
Title: crystal structure of human uridine-cytidine kinase 1
Author: u. kosinska, p. stenmark, c. arrowsmith, h. berglund, r. busam, r. collins, a. edwards, u. b. ericsson, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg schiavone, m. hogbom, i. johansson, t. karlberg, t. kotenyova, m. moche, m. e. p. nilsson, t. nyman, d. ogg, c. persson, j. sagemark, m. sundstrom, j. uppenberg, m. uppsten, a. g. thorsell, s. van den berg, j. weigelt, m. welin, p. nordlund, structural genomics consortium (sgc)
Keywords: kinase, transferase, atp-binding, nucleoside kinase, nucleotide-binding
- 2jg1.pdb.
transferase 13-feb-07 2jg1
Mg Se
Title: structure of staphylococcus aureus d-tagatose-6-phosphate kinase with cofactor and substrate
Author: l. miallau, w. n. hunter, s. m. mcsweeney, g. a. leonard
Keywords: phosphoryl transfer, conformational changes, kinase, transferase, lactose metabolism
- 2jgv.pdb.
transferase 16-feb-07 2jgv
Se
Title: structure of staphylococcus aureus d-tagatose-6-phosphate kinase in complex with adp
Author: l. miallau, w. n. hunter, s. m. mcsweeney, g. a. leonard
Keywords: phosphoryl transfer, conformational changes, kinase, transferase, lactose metabolism
- 2jgy.pdb.
transferase 16-feb-07 2jgy
Title: the crystal structure of human orotidine-5'-decarboxylase domain of human uridine monophosphate synthetase (umps)
Author: m. moche, d. ogg, c. arrowsmith, h. berglund, r. busam, r. collins, l. g. dahlgren, a. edwards, u. b. ericsson, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg-schiavone, i. johansson, t. karlberg, u. kosinska, t. kotenyova, l. lehtio, m. e. nilsson, t. nyman, c. persson, j. sagemark, p. stenmark, m. sundstrom, j. uppenberg, m. upsten, a. g. thorsell, s. van den berg, j. weigelt, p. nordlund, structural genomics consortium (sgc)
Keywords: alternative splicing, lyase, transferase, polymorphism, decarboxylase, disease mutation, tim barrel dimer, orotidine-5'-decarboxylase, multifunctional enzyme, pyrimidine biosynthesis
- 2jh0.pdb.
hydrolase 19-feb-07 2jh0
Cl Na Ca
Title: human thrombin hirugen inhibitor complex.
Author: s. senger, c. chan, m. a. convery, j. a. hubbard, r. j. young, g. p. shah, n. s. watson
Keywords: inhibitor, sulfation, acute phase
- 2jh5.pdb.
hydrolase 20-feb-07 2jh5
Cl Na Ca
Title: human thrombin hirugen inhibitor complex.
Author: s. senger, c. chan, m. a. convery, j. a. hubbard, r. j. young, g. p. shah, n. s. watson
Keywords: inhibitor, sulfation, acute phase
- 2jh6.pdb.
hydrolase 20-feb-07 2jh6
Cl Na Ca
Title: human thrombin hirugen inhibitor complex.
Author: s. senger, c. chan, m. a. convery, j. a. hubbard, r. j. young, g. p. shah, n. s. watson
Keywords: inhibitor, sulfation, acute phase
- 2jhf.pdb.
oxidoreductase 22-feb-07 2jhf
Cd
Title: structural evidence for a ligand coordination switch in liver alcohol dehydrogenase
Author: r. meijers, h. w. adolph, z. dauter, k. s. wilson, v. s. lamzin, e. s. cedergren-zeppezauer
Keywords: metal coordination, nad, zinc, inhibition, acetylation, metal-binding, alcohol dehydrogenase
- 2jhg.pdb.
oxidoreductase 22-feb-07 2jhg
Zn
Title: structural evidence for a ligand coordination switch in liver alcohol dehydrogenase
Author: r. meijers, h. w. adolph, z. dauter, k. s. wilson, v. s. lamzin, e. s. cedergren-zeppezauer
Keywords: metal coordination, nad, zinc, inhibition, acetylation, metal-binding, alcohol dehydrogenase
- 2jhs.pdb.
inhibitor 23-feb-07 2jhs
Title: crystal structure of rhogdi k135h,k138h,k141h mutant
Author: d. r. cooper, m. zawadzki, z. s. derewenda
Keywords: inhibitor, acetylation, gtpase activation, crystal engineering
- 2jht.pdb.
inhibitor 23-feb-07 2jht
Li
Title: crystal structure of rhogdi k135t,k138t,k141t mutant
Author: d. r. cooper, k. grelewska, z. s. derewenda
Keywords: inhibitor, acetylation, gtpase activation, crystal engineering
- 2jhu.pdb.
inhibitor 23-feb-07 2jhu
Title: crystal structure of rhogdi e154a,e155a mutant
Author: d. r. cooper, m. pinkowska, z. s. derewenda
Keywords: inhibitor, acetylation, gtpase activation, crystal engineering
- 2jhv.pdb.
inhibitor 23-feb-07 2jhv
Title: crystal structure of rhogdi e154a,e155a mutant
Author: d. r. cooper, m. pinkowska, z. s. derewenda
Keywords: inhibitor, acetylation, gtpase activation, crystal engineering
- 2jhw.pdb.
inhibitor 23-feb-07 2jhw
Title: crystal structure of rhogdi e155a, e157a mutant
Author: d. r. cooper, k. grelewska, z. s. derewenda
Keywords: inhibitor, acetylation, gtpase activation, crystal engineering
- 2jhx.pdb.
inhibitor 23-feb-07 2jhx
Title: crystal structure of rhogdi e155h, e157h mutant
Author: d. r. cooper, m. zawadzki, z. s. derewenda
Keywords: inhibitor, acetylation, gtpase activation, crystal engineering
- 2jhy.pdb.
inhibitor 23-feb-07 2jhy
Title: crystal structure of rhogdi e155h, e157h mutant
Author: d. r. cooper, m. zawadzki, z. s. derewenda
Keywords: inhibitor, acetylation, gtpase activation, crystal engineering
- 2jhz.pdb.
inhibitor 23-feb-07 2jhz
Title: crystal structure of rhogdi e155s, e157s mutant
Author: d. r. cooper, m. pinkowska, z. s. derewenda
Keywords: inhibitor, acetylation, gtpase activation, crystal engineering
- 2ji0.pdb.
inhibitor 23-feb-07 2ji0
Title: crystal structure of rhogdi k138y, k141y mutant
Author: d. r. cooper, t. boczek, z. s. derewenda
Keywords: inhibitor, acetylation, gtpase activation, crystal engineering
- 2jm6.pdb.
apoptosis 17-oct-06 2jm6
(NMR, 20 structures)
Title: solution structure of mcl-1 complexed with noxab
Author: p. e. czabotar, e. f. lee, m. f. van delft, c. l. day, b. j. smith, d. c. s. huang, w. d. fairlie, m. g. hinds, p. m. colman
Keywords: mcl-1, bcl-2, helical bundle, bh3-only
- 2jmq.pdb.
gene regulation 28-nov-06 2jmq
Zn
(NMR, 25 structures)
Title: plant homeodomain finger of the tumour suppressor ing4
Author: a. palacios, p. garcia, d. padro, e. lopez-hernandez, f. j. blanco
Keywords: zn
- 2jng.pdb.
gene regulation 23-jan-07 2jng
(NMR, 20 structures)
Title: solution structure of the cul7-cph domain from homo sapiens; northeast structural genomics consortium target ht1.
Author: a. lemak, l. kaustov, j. lukin, s. duan, c. h. arrowsmith, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2jnr.pdb.
virus/viral protein 01-feb-07 2jnr
(NMR, minimized average structure)
Title: discovery and optimization of a natural hiv-1 entry inhibitor targeting the gp41 fusion peptide
Author: j. munch, l. standker, k. adermann, a. schulz, s. pohlmann, c. chaipan, t. biet, t. peters, b. meyer, d. wilhelm, h. lu, w. jing, s. jiang, w. forssmann, f. kirchhoff
- 2jo9.pdb.
ligase 01-mar-07 2jo9
(NMR, 10 structures)
Title: mouse itch 3rd ww domain complex with the epstein-barr virus latent membrane protein 2a derived peptide eeppppyed
Author: m. j. macias, a. z. shaw, p. martin-malpartida, b. morales, l. ruiz, x. ramirez-espain, f. yraola, m. royo
Keywords: ww, complex, epstein-barr virus, lmp2a
- 2joc.pdb.
ligase 06-mar-07 2joc
(NMR, 7 structures)
Title: mouse itch 3rd domain phosphorylated in t30
Author: m. j. macias, a. z. shaw, p. martin-malpartida, b. morales, l. ruiz, x. ramirez-espain, f. yraola, m. royo
Keywords: ww, phosphothreonine
- 2jov.pdb.
structural genomics, unknown function 04-apr-07 2jov
(NMR, 20 structures)
Title: nmr structure of clostridium perfringens protein cpe0013. northeast structural genomics target cpr31.
Author: k. ding, t. a. ramelot, c. g. anklin, h. wang, c. nwosu, k. cunningham, l. ma, r. xiao, j. liu, m. c. baran, g. v. t. swapna, t. b. acton, b. rost, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2nmx.pdb.
lyase 23-oct-06 2nmx
Zn Na
Title: structure of inhibitor binding to carbonic anhydrase i
Author: d. w. christianson, k. m. jude
Keywords: hydro lyase
- 2nn1.pdb.
lyase 23-oct-06 2nn1
Zn Na
Title: structure of inhibitor binding to carbonic anhydrase i
Author: d. w. christianson, k. m. jude
- 2nn7.pdb.
lyase 23-oct-06 2nn7
Zn
Title: structure of inhibitor binding to carbonic anhydrase i
Author: d. w. christianson, k. m. jude
- 2nng.pdb.
lyase 24-oct-06 2nng
Hg Zn
Title: structure of inhibitor binding to carbonic anhydrase ii
Author: d. w. christianson, k. m. jude
Keywords: sulfonamide
- 2nno.pdb.
lyase 24-oct-06 2nno
Hg Zn
Title: structure of inhibitor binding to carbonic anhydrase ii
Author: d. w. christianson, k. m. jude
Keywords: sulfonamide
- 2nns.pdb.
lyase 24-oct-06 2nns
Cl Hg Zn
Title: structure of inhibitor binding to carbonic anhydrase ii
Author: d. w. christianson, k. m. jude
Keywords: sulfonamide
- 2nnv.pdb.
lyase 24-oct-06 2nnv
Hg Zn
Title: structure of inhibitor binding to carbonic anhydrase ii
Author: d. w. christianson, k. m. jude
Keywords: sulfonamide
- 2nr2.pdb.
signaling protein 01-nov-06 2nr2
(NMR, 144 structures)
Title: the mumo (minimal under-restraining minimal over- restraining) method for the determination of native states ensembles of proteins
Author: b. richter, j. gsponer, p. varnai, x. salvatella, m. vendruscolo
Keywords: ubiquitin
- 2nrl.pdb.
transport protein 02-nov-06 2nrl
Fe
Title: blackfin tuna myoglobin
Author: e. r. schreiter, m. m. rodr guez, a. weichsel, w. r. montfort, j. bonaventura
Keywords: globin
- 2nrm.pdb.
transport protein 02-nov-06 2nrm
Fe
Title: s-nitrosylated blackfin tuna myoglobin
Author: e. r. schreiter, m. m. rodr guez, a. weichsel, w. r. montfort, j. bonaventura
Keywords: myoglobin, globin
- 2ntf.pdb.
immune system 07-nov-06 2ntf
Title: crystal structure of a quorum-quenching antibody in complex with an n-acyl-l-homoserine lactone analog
Author: e. w. debler, i. a. wilson
Keywords: antibody, fab, hapten complex, quorum sensing, homoserine lactone
- 2ntk.pdb.
hydrolase 07-nov-06 2ntk
Title: crystal structure of puro/imp from methanothermobacter thermoautotrophicus
Author: y. n. kang, a. tran, r. h. white, s. e. ealick
- 2ntl.pdb.
hydrolase 07-nov-06 2ntl
Title: crystal structure of puro/aicar from methanothermobacter thermoautotrophicus
Author: y. n. kang, a. tran, r. h. white, s. e. ealick
- 2ntm.pdb.
hydrolase 07-nov-06 2ntm
Title: crystal structure of puro from methanothermobacter thermoautotrophicus
Author: y. n. kang, a. tran, r. h. white, s. e. ealick
- 2nx0.pdb.
oxygen storage/transport 16-nov-06 2nx0
Fe
Title: ferrous nitrosyl blackfin tuna myoglobin
Author: e. r. schreiter, m. m. rodriguez, a. weichsel, w. r. montfort, j. bonaventura
Keywords: no, nitric oxide, ferrous nitrosyl
- 2nzd.pdb.
structural protein/dna 23-nov-06 2nzd
Mn
Title: nucleosome core particle containing 145 bp of dna
Author: m. s. ong, t. j. richmond, c. a. davey
Keywords: chromatin, histone, dna stretching, dna kinking, double-helix
- 2o01.pdb.
photosynthesis 27-nov-06 2o01
Mg Fe
Title: the structure of a plant photosystem i supercomplex at 3.4 angstrom resolution
Author: a. amunts, o. drory, n. nelson
- 2o4j.pdb.
hormone/growth factor receptor 04-dec-06 2o4j
Title: crystal structure of rat vitamin d receptor ligand binding domain complexed with vitiii 17-20z and the nr2 box of drip 205
Author: j. l. vanhooke, m. m. benning, h. f. deluca
- 2o4r.pdb.
hormone/growth factor receptor 04-dec-06 2o4r
Title: crystal structure of rat vitamin d receptor ligand binding domain complexed with vitiii 17-20e and the nr2 box of drip 205
Author: j. l. vanhooke, m. m. benning, h. f. deluca
- 2o4w.pdb.
hydrolase 05-dec-06 2o4w
Cl
Title: t4 lysozyme circular permutant
Author: m. llinas, s. m. crowder, n. echols, t. alber, s. marqusee
Keywords: protein stability, protein engineering, t4 lysozyme
- 2o79.pdb.
hydrolase 10-dec-06 2o79
Cl
Title: t4 lysozyme with c-terminal extension
Author: m. llinas, s. m. crowder, n. echols, t. alber, s. marqusee
Keywords: protein folding, lysozyme, circular permutant
- 2o7a.pdb.
hydrolase 10-dec-06 2o7a
Cl
Title: t4 lysozyme c-terminal fragment
Author: n. echols, e. kwon, s. m. marqusee, t. alber
Keywords: protein stability, lysozyme, circular permutant
- 2o9b.pdb.
transferase 13-dec-06 2o9b
Title: crystal structure of bacteriophytochrome chromophore binding domain
Author: j. r. wagner, j. s. brunzelle, r. d. vierstra, k. t. forest
Keywords: figure-of-eight knot, phytochromobilin, biliverdin, pas, gaf
- 2o9c.pdb.
transferase 13-dec-06 2o9c
Title: crystal structure of bacteriophytochrome chromophore binding domain at 1.45 angstrom resolution
Author: j. r wagner, j. s. brunzelle, r. d. vierstra, k. t. forest
Keywords: figure-of-eight knot, phytochromobilin, biliverdin, pas, gaf
- 2oa9.pdb.
hydrolase 15-dec-06 2oa9
Cl Cd
Title: restriction endonuclease mvai in the absence of dna
Author: m. kaus-drobek, h. czapinska, m. sokolowska, g. tamulaitis, r. h. szczepanowski, k. urbanke, v. siksnys, m. bochtler
Keywords: restriction enzyme, mvai
- 2oaa.pdb.
hydrolase/dna 15-dec-06 2oaa
Ca
Title: restriction endonuclease mvai-cognate dna substrate complex
Author: m. kaus-drobek, h. czapinska, m. sokolowska, g. tamulaitis, r. h. szczepanowski, k. urbanke, v. siksnys, m. bochtler
Keywords: dna substrate complex, restriction enzyme, mvai
- 2obg.pdb.
de novo protein, protein binding 19-dec-06 2obg
Title: crystal structure of monobody mbp-74/maltose binding protein fusion complex
Author: r. n. gilbreth, v. tereshko, s. koide
Keywords: binding protein, antibody mimic, binary interface
- 2oph.pdb.
hydrolase 29-jan-07 2oph
F Na
Title: human dipeptidyl peptidase iv in complex with an alpha amino acid inhibitor
Author: g. scapin, a. e. weber, j. l. duffy
Keywords: beta-propeller, dimer, type 2 diabetes, selective inhibitor
- 2orj.pdb.
sugar binding protein 02-feb-07 2orj
Ca
Title: crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein d in complex with n-acetyl mannosamine
Author: j. f. head
- 2ork.pdb.
sugar binding protein 02-feb-07 2ork
Ca
Title: crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein d in complex with inositol-1-phosphate
Author: j. f. head
Keywords: carbohydrate recognition domain, trimeric
- 2os9.pdb.
sugar binding protein 05-feb-07 2os9
Ca
Title: crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein d in complex with myoinositol
Author: j. f. head
Keywords: carbohydrate recognition domain, trimeric
- 2otb.pdb.
fluorescent protein 07-feb-07 2otb
Title: crystal structure of a monomeric cyan fluorescent protein in the fluorescent state
Author: j. n. henderson, h. ai, r. e. campbell, s. j. remington
Keywords: fluorescent protein
- 2ote.pdb.
fluorescent protein 07-feb-07 2ote
Title: crystal structure of a monomeric cyan fluorescent protein in the photobleached state
Author: j. n. henderson, h. ai, r. e. campbell, s. j. remington
Keywords: fluorescent protein
- 2ouz.pdb.
hormone/growth factor 12-feb-07 2ouz
Title: crystal structure of estrogen receptor alpha-lasofoxifene complex
Author: f. f. vajdos, j. pandit
Keywords: serm, estrogen
- 2ovh.pdb.
transcription 13-feb-07 2ovh
Title: progesterone receptor with bound asoprisnil and a peptide from the co-repressor smrt
Author: k. p. madauss, s. -j. deng, s. a. short, e. l. stewart, s. p. williams
Keywords: pr, nuclear receptor, steroid receptor, co-repressor, asoprisnil
- 2ovm.pdb.
transcription 14-feb-07 2ovm
Title: progesterone receptor with bound asoprisnil and a peptide from the co-repressor ncor
Author: k. p. madauss, s. -j. deng, s. a. short, e. l. stewart, s. p. williams
Keywords: pr, nuclear receptor, steroid receptor, co-repressor, asoprisnil, ncor
- 2owl.pdb.
recombination 16-feb-07 2owl
Ca Se
Title: crystal structure of e. coli rdgc
Author: g. s. briggs, p. a. mcewan, j. yu, t. moore, j. emsley, r. g. lloyd
Keywords: replication, reca
- 2oyv.pdb.
neuropeptide 23-feb-07 2oyv
(NMR, 14 structures)
Title: neurotensin in dpc micelles
Author: j. p. monti, j. coutant, p. a. curmi
- 2oyw.pdb.
neuropeptide 23-feb-07 2oyw
(NMR, 15 structures)
Title: neurotensin in tfe:h2o (80:20)
Author: j. p. monti, j. coutant, p. a. curmi
- 2p0c.pdb.
transferase 28-feb-07 2p0c
Mg
Title: catalytic domain of the proto-oncogene tyrosine-protein kinase mer
Author: j. r. walker, x. huang, p. j. finerty jr. , j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2p0d.pdb.
ligand binding protein 28-feb-07 2p0d
Title: arhgap9 ph domain in complex with ins(1,4,5)p3
Author: d. f. j. ceccarelli, i. blasutig, m. goudreault, j. ruston, t. pawson, f. sicheri
Keywords: pleckstrin homology domain
- 2p0e.pdb.
transferase 28-feb-07 2p0e
Cl U Se
Title: human nicotinamide riboside kinase 1 in complex with tiazofurin
Author: w. m. rabeh, w. tempel, l. nedyalkova, r. landry, c. h. arrowsmith, a. m. edwards, m. sundstrom, j. weigelt, a. bochkarev, c. brenner, h. park, structural genomics consortium (sgc)
Keywords: nad+, nicotinamide riboside, nrk1, tiazofurin, adp, structural genomics, structural genomics consortium, sgc
- 2p0f.pdb.
ligand binding protein 28-feb-07 2p0f
Title: arhgap9 ph domain in complex with ins(1,3,5)p3
Author: d. f. j. ceccarelli, i. blasutig, m. goudreault, j. ruston, t. pawson, f. sicheri
Keywords: pleckstrin homology domain
- 2p0h.pdb.
ligand binding protein 28-feb-07 2p0h
Title: arhgap9 ph domain in complex with ins(1,3,4)p3
Author: d. f. j. ceccarelli, i. blasutig, m. goudreault, j. ruston, t. pawson, f. sicheri
Keywords: pleckstrin homology domain
- 2p32.pdb.
chaperone 08-mar-07 2p32
Title: crystal structure of the c-terminal 10 kda subdomain from c. elegans hsp70
Author: l. j. worrall, m. d. walkinshaw
- 2p74.pdb.
hydrolase 19-mar-07 2p74
K
Title: ctx-m-9 class a beta-lactamase apo crystal structure at 0.88 angstrom resolution
Author: y. chen, r. bonnet, b. k. shoichet
Keywords: beta-lactamase, ultra-high resolution, acylation, esbl
- 2p8o.pdb.
hydrolase 22-mar-07 2p8o
V
Title: crystal structure of a benzohydroxamic acid/vanadate complex bound to chymotrypsin a
Author: a. moulin, j. h. bell, r. f. pratt, d. ringe
- 2p8w.pdb.
translation 23-mar-07 2p8w
(cryo-electron microscopy)
Title: fitted structure of eef2 in the 80s:eef2:gdpnp cryo-em reconstruction
Author: d. j. taylor, j. nilsson, a. r. merrill, g. r. andersen, p. nissen, j. frank
Keywords: translocation, gtpase, 80s ribosome
- 2p8x.pdb.
translation 23-mar-07 2p8x
(cryo-electron microscopy)
Title: fitted structure of adpr-eef2 in the 80s:adpr-eef2:gdpnp cryo-em reconstruction
Author: d. j. taylor, j. nilsson, a. r. merrill, g. r. andersen, p. nissen, j. frank
Keywords: translocation, gtpase, 80s ribosome
- 2p8y.pdb.
translation 23-mar-07 2p8y
(cryo-electron microscopy)
Title: fitted structure of adpr-eef2 in the 80s:adpr- eef2:gdp:sordarin cryo-em reconstruction
Author: d. j. taylor, j. nilsson, a. r. merrill, g. r. andersen, p. nissen, j. frank
Keywords: translocation, gtpase, 80s ribosome
- 2p8z.pdb.
translation 23-mar-07 2p8z
(cryo-electron microscopy)
Title: fitted structure of adpr-eef2 in the 80s:adpr- eef2:gdpnp:sordarin cryo-em reconstruction
Author: d. j. taylor, j. nilsson, a. r. merrill, g. r. andersen, p. nissen, j. frank
Keywords: translocation, gtpase, 80s ribosome
- 2p90.pdb.
structural genomics, unknown function 23-mar-07 2p90
Title: the crystal structure of a protein of unknown function from corynebacterium glutamicum atcc 13032
Author: r. zhang, e. duggan, m. gu, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi-2, mcsg, protein structure initiative, midwest center for structural genomics
- 2pcv.pdb.
ribonucleic acid 30-mar-07 2pcv
(NMR, 10 structures)
Title: solution structure of an rrna substrate bound to the pseudouridylation pocket of a box h/aca snorna
Author: h. jin, j. p. loria, p. b. moore
Keywords: pseudouridylation, rrna
- 2pcw.pdb.
ribonucleic acid 30-mar-07 2pcw
(NMR, 17 structures)
Title: solution structure of an rrna substrate bound to the pseudouridylation pocket of a box h/aca snorna
Author: h. jin, j. p. loria, p. b. moore
Keywords: pseudouridylation pocket, rrna
- 2pd6.pdb.
oxidoreductase 31-mar-07 2pd6
Title: structure of human hydroxysteroid dehydrogenase type 8, hsd17b8
Author: a. p. turnbull, e. salah, o. gileadi, p. savitsky, k. guo, g. bunkoczi, a. c. w. pike, e. ugochukwu, c. umeano, f. von delft, j. weigelt, c. h. arrowsmith, m. sundstrom, a. edwards, u. oppermann, structural genomics consortium (sgc)
Keywords: steroid metabolism, lipid metabolism, structural genomics, structural genomics consortium, sgc
- 2pfs.pdb.
structural genomics, unknown function 05-apr-07 2pfs
Cl Se
Title: crystal structure of universal stress protein from nitrosomonas europaea
Author: m. chruszcz, e. evdokimova, m. cymborowski, o. kagan, a. savchenko, a. edwards, a. joachimiak, w. minor, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2pg0.pdb.
oxidoreductase 06-apr-07 2pg0
Title: crystal structure of acyl-coa dehydrogenase from geobacillus kaustophilus
Author: l. chen, l-q. chen, a. ebihara, a. shinkai, s. kuramitsu, s. yokoyama, m. zhao, y. li, z-q. fu, j. p. rose, b-c. wang, southeast collaboratory for structural genomics (secsg), riken structural genomics/proteomics initiative (rsgi)
Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2ph3.pdb.
oxidoreductase 10-apr-07 2ph3
Title: crystal structure of 3-oxoacyl-[acyl carrier protein] reductase ttha0415 from thermus thermophilus
Author: j. t. swindell ii, l. chen, j. zhu, a. ebihara, a. shinkai, s. kuramitsu, s. yokoyama, z-q. fu, j. chrzas, j. p. rose, b. c. wang, southeast collaboratory for structural genomics (secsg), riken structural genomics/proteomics initiative (rsgi)
Keywords: thermus thermophilus, structural genomics, southeast collaboratory for structural genomics, secsg, riken structural genomics/proteomics initiative, rsgi, psi, protein structure initiative
- 2ph7.pdb.
structural genomics, unknown function 10-apr-07 2ph7
Se
Title: crystal structure of af2093 from archaeoglobus fulgidus
Author: j. c. chang, h. yang, j. hwang, j. zhu, l. chen, z-q. fu, h. xu, j. p. rose, b-c. wang, southeast collaboratory for structural genomics (secsg)
Keywords: archaeoglobus fulgidus, structural genomics, southeast collaboratory for structural genomics, secsg, psi, protein structure initiative
- 2pha.pdb.
hydrolase 10-apr-07 2pha
Mn
Title: crystal structure of native, unliganded human arginase at 1.90 resolution
Author: l. di costanzo, m. e. pique, d. w. christianson
Keywords: mechanism
- 2phc.pdb.
structural genomics, unknown function 10-apr-07 2phc
Title: crystal structure of conserved uncharacterized protein ph0987 from pyrococcus horikoshii
Author: j. t. swindell ii, l. chen, j. zhu, a. ebihara, a. shinkai, s. kuramitsu, s. yokoyama, z-q. fu, j. chrzas, j. p. rose, b-c. wang, southeast collaboratory for structural genomics (secsg), riken structural genomics/proteomics initiative (rsgi)
Keywords: riken structural genomics/proteomics initiative, rsgi
- 2pho.pdb.
hydrolase 11-apr-07 2pho
Mn
Title: crystal structure of human arginase i complexed with thiosemicarbazide at 1.95 resolution
Author: l. di costanzo, d. w. christianson
Keywords: fragment, inhibitor design
- 2pi8.pdb.
hydrolase 13-apr-07 2pi8
Se
Title: crystal structure of e. coli mlta with bound chitohexaose
Author: k. e. van straaten, t. r. m. barends, b. w. dijkstra, a. m. w. h. thunnissen
- 2pic.pdb.
hydrolase 13-apr-07 2pic
Title: e. coli lytic transglycosylase mlta-d308a in apo-2 form
Author: k. e. van straaten, b. w. dijkstra, a. m. w. h. thunnissen
- 2pjf.pdb.
hydrolase 16-apr-07 2pjf
(NMR, 20 structures)
Title: solution structure of rhodostomin
Author: w. -j. chuang, y. -c. chen, c. -y. chen, y. -t. chang
Keywords: rhodostomin
- 2pjg.pdb.
hydrolase 16-apr-07 2pjg
(NMR, 20 structures)
Title: solution structure of rhodostomin d51e mutant
Author: w. -j. chuang, y. -c. chen, c. -y. chen, l. -j. chou
Keywords: rhodostomin
- 2pjh.pdb.
transport protein 16-apr-07 2pjh
(NMR)
Title: strctural model of the p97 n domain- npl4 ubd complex
Author: r. isaacson, v. e. pye, s. simpson, h. h. meyer, x. zhang, p. freemont
Keywords: ufd1, npl4, aaa, atpase, protein binding
- 2pji.pdb.
hydrolase 16-apr-07 2pji
(NMR, 20 structures)
Title: solution structure of rhodostomin p48a mutant
Author: w. -j. chuang, y. -c. liu, j. -h. shiu
Keywords: rhodostomin
- 2pjj.pdb.
hydrolase 16-apr-07 2pjj
Title: e. coli lytic transglycosylase mlta-d308a in apo-1 form
Author: k. e. van straaten, b. w. dijkstra, a. m. w. h. thunnissen
- 2pk5.pdb.
viral protein 17-apr-07 2pk5
Title: crystal structure of hiv-1 protease (q7k, l33i, l63i ) in complex with kni-10075
Author: a. a. armstrong, v. lafont, y. kiso, e. freire, l. m. amzel
- 2pk6.pdb.
viral protein 17-apr-07 2pk6
Title: crystal structure of hiv-1 protease (q7k, l33i, l63i) in complex with kni-10033
Author: a. a. armstrong, v. lafont, y. kiso, e. freire, l. m. amzel
- 2pke.pdb.
hydrolase 17-apr-07 2pke
Cl Mg Se
Title: crystal structure of haloacid delahogenase-like family hydrolase (np_639141.1) from xanthomonas campestris at 1.81 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: haloacid delahogenase-like family hydrolase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2pkt.pdb.
structural genomics, unknown function 18-apr-07 2pkt
Cl Ca
Title: crystal structure of the human clp-36 (pdlim1) bound to the c-terminal peptide of human alpha-actinin-1
Author: j. uppenberg, c. gileadi, j. elkins, j. bray, n. burgess-brown, e. salah, o. gileadi, g. bunkoczi, e. ugochukwu, c. umeano, f. von delft, j. weigelt, c. h. arrowsmith, a. edwards, m. sundstrom, d. a. doyle, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2plp.pdb.
immune system/protein binding 20-apr-07 2plp
(NMR)
Title: ultra high resolution backbone conformation of protein gb1 from residual dipolar couplings alone
Author: g. bouvignies, s. meier, s. grzesiek, m. blackledge
- 2plw.pdb.
transferase 20-apr-07 2plw
Title: crystal structure of a ribosomal rna methyltransferase, putative, from plasmodium falciparum (pf13_0052).
Author: a. k. wernimont, a. hassanali, l. lin, j. lew, y. zhao, m. ravichandran, g. wasney, m. vedadi, i. kozieradzki, m. schapira, a. bochkarev, a. m. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, r. hui, w. qiu, structural genomics consortium (sgc)
Keywords: malaria, plasmodium falciparum, rna, sam, structural genomics, structural genomics consortium, sgc
- 2pmb.pdb.
structural genomics, unknown function 20-apr-07 2pmb
Se
Title: crystal structure of predicted nucleotide-binding protein from vibrio cholerae
Author: y. patskovsky, c. zhan, w. shi, r. toro, j. m. sauder, j. gilmore, m. iizuka, m. maletic, t. gheyi, s. r. wasserman, d. smith, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: psi, protein structure initiative, new york structural genomics research consortium, nysgrc, new york structural genomix research consortium, nysgxrc
- 2pmm.pdb.
blood clotting 23-apr-07 2pmm
Ca
Title: crystal structure of active site inhibited coagulation factor viia in complex with soluble tissue factor
Author: j. r. bjelke, h. b. rasmussen
- 2pmq.pdb.
isomerase 23-apr-07 2pmq
Mg Se
Title: crystal structure of a mandelate racemase/muconate lactonizing enzyme from roseovarius sp. htcc2601
Author: j. b. bonanno, m. rutter, k. t. bain, c. lau, v. sridhar, d. smith, s. wasserman, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: isomerase, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
- 2pmr.pdb.
structural genomics, unknown function 23-apr-07 2pmr
Title: crystal structure of a protein of unknown function from methanobacterium thermoautotrophicum
Author: j. b. bonanno, j. freeman, k. t. bain, b. wu, s. ozyurt, d. smith, s. wasserman, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: unknown function, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
- 2pmw.pdb.
hydrolase 23-apr-07 2pmw
Title: the crystal structure of proprotein convertase subtilisin kexin type 9 (pcsk9)
Author: d. e. piper, w. g. romanow, s. t. thibault, n. p. c. walker
Keywords: subtilisin, protease
- 2pmy.pdb.
structural genomics, unknown function 23-apr-07 2pmy
U Ca
Title: ef-hand domain of human rasef
Author: h. zhu, y. shen, j. wang, w. tempel, r. landry, c. h. arrowsmith, a. m. edwards, m. sundstrom, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: efh, calcium-binding domain, structural genomics, structural genomics consortium, sgc
- 2pn1.pdb.
ligase 23-apr-07 2pn1
Se
Title: crystal structure of carbamoylphosphate synthase large subunit (split gene in mj) (zp_00538348.1) from exiguobacterium sp. 255-15 at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: atp-grasp domain, carbamoylphosphate synthase large subunit (split gene in mj), structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2pn2.pdb.
structural genomics, unknown function 23-apr-07 2pn2
Cl Se
Title: crystal structure of uncharacterized protein (yp_263861.1) from psychrobacter arcticus 273-4 at 2.15 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: uncharacterized protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2pnk.pdb.
structural genomics, unknown function 24-apr-07 2pnk
Cl Na Se As
Title: crystal structure of uncharacterized protein (np_241359.1) from bacillus halodurans at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: uncharacterized protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2pnt.pdb.
structural genomics, unknown function 25-apr-07 2pnt
Cl
Title: crystal structure of the pdz domain of human grasp (grp1) in complex with the c-terminal peptide of the metabotropic glutamate receptor type 1
Author: j. elkins, e. papagrigoriou, c. cooper, c. gileadi, j. uppenberg, j. bray, f. von delft, a. c. w. pike, e. ugochukwu, c. umeano, o. gileadi, a. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, d. a. doyle, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2pnw.pdb.
hydrolase 25-apr-07 2pnw
Title: crystal structure of membrane-bound lytic murein transglycosylase from agrobacterium tumefaciens
Author: j. b. bonanno, m. dickey, k. t. bain, m. iizuka, s. ozyurt, d. smith, s. wasserman, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
Keywords: glycosylase, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
- 2poe.pdb.
isomerase 26-apr-07 2poe
Title: crystal structure of cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_1660
Author: a. k. wernimont, j. lew, t. hills, a. hassanali, l. lin, g. wasney, y. zhao, i. kozieradzki, m. vedadi, m. schapira, a. bochkarev, a. m. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, r. hui, j. d. artz, m. amani, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2pok.pdb.
hydrolase 26-apr-07 2pok
Mn
Title: crystal structure of a m20 family metallo peptidase from streptococcus pneumoniae
Author: g. minasov, l. shuvalova, j. s. brunzelle, i. i. vorontsov, o. kiryukhina, f. r. collart, a. joachimiak, w. f. anderson, midwest center for structural genomics (mcsg)
Keywords: m20 family peptidase, metallo protein, mcsg, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics
- 2poy.pdb.
isomerase 27-apr-07 2poy
Title: cryptosporidium parvum cyclophilin type peptidyl-prolyl cis- trans isomerase cgd2_4120 in complex with cyclosporin a
Author: a. k. wernimont, j. lew, t. hills, i. kozieradzki, y. h. lin, a. hassanali, y. zhao, m. schapira, c. h. arrowsmith, a. m. edwards, j. weigelt, m. sundstrom, a. bochkarev, r. hui, j. d. artz, t. xiao, structural genomics consortium (sgc)
Keywords: parvum, cyclosporin, cyclophilin, structural genomics, structural genomics consortium, sgc
- 2ppi.pdb.
structural protein 30-apr-07 2ppi
Title: structure of the btb (tramtrack and bric a brac) domain of human gigaxonin
Author: a. amos, a. p. turnbull, j. tickle, t. keates, a. bullock, p. savitsky, n. burgess-brown, j. e. debreczeni, e. ugochukwu, c. umeano, a. c. w. pike, e. papagrigoriou, m. sundstrom, c. h. arrowsmith, j. weigelt, a. edwards, f. von delft, s. knapp, structural genomics consortium (sgc)
Keywords: protein degradation, structural genomics, structural genomics consortium, sgc
- 2uv0.pdb.
transcription 08-mar-07 2uv0
Se
Title: structure of the p. aeruginosa lasr ligand-binding domain bound to its autoinducer
Author: m. j. bottomley, e. muraglia, r. bazzo, a. carfi
Keywords: quorum sensing, transcription regulation, alpha-beta-alpha sandwich, transcriptional regulator, activator, dna-binding, transcription
- 2uv4.pdb.
transferase 09-mar-07 2uv4
Title: crystal structure of a cbs domain pair from the regulatory gamma1 subunit of human ampk in complex with amp
Author: p. day, a. sharff, l. parra, a cleasby, m. williams, s. horer, h. nar, n. redemann, i. tickle, j. yon
Keywords: lipid synthesis, fatty acid biosynthesis, ampk gamma1 subunit cbs 3 plus 4 amp regulatory subunit, transferase
- 2uv5.pdb.
transferase 09-mar-07 2uv5
Title: crystal structure of a cbs domain pair from the regulatory gamma1 subunit of human ampk in complex with amp
Author: p. day, a. sharff, l. parra, a cleasby, m. williams, s. horer, h. nar, n. redemann, i. tickle, j. yon
Keywords: lipid synthesis, fatty acid biosynthesis, ampk gamma1 subunit cbs 3 plus 4 amp regulatory subunit.a, transferase
- 2uv6.pdb.
transferase 09-mar-07 2uv6
Title: crystal structure of a cbs domain pair from the regulatory gamma1 subunit of human ampk in complex with amp
Author: p. day, a. sharff, l. parra, a cleasby, m. williams, s. horer, h. nar, n. redemann, i. tickle, j. yon
Keywords: lipid synthesis, fatty acid biosynthesis, ampk gamma1 subunit cbs 3 plus 4 amp regulatory subunit. r transferase
- 2uv7.pdb.
transferase 09-mar-07 2uv7
Title: crystal structure of a cbs domain pair from the regulatory gamma1 subunit of human ampk in complex with amp
Author: p. day, a. sharff, l. parra, a cleasby, m. williams, s. horer, h. nar, n. redemann, i. tickle, j. yon
Keywords: lipid synthesis, fatty acid biosynthesis, ampk gamma1 subunit cbs 3 plus 4 amp regulatory subunit. r transferase
- 2uve.pdb.
hydrolase 09-mar-07 2uve
Ni
Title: structure of yersinia enterocolitica family 28 exopolygalacturonase
Author: d. w. abbott, a. b. boraston
Keywords: pectin, cell wall, hydrolase, periplasm, yersinia enterocolitica, beta-helix, glycosidase, exo-activity
- 2uvf.pdb.
hydrolase 09-mar-07 2uvf
Ni
Title: structure of yersinia enterocolitica family 28 exopolygalacturonase in complex with digalaturonic acid
Author: d. w. abbott, a. b. boraston
Keywords: pectin, cell wall, hydrolase, periplasm, yersinia enterocolitica, beta-helix, glycosidase, exo-activity
- 2uvm.pdb.
transferase 12-mar-07 2uvm
Na
Title: structure of pkbalpha ph domain in complex with a novel inositol headgroup surrogate, benzene 1,2,3,4- tetrakisphosphate
Author: d. komander, s. j. mills, m. n. trusselle, s. t. safrany, d. m. f. van aalten, b. v. l. potter
Keywords: glycogen metabolism, kinase, cancer, inositol, apoptosis, transport, carbohydrate metabolism, ph domain, atp-binding, transferase, sugar transport
- 2uvr.pdb.
transferase 13-mar-07 2uvr
Ca
Title: crystal structures of mutant dpo4 dna polymerases with 8- oxog containing dna template-primer constructs
Author: a. irimia, m. egli
Keywords: metal- binding, mutator protein, dna replication
- 2uvu.pdb.
transferase 13-mar-07 2uvu
Ca
Title: crystal structures of mutant dpo4 dna polymerases with 8- oxog containing dna template-primer constructs
Author: a. irimia, m. egli
Keywords: metal- binding, mutator protein, dna replication
- 2uvv.pdb.
transferase 14-mar-07 2uvv
Ca
Title: crystal structures of mutant dpo4 dna polymerases with 8- oxog containing dna template-primer constructs
Author: a. irimia, m. egli
Keywords: metal- binding, mutator protein, dna replication
- 2uvw.pdb.
transferase 14-mar-07 2uvw
Ca
Title: crystal structures of mutant dpo4 dna polymerases with 8- oxog containing dna template-primer constructs
Author: a. irimia, m. egli
Keywords: metal- binding, mutator protein, dna replication
- 2uvx.pdb.
transferase/inhibitor complex 15-mar-07 2uvx
Title: structure of pka-pkb chimera complexed with 7-azaindole
Author: t. g. davies, a. donald, t. mchardy, m. g. rowlands, l. j. hunter, r. g. boyle, g. w. aherne, m. d. garrett, i. collins
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, transferase/inhibitor complex, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylatio...
- 2uvy.pdb.
transferase/inhibitor complex 15-mar-07 2uvy
Title: structure of pka-pkb chimera complexed with methyl-(4-(9h- purin-6-yl)-benzyl)-amine
Author: t. g. davies, a. donald, t. mchardy, m. g. rowlands, l. j. hunter, r. g. boyle, g. w. aherne, m. d. garrett, i. collins
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uvz.pdb.
transferase/inhibitor complex 15-mar-07 2uvz
Title: structure of pka-pkb chimera complexed with c-phenyl-c-(4-( 9h-purin-6-yl)-phenyl)-methylamine
Author: t. g. davies, a. donald, t. mchardy, m. g. rowlands, l. j. hunter, r. g. boyle, g. w. aherne, m. d. garrett, i. collins
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw0.pdb.
transferase/inhibitor complex 15-mar-07 2uw0
Cl
Title: structure of pka-pkb chimera complexed with 6-(4-(4-(4- chloro-phenyl)-piperidin-4-yl)-phenyl)-9h-purine
Author: t. g. davies, a. donald, t. mchardy, m. g. rowlands, l. j. hunter, r. g. boyle, g. w. aherne, m. d. garrett, i. collins
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw1.pdb.
oxidoreductase 15-mar-07 2uw1
Na Fe
Title: ivy desaturase structure
Author: j. e. guy, e. whittle, d. kumaran, y. lindqvist, j. shanklin
Keywords: four-helix bundle, oxidoreductase, lipid synthesis, transit peptide, fatty acid biosynthesis, nadp, plastid, chloroplast, di-ron enzyme
- 2uw3.pdb.
transferase/inhibitor complex 19-mar-07 2uw3
Title: structure of pka-pkb chimera complexed with 5-methyl-4- phenyl-1h-pyrazole
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw4.pdb.
transferase 19-mar-07 2uw4
Title: structure of pka-pkb chimera complexed with 2-(4-(5-methyl- 1h-pyrazol-4-yl)-phenyl)-ethylamine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation
- 2uw5.pdb.
transferase/inhibitor complex 19-mar-07 2uw5
Cl
Title: structure of pka-pkb chimera complexed with (r)-2-(4- chloro-phenyl)-2-(4-1h-pyrazol-4-yl)-phenyl)-ethylamine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw6.pdb.
transferase/inhibitor complex 19-mar-07 2uw6
Cl
Title: structure of pka-pkb chimera complexed with (s)-2-(4- chloro-phenyl)-2-(4-1h-pyrazol-4-yl)-phenyl)-ethylamine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw7.pdb.
transferase/inhibitor complex 19-mar-07 2uw7
Cl
Title: structure of pka-pkb chimera complexed with 4-(4-chloro- phenyl)-4-(4-(1h-pyrazol-4-yl)-phenyl)-piperidine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw8.pdb.
transferase/inhibitor complex 19-mar-07 2uw8
Cl
Title: structure of pka-pkb chimera complexed with 2-(4-chloro- phenyl)-2-phenyl-ethylamine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation, transferase/inhibitor comple...
- 2uw9.pdb.
transferase/inhibitor complex 19-mar-07 2uw9
Cl
Title: structure of pkb-beta (akt2) complexed with 4-(4-chloro- phenyl)-4-(4-(1h-pyrazol-4-yl)-phenyl)-piperidine
Author: t. g. davies, g. saxty, s. j. woodhead, v. berdini, m. l. verdonk, p. g. wyatt, r. g. boyle, d. barford, r. downham, m. d. garrett, r. a. carr
Keywords: serine/threonine-protein kinase, kinase, transferase, atp-binding, phosphorylation, nucleotide-binding, alternative splicing, transferase/inhibitor complex
- 2uwl.pdb.
hydrolase 22-mar-07 2uwl
Cl
Title: selective and dual action orally active inhibitors of thrombin and factor xa
Author: r. j. young, d. brown, c. l. burns-kurtis, c. chan, m. a. convery, j. a. hubbard, h. a. kelly, a. j. pateman, a. patikis, s. senger, g. p. shah, j. r. toomey, n. s. watson, p. zhou
Keywords: cleavage on pair of basic residues
- 2uwm.pdb.
translation 22-mar-07 2uwm
Title: c-terminal domain(wh2-wh4) of elongation factor selb in complex with secis rna
Author: t. ose, n. soler, l. rasubala, k. kuroki, d. kohda, d. fourmy, s. yoshizawa, k. maenaka
Keywords: translation, gtp-binding, nucleotide-binding, selenocysteine-specific elongation factor
- 2uwo.pdb.
hydrolase 22-mar-07 2uwo
Cl
Title: selective and dual action orally active inhibitors of thrombin and factor xa
Author: r. j. young, d. brown, c. l. burns-kurtis, c. chan, m. a. convery, j. a. hubbard, h. a. kelly, a. j. pateman, a. patikis, s. senger, g. p. shah, j. r. toomey, n. s. watson, p. zhou
Keywords: cleavage on pair of basic residues
- 2uwp.pdb.
hydrolase 22-mar-07 2uwp
Cl Mg Ca
Title: factor xa inhibitor complex
Author: r. j. young, d. brown, c. l. burns-kurtis, c. chan, m. a. convery, j. a. hubbard, h. a. kelly, a. j. pateman, a. patikis, s. senger, g. p. shah, j. r. toomey, n. s. watson, p. zhou, j. h. thorpe
Keywords: cleavage on pair of basic residues
- 2uxc.pdb.
ribosome 28-mar-07 2uxc
Mg K Zn
Title: crystal structure of an extended trna anticodon stem loop in complex with its cognate mrna ucgu in the context of the thermus thermophilus 30s subunit.
Author: c. m. dunham, m. selmer, s. s. phelps, a. c. kelley, t. suzuki, s. joseph, v. ramakrishnan
Keywords: rna- binding, anticodon, stem-loop, frameshift, zinc-finger, rrna-binding, trna-binding, transfer rna
- 2uxh.pdb.
transcription 28-mar-07 2uxh
Title: ttgr in complex with quercetin
Author: y. alguel, c. meng, w. teran, t. krell, j. l. ramos, m. -t. gallegos, x. zhang
Keywords: multidrug binding protein, transcriptional regulator of efflux pumps, repressor, dna-binding, tetr familiy, transcription
- 2uxi.pdb.
transcription 28-mar-07 2uxi
Title: phloretin in complex with ttgr
Author: y. alguel, c. meng, w. teran, t. krell, j. l. ramos, m. -t. gallegos, x. zhang
Keywords: multidrug binding protein, repressor, dna-binding, tetr family, transcription, transcriptional regulator of efflux pumps
- 2uxo.pdb.
transcription 28-mar-07 2uxo
Title: ttgr in complex with tetracycline
Author: y. alguel, c. meng, w. teran, t. krell, j. l. ramos, m. -t gallegos, x. zhang
Keywords: transcription regulation, multidrug binding protein, transcriptional regulator of efflux pumps, repressor, tetr family, dna-binding, transcription
- 2uxp.pdb.
transcription 29-mar-07 2uxp
Cl
Title: ttgr in complex chloramphenicol
Author: y. alguel, c. meng, w. teran, t. krell, j. l. ramos, m. -t. gallegos, x. zhang
Keywords: transcription regulation, multidrug binding protein, transcriptional regulator of efflux pumps, repressor, tetr family, dna-binding, transcription
- 2uxu.pdb.
transcription 29-mar-07 2uxu
Title: ttgr in complex with naringenin
Author: y. alguel, c. meng, w. teran, t. krell, j. l. ramos, m. -t. gallegos, x. zhang
Keywords: transcription regulation, multidrug binding protein, transcriptional regulator of efflux pumps, repressor, tetr family, dna-binding, transcription
- 2uyx.pdb.
hydrolase 20-apr-07 2uyx
Zn
Title: metallo-beta-lactamase (1bc2) single point mutant d120s
Author: l. i. larrull, s. m. fabiane, j. m. kowalski, b. bennett, b. j. sutton, a. j. vila
Keywords: hydrolase, penicillinase, metal-binding, antibiotic resistance, metallo beta- lactamase
- 2uz9.pdb.
hydrolase 26-apr-07 2uz9
Zn
Title: human guanine deaminase (guad) in complex with zinc and its product xhantine.
Author: m. moche, m. welin, c. arrowsmith, h. berglund, r. busam, r. collins, l. g. dahlgren, a. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg-schiavone, i. johansson, a. kallas, t. karlberg, t. kotenyova, l. lehtio, t. nyman, d. ogg, c. persson, j. sagemark, p. stenmark, m. sundstrom, a. g. thorsell, s. van-den-berg, j. weigelt, p. nordlund, structural genomics consortium (sgc)
Keywords: hydrolase, purine metabolism, guanine aminohydrolase
- 2uzc.pdb.
signaling protein 27-apr-07 2uzc
Cl
Title: structure of human pdlim5 in complex with the c-terminal peptide of human alpha-actinin-1
Author: g. bunkoczi, j. elkins, e. salah, n. burgess-brown, e. papagrigoriou, a. c. w. pike, a. turnbull, o. gileadi, f. von delft, c. h. arrowsmith, a. edwards, m. sundstrom, j. weigelt, d. doyle
Keywords: metal-binding, enigma homolog, phosphorylation, signaling protein, zinc, lim domain, pdz domain, acetylation
- 2uzg.pdb.
hydrolase 27-apr-07 2uzg
Zn
(NMR. 20 structures)
Title: zf-ubp domain of vdu1
Author: m. d. allen, m. bycroft
Keywords: de-ubiquitination, alternative splicing, metal-binding, thiol protease, ubl conjugation, zinc, vdu1, zf-ubp, protease, hydrolase, zinc-finger
- 2ywp.pdb.
transferase 21-apr-07 2ywp
Cl
Title: crystal structure of chk1 with a urea inhibitor
Author: c. park
- 2yx2.pdb.
lyase 23-apr-07 2yx2
Title: crystal structure of cloned trimeric hyluranidase from streptococcus pyogenes at 2.8 a resolution
Author: p. mishra, r. prem kumar, v. bhakuni, n. singh, s. sharma, p. kaur, m. perbandt, c. betzel, t. p. singh
Keywords: hyluranidase, hyluronan lyase
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