Recent PDB releases or updates: week of 4 May 2007
- 1grv.pdb.
transferase 17-dec-01 1grv
Mg
Title: hypoxanthine phosphoribosyltransferase from e. coli
Author: l. w. guddat, s. vos, j. l. martin, d. t. keough, j. de jersey
Keywords: transferase, glycosyltransferase
- 1s12.pdb.
structural genomics, unknown function 05-jan-04 1s12
Title: crystal structure of tm1457
Author: d. h. shin, y. lou, j. jancarik, h. yokota, r. kim, s. -h. kim, berkeley structural genomics center (bsgc)
Keywords: structural genomics, hypothetical protein, psi, berkeley structural genomics center, bsgc, protein structure initiative
- 1umv.pdb.
lipase 28-aug-03 1umv
Ca
Title: crystal structure of an acidic, non-myotoxic phospholipase a2 from the venom of bothrops jararacussu
Author: m. t. murakami, l. watanabe, a. c. o. cintra, r. k. arni
Keywords: non-myotoxic, pla2, bothrops jararacussu, lipase
- 1w6c.pdb.
oxidoreductase 17-aug-04 1w6c
Cu Na
Title: agao holoenzyme in a small cell, at 2.2 angstroms
Author: a. p. duff, d. b. langley, g. a. juda, e. m. shepard, d. m. dooley, h. c. freeman, j. m. guss
Keywords: copper, copper containing, metal-binding, oxidoreductase, tpq, quinone, holoenzyme
- 1w6g.pdb.
oxidoreductase 18-aug-04 1w6g
Cu Na
Title: agao holoenzyme at 1.55 angstroms
Author: d. b. langley, a. p. duff, g. a. juda, e. m. shepard, d. m. dooley, h. c. freeman, j. m. guss
Keywords: amine oxidase, arthrobacter globiformis, copper, copper containing, metal-binding, oxidoreductase, tpq, quinone, holoenzyme
- 1x94.pdb.
isomerase 19-aug-04 1x94
Title: crystal structure of a hypothetical protein
Author: j. seetharaman, s. swaminathan, burley s. k. , new york structural genomix research consortium (nysgxrc)
Keywords: vibrio cholerae, structural genomics, psi, protein structure initiative, new york structural genomix research consortium, nysgxrc
- 1xxu.pdb.
oxidoreductase 08-nov-04 1xxu
Title: crystal structure of ahpe from mycrobacterium tuberculosis, a 1-cys peroxiredoxin
Author: s. li, n. a. peterson, m. y. kim, c. y. kim, l. w. hung, m. yu, t. lekin, b. w. segelke, j. s. lott, e. n. baker, tb structural genomics consortium (tbsgc)
Keywords: thioredoxin fold, structural genomics, psi, protein structure initiative, tb structural genomics consortium, tbsgc
- 1ywu.pdb.
structural genomics, unknown function 18-feb-05 1ywu
(NMR, 20 structures)
Title: solution nmr structure of pseudomonas aeruginosa protein pa4608. northeast structural genomics target pat7
Author: t. a. ramelot, a. a. yee, j. r. cort, a. semesi, c. h. arrowsmith, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: pat7, beta barrel, pilz domain, structural genomics, psi, protein structure initiative, northeast structural genomics consortium, nesg
- 2aqz.pdb.
hormone/growth factor 18-aug-05 2aqz
Title: crystal structure of fgf-1, s17t/n18t/g19 deletion mutant
Author: j. lee, m. blaber
- 2b1g.pdb.
transferase, hydrolase 15-sep-05 2b1g
K
Title: crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase
Author: l. xu, y. chong, i. hwang, a. d'onofrio, k. amore, g. p. beardsley, c. li, a. j. olson, d. l. boger, i. a. wilson
Keywords: impch, structure-base, transition state analogue, inhibitor
- 2b1i.pdb.
transferase, hydrolase 15-sep-05 2b1i
K
Title: crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase
Author: l. xu, y. chong, i. hwang, a. d'onofrio, k. amore, g. p. beardsley, c. li, a. j. olson, d. l. boger, i. a. wilson
Keywords: impch, structure-base, transition state analogue, inhibitor
- 2bsl.pdb.
oxidoreductase 11-may-05 2bsl
Mg
Title: crystal structure of l. lactis dihydroorotate dehydrogense a in complex with 3,4-dihydroxybenzoate
Author: a. e. wolfe, m. hansen, s. g. gattis, y. -c. hu, e. johansson, s. arent, s. larsen, b. a. palfey
Keywords: dihydroorotate dehydrogenase, fmn, flavoprotein, oxidoreductase, pyrimidine biosynthesis
- 2bvr.pdb.
hydrolase 24-jun-05 2bvr
Cl
Title: human thrombin complexed with fragment-based small molecules occupying the s1 pocket
Author: t. neumann, h. -d. junker, o. keil, k. burkert, h. ottleben, j. gamer, r. sekul, h. deppe, a. feurer, d. tomandl, g. metz
Keywords: serine protease, coagulation
- 2bvs.pdb.
hydrolase 04-jul-05 2bvs
Cl
Title: human thrombin complexed with fragment-based small molecules occupying the s1 pocket
Author: t. neumann, h. -d. junker, o. keil, k. burkert, h. ottleben, j. gamer, r. sekul, h. deppe, a. feurer, d. tomandl, g. metz
Keywords: serine protease, coagulation
- 2bx7.pdb.
oxidoreductase 31-may-05 2bx7
Mg
Title: crystal structure of l. lactis dihydroorotate dehydrogense a in complex with 3,5-dihydroxybenzoate
Author: a. e. wolfe, m. hansen, s. g. gattis, y. -c. hu, e. johansson, s. arent, s. larsen, b. a. palfey
Keywords: dihydroorotate dehydrogenase, oxidoreductase
- 2c8j.pdb.
lyase 05-dec-05 2c8j
Title: crystal structure of ferrochelatase hemh-1 from bacillus anthracis, str. ames
Author: a. muller, a. a. lebedev, o. v. moroz, e. v. blagova, v. m. levdikov, m. j. fogg, j. a. brannigan, a. j. wilkinson, k. s. wilson
Keywords: iron metabolism, heme biosynthesis, lyase, metal-binding, porphyrin biosynthesis
- 2cd1.pdb.
nucleic acid 19-jan-06 2cd1
(NMR, regularized mean structure)
Title: refinement of p4 stemloop structure using residual dipolar coupling data
Author: m. schmitz
Keywords: p4 stem, ribonuclease p, ribonucleic acid, ribozyme, transfer rna processing, nucleic acid
- 2cd3.pdb.
nucleic acid 19-jan-06 2cd3
(NMR, regularized mean structure)
Title: refinement of rnase p p4 stemloop structure using residual dipolar coupling data - c70u mutant
Author: m. schmitz
Keywords: metal binding site, p4 stem, ribonuclease p, ribonucleic acid, ribozyme, transfer rna processing, nucleic acid
- 2cd5.pdb.
nucleic acid 19-jan-06 2cd5
Co
(NMR, regularized mean structure)
Title: refinement of rnase p p4 stemloop structure using residual dipolar couplings - cobalt(iii) hexammine complex structure
Author: m. schmitz
Keywords: metal binding site, metal complex, p4 stem, ribonuclease p, ribonucleic acid, ribozyme, transfer rna processing, nucleic acid
- 2cd6.pdb.
nucleic acid 19-jan-06 2cd6
Co
(NMR, regularized mean structure)
Title: refinement of rnase p p4 stemloop structure using residual dipolar coupling data, c70u mutant cobalt(iii) hexammine complex
Author: m. schmitz
Keywords: cobalt (iii hexammine complex, metal binding site, metal complex, p4 stem, ribonuclease p, ribonucleic acid, ribozyme, transfer rna processing, nucleic acid
- 2cfd.pdb.
oxidoreductase 20-feb-06 2cfd
Cu Ru Na
Title: agao in complex with wc4l3 (ru-wire inhibitor, 4-carbon linker, lambda enantiomer, data set 3)
Author: d. b. langley, a. p. duff, h. c. freeman, j. m. guss, g. a. juda, d. m. dooley, s. m. contakes, n. w. halpern-manners, a. r. dunn, h. b. gray
Keywords: arthrobacter globiformis, copper, copper containing, oxidoreductase, tpq, quinone, ruthenium diimine wires, competitive inhibition, metal-binding
- 2cfg.pdb.
oxidoreductase 20-feb-06 2cfg
Cu Ru Na
Title: agao in complex with wc4d3 (ru-wire inhibitor, 4-carbon linker, delta enantiomer, data set 3)
Author: d. b. langley, a. p. duff, h. c. freeman, j. m. guss, g. a. juda, d. m. dooley, s. m. contakes, n. w. halpern-manners, a. r. dunn, h. b. gray
Keywords: arthrobacter globiformis, copper, copper containing, oxidoreductase, tpq, quinone, ruthenium diimine wires, competitive inhibition, metal-binding
- 2cfk.pdb.
oxidoreductase 21-feb-06 2cfk
Cu Ru Na
Title: agao in complex with wc5 (ru-wire inhibitor, 5-carbon linker)
Author: d. b. langley, a. p. duff, h. c. freeman, j. m. guss, g. a. juda, d. m. dooley, s. m. contakes, n. w. halpern-manners, a. r. dunn, h. b. gray
Keywords: arthrobacter globiformis, copper, copper containing, oxidoreductase, tpq, cuao, quinone, ruthenium diimine wires, competitive inhibition, metal-binding
- 2cfl.pdb.
oxidoreductase 22-feb-06 2cfl
Cu Ru Na
Title: agao in complex with wc6b (ru-wire inhibitor, 6-carbon linker, data set b)
Author: d. b. langley, a. p. duff, h. c. freeman, j. m. guss, g. a. juda, d. m. dooley, s. m. contakes, n. w. halpern-manners, a. r. dunn, h. b. gray
Keywords: arthrobacter globiformis, copper, copper containing, oxidoreductase, tpq, cuao, quinone, ruthenium diimine wires, competitive inhibition, metal-binding
- 2cfw.pdb.
oxidoreductase 24-feb-06 2cfw
Cu Ru Na
Title: agao in complex with wc7a (ru-wire inhibitor, 7-carbon linker, data set a)
Author: d. b. langley, a. p. duff, h. c. freeman, j. m. guss, g. a. juda, d. m. dooley, s. m. contakes, n. w. halpern-manners, a. r. dunn, h. b. gray
Keywords: arthrobacter globiformis, copper, copper containing, oxidoreductase, tpq, cuao, quinone, ruthenium diimine wires, competitive inhibition, metal-binding
- 2cg0.pdb.
oxidoreductase 27-feb-06 2cg0
Cu Ru Na
Title: agao in complex with wc9a (ru-wire inhibitor, 9-carbon linker, data set a)
Author: d. b. langley, a. p. duff, h. c. freeman, j. m. guss, g. a. juda, d. m. dooley, s. m. contakes, n. w. halpern-manners, a. r. dunn, h. b. gray
Keywords: arthrobacter globiformis, copper, copper containing, oxidoreductase, tpq, cuao, quinone, ruthenium diimine wires, competitive inhibition, metal-binding
- 2cg1.pdb.
oxidoreductase 27-feb-06 2cg1
Cu Ru Na
Title: agao in complex with wc11b (ru-wire inhibitor, 11-carbon linker, data set b)
Author: d. b. langley, a. p. duff, h. c. freeman, j. m. guss, g. a. juda, d. m. dooley, s. m. contakes, n. w. halpern-manners, a. r. dunn, h. b. gray
Keywords: arthrobacter globiformis, copper, copper containing, oxidoreductase, tpq, cuao, quinone, ruthenium diimine wires, competitive inhibition, metal-binding
- 2cgh.pdb.
ligase 06-mar-06 2cgh
Title: crystal structure of biotin ligase from mycobacterium tuberculosis
Author: q. ma, m. wilmanns
Keywords: mycobacterium tuberculosis, ligase
- 2cgq.pdb.
protein transport 09-mar-06 2cgq
Title: a putative acyl carrier protein(rv0033) from mycobacterium tuberculosis
Author: q. ma, m. wilmanns
Keywords: acyl carrier protein, protein transport, phosphopantetheine
- 2cgz.pdb.
lectin 10-mar-06 2cgz
Title: structure of helix pomatia agglutinin with tn antigen
Author: j. -f. sanchez, j. lescar, a. audfray, c. gautier, v. chazalet, j. gagnon, c. breton, a. imberty, e. mitchell
Keywords: snail, helix pomatia, tn antigen
- 2chc.pdb.
hypothetical protein 13-mar-06 2chc
Title: structure of rv3472(d26n), a function unknown protein from mycobacterium tuberculosis
Author: q. ma, m. wilmanns
Keywords: mycobacterium, tuberculosis, hypothetical protein
- 2cjr.pdb.
viral protein 06-apr-06 2cjr
Title: crystal structure of oligomerization domain of sars coronavirus nucleocapsid protein.
Author: c. -y. chen, c. -d. hsiao
Keywords: nucleocapsid protein, sars, coronavirus, viral protein
- 2cm4.pdb.
inhibitor 04-may-06 2cm4
Title: the complement inhibitor omci in complex with ricinoleic acid
Author: p. roversi, s. johnson, o. lissina, g. c. paesen, w. boland, m. a. nunn, s. m. lea
Keywords: c5, tick, omci, lipocalin, inhibitor, complement
- 2cm9.pdb.
inhibitor 04-may-06 2cm9
Title: the complement inhibitor omci in complex with ricinoleic acid
Author: p. roversi, s. johnson, o. lissina, g. c. paesen, w. boland, m. a. nunn, s. m. lea
Keywords: c5, tick, omci, lipocalin, inhibitor, complement
- 2cxa.pdb.
transferase 28-jun-05 2cxa
Se
Title: crystal structure of leucyl/phenylalanyl-trna protein transferase from escherichia coli
Author: m. kato-murayama, y. bessho, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: aminoacyl-trna, protein degradation, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2cxc.pdb.
transcription 28-jun-05 2cxc
Title: crystal structure of archaeal transcription termination factor nusa
Author: r. shibata, y. bessho, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: rna binding protein, archaeal nusa, kh domain, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2czh.pdb.
hydrolase 13-jul-05 2czh
Title: crystal structure of human myo-inositol monophosphatase 2 (impa2) with phosphate ion (orthorhombic form)
Author: k. ito, r. arai, t. kamo-uchikubo, t. ohnishi, h. ohba, t. yoshikawa, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: bipolar disorder, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2czi.pdb.
hydrolase 13-jul-05 2czi
Ca
Title: crystal structure of human myo-inositol monophosphatase 2 (impa2) with calcium and phosphate ions
Author: r. arai, k. ito, t. ohnishi, h. ohba, t. yoshikawa, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: bipolar disorder, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2czk.pdb.
hydrolase 13-jul-05 2czk
Title: crystal structure of human myo-inositol monophosphatase 2 (impa2) (trigonal form)
Author: r. arai, k. ito, k. hanawa-suetsugu, t. ohnishi, h. ohba, t. yoshikawa, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: bipolar disorder, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2ddk.pdb.
hydrolase 30-jan-06 2ddk
Title: crystal structure of human myo-inositol monophosphatase 2 (impa2) (orthorhombic form)
Author: r. arai, k. ito, t. kamo-uchikubo, y. bessho, h. ohba, t. ohnishi, t. yoshikawa, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: bipolar disorder, schizophrenia, febrile seizures, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2deg.pdb.
structural genomics, unknown function 10-feb-06 2deg
Mn Na
Title: crystal structure of tt0972 protein form thermus thermophilus with mn2(+) ions
Author: e. inagaki, n. nakano, a. shinkai, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: flavin, manganese ion, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2deh.pdb.
structural genomics, unknown function 10-feb-06 2deh
Cl Na
Title: crystal structure of tt0972 protein form thermus thermophilus with cl(-) ions
Author: e. inagaki, n. nakano, a. shinkai, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: flavin, chloride ion, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dei.pdb.
transferase 10-feb-06 2dei
Mg
Title: crystal structure of galaktokinase from pyrococcus horikoshii with amp-pnp and galactose
Author: e. inagaki, k. sakamoto, a. shinkai, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: atp analogue, galactose, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dej.pdb.
transferase 10-feb-06 2dej
Mg
Title: crystal structure of galaktokinase from pyrococcus horikoshii with amp-pn and galactose
Author: e. inagaki, k. sakamoto, a. shinkai, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: adp analogue, galactose, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dev.pdb.
structural genomics, unknown function 17-feb-06 2dev
Cl Cs Na
Title: crystal structure of tt0972 protein from thermus thermophilus with cs(+) ions
Author: e. inagaki, n. nakano, a. shinkai, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: flavin, cesium ion, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dks.pdb.
cell adhesion 14-apr-06 2dks
(NMR, 20 structures)
Title: solution structure of the first ig-like domain of human carcinoembryonic antigen related cell adhesion molecule 8
Author: k. nagashima, f. hayashi, m. yoshida, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dkv.pdb.
hydrolase 14-apr-06 2dkv
Title: crystal structure of class i chitinase from oryza sativa l. japonica
Author: y. kezuka, y. nishizawa, t. watanabe, t. nonaka
Keywords: whole structure, oryza sativa l. japonica
- 2dok.pdb.
unknown function 01-may-06 2dok
Title: crystal structure of the pin domain of human est1a
Author: d. takeshita
- 2dtj.pdb.
transferase 12-jul-06 2dtj
Title: crystal structure of regulatory subunit of aspartate kinase from corynebacterium glutamicum
Author: a. yoshida, t. tomita, s. fushinobu, t. kuzuyama, m. nishiyama
Keywords: regulatory subunit
- 2e0g.pdb.
replication 07-oct-06 2e0g
(NMR, 25 structures)
Title: dnaa n-terminal domain
Author: y. abe, t. katayama, t. ueda, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2e1h.pdb.
ligase 25-oct-06 2e1h
Title: crystal structure of biotin protein ligase from pyrococcus horikoshii ot3, k111g mutation
Author: b. bagautdinov, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
Keywords: dimer, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2e1p.pdb.
hydrolase 27-oct-06 2e1p
Ca
Title: crystal structure of pro-tk-subtilisin
Author: s. tanaka, k. saito, h. chon, h. matsumura, y. koga, k. takano, s. kanaya
Keywords: serine protease, precursor
- 2e4l.pdb.
hydrolase 13-dec-06 2e4l
Title: thermodynamic and structural analysis of thermolabile rnase hi from shewanella oneidensis mr-1
Author: t. tadokoro, d. -j. you, h. chon, h. matsumura, y. koga, k. takano, s. kanaya
Keywords: endoribonuclease, rnase hi, shewanella oneidensis mr-1
- 2efj.pdb.
transferase 22-feb-07 2efj
Title: the structure of 1,7 dimethylxanthine methyltransferase
Author: a. a. mccarthy, j. g. mccarthy
Keywords: sah, theobromine
- 2eg5.pdb.
transferase 28-feb-07 2eg5
Title: the structure of xanthosine methyltransferase
Author: a. a. mccarthy, j. g. mccarthy
Keywords: xanthosine, sah
- 2ego.pdb.
protein binding 01-mar-07 2ego
Title: crystal structure of tamalin pdz domain
Author: t. sugi, t. oyama, t. muto, s. nakanishi, k. morikawa, h. jingami
Keywords: ligand-free
- 2ehh.pdb.
lyase 06-mar-07 2ehh
Title: crystal structure of dihydrodipicolinate synthase from aquifex aeolicus
Author: t. s. kumarevel, p. karthe, s. kuramitsu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: aquifex aeolicus, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2ehq.pdb.
oxidoreductase 07-mar-07 2ehq
Na
Title: crystal analysis of 1-pyrroline-5-carboxylate dehydrogenase from thermus with bound nadp
Author: e. inagaki, k. sakamoto, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2eph.pdb.
lyase 30-mar-07 2eph
Title: crystal structure of fructose-bisphosphate aldolase from plasmodium falciparum in complex with trap-tail determined at 2.7 angstrom resolution
Author: j. bosch, c. a. buscaglia, b. krumm, t. cardozo, v. nussenzweig, w. g. j. hol, structural genomics of pathogenic protozoa consortium (sgpp)
Keywords: invasion machinery, plasmodium falciparum, structural genomics, psi, protein structure initiative, structural genomics of pathogenic protozoa consortium, sgpp
- 2fkx.pdb.
structural protein 05-jan-06 2fkx
(NMR, 18 structures)
Title: ribosomal protein s15 from thermus thermophilus, nmr recalculated structure
Author: t. e. malliavin
Keywords: rna-binding protein, rrna-binding protein
- 2fnk.pdb.
lyase 11-jan-06 2fnk
Zn
Title: activation of human carbonic anhydrase ii by exogenous proton donors
Author: d. bhatt, s. z. fisher, c. tu, r. mckenna, d. n. silverman
Keywords: proton transfer, exogenous proton donor
- 2fnm.pdb.
lyase 11-jan-06 2fnm
Zn
Title: activation of human carbonic anhdyrase ii by exogenous proton donors
Author: d. bhatt, s. z. fisher, c. tu, r. mckenna, d. n. silverman
Keywords: proton transfer, exogenous proton donor
- 2fnn.pdb.
lyase 11-jan-06 2fnn
Zn
Title: activation of human carbonic anhydrase ii by exogenous proton donors
Author: d. bhatt, s. z. fisher, c. tu, r. mckenna, d. n. silverman
Keywords: proton transfer, exogenous proton donor
- 2fq6.pdb.
lyase 17-jan-06 2fq6
F
Title: cystathionine beta-lyase (cbl) from escherichia coli in complex with n-hydrazinocarbonylmethyl-2-trifluoromethyl- benzamide
Author: m. s. junop
Keywords: plp cofactor covalently bound to p3f inhibitor
- 2fsu.pdb.
structural genomics, unknown function 23-jan-06 2fsu
Na Se
Title: crystal structure of the phnh protein from escherichia coli
Author: m. a. adams, y. luo, d. zechel, z. jia, montreal-kingston bacterial structural genomics initiative (bsgi)
Keywords: phnh, phosphonate metabolism, structural genomics, montreal-kingston bacterial structural genomics initiative, bsgi
- 2g78.pdb.
transport protein 27-feb-06 2g78
Na
Title: crystal structure of the r132k:y134f mutant of cellular retinoic acid binding protein type ii in complex with all- trans-retinoic acid at 1.70 angstroms resolution
Author: s. vaezeslami, j. h. geiger
Keywords: retinoic acid, retinoids, beta barrel, crystallography, x-ray, high resolution
- 2g79.pdb.
transport protein 27-feb-06 2g79
Na
Title: crystal structure of the r132k:y134f mutant of cellular retinoic acid binding protein type ii in complex with all- trans-retinal at 1.69 angstroms resolution
Author: s. vaezeslami, j. h. geiger
Keywords: retinoic acid, retinoids, beta barrel, crystallography, x-ray, high resolution, retinal
- 2g7b.pdb.
transport protein 27-feb-06 2g7b
Na
Title: crystal structure of the r132k:r111l:l121e mutant of cellular retinoic acid binding protein type ii in complex with all-trans-retinal at 1.18 angstroms resolution
Author: s. vaezeslami, j. h. geiger
Keywords: retinoic acid, retinoids, beta barrel, crystallography, x-ray, high resolution, schiff base, protonated schiff base, retinal
- 2gb9.pdb.
deoxyribonucleic acid 10-mar-06 2gb9
Sr
Title: d(cgtacg)2 crosslinked bis-acridine complex
Author: n. h. hopcroft, a. l. brogden, m. searcey, c. j. cardin
- 2gko.pdb.
hydrolase 03-apr-06 2gko
Na Ca
Title: s41 psychrophilic protease
Author: r. l. walter, m. j. mekel, r. a. grayling, f. h. arnold, p. l. wintrode, o. almog
- 2gsb.pdb.
signaling protein 26-apr-06 2gsb
(NMR, 20 structures)
Title: solution structure of the second sh2 domain of human ras gtpase-activating protein 1
Author: c. kurosaki, t. suetake, m. yoshida, f. hayashi, s. yokoyma, riken structural genomics/proteomics initiative (rsgi)
Keywords: gap, ras p21 protein activator, p120gap, rasgap, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2gt1.pdb.
transferase 27-apr-06 2gt1
Title: e. coli heptosyltransferase waac.
Author: s. grizot, m. salem, v. vongsouthi, l. durand, f. moreau, h. dohi, s. vincent, s. escaich, a. ducruix
- 2gu8.pdb.
signaling protein,transferase/inhibitor 28-apr-06 2gu8
Cl
Title: discovery of 2-pyrimidyl-5-amidothiophenes as novel and potent inhibitors for akt: synthesis and sar studies
Author: j. m. murray
Keywords: pka, akt, kinase, drug design, ternary complex
- 2gxb.pdb.
hydrolase/rna 08-may-06 2gxb
Na
Title: crystal structure of the za domain bound to z-rna
Author: a. athanasiadis, d. placido, a. rich
Keywords: za, adar1, rna editing, protein-rna complex
- 2h27.pdb.
transferase/dna 18-may-06 2h27
Title: crystal structure of escherichia coli sigmae region 4 bound to its-35 element dna
Author: w. j. lane, s. a. darst
Keywords: helix-turn-helix, double helix
- 2h9z.pdb.
structural genomics, unknown function 12-jun-06 2h9z
(NMR, 20 structures)
Title: solution structure of hypothetical protein, hp0495 from helicobacter pylori
Author: m. d. seo, s. j. park, h. j. kim, b. j. lee
- 2hbh.pdb.
gene regulation 14-jun-06 2hbh
Title: crystal structure of vitamin d nuclear receptor ligand binding domain bound to a locked side-chain analog of calcitriol and src-1 peptide
Author: n. rochel, s. hourai, d. moras
- 2hc4.pdb.
gene regulation 15-jun-06 2hc4
Title: crystal structure of the lbd of vdr of danio rerio in complex with calcitriol
Author: f. ciesielski, n. rochel, d. moras
- 2hcd.pdb.
gene regulation 16-jun-06 2hcd
Title: crystal structure of the ligand binding domain of the vitamin d nuclear receptor in complex with gemini and a coactivator peptide
Author: f. ciesielski, n. rochel, d. moras
- 2hch.pdb.
chaperone 16-jun-06 2hch
Title: n-domain of grp94 in complex with the novel ligand n-(2- amino)ethyl carboxyamido adenosine
Author: r. m. immormino, d. t. gewirth
Keywords: hsp82, hsp90, htpg, chaperone, ligand, neca, npca, neaca, neoca, adenosine
- 2hdm.pdb.
cytokine 20-jun-06 2hdm
(NMR, 20 structures)
Title: solution structure of v21c/v59c lymphotactin/xcl1
Author: b. f. volkman, r. l. tuinstra, f. c. peterson, e. s. elgin
Keywords: xcl1, chemokine, nmr, conformational restriction
- 2hf5.pdb.
metal binding protein 23-jun-06 2hf5
Ca
(NMR, 20 structures)
Title: the structure and function of a novel two-site calcium- binding fragment of calmodulin
Author: t. m. lakowski, g. m. lee, r. e. reid, l. p. mcintosh
Keywords: calcium-binding, ef-hand, calmodulin, hlh
- 2hi8.pdb.
hydrolase activator, protein binding 29-jun-06 2hi8
Cl Br Ca
Title: human formylglycine generating enzyme, c336s mutant, bromide co-crystallization
Author: m. g. rudolph, d. roeser
Keywords: protein binding, formylglycin generation, post-translational modification, endoplasmic reticulum, sulfatase
- 2hib.pdb.
hydrolase activator, protein binding 29-jun-06 2hib
I Ca
Title: human formylglycine generating enzyme, c336s mutant, iodide co-crystallization
Author: m. g. rudolph, d. roeser
Keywords: protein binding, formylglycine, post- translational modification, endoplasmic reticulum, sulfatase
- 2hql.pdb.
dna binding protein 18-jul-06 2hql
Title: crystal structure of a small single-stranded dna binding protein from mycoplasma pneumoniae
Author: d. das, berkeley structural genomics center (bsgc)
Keywords: berkeley structural genomics center, bsgc
- 2hqv.pdb.
structural genomics, unknown function 19-jul-06 2hqv
Se
Title: x-ray crystal structure of protein agr_c_4470 from agrobacterium tumefaciens. northeast structural genomics consortium target atr92.
Author: s. m. vorobiev, h. neely, j. seetharaman, l. zhao, k. cunningham, l. c. ma, y. fang, r. xiao, t. acton, t. g. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: atr92, agr_c_4470, q7cx01_agrt5, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
- 2hrq.pdb.
hydrolase 20-jul-06 2hrq
Title: crystal structure of human liver carboxylesterase 1 (hce1) in covalent complex with the nerve agent soman (gd)
Author: c. d. fleming, m. r. redinbo
Keywords: carboxylesterase, soman
- 2hrr.pdb.
hydrolase 20-jul-06 2hrr
Title: crystal structure of human liver carboxylesterase 1 (hce1) in covalent complex with the nerve agent tabun (ga)
Author: c. d. fleming, m. r. redinbo
Keywords: carboxylesterase, tabun
- 2hxw.pdb.
periplasmic binding protein 04-aug-06 2hxw
Se
Title: crystal structure of peb3 from campylobacter jejuni
Author: e. s. rangarajan, s. bhatia, d. c. watson, c. munger, m. cygler, a. matte, n. m. young, montreal-kingston bacterial structural genomics initiative (bsgi)
Keywords: periplasmic binding protein, n-glycosylation, structural genomics, montreal-kingston bacterial structural genomics initiative, bsgi
- 2hzy.pdb.
hydrolase 09-aug-06 2hzy
Mn Na Ni Ca
Title: mouse fumarylacetoacetate hydrolase complexes with a transition-state mimic of the complete substrate
Author: t. d. hurley, d. e. timm
- 2i6w.pdb.
transport protein 29-aug-06 2i6w
Title: crystal structure of the multidrug efflux transporter acrb
Author: d. das, q. s. xu, s. h. kim
Keywords: multidrug efflux transporter, acrb
- 2i9f.pdb.
viral protein 05-sep-06 2i9f
Cl Na Se
Title: structure of the equine arterivirus nucleocapsid protein
Author: a. deshpande, s. wang, m. walsh, t. dokland
Keywords: capsid, structure, crystallography, assembly
- 2i9s.pdb.
chaperone 06-sep-06 2i9s
(NMR, 20 structures)
Title: the solution structure of the core of mesoderm development (mesd).
Author: c. koehler, o. andersen, a. diehl, p. schmieder, g. krause, h. oschkinat
- 2id4.pdb.
hydrolase 14-sep-06 2id4
Na Ca
Title: the 1.9 a structure of kex2 in complex with an ac-r-e-r-k- chloromethyl ketone inhibitor.
Author: j. l. wheatley, t. holyoak
Keywords: kexin, furin, proprotein, prohormone, convertase, subtilisin like protease, serine protease
- 2idj.pdb.
transferase 15-sep-06 2idj
Ca
Title: crystal structure of rat glycine n-methyltransferase apoprotein, monoclinic form
Author: z. luka, s. pakhomova, l. v. loukachevitch, m. egli, m. e. newcomer, c. wagner
Keywords: rat, apoprotein.
- 2idk.pdb.
transferase 15-sep-06 2idk
Title: crystal structure of rat glycine n-methyltransferase complexed with folate
Author: z. luka, s. pakhomova, l. v. loukachevitch, m. egli, m. e. newcomer, c. wagner
Keywords: rat, folate binding
- 2iey.pdb.
signaling protein 19-sep-06 2iey
Se
Title: crystal structure of mouse rab27b bound to gdp in hexagonal space group
Author: l. m. g. chavas, s. torii, h. kamikubo, m. kawasaki, k. ihara, r. kato, m. kataoka, t. izumi, s. wakatsuki
Keywords: gtpase, rab, signaling protein, gdp, swapping
- 2iez.pdb.
signaling protein 19-sep-06 2iez
Ca
Title: crystal structure of mouse rab27b bound to gdp in monoclinic space group
Author: l. m. g. chavas, s. torii, h. kamikubo, m. kawasaki, k. ihara, r. kato, m. kataoka, t. izumi, s. wakatsuki
Keywords: gtpase, rab, signaling protein, gdp, swapping
- 2if0.pdb.
signaling protein 19-sep-06 2if0
Mg
Title: crystal structure of mouse rab27b bound to gdp in monoclinic space group
Author: l. m. g. chavas, s. torii, h. kamikubo, m. kawasaki, k. ihara, r. kato, m. kataoka, t. izumi, s. wakatsuki
Keywords: gtpase, rab, signaling protein, gdp, swapping
- 2ikg.pdb.
oxidoreductase 02-oct-06 2ikg
Title: aldose reductase complexed with nitrophenyl-oxadiazol type inhibitor at 1.43 a
Author: h. steuber, c. koch, a. heine, g. klebe
Keywords: inhibitor complex, aldose reductase
- 2ikh.pdb.
oxidoreductase 02-oct-06 2ikh
Title: human aldose reductase complexed with nitrofuryl-oxadiazol inhibitor at 1.55 a
Author: h. steuber, c. koch, a. heine, g. klebe
Keywords: inhibitor complex
- 2iki.pdb.
oxidoreductase 02-oct-06 2iki
Cl F Br
Title: human aldose reductase complexed with halogenated idd-type inhibitor
Author: h. steuber, c. koch, a. heine, g. klebe
- 2ikj.pdb.
oxidoreductase 02-oct-06 2ikj
Cl
Title: human aldose reductase complexed with nitro-substituted idd- type inhibitor
Author: h. steuber, c. koch, a. heine, g. klebe
- 2imz.pdb.
hydrolase 05-oct-06 2imz
Zn
Title: crystal structure of mtu reca intein splicing domain
Author: p. van roey
- 2in0.pdb.
hydrolase 05-oct-06 2in0
Title: crystal structure of mtu reca intein splicing domain
Author: p. van roey
- 2in8.pdb.
hydrolase 06-oct-06 2in8
Title: crystal structure of mtu reca intein, splicing domain
Author: p. van roey
- 2in9.pdb.
hydrolase 06-oct-06 2in9
Title: crystal structure of mtu reca intein, splicing domain
Author: p. van roey
- 2ipc.pdb.
transport protein 12-oct-06 2ipc
Title: crystal structure of the translocation atpase seca from thermus thermophilus reveals a parallel, head-to-head dimer
Author: d. g. vassylyev, h. mori, m. n. vassylyeva, t. tsukazaki, y. kimura, t. h. tahirov, k. ito, riken structural genomics/proteomics initiative (rsgi)
Keywords: atpase, parallel dimer, structural genomics, riken structural genomics/proteomics initiative, rsgi
- 2iwn.pdb.
signalling protein 03-jul-06 2iwn
Title: 3rd pdz domain of multiple pdz domain protein mpdz (casp target)
Author: j. m. elkins, c. gileadi, p. savitsky, g. berridge, c. e. a. smee, a. c. w. pike, e. papagrigoriou, m. sundstrom, a. edwards, c. arrowsmith, j. weigelt, d. a. doyle
Keywords: pdz, mpdz, mupp1, mupp- 1, pdz domain, host-virus interaction, structural genomics consortium, synaptosome, tight junction, alternative splicing, signalling protein
- 2iwp.pdb.
signaling protein 03-jun-06 2iwp
Title: 12th pdz domain of multiple pdz domain protein mpdz (casp target)
Author: j. m. elkins, x. yang, c. gileadi, g. schoch, c. johansson, p. savitsky, g. berridge, c. e. a. smee, a. turnbull, a. pike, e. papagrigoriou, m. sundstrom, a. edwards, c. arrowsmith, j. weigelt, d. a. doyle
Keywords: pdz, mpdz, mupp1, mupp-1, membrane, pdz domain, host-virus interaction, structural genomics consortium, synaptosome, tight junction, alternative splicing, signaling protein
- 2iwq.pdb.
signaling protein 03-jul-06 2iwq
Title: 7th pdz domain of multiple pdz domain protein mpdz
Author: j. m. elkins, g. berridge, p. savitsky, c. e. a. smee, a. turnbull, e. ugochukwu, e. papagrigoriou, m. sundstrom, a. edwards, c. arrowsmith, j. weigelt, d. a. doyle
Keywords: pdz, mpdz, mupp1, mupp- 1, membrane, pdz domain, host-virus interaction, structural genomics consortium, synaptosome, tight junction, alternative splicing, signaling protein
- 2j07.pdb.
lyase 01-aug-06 2j07
Cl
Title: thermus dna photolyase with 8-hdf antenna chromophore
Author: t. klar, g. kaiser, u. hennecke, t. carell, a. batschauer, l. -o. essen
Keywords: dna binding protein, flavoprotein, nucleotide-binding, antenna chromophore, photoreactivating enzyme, cyclobutane pyrimidine dimer (cpd), fad, 8-hdf, lyase, plasmid, dna damage, dna repair
- 2j08.pdb.
lyase 01-aug-06 2j08
Cl I
Title: thermus dna photolyase with 8-iod-riboflavin antenna chromophore
Author: t. klar, g. kaiser, u. hennecke, t. carell, a. batschauer, l. -o. essen
Keywords: dna binding protein, flavoprotein, fad, lyase, 8-irf, plasmid, dna damage, dna repair, nucleotide-binding, antenna chromophore, photoreactivating enzyme, cyclobutane pyrimidine dimer (cpd)
- 2j09.pdb.
lyase 01-aug-06 2j09
Cl
Title: thermus dna photolyase with fmn antenna chromophore
Author: t. klar, g. kaiser, u. hennecke, t. carell, a. batschauer, l. -o. essen
Keywords: dna-binding, flavoprotein, nucleotide-binding, antenna chromophore, photoreactivating enzyme, fmn, fad, lyase, plasmid, dna damage, dna repair, cyclobutane pyrimidine dimer (cpd)
- 2jes.pdb.
viral protein 21-jan-07 2jes
Hg Ca
Title: portal protein from bacteriophage spp1
Author: a. a. lebedev, m. h. krause, a. l. isidro, a. a. vagin, e. v. orlova, j. turner, e. j. dodson, p. tavares, a. a. antson
Keywords: dna translocation, molecular motor, viral portal protein, viral protein
- 2jfb.pdb.
transferase 30-jan-07 2jfb
Title: 3d structure of lumazine synthase from candida albicans
Author: e. morgunova, m. fischer, m. cushman, a. bacher, r. ladenstein
Keywords: candida albicans, lumazine synthase, riboflavin biosynthesis
- 2jg2.pdb.
transferase 07-feb-07 2jg2
Mg
Title: high resolution structure of spt with plp internal aldimine
Author: b. a. yard, l. g. carter, k. a. johnson, i. overton, s. a. mcmahon, m. dorward, h. liu, d. puech, m. oke, g. barton, j. h. naismith, d. j. campopiano
Keywords: plp, sspf, transferase, sphingolipid, pyridoxal phosphate, serine palmitoyl transferase
- 2jgt.pdb.
transferase 14-feb-07 2jgt
Title: high resolution structure of spt with plp internal aldimine
Author: b. a. yard, l. g. carter, k. a. johnson, i. overton, s. a. mcmahon, m. dorward, h. liu, d. puech, m. oke, g. barton, j. h. naismith, d. j. campopiano
Keywords: plp, sspf, transferase, sphingolipid, pyridoxal phosphate, serine palmitoyl transferase
- 2ji1.pdb.
oxidoreductase 24-feb-07 2ji1
Fe Ca
Title: x-ray structure of wild-type superoxide reductase from desulfoarculus baarsii
Author: g. katona, p. carpentier, v. niviere, p. amara, v. adam, j. ohana, n. tsanov, d. bourgeois
Keywords: superoxide reductase, intermediate trapping, microspectrophotometry, detoxification, oxidoreductase, electron transport, iron, transport, redox states, metal-binding
- 2ji2.pdb.
oxidoreductase 24-feb-07 2ji2
Fe Ca
Title: x-ray structure of e114a mutant of superoxide reductase from desulfoarculus baarsii in the native, reduced form
Author: g. katona, p. carpentier, v. niviere, p. amara, v. adam, j. ohana, n. tsanov, d. bourgeois
Keywords: superoxide reductase, intermediate trapping, microspectrophotometry, detoxification, oxidoreductase, electron transport, iron, transport, redox states, metal-binding
- 2ji3.pdb.
oxidoreductase 24-feb-07 2ji3
Fe Ca
Title: x-ray structure of the iron-peroxide intermediate of superoxide reductase (e114a mutant) from desulfoarculus baarsii
Author: g. katona, p. carpentier, v. niviere, p. amara, v. adam, j. ohana, n. tsanov, d. bourgeois
Keywords: superoxide reductase, intermediate trapping, microspectrophotometry, detoxification, oxidoreductase, electron transport, iron, transport, redox states, metal-binding
- 2jn0.pdb.
membrane protein 15-dec-06 2jn0
(NMR, 20 structures)
Title: solution nmr structure of the ygdr protein from escherichia coli. northeast structural genomics target er382a.
Author: p. rossi, c. x. chen, m. jiang, k. cunningham, l. ma, r. xiao, j. c. liu, m. baran, g. v. t. swapna, t. b. acton, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: hypothetical lipoprotein, psi-2 target, structural genomics, protein structure initiative, northeast structural genomics consortium, nesg
- 2jn9.pdb.
structural genomics, unknown function 29-dec-06 2jn9
(NMR, 10 structures)
Title: nmr solution structure of ykvr protein from bacillus subtilis: nesg target sr358
Author: s. v. t. gurla, j. m. aramini, k. chi ho, k. cunningham, l. -c. ma, r. xiao, m. c. baran, t. b. acton, j. liu, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: sr358, bacillus subtilis, nesg, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
- 2nra.pdb.
replication/dna 01-nov-06 2nra
Title: crystal structure of pi initiator protein in complex with iteron dna
Author: m. k. swan, d. bastia, c. davies
Keywords: dna replication
- 2nru.pdb.
transferase 02-nov-06 2nru
Title: crystal structure of irak-4
Author: z. wang, j. liu, n. p. c. walker
Keywords: inhibitor, irak
- 2nry.pdb.
transferase 02-nov-06 2nry
Title: crystal structure of irak-4
Author: z. wang, j. liu, n. p. c. walker
Keywords: inhibitor, staurosporine
- 2nsh.pdb.
lyase 04-nov-06 2nsh
Title: e. coli pure h45q mutant complexed with nitro-air
Author: s. e. ealick, m. morar
Keywords: kinked c- terminal helix
- 2nsj.pdb.
lyase 04-nov-06 2nsj
Title: e. coli pure h45q mutant complexed with cair
Author: s. e. ealick, m. morar
Keywords: kinked c- terminal helix
- 2nsu.pdb.
metal transport 06-nov-06 2nsu
(cryo-electron microscopy)
Title: crystal structure of the ectodomain of human transferrin receptor fitted into a cryo-em reconstruction of canine parvovirus and feline transferrin receptor complex
Author: s. hafenstein, v. a. kostyuchenko, m. g. rossmann
Keywords: virus-receptor complex
- 2nt8.pdb.
transferase 07-nov-06 2nt8
Mg
Title: atp bound at the active site of a pduo type atp:co(i) rrinoid adenosyltransferase from lactobacillus reuteri
Author: m. st-maurice, p. e. mera, m. p. taranto, f. sesma, j. c. escalante- semerena, i. rayment
- 2nyc.pdb.
protein binding 20-nov-06 2nyc
Title: crystal structure of the bateman2 domain of yeast snf4
Author: m. j. rudolph, g. a. amodeo, s. iram, s. hong, g. pirino, m. carlson, l. tong
Keywords: snf4, amp kinase
- 2nye.pdb.
protein binding 20-nov-06 2nye
Se
Title: crystal structure of the bateman2 domain of yeast snf4
Author: m. j. rudolph, g. a. amodeo, s. iram, s. hong, g. pirino, m. carlson, l. tong
Keywords: amp kinase, snf4
- 2nzu.pdb.
transcription 25-nov-06 2nzu
Title: structural mechanism for the fine-tuning of ccpa function by the small molecule effectors g6p and fbp
Author: m. a. schumacher, w. hillen, r. g. brennan
Keywords: ccr, hpr-ser46-p, glucose-6-phosphate, adjunct corepressor, laci-galr
- 2nzv.pdb.
transcription 25-nov-06 2nzv
Title: structural mechanism for the fine-tuning of ccpa function by the small molecule effectors g6p and fbp
Author: m. a. schumacher, w. hillen, r. g. brennan
Keywords: hprser46-p, ccr, fructose-bis-phosphate, adjunct corepressor, laci-galr
- 2o3z.pdb.
hydrolase 02-dec-06 2o3z
Cl Zn
Title: x-ray crystal structure of lpxc complexed with 3- heptyloxybenzoate
Author: h. a. gennadios, d. a. whittington, d. w. christianson
Keywords: lipid synthesis, lpxc, 3- heptyloxybenzoate
- 2o6a.pdb.
metal binding protein 07-dec-06 2o6a
Fe
Title: crystal structure of the haemophilus influenzae e57a mutant fbpa
Author: s. r. shouldice, l. w. tari
Keywords: iron binding
- 2o6c.pdb.
membrane protein, protein binding 07-dec-06 2o6c
Cl Se
Title: structure of selenomethionyl rtp34 from treponema pallidum
Author: m. machius, c. a. brautigam, r. k. deka, d. r. tomchick, s. b. lumpkins, m. v. norgard
Keywords: syphilis, metal-ion binding, dimer
- 2o6d.pdb.
membrane protein, protein binding 07-dec-06 2o6d
Cl Zn
Title: structure of native rtp34 from treponema pallidum
Author: m. machius, c. a. brautigam, r. k. deka, d. r. tomchick, s. b. lumpkins, m. v. norgard
Keywords: syphilis, metal-ion binding, dimer
- 2o6e.pdb.
membrane protein, protein binding 07-dec-06 2o6e
Cl Zn
Title: structure of native rtp34 from treponema pallidum from zinc- soaked crystals
Author: m. machius, c. a. brautigam, r. k. deka, d. r. tomchick, s. b. lumpkins, m. v. norgard
Keywords: syphilis, metal-ion binding, dimer
- 2o6f.pdb.
membrane protein, protein binding 07-dec-06 2o6f
Cl
Title: structure of metal- free rtp34 from treponema pallidum
Author: m. machius, c. a. brautigam, r. k. deka, d. r. tomchick, s. b. lumpkins, m. v. norgard
Keywords: syphilis, metal-ion binding, dimer
- 2o6l.pdb.
transferase 07-dec-06 2o6l
Se
Title: crystal structure of the udp-glucuronic acid binding domain of the human drug metabolizing udp-glucuronosyltransferase 2b7
Author: m. j. miley, m. r. redinbo
Keywords: rossman, mad, enzyme, nucleotide binding, sugar,udp-glucuronosyltransferase, ugt
- 2o88.pdb.
signaling protein 12-dec-06 2o88
Title: crystal structure of the n114a mutant of abl-sh3 domain complexed with a designed high-affinity peptide ligand: implications for sh3-ligand interactions
Author: a. camara-artigas
- 2oae.pdb.
hydrolase 15-dec-06 2oae
Title: crystal structure of rat dipeptidyl peptidase (dppiv) with thiazole-based peptide mimetic #31
Author: k. l. longenecker, q. shuai, j. patel, p. wiedeman
Keywords: inhibitor complex
- 2oan.pdb.
structural protein 16-dec-06 2oan
Ca
Title: structure of oxidized beta-actin
Author: f. schmitzberger, i. lassing, p. nordlund, u. lindberg
Keywords: cysteine covalently modified by oxidation
- 2oay.pdb.
immune system,hydrolase inhibitor 18-dec-06 2oay
Title: crystal structure of latent human c1-inhibitor
Author: v. harmat, l. beinrohr, p. gal, j. dobo
- 2od8.pdb.
protein binding 21-dec-06 2od8
Title: structure of a peptide derived from cdc9 bound to pcna
Author: b. r. chapados, j. a. tainer
Keywords: pcna-peptide complex, pcna
- 2odr.pdb.
ligase 26-dec-06 2odr
Title: methanococcus maripaludis phosphoseryl-trna synthetase
Author: t. a. steitz, s. kamtekar
- 2oef.pdb.
transferase 29-dec-06 2oef
Se
Title: open and closed structures of the udp-glucose pyrophosphorylase from leishmania major
Author: t. steiner
Keywords: beta-helix, pyrophosphorylase
- 2oeg.pdb.
transferase 29-dec-06 2oeg
Se
Title: open and closed structures of the udp-glucose pyrophosphorylase from leishmania major
Author: t. steiner
Keywords: beta-helix, pyrophosphorylase
- 2oen.pdb.
transcription 30-dec-06 2oen
Title: structural mechanism for the fine-tuning of ccpa function by the small molecule effectors glucose-6-phosphate and fructose-1,6-bisphosphate
Author: m. a. schumacher, g. seidel, w. hillen, r. g. brennan
Keywords: ccr, hpr, crh, protein-dna, adjunct corepressor
- 2oey.pdb.
deoxyribonucleic acid 01-jan-07 2oey
Ho
(NMR, 8 structures)
Title: solution structure of a designed spirocyclic helical ligand binding at a two-base bulge site in dna
Author: n. zhang, y. lin, z. xiao, g. b. jones, i. h. goldberg
- 2of0.pdb.
hydrolase 02-jan-07 2of0
I
Title: x-ray crystal structure of beta secretase complexed with compound 5
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2of3.pdb.
structural protein, cell cycle 02-jan-07 2of3
Title: tog domain structure from c.elegans zyg9
Author: j. al-bassam, n. a. larsen, a. a. hyman, s. c. harrison
Keywords: kinetochore, microtubule, xmap215, zyg9, stu2, dis1, microtubule associated protein
- 2ofc.pdb.
sugar binding protein 03-jan-07 2ofc
Title: the crystal structure of sclerotium rolfsii lectin
Author: d. d. leonidas, s. e. zographos, n. g. oikonomakos
Keywords: dual specificity
- 2ofd.pdb.
sugar binding protein 03-jan-07 2ofd
Title: the crystal structure of sclerotium rolfsii lectin in complex with n-acetyl-d-galactosamine
Author: d. d. leonidas, s. e. zographos, n. g. oikonomakos
Keywords: dual specificity
- 2ofe.pdb.
sugar binding protein 03-jan-07 2ofe
Title: the crystal structure of sclerotium rolfsii lectin in complex with n-acetyl-d-glucosamine
Author: d. d. leonidas, s. e. zographos, n. g. oikonomakos
Keywords: dual specificity
- 2ogm.pdb.
ribosome 07-jan-07 2ogm
Title: the crystal structure of the large ribosomal subunit from deinococcus radiodurans complexed with the pleuromutilin derivative sb-571519
Author: c. davidovich, a. bashan, t. auerbach-nevo, a. yonath
Keywords: pleuromutilin, ptc, peptidyl transferase center, ribosome, antibiotic
- 2ogn.pdb.
ribosome 07-jan-07 2ogn
Title: the crystal structure of the large ribosomal subunit from deinococcus radiodurans complexed with the pleuromutilin derivative sb-280080
Author: c. davidovich, a. bashan, t. auerbach-nevo, a. yonath
Keywords: pleuromutilin, ptc, peptidyl transferase center, ribosome, antibiotic
- 2ogo.pdb.
ribosome 07-jan-07 2ogo
Title: the crystal structure of the large ribosomal subunit from deinococcus radiodurans complexed with the pleuromutilin derivative retapamulin (sb-275833)
Author: c. davidovich, a. bashan, t. auerbach-nevo, a. yonath
Keywords: sb-275833, pleuromutilin, ptc, peptidyl transferase center, ribosome, antibiotic
- 2ogu.pdb.
metal binding protein 08-jan-07 2ogu
Title: crystal structure of the isolated mthk rck domain
Author: m. m. c. kuo, k. a. baker, l. wong, s. choe
Keywords: rck, ktn
- 2ogv.pdb.
transferase 09-jan-07 2ogv
Title: crystal structure of the autoinhibited human c-fms kinase domain
Author: m. walter, i. s. lucet, o. patel, s. e. broughton, r. bamert, n. k. williams, e. fantino, a. f. wilks, j. rossjohn
Keywords: macrophage colony stimulating factor receptor
- 2ohk.pdb.
hydrolase 10-jan-07 2ohk
I
Title: x-ray crystal structure of beta secretase complexed with 1- amino-isoquinoline
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2ohl.pdb.
hydrolase 10-jan-07 2ohl
I
Title: x-ray crystal structure of beta secretase complexed with 2- aminoquinoline
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2ohm.pdb.
hydrolase 10-jan-07 2ohm
I
Title: x-ray crystal structure of beta secretase complexed with n~3~-benzylpyridine-2,3-diamine
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2ohn.pdb.
hydrolase 10-jan-07 2ohn
F I
Title: x-ray crystal structure of beta secretase complexed with 4- (4-fluorobenzyl)piperidine
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2ohp.pdb.
hydrolase 10-jan-07 2ohp
I
Title: x-ray crystal structure of beta secretase complexed with compound 3
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2ohq.pdb.
hydrolase 10-jan-07 2ohq
I
Title: x-ray crystal structure of beta secretase complexed with compound 4
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2ohr.pdb.
hydrolase 10-jan-07 2ohr
I
Title: x-ray crystal structure of beta secretase complexed with compound 6a
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2ohs.pdb.
hydrolase 10-jan-07 2ohs
I
Title: x-ray crystal structure of beta secretase complexed with compound 6b
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2oht.pdb.
hydrolase 10-jan-07 2oht
I
Title: x-ray crystal structure of beta secretase complexed with compound 7
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2ohu.pdb.
hydrolase 10-jan-07 2ohu
I
Title: x-ray crystal structure of beta secretase complexed with compound 8b
Author: s. patel
Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
- 2oi2.pdb.
transferase 10-jan-07 2oi2
Mg
Title: streptococcus pneumoniae mevalonate kinase in complex with diphosphomevalonate
Author: j. l. andreassi, p. w. bilder, m. w. vetting, s. l. roderick, t. s. leyh
- 2oj9.pdb.
transferase 12-jan-07 2oj9
Title: structure of igf-1r kinase domain complexed with a benzimidazole inhibitor
Author: j. s. sack, b. l. jacobson
Keywords: igf-1r, kinase domain
- 2ojy.pdb.
oxidoreductase 15-jan-07 2ojy
Title: crystal structure of indol-3-acetaldehyde derived ttq-amide adduct of aromatic amine dehydrogenase
Author: a. roujeinikova, d. leys
Keywords: ttq
- 2ok4.pdb.
oxidoreductase 16-jan-07 2ok4
Title: crystal structure of aromatic amine dehydrogenase ttq- phenylacetaldehyde adduct oxidized with ferricyanide
Author: a. roujeinikova, d. leys
Keywords: ttq
- 2okb.pdb.
hydrolase 16-jan-07 2okb
Cl
Title: high resolution crystal structures of vaccinia virus dutpase
Author: n. schormann, d. chattopadhyay
Keywords: jelly-roll, superfamily, dutpase-like, forms tight trimer through an additional beta-sheet in each subunit, subunit beta-sheets are orthogonally packed around the three-fold axis
- 2okd.pdb.
hydrolase 16-jan-07 2okd
Cl
Title: high resolution crystal structures of vaccinia virus dutpase
Author: n. schormann, d. chattopadhyay
Keywords: jelly-roll, superfamily, dutpase-like, forms tight trimer through an additional beta-sheet in each subunit, subunit beta-sheets are orthogonally packed around the three-fold axis
- 2oke.pdb.
hydrolase 16-jan-07 2oke
Cl Mg
Title: high resolution crystal structures of vaccinia virus dutpase
Author: n. schormann, d. chattopadhyay
Keywords: jelly-roll, superfamily, dutpase-like, forms tight trimer through an additional beta-sheet in each subunit, subunit beta-sheets are orthogonally packed around the three-fold axis
- 2ol0.pdb.
hydrolase 18-jan-07 2ol0
Cl Mg
Title: high resolution crystal structures of vaccinia virus dutpase
Author: n. schormann, d. chattopadhyay
Keywords: jelly-roll, superfamily, dutpase-like, forms tight trimer through an additional beta-sheet in each subunit, subunit beta-sheets are orthogonally packed around the three-fold axis
- 2ol1.pdb.
hydrolase 18-jan-07 2ol1
Cl
Title: high resolution crystal structures of vaccinia virus dutpase
Author: n. schormann, d. chattopadhyay
Keywords: jelly-roll, superfamily, dutpase-like, forms tight trimer through an additional beta-sheet in each subunit, subunit beta-sheets are orthogonally packed around the three-fold axis
- 2oox.pdb.
transferase 26-jan-07 2oox
Title: crystal structure of the adenylate sensor from amp- activated protein kinase complexed with amp
Author: r. townley, l. shapiro
Keywords: kinase, amp, crystal structure
- 2ooy.pdb.
transferase 26-jan-07 2ooy
Title: crystal structure of the adenylate sensor from amp- activated protein kinase complexed with atp
Author: r. townley, l. shapiro
Keywords: kinase, amp, crystal structure
- 2oqn.pdb.
plant protein 31-jan-07 2oqn
Title: high pressure cryocooling of capillary sample cryoprotection and diffraction phasing at long wavelengths
Author: c. u. kim, q. hao, s. m. gruner
Keywords: capillary cryoprotection, sulfur sad phasing
- 2oqu.pdb.
hydrolase 01-feb-07 2oqu
Ca Xe
Title: high pressure cryocooling of capillary sample cryoprotection and diffraction phasing at long wavelengths
Author: c. u. kim, q. hao, s. m. gruner
Keywords: xenon, sad phasing
- 2osz.pdb.
structural protein 06-feb-07 2osz
Title: structure of nup58/45 suggests flexible nuclear pore diameter by intermolecular sliding
Author: i. melcak, a. hoelz, g. blobel
Keywords: structure, nucleoporin
- 2oug.pdb.
transcription 10-feb-07 2oug
Title: crystal structure of the rfah transcription factor at 2.1a resolution
Author: d. g. vassylyev, m. n. vassylyeva, v. svetlov, i. artsimovitch
Keywords: virulence, transcription pausing, transcription elongation
- 2out.pdb.
structural genomics, unknown function 12-feb-07 2out
(NMR, 20 structures)
Title: solution structure of hi1506, a novel two domain protein from haemophilus influenzae
Author: n. sari, y. he, v. doseeva, k. surabian, f. schwarz, o. herzberg, j. orban, structure 2 function project (s2f)
Keywords: nmr, haemophilus influenzae, hypothetical protein, structure 2 function project, s2f
- 2ov5.pdb.
hydrolase 13-feb-07 2ov5
Title: crystal structure of the kpc-2 carbapenemase
Author: k. wei, c. r. bethel, j. m. thomson, r. a. bonomo, f. van den akker
Keywords: beta-lactamase
- 2oz5.pdb.
structural genomics, unknown function 23-feb-07 2oz5
Cl
Title: crystal structure of mycobacterium tuberculosis protein tyrosine phosphatase ptpb in complex with the specific inhibitor omts
Author: c. grundner, c. l. gee, t. alber, tb structural genomics consortium (tbsgc)
Keywords: structural genomics, tb structural genomics consortium, tbsgc
- 2p0j.pdb.
hydrolase/dna 28-feb-07 2p0j
Title: structure of restriction endonuclease bstyi bound to non- cognate dna
Author: s. a. townson, j. c. samuelson, y. bao, s. y. xu, a. k. aggarwal
Keywords: dna recognition, scanning
- 2p15.pdb.
hormone receptor 02-mar-07 2p15
F
Title: crystal structure of the er alpha ligand binding domain with the agonist ortho-trifluoromethylphenylvinyl estradiol
Author: j. b. bruning, k. n. nettles, g. l. greene, y. kim
Keywords: ligand binding domain, helix 12
- 2p17.pdb.
structural genomics, unknown function 02-mar-07 2p17
Fe Se
Title: crystal structure of gk1651 from geobacillus kaustophilus
Author: j. zhu, j. t. swindell ii, l. chen, a. ebihara, a. shinkai, s. kuramitsu, s. yokoyama, z-q. fu, j. p. rose, b. c. wang, southeast collaboratory for structural genomics (secsg), riken structural genomics/proteomics initiative (rsgi)
Keywords: protein structure initiative
- 2p2l.pdb.
unknown function 07-mar-07 2p2l
Zn
Title: rac1-gdp-zinc complex
Author: g. prehna, c. e. stebbins
Keywords: zinc
- 2p3e.pdb.
lyase 08-mar-07 2p3e
Title: crystal structure of aq1208 from aquifex aeolicus
Author: j. zhu, j. t. swindell ii, l. chen, a. ebihara, a. shinkai, s. kuramitsu, s. yokoyama, z-q. fu, j. p. rose, b-c. wang, southeast collaboratory for structural genomics (secsg), riken structural genomics/proteomics initiative (rsgi)
Keywords: department of biophysics and biochemistry university of tokyo, psi, protein structure initiative, secsg, riken structural genomics/proteomics initiative, rsgi
- 2p7j.pdb.
transcription 20-mar-07 2p7j
Na Se
Title: crystal structure of the domain of putative sensory box/ggdef family protein from vibrio parahaemolyticus
Author: r. wu, a. james, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: structural genomics, mcsg, psi-2, protein structure initiative, midwest center for structural genomics
- 2p89.pdb.
ribonucleic acid 22-mar-07 2p89
(NMR, 20 structures)
Title: solution structure of the 3' pseudouridyation pocket of u65 snorna with bound substrate
Author: h. wu, j. feigon
Keywords: three-way junctions, double helix
- 2pa1.pdb.
metal binding protein 27-mar-07 2pa1
Cl
Title: structure of the pdz domain of human pdlim2 bound to a c- terminal extension from human beta-tropomyosin
Author: j. uppenberg, l. shrestha, j. elkins, n. burgess-brown, e. salah, g. bunkoczi, e. papagrigoriou, a. c. w. pike, a. p. turnbull, e. ugochukwu, c. umeano, f. von delft, j. weigelt, c. h. arrowsmith, a. edwards, m. sundstrom, d. a. doyle, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2pc4.pdb.
lyase 29-mar-07 2pc4
Title: crystal structure of fructose-bisphosphate aldolase from plasmodium falciparum in complex with trap-tail determined at 2.4 angstrom resolution
Author: j. bosch, c. a. buscaglia, b. krumm, t. cardozo, v. nussenzweig, w. g. j. hol, structural genomics of pathogenic protozoa consortium (sgpp)
Keywords: invasion machinery, plasmodium falciparum, structural genomics, psi, protein structure initiative, structural genomics of pathogenic protozoa consortium, sgpp
- 2pd1.pdb.
structural genomics, unknown function 30-mar-07 2pd1
Se
Title: crystal structure of ne2512 protein of unknown function from nitrosomonas europaea
Author: j. osipiuk, e. evdokimova, o. kagan, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: ne2512 protein, structural genomics, apc7253, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2pi6.pdb.
signaling protein 13-apr-07 2pi6
Title: crystal structure of the sheep signalling glycoprotein (sps- 40) complex with 2-methyl-2-4-pentanediol at 1.65a resolution reveals specific binding characteristics of sps- 40
Author: p. sharma, n. singh, s. sharma, p. kaur, c. betzel, t. p. singh
Keywords: binding
- 2pi7.pdb.
hydrolase 13-apr-07 2pi7
Title: structure of the catalytic domain of the chick retinal neurite inhibitor-receptor protein tyrosine phosphatase cryp-2/cptpro
Author: t. s. girish, b. gopal
- 2pif.pdb.
structural genomics, unknown function 13-apr-07 2pif
Se
Title: crystal structure of upf0317 protein pspto_5379 from pseudomonas syringae pv. tomato. northeast structural genomics target psr181
Author: j. seetharaman, m. abashidze, f. forouhar, d. wang, y. fang, k. cunningham, l-c. ma, r. xia, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2pih.pdb.
structural genomics, unknown function 13-apr-07 2pih
Se
Title: crystal structure of protein ymca from bacillus subtilis, northeast structural genomics target sr375
Author: j. seetharaman, m. abashidze, f. forouhar, d. wang, y. fang, k. cunningham, l-c. ma, r. xia, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: regulate community development, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2pim.pdb.
structural genomics, unknown function 13-apr-07 2pim
Se
Title: crystal structure of phenylacetic acid degradation-related protein (yp_298971.1) from ralstonia eutropha jmp134 at 2.20 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: thioesterase superfamily, phenylacetic acid degradation-related protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2pjq.pdb.
structural genomics, unknown function 16-apr-07 2pjq
Se
Title: crystal structure of q88u62_lacpl from lactobacillus plantarum. northeast structural genomics target lpr71
Author: j. benach, m. su, j. seetharaman, f. forouhar, c. x. chen, k. cunningham, l-c. ma, l. owens, m. baran, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: nesg, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
- 2pjv.pdb.
viral protein 16-apr-07 2pjv
(NMR, 38 structures)
Title: solution structure of hiv-1 gp41 fusion domain bound to dpc micelle
Author: y li, l. k. tamm
Keywords: gp41, fusion, peptide, domain, membrane, protein, dpc, virus
- 2pjx.pdb.
endocytosis/exocytosis 16-apr-07 2pjx
Title: crystal structure of the munc18c/syntaxin4 n-peptide complex
Author: s. h. hu, c. f. latham, c. l. gee, d. e. james, j. l. martin
Keywords: sm protein, syntaxin, snare proteins
- 2pk7.pdb.
structural genomics, unknown function 17-apr-07 2pk7
Se
Title: crystal structure of the q4kft4_psef5 protein from pseudomonas fluorescens. nesg target plr1
Author: s. m. vorobiev, h. neely, s. jayaraman, c. x. chen, h. janjua, r. xiao, t. acton, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: plr1, putative tetraacyldisaccharide-1-p 4-kinase, q4kft4, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
- 2pkw.pdb.
structural genomics, unknown function 18-apr-07 2pkw
Se
Title: crystal structure of upf0341 protein yhiq from salmonella typhimurium, northeast structural genomics consortium target str221
Author: f. forouhar, m. su, j. seetharaman, y. fang, r. xiao, k. cunningham, l- c. ma, l. owens, j. liu, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
- 2pl3.pdb.
hydrolase 19-apr-07 2pl3
Mg
Title: human dead-box rna helicase ddx10, dead domain in complex with adp
Author: t. karlberg, l. lehtio, c. h. arrowsmith, h. berglund, r. d. busam, r. collins, l. g. dahlgren, a. edwards, s. flodin, a. flores, s. graslund, b. m. hallberg, m. hammarstrom, i. johansson, a. kallas, t. kotenyova, m. moche, p. nordlund, t. nyman, c. persson, j. sagemark, p. stenmark, m. sundstrom, a. g. thorsell, s. van den berg, j. weigelt, l. holmberg-schiavone, structural genomics consortium (sgc)
Keywords: helicase, dead, structural genomics, structural genomics consortium, sgc
- 2pla.pdb.
oxidoreductase 19-apr-07 2pla
Cl
Title: crystal structure of human glycerol-3-phosphate dehydrogenase 1-like protein
Author: j. uppenberg, c. smee, v. hozjan, k. kavanagh, g. bunkoczi, e. papagrigoriou, a. c. w. pike, e. ugochukwu, c. umeano, f. von delft, j. weigelt, c. h. arrowsmith, a. edwards, m. sundstrom, u. oppermann, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2plg.pdb.
structural genomics, unknown function 19-apr-07 2plg
Se
Title: crystal structure of t110839 protein from synechococcus elongatus
Author: m. madegowda, s. eswaramoorthy, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
Keywords: uncharacterized, duf1821, 10450c, nysgxrc, psi-2, structural genomics, protein structure initiative, new york structural genomix research consortium
- 2pln.pdb.
signaling protein 20-apr-07 2pln
Se
Title: crystal structure analysis of hp1043, an orphan resonse regulator of h. pylori
Author: h. m. lee, d. u. kim, j. s. byun, h. s. cho
- 2plq.pdb.
hydrolase 20-apr-07 2plq
Title: crystal structure of the amidase from geobacillus pallidus rapc8
Author: s. w. kimani, b. t. sewell, v. b. agarkar, m. f. sayed, d. a. cowan
Keywords: alpha-beta-beta-alpha
- 2pmj.pdb.
hydrolase 23-apr-07 2pmj
Title: crystal structure of the complex formed between phospholipase a2 and 1, 2 benzopyrone at 2.4 a resolution
Author: s. kumar, n. singh, s. sharma, p. kaur, t. p. singh
Keywords: binding
- 2pn7.pdb.
transferase 24-apr-07 2pn7
Title: human gamma-glutamyl cyclotransferase
Author: a. j. oakley, p. g. board
Keywords: dimer, human gamma-glutamyl cyclotransferase
- 2pnd.pdb.
immune system 24-apr-07 2pnd
Title: structure or murine crig
Author: c. wiesmann
Keywords: ig-like domain
- 2pnf.pdb.
oxidoreductase 24-apr-07 2pnf
Title: structure of aquifex aeolicus fabg 3-oxoacyl-(acyl-carrier protein) reductase
Author: q. mao, t. c. umland
Keywords: rossmann fold
- 2uut.pdb.
hydrolase 07-mar-07 2uut
Title: the 2.4 angstrom resolution structure of the d346g mutant of the sapporo virus rdrp polymerase
Author: s. w. b. fullerton, i. robel, l. schult, j. gebhardt, p. tucker, j. rohayem
Keywords: transferase, rna-directed rna polymerase, polyprotein, atp-binding, thiol protease
- 2uuw.pdb.
hydrolase 07-mar-07 2uuw
Title: 2.75 angstrom structure of the d347g d348g mutant structure of sapporo virus rdrp polymerase
Author: s. fullerton, i. robel, l. schult, j. gebhardt, p. tucker, j. rohayem
Keywords: transferase, rna-directed rna polymerase, polyprotein, atp-binding, thiol protease
- 2uux.pdb.
inhibitor 08-mar-07 2uux
Title: structure of the tryptase inhibitor tdpi from a tick
Author: c. siebold, g. c. paesen, k. harlos, m. f. peacey, p. a. nuttall, d. i. stuart
- 2uuy.pdb.
hydrolase 08-mar-07 2uuy
Cl Ca
Title: structure of a tick tryptase inhibitor in complex with bovine trypsin
Author: c. siebold, g. c. paesen, k. harlos, m. f. peacey, p. a. nuttall, d. i. stuart
Keywords: zymogen, protease, hydrolase, digestion, metal-binding, serine protease, tryptase inhibitor
- 2uxw.pdb.
oxidoreductase 30-mar-07 2uxw
Title: crystal structure of human very long chain acyl-coa dehydrogenase (acadvl)
Author: a. c. w. pike, v. hozjan, c. smee, g. berridge, n. burgess, e. salah, g. bunkoczi, j. uppenberg, e. ugochukwu, f. von delft, c. h. arrowsmith, a. edwards, j. weigelt, m. sundstrom, u. oppermann
Keywords: mitochondrial fatty acid beta-oxidation, mitochondrion, oxidoreductase, cardiomyopathy
- 2yvv.pdb.
lyase 16-apr-07 2yvv
Title: crystal structure of hyluranidase complexed with lactose at 2.6 a resolution reveals three specific sugar recognition sites
Author: p. mishra, r. prem kumar, n. singh, s. sharma, p. kaur, m. perbandt, c. betzel, v. bhakuni, t. p. singh
Keywords: lactose, complex, hyaluronidase
- 2yw0.pdb.
lyase 18-apr-07 2yw0
Title: crystal structure of hyluranidase trimer at 2.6 a resolution
Author: r. prem kumar, p. mishra, n. singh, m. perbandt, p. kaur, s. sharma, c. betzel, v. bhakuni, t. p. singh
Keywords: hyaluronidase
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