Recent PDB releases or updates: week of 16 March 2007

• 1olr.pdb. hydrolase 11-aug-03 1olr
  Title: the humicola grisea cel12a enzyme structure at 1.2 a resolution
  Author: m. sandgren, p. j. gualfetti, a. shaw, l. s. gross, m. saldajeno, g. i. berglund, t. a. jones, c. mitchinson
  Keywords: cellulase, cellulose degradation, endoglucanase, glycosyl hydrolase, gh family 12, humicola grisea cel12a
  
• 1v7o.pdb. hydrolase 18-dec-03 1v7o Se
  Title: alanyl-trna synthetase editing domain homologue protein from pyrococcus horikoshii
  Author: a. okada, m. yao, m. sokabe, i. tanaka
  
  
• 1w3a.pdb. toxin/lectin 12-jul-04 1w3a
  Title: three dimensional structure of a novel pore-forming lectin from the mushroom laetiporus sulphureus
  Author: j. m. mancheno, h. tateno, i. j. goldstein, m. martinez-ripoll, j. a. hermoso
  Keywords: hemolytic lectin, oligomer, beta- trefoil
  
• 1w3f.pdb. toxin/lectin 14-jul-04 1w3f
  Title: crystal structure of the hemolytic lectin from the mushroom laetiporus sulphureus complexed with n-acetyllactosamine in the gamma motif
  Author: j. m. mancheno, h. tateno, i. j. goldstein, m. martinez-ripoll, j. a. hermoso
  Keywords: hemolytic lectin, oligomer, beta- trefoil
  
• 1w3g.pdb. toxin/lectin 15-jul-04 1w3g
  Title: hemolytic lectin from the mushroom laetiporus sulphureus complexed with two n-acetyllactosamine molecules.
  Author: j. m. mancheno, h. tateno, i. j. goldstein, m. martinez-ripoll, j. a. hermoso
  Keywords: hemolytic lectin, oligomer, beta- trefoil
  
• 1w3m.pdb. antibiotic 16-jul-04 1w3m Cl Ca
  Title: crystal structure of tsushimycin
  Author: g. bunkoczi, l. vertesy, g. m. sheldrick
  Keywords: daptomycin, lipopetide, antibiotic
  
• 1y9o.pdb. hydrolase 16-dec-04 1y9o (NMR, 20 structures)
  Title: 1h nmr structure of acylphosphatase from the hyperthermophile sulfolobus solfataricus
  Author: a. corazza, c. rosano, k. pagano, v. alverdi, g. esposito, c. capanni, f. bemporad, g. plakoutsi, m. stefani, f. chiti, s. zuccotti, m. bolognesi, p. viglino
  Keywords: acylphosphatase, hyperthermophile, nmr
  
• 1z83.pdb. transferase 29-mar-05 1z83 Zn
  Title: crystal structure of human ak1a in complex with ap5a
  Author: p. filippakopoulos, g. bunkoczi, a. jansson, a. schreurs, s. knapp, a. edwards, f. von delft, m. sundstrom, structural genomics consortium (sgc)
  Keywords: humna, ap5a, diadenosine pentaphosphate, nucleotide kinase, structural genomics, structural genomics consortium, sgc
  
• 2bsy.pdb. hydrolase 24-may-05 2bsy
  Title: epstein barr virus dutpase
  Author: n. tarbouriech, m. buisson, j. -m. seigneurin, s. cusack, w. p. burmeister
  Keywords: monomer, hydrolase, nucleotide metabolism
  
• 2bx5.pdb. antibody 22-jul-05 2bx5
  Title: is fr1 the antibody's achillies heel
  Author: l. c. james
  Keywords: lcdd, light-chain, antibody, aggregation, fr1
  
• 2cb0.pdb. isomerase 23-dec-05 2cb0 Se
  Title: crystal structure of glucosamine 6-phosphate deaminase from pyrococcus furiosus
  Author: k. j. kim, m. h. kim, b. s. kang
  Keywords: chitin degradation, aldose-ketose isomerase
  
• 2cdt.pdb. sh3-domain 27-jan-06 2cdt
  Title: alpha-spectrin sh3 domain a56s mutant
  Author: s. casares, a. camara-artigas, m. c. vega, o. lopez-mayorga, f. conejero-lara
  Keywords: cytoskeleton, calmodulin-binding, actin-binding
  
• 2cgy.pdb. lectin 10-mar-06 2cgy
  Title: structure of helix pomatia agglutinin with forsmann antigen
  Author: j. -f. sanchez, j. lescar, a. audfray, c. gautier, v. chazalet, j. gagnon, c. breton, a. imberty, e. mitchell
  Keywords: snail, helix pomatia, forsmann antigen
  
• 2dfz.pdb. sugar binding protein 07-mar-06 2dfz
  Title: crystal structure of cyclodextrin-binding protein complexed with gamma-cyclodextrin
  Author: t. tonozuka, a. sogawa, m. yamada, n. matsumoto, h. yoshida, s. kamitori, k. ichikawa, m. mizuno, a. nishikawa, y. sakano
  
  
• 2dg6.pdb. gene regulation 08-mar-06 2dg6 Se
  Title: crystal structure of the putative transcriptional regulator sco5550 from streptomyces coelicolor a3(2)
  Author: t. hayashi, y. tanaka, n. sakai, m. yao, t. tamura, i. tanaka
  Keywords: merr family
  
• 2dg7.pdb. gene regulation 08-mar-06 2dg7 Se
  Title: crystal structure of the putative transcriptional regulator sco0337 from streptomyces coelicolor a3(2)
  Author: t. hayashi, y. tanaka, n. sakai, m. yao, t. tamura, i. tanaka
  Keywords: tetr family
  
• 2dg8.pdb. gene regulation 08-mar-06 2dg8
  Title: crystal structure of the putative trasncriptional regulator sco7518 from streptomyces coelicolor a3(2)
  Author: t. hayashi, n. watanabe, n. sakai, t. tamura, m. yao, i. tanaka
  Keywords: tetr family
  
• 2dgd.pdb. lyase 10-mar-06 2dgd Se
  Title: crystal structure of st0656, a function unknown protein from sulfolobus tokodaii
  Author: y. tanaka, t. sasaki, e. tanabe, m. yao, i. tanaka, i. kumagai, k. tsumoto
  Keywords: alpha/beta structure
  
• 2di2.pdb. metal binding protein 27-mar-06 2di2 Zn (NMR, 13 structures)
  Title: nmr structure of the hiv-2 nucleocapsid protein
  Author: t. matsui, y. kodera, h. endoh, e. miyauchi, h. komatsu, k. sato, t. tanaka, t. kohno, t. maeda
  Keywords: hiv-2, rna recognition, zinc finger, mutant
  
• 2djb.pdb. gene regulation 31-mar-06 2djb Zn (NMR, 20 structures)
  Title: solution structure of the ring domain of the human polycomb group ring finger protein 6
  Author: k. miyamoto, t. kigawa, m. sato, s. koshiba, m. inoue, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: ring finger protein 134, pcgf6, ring domain, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dtg.pdb. hormone receptor/immune system 12-jul-06 2dtg
  Title: insulin receptor (ir) ectodomain in complex with fab's
  Author: m. c. lawrence, v. a. streltsov
  
  
• 2dtq.pdb. immune system 14-jul-06 2dtq
  Title: crystal structure of the fucosylated fc fragment from human immunoglobulin g1
  Author: s. matsumiya, y. yamaguchi, j. saito, m. nagano, h. sasakawa, s. otaki, m. satoh, k. shitara, k. kato
  Keywords: igg1
  
• 2dts.pdb. immune system 14-jul-06 2dts
  Title: crystal structure of the defucosylated fc fragment from human immunoglobulin g1
  Author: s. matsumiya, y. yamaguchi, j. saito, m. nagano, h. sasakawa, s. otaki, m. satoh, k. shitara, k. kato
  Keywords: igg1, defucosylated glycoform
  
• 2du3.pdb. ligase/rna 20-jul-06 2du3
  Title: crystal structure of archaeoglobus fulgidus o-phosphoseryl- trna synthetase complexed with trnacys and o-phosphoserine
  Author: r. fukunaga
  
  
• 2du4.pdb. ligase/rna 20-jul-06 2du4
  Title: crystal structure of archaeoglobus fulgidus o-phosphoseryl- trna synthetase complexed with trnacys
  Author: r. fukunaga
  
  
• 2du5.pdb. ligase/rna 20-jul-06 2du5
  Title: crystal structure of archaeoglobus fulgidus o-phosphoseryl- trna synthetase e418n/e420n mutant complexed with trnaopal and o-phosphoserine ("opal complex")
  Author: r. fukunaga
  
  
• 2du6.pdb. ligase/rna 20-jul-06 2du6
  Title: crystal structure of archaeoglobus fulgidus o-phosphoseryl- trna synthetase e418n/e420n mutant complexed with trnaamber and o-phosphoserine ("amber complex")
  Author: r. fukunaga
  
  
• 2du7.pdb. ligase 20-jul-06 2du7
  Title: crystal structure of methanococcus jannacshii o- phosphoseryl-trna synthetase
  Author: r. fukunaga
  
  
• 2dv6.pdb. oxidoreductase 28-jul-06 2dv6 Cu K
  Title: crystal structure of nitrite reductase from hyphomicrobium denitrificans
  Author: m. nojiri, y. xie, t. yamamoto, t. inoue, s. suzuki, y. kai
  Keywords: electron transfer, reduction, denitrification
  
• 2dvw.pdb. cell cycle/protein-binding 01-aug-06 2dvw
  Title: structure of the oncoprotein gankyrin in complex with s6 atpase of the 26s proteasome
  Author: s. yokoyama, b. padmanabhan, riken structural genomics/proteomics initiative (rsgi)
  Keywords: a-helical domain, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dws.pdb. oxidoreductase 16-aug-06 2dws Cu
  Title: cu-containing nitrite reductase at ph 8.4 with bound nitrite
  Author: f. jacobson
  Keywords: cupredoxin, denitrification
  
• 2dwt.pdb. oxidoreductase 17-aug-06 2dwt Cu
  Title: cu-containing nitrite reductase at ph 6.0 with bound nitrite
  Author: f. jacobson
  Keywords: cupredoxin, denitrification
  
• 2dxp.pdb. hydrolase 29-aug-06 2dxp
  Title: crystal structure of the complex of the archaeal sulfolobus ptp-fold phosphatase with phosphopeptides a-(p)y-r
  Author: h. m. chu, a. h. j. wang
  
  
• 2dy2.pdb. oxidoreductase 05-sep-06 2dy2 Cu
  Title: nitrite reductase ph 6.0
  Author: f. jacobson
  Keywords: cupredoxin, denitrification
  
• 2dy9.pdb. transferase 08-sep-06 2dy9 Cl Mg
  Title: crystal structure of nucleoside diphosphate kinase in complex with adp
  Author: m. kato-murayama, k. murayama, t. terada, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: kinase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dya.pdb. transferase 08-sep-06 2dya Cl Mg
  Title: crystal structure of complex between adenine nucleotide and nucleoside diphosphate kinase
  Author: m. kato-murayama, k. murayama, t. terada, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: kinase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2e25.pdb. hydrolase 08-nov-06 2e25 F Zn
  Title: the crystal structure of the t109s mutant of e. coli dihydroorotase complexed with an inhibitor 5-fluoroorotate
  Author: m. lee, m. j. maher, j. m. guss
  
  
• 2e2d.pdb. hydrolase/hydrolase inhibitor 11-nov-06 2e2d Zn Ca
  Title: flexibility and variability of timp binding: x-ray structure of the complex between collagenase-3/mmp-13 and timp-2
  Author: k. maskos, r. lang, h. tschesche, w. bode
  Keywords: flexibility
  
• 2e48.pdb. oxidoreductase 05-dec-06 2e48
  Title: crystal structure of human d-amino acid oxidase: substrate- free holoenzyme
  Author: t. kawazoe, h. tsuge, t. imagawa, k. fukui
  Keywords: substrate-free holoenzyme
  
• 2e49.pdb. oxidoreductase 05-dec-06 2e49
  Title: crystal structure of human d-amino acid oxidase in complex with imino-serine
  Author: t. kawazoe, h. tsuge, t. imagawa, k. fukui
  Keywords: imino-serine complex
  
• 2e4a.pdb. oxidoreductase 05-dec-06 2e4a
  Title: crystal structure of human d-amino acid oxidase in complex with o-aminobenzoate
  Author: t. kawazoe, h. tsuge, t. imagawa, k. fukui
  Keywords: o-aminobenzoate complex
  
• 2e7f.pdb. transferase 09-jan-07 2e7f Ca
  Title: 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase complexed with methyltetrahydrofolate to 2.2 angsrom resolution
  Author: t. i. doukov, c. l. drennan, h. hemmi, s. w. ragsdale
  Keywords: corrionoid, vitamin b12, tim barrel
  
• 2e82.pdb. oxidoreductase 16-jan-07 2e82
  Title: crystal structure of human d-amino acid oxidase complexed with imino-dopa
  Author: t. kawazoe, h. tsuge, t. imagawa, s. kuramitsu, k. fukui
  Keywords: imino-dopa complex
  
• 2f7v.pdb. hydrolase 01-dec-05 2f7v Co
  Title: structure of acetylcitrulline deacetylase complexed with one co
  Author: d. shi, x. yu, l. roth, n. m. allewell, m. tuchman
  
  
• 2f8h.pdb. hydrolase 02-dec-05 2f8h
  Title: structure of acetylcitrulline deacetylase from xanthomonas campestris in metal-free form
  Author: d. shi, x. yu, l. roth, n. m. allewell, m. tuchman
  
  
• 2fdo.pdb. structural genomics, unknown function 14-dec-05 2fdo Se
  Title: crystal structure of the conserved hypothetical protein af2331 from archaeoglobus fulgidus dsm 4304 reveals a new type of alpha/beta fold
  Author: s. wang, o. kirillova, m. chruszcz, m. t. cymborowski, t. skarina, e. gorodichtchenskaia, a. savchenko, a. m. edwards, w. minor, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2g5x.pdb. hydrolase 23-feb-06 2g5x
  Title: crystal structure of lychnin a type 1 ribosome inactivating protein (rip)
  Author: s. fermani, g. falini, g. tosi, a. ripamonti, l. polito, a. bolognesi, f. stirpe
  
  
• 2g7n.pdb. hydrolase 28-feb-06 2g7n Zn Ag
  Title: structure of the light chain of botulinum neurotoxin serotype a bound to small molecule inhibitors
  Author: z. fu, m. r. baldwin, g. e. boldt, k. d. janda, j. t. barbieri, j. -j. p. kim
  Keywords: zinc protease, snap25
  
• 2g82.pdb. oxidoreductase 01-mar-06 2g82 Na
  Title: high resolution structures of thermus aquaticus glyceraldehyde-3-phosphate dehydrogenase: role of 220's loop motion in catalysis
  Author: j. l. jenkins, r. buencamino, j. j. tanner
  Keywords: g3pdh, glycolysis, oxidoreductase, nad, rossmann fold
  
• 2g9w.pdb. dna binding protein 07-mar-06 2g9w Cl Se
  Title: crystal structure of rv1846c, a putative transcriptional regulatory protein of mycobacterium tuberculosis
  Author: f. a. saul, a. haouz, c. fiez-vandal, w. shepard, p. m. alzari
  Keywords: bacterial transcription repressor
  
• 2ga2.pdb. hydrolase 07-mar-06 2ga2 Cl Mn Br
  Title: h-metap2 complexed with a193400
  Author: c. h. park
  
  
• 2gdt.pdb. viral protein, hydrolase 17-mar-06 2gdt (NMR, 20 structures)
  Title: nmr structure of the nonstructural protein 1 (nsp1) from the sars coronavirus
  Author: m. s. almeida, t. herrmann, m. geralt, m. a. johnson, k. saikatendu, j. joseph, r. c. subramanian, b. w. neuman, m. j. buchmeier, r. c. stevens, p. kuhn, i. a. wilson, k. wuthrich, joint center for structural genomics (jcsg)
  Keywords: nmr, beta-barrel, alpha-beta, virus, replicase, structural genomics, psi-2, protein structure initiative, joint center for structural genomics, jcsg
  
• 2gkg.pdb. signaling protein 01-apr-06 2gkg
  Title: receiver domain from myxococcus xanthus social motility protein frzs
  Author: n. echols, j. fraser, j. merlie, d. zusman, t. alber
  Keywords: receiver domain, signalling, high resolution
  
• 2gkl.pdb. hydrolase 03-apr-06 2gkl Zn
  Title: crystal structure of the zinc carbapenemase cpha in complex with the inhibitor pyridine-2,4-dicarboxylate
  Author: g. garau, o. dideberg
  Keywords: lactamase, inhibitor, zn
  
• 2gle.pdb. protein binding 04-apr-06 2gle (NMR, 20 structures)
  Title: solution structure of neurabin sam domain
  Author: t. ju, j. hudak, w. peti
  Keywords: scaffold, protein protein interaction
  
• 2gll.pdb. lyase 05-apr-06 2gll Cl
  Title: crystal structure of (3r)-hydroxyacyl-acyl carrier protein dehydratase(fabz) from helicobacter pylori
  Author: l. zhang, w. liu, x. shen, h. jiang
  
  
• 2glm.pdb. lyase 05-apr-06 2glm Cl
  Title: crystal structure of (3r)-hydroxyacyl-acyl carrier protein dehydratase(fabz) from helicobacter pylori complexed with compound 2
  Author: l. zhang, w. liu, x. shen, h. jiang
  
  
• 2glp.pdb. lyase 05-apr-06 2glp Cl Br
  Title: crystal structure of (3r)-hydroxyacyl-acyl carrier protein dehydratase(fabz) from helicobacter pylori complexed with compound 1
  Author: l. zhang, w. liu, x. shen, h. jiang
  
  
• 2glv.pdb. lyase 05-apr-06 2glv Cl
  Title: crystal structure of (3r)-hydroxyacyl-acyl carrier protein dehydratase(fabz) mutant(y100a) from helicobacter pylori
  Author: l. zhang, w. liu, x. shen, h. jiang
  
  
• 2gmo.pdb. viral protein 07-apr-06 2gmo (NMR, 10 structures)
  Title: nmr-structure of an independently folded c-terminal domain of influenza polymerase subunit pb2
  Author: j. boudet, f. tarendeau, d. guilligay, p. mas, c. m. bougault, s. cusack, j. -p. simorre, d. j. hart
  
  
• 2go2.pdb. protein binding 12-apr-06 2go2
  Title: crystal structure of bbki, a kunitz-type kallikrein inhibitor
  Author: m. v. a. s. navarro, r. c. garratt
  
  
• 2gs9.pdb. transferase 25-apr-06 2gs9 Se
  Title: crystal structure of tt1324 from thermus thermophilis hb8
  Author: s. kamitori, a. abe, a. ebihara, m. kanagawa, n. nakagawa, c. kuroishi, y. agari, s. kuramitsu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2gsj.pdb. hydrolase 26-apr-06 2gsj
  Title: cdna cloning and 1.75a crystal structure determination of ppl2, a novel chimerolectin from parkia platycephala seeds exhibiting endochitinolytic activity
  Author: b. s. cavada, f. b. moreno, b. a. da rocha, w. f. de azevedo jr. , r. e. r. castellon, g. v. goersch, c. s. nagano, e. p. de souza, k. s. nascimento, g. radis-baptista, p. delatorre, y. leroy, m. h. toyama, v. p. pinto, a. h. sampaio, d. barettino, h. debray, j. j. calvete, l. sanz
  Keywords: mimosoideae, chimerolectin, endochitinase, glycosyl hydrolase family 18, equilibrium sedimentation, x-ray crystal structure
  
• 2gtf.pdb. transport protein 27-apr-06 2gtf Fe
  Title: crystal structure of nitrophorin 2 complex with pyrimidine
  Author: a. weichsel, w. r. montfort
  Keywords: lipocalin, ferric heme, pyrimidine
  
• 2gui.pdb. transferase 30-apr-06 2gui Mn
  Title: structure and funciton of cyclized versions of the proofreading exonuclease subunit of e. coli dna polymerase iii
  Author: a. y. park, p. d. carr, d. l. ollis, n. e. dixon
  
  
• 2hi9.pdb. hydrolase inhibitor 29-jun-06 2hi9
  Title: crystal structure of human native protein c inhibitor
  Author: w. li, t. e. adams, j. a. huntington
  Keywords: coagulation, haemostasis, thrombin inhibitor, activated protein c inhibitor, acrosin inhibitor, serine protease inhibitor
  
• 2hmd.pdb. deoxyribonucleic acid 11-jul-06 2hmd (NMR, minimized average structure)
  Title: stereochemistry modulates stability of reduced inter-strand cross-links arising from r- and s-alpha-methyl-gamma-oh-1, n2-propano-2'-deoxyguanine in the 5'-cpg-3' dna sequence
  Author: y. -j. cho, i. d. kozekov, t. m. harris, c. j. rizzo, m. p. stone
  
  
• 2hmr.pdb. deoxyribonucleic acid 11-jul-06 2hmr (NMR, minimized average structure)
  Title: solution structure of reduced interstrand cross-link arising from s-alpha-methyl-gamma-oh-1,n2-propano-2'- deoxyguanosine in the 5'-cpg-3' dna sequence
  Author: y. -j. cho, i. d. kozekov, t. m. harris, c. j. rizzo, m. p. stone
  
  
• 2hrc.pdb. lyase 20-jul-06 2hrc Cl Fe
  Title: 1.7 angstrom structure of human ferrochelatase variant r115l
  Author: a. medlock, l. swartz, t. a. dailey, h. a. dailey, w. n. lanzilotta
  Keywords: ferrochelatase, protoporphyrin ix, x-ray crystallography
  
• 2hre.pdb. lyase 20-jul-06 2hre Fe
  Title: structure of human ferrochelatase variant e343k with protoporphyrin ix bound
  Author: a. medlock, l. swartz, t. a. dailey, h. a. dailey, w. n. lanzilotta
  Keywords: ferrochelatase, protoporphyrin ix
  
• 2hsx.pdb. viral protein, hydrolase 24-jul-06 2hsx (NMR)
  Title: nmr structure of the nonstructural protein 1 (nsp1) from the sars coronavirus
  Author: m. s. almeida, t. herrmann, m. geralt, m. a. johnson, k. saikatendu, j. joseph, r. c. subramanian, b. w. neuman, m. j. buchmeier, r. c. stevens, p. kuhn, i. a. wilson, k. wuthrich, joint center for structural genomics (jcsg)
  Keywords: nmr, beta-barrel, alpha-beta, virus, replicase, structural genomics, psi-2, protein structure initiative, joint center for structural genomics, jcsg
  
• 2i3b.pdb. hydrolase 17-aug-06 2i3b (NMR, 20 structures)
  Title: solution structure of a human cancer-related nucleoside triphosphatase
  Author: w. j. placzek, m. s. almeida, k. wuthrich
  Keywords: aaa, rossmann
  
• 2i5o.pdb. transferase 25-aug-06 2i5o Zn (NMR, 15 structures)
  Title: solution structure of the ubiquitin-binding zinc finger (ubz) domain of the human dna y-polymerase eta
  Author: p. zhou, m. g. bomar
  Keywords: dna polymerase,pol eta, ubz, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain
  
• 2i6f.pdb. signaling protein 28-aug-06 2i6f Cl
  Title: receiver domain from myxococcus xanthus social motility protein frzs
  Author: n. echols, j. fraser, j. merlie, d. zusman, t. alber
  Keywords: signaling, receiver domain, two-component
  
• 2i6i.pdb. hydrolase 29-aug-06 2i6i
  Title: crystal structures of the archaeal sulfolobus ptp-fold phosphatase
  Author: h. m. chu, a. h. j. wang
  
  
• 2i6j.pdb. hydrolase 29-aug-06 2i6j
  Title: crystal structure of the complex of the archaeal sulfolobus ptp-fold phosphatase with phosphate ion
  Author: h. m. chu, a. h. j. wang
  
  
• 2i6m.pdb. hydrolase 29-aug-06 2i6m W
  Title: crystal structure of the complexes of the archaeal sulfolobus ptp-fold phosphatase with tungstate
  Author: h. m. chu, a. h. j. wang
  
  
• 2i6o.pdb. hydrolase 29-aug-06 2i6o Ca
  Title: crystal structure of the complex of the archaeal sulfolobus ptp-fold phosphatase with phosphopeptides n-g-(p)y-k-n
  Author: h. m. chu, a. h. j. wang
  Keywords: tyrosine phosphatase
  
• 2i6p.pdb. hydrolase 29-aug-06 2i6p
  Title: crystal structure of the complex of the archaeal sulfolobus ptp-fold phosphatase with pnpp
  Author: h. m. chu, a. h. j. wang
  Keywords: tyrosine phosphatase
  
• 2idq.pdb. electron transport 15-sep-06 2idq Cu
  Title: structure of m98a mutant of amicyanin, cu(ii)
  Author: c. j. carrell, j. k. ma, w. antholine, j. p. hosler, f. s. mathews, v. l. davidson
  
  
• 2ids.pdb. electron transport 15-sep-06 2ids Cu
  Title: structure of m98a mutant of amicyanin, cu(i)
  Author: c. j. carrell, j. k. ma, w. antholine, j. p. hosler, f. s. mathews, v. l. davidson
  
  
• 2idt.pdb. electron transport 15-sep-06 2idt Cu
  Title: structure of m98q mutant of amicyanin, cu(ii)
  Author: c. j. carrell, j. k. ma, w. antholine, j. p. hosler, f. s. mathews, v. l. davidson
  
  
• 2idu.pdb. electron transport 15-sep-06 2idu Cu
  Title: structure of m98q mutant of amicyanin, cu(i)
  Author: c. j. carrell, j. k. ma, w. antholine, j. p. hosler, f. s. mathews, v. l. davidson
  
  
• 2ief.pdb. dna binding protein/dna 18-sep-06 2ief
  Title: structure of the cooperative excisionase (xis)-dna complex reveals a micronucleoprotein filament
  Author: m. a. abbani, c. v. papagiannis, m. d. sam, d. cascio, r. c. johnson, r. t. clubb
  
  
• 2ipk.pdb. immune system 12-oct-06 2ipk
  Title: crystal structure of the mhc class ii molecule hla-dr1 in complex with the fluorogenic peptide, acpkxvkqntlklat (x=3- [5-(dimethylamino)-1,3-dioxo-1,3-dihydro-2h-isoindol-2-yl]- l-alanine) and the superantigen, sec3 variant 3b2
  Author: t. t. nguyen, l. j. stern
  Keywords: dr1, mhc, major histocompatibility complex, fluorogenic probe, sec3, 4-(n,n-dimethylamino) phthalimidoalanyl, dapa
  
• 2ise.pdb. toxin 17-oct-06 2ise Zn
  Title: botulinum neurotoxin a light chain wt crystal form a
  Author: a. t. brunger, c. m. stegmann
  
  
• 2isg.pdb. toxin 17-oct-06 2isg Zn Ni
  Title: botulinum neurotoxin a light chain wt crystal form b
  Author: a. t. brunger, c. m. stegmann
  
  
• 2ish.pdb. toxin 17-oct-06 2ish Zn
  Title: botulinum neurotoxin a light chain wt crystal form c
  Author: a. t. brunger, c. m. stegmann
  
  
• 2iv9.pdb. endocytosis/regulator 08-jun-06 2iv9
  Title: b2-appendage from ap2 in complex with eps15 peptide
  Author: m. g. j. ford, e. m. schmid, h. t. mcmahon
  Keywords: endocytosis/regulator complex, b2, ear, eps15, adaptor, calcium, appendage, coated pits, endocytosis, phosphorylation
  
• 2izq.pdb. antibiotic 26-jul-06 2izq I K
  Title: gramicidin d complex with ki
  Author: a. olczak, m. l. glowka, m. szczesio, j. bojarska, w. l. duax, b. m. burkhart, z. wawrzak
  Keywords: high resolution study, double- stranded gramicidin dimer, anomalous signal, antibiotic
  
• 2j4j.pdb. transferase 01-sep-06 2j4j Co Mg
  Title: crystal structure of uridylate kinase from sulfolobus solfataricus in complex with ump and amppcp to 2.1 angstrom resolution
  Author: k. s. jensen, e. johansson, k. f. jensen
  Keywords: kinase, ump kinase, transferase, aspartokinase fold, pyrimidine nucleotide synthesis, pyrimidine biosynthesis
  
• 2j4k.pdb. transferase 01-sep-06 2j4k Mg Cd
  Title: crystal structure of uridylate kinase from sulfolobus solfataricus in complex with ump to 2.2 angstrom resolution
  Author: k. s. jensen, e. johansson, k. f. jensen
  Keywords: pyrimidine biosynthesis, kinase, ump kinase, transferase, nucleoside monophosphate kinase, pyrimidine nucleotide synthesis
  
• 2j4l.pdb. transferase 01-sep-06 2j4l Mg
  Title: crystal structure of uridylate kinase from sulfolobus solfataricus in complex with utp to 2.8 angstrom resolution
  Author: k. s. jensen, e. johansson, k. f. jensen
  Keywords: nucleoside monophosphate kinase, pyrimidine nucleotide synthesis, aspartokinase fold, transferase
  
• 2j5e.pdb. transferase 14-sep-06 2j5e Cl
  Title: crystal structure of egfr kinase domain in complex with an irreversible inhibitor 13-jab
  Author: c. -h. yun, m. j. eck
  Keywords: nucleotide-binding, alternative splicing, ubl conjugation, phosphorylation, disease mutation, glycoprotein
  
• 2j5f.pdb. transferase 14-sep-06 2j5f Br
  Title: crystal structure of egfr kinase domain in complex with an irreversible inhibitor 34-jab
  Author: c. -h. yun, m. j. eck
  Keywords: nucleotide-binding, alternative splicing, ubl conjugation, phosphorylation, disease mutation, glycoprotein
  
• 2j7u.pdb. viral protein 17-oct-06 2j7u Cl Mg Zn
  Title: dengue virus ns5 rna dependent rna polymerase domain
  Author: t. l. yap, t. xu, y. l. chen, h. malet, m. p. egloff, b. canard, s. g. vasudevan, j. lescar
  Keywords: rna-dependent rna polymerase, dengue, flavivirus, high-throughput assay, viral protein
  
• 2j7w.pdb. viral protein 17-oct-06 2j7w Zn
  Title: dengue virus ns5 rna dependent rna polymerase domain complexed with 3'dgtp
  Author: t. l. yap, t. xu, y. l. chen, h. malet, m. p. egloff, b. canard, s. g. vasudevan, j. lescar
  Keywords: rna-dependent rna polymerase, dengue, flavivirus, high-throughput assay, viral protein
  
• 2jac.pdb. glutaredoxin 27-nov-06 2jac
  Title: glutaredoxin grx1p c30s mutant from yeast
  Author: k. o. hakansson, j. r. winther
  Keywords: redox-active center, transport, glutathione, glutaredoxin
  
• 2jad.pdb. electron transport 27-nov-06 2jad
  Title: yellow fluorescent protein - glutaredoxin fusion protein
  Author: k. o. hakansson, j. r. winther
  Keywords: electron transport, redox-active center, yeast, grx1p, transport, glutaredoxin
  
• 2jam.pdb. transferase 29-nov-06 2jam Cl Ca
  Title: crystal structure of human calmodulin-dependent protein kinase i g
  Author: j. e. debreczeni, a. bullock, t. keates, f. h. niesen, e. salah, l. shrestha, c. smee, f. sobott, a. c. w. pike, g. bunkoczi, f. von delft, a. turnbull, j. weigelt, c. h. arrowsmith, a. edwards, m. sundstrom, s. knapp
  Keywords: nucleotide-binding, transferase, lipoprotein, polymorphism, golgi apparatus, phosphorylation, allosteric enzyme
  
• 2jbl.pdb. electron transport 08-dec-06 2jbl Mg Fe
  Title: photosynthetic reaction center from blastochloris viridis
  Author: c. r. d. lancaster
  Keywords: photosynthetic reaction center
  
• 2jbw.pdb. hydrolase 14-dec-06 2jbw Na Se
  Title: crystal structure of the 2,6-dihydroxy-pseudo-oxynicotine hydrolase.
  Author: c. schleberger, p. sachelaru, r. brandsch, g. e. schulz
  Keywords: meta-cleavage pathway, retro- friedel-crafts acylation, nicotine degradation, hypothetical protein, plasmid, catalytic triad, c-c bond cleavage
  
• 2jc0.pdb. hydrolase 18-dec-06 2jc0 F
  Title: crystal structure of hepatitis c virus polymerase in complex with inhibitor sb655264
  Author: a. wonacott, t. skarzynski, o. m. singh
  Keywords: polymerase, hydrolase
  
• 2jc1.pdb. hydrolase 18-dec-06 2jc1
  Title: crystal structure of hepatitis c virus polymerase in complex with inhibitor sb698223
  Author: a. wonacott, t. skarzynski, o. m. singh
  Keywords: polymerase, hydrolase
  
• 2jcb.pdb. ligase 21-dec-06 2jcb Mg
  Title: the crystal structure of 5-formyl-tetrahydrofolate cycloligase from bacillus anthracis (ba4489)
  Author: c. meier, l. g. carter, g. winter, r. j. owens, d. i. stuart, r. m. esnouf, oxford protein production facility (oppf), structural proteomics in europe (spine)
  Keywords: oppf structural proteomics in europe (spine)
  
• 2jdi.pdb. hydrolase 09-jan-07 2jdi Mg
  Title: ground state structure of f1-atpase from bovine heart mitochondria (bovine f1-atpase crystallised in the absence of azide)
  Author: m. w. bowler, m. g. montgomery, a. g. w. leslie, j. e. walker
  Keywords: atp phosphorylase, azide, p-loop, bovine, f1-atpase, hydrolase, atp phosphorylase (h+ transporting), atp-binding, atp synthase, mitochondria, atp synthesis
  
• 2jdo.pdb. transferase 11-jan-07 2jdo Cl
  Title: structure of pkb-beta (akt2) complexed with isoquinoline-5- sulfonic acid (2-(2-(4-chlorobenzyloxy) ethylamino)ethyl) amide
  Author: t. g. davies, m. l. verdonk, b. graham, s. saalau-bethell, c. c. f. hamlett, t. mchardy, i. collins, m. d. garrett, p. workman, s. j. woodhead, h. jhoti, d. barford
  Keywords: serine/threonine-protein kinase, kinase, transferase, atp-binding, phosphorylation, nucleotide-binding, alternative splicing
  
• 2jdq.pdb. protein transport 11-jan-07 2jdq
  Title: c-terminal domain of influenza a virus polymerase pb2 subunit in complex with human importin alpha5
  Author: f. tarendeau, d. guilligay, p. mas, s. boulo, f. baudin, r. w. h. ruigrok, d. j. hart, s. cusack
  Keywords: host-virus interaction
  
• 2jdr.pdb. transferase 12-jan-07 2jdr
  Title: structure of pkb-beta (akt2) complexed with the inhibitor a- 443654
  Author: t. g. davies, m. l. verdonk, b. graham, s. saalau-bethell, c. c. f. hamlett, t. mchardy, i. collins, m. d. garrett, p. workman, s. j. woodhead, h. jhoti, d. barford
  Keywords: serine/threonine-protein kinase, kinase, transferase, atp-binding, phosphorylation, nucleotide-binding, alternative splicing
  
• 2jds.pdb. transferase 12-jan-07 2jds
  Title: structure of camp-dependent protein kinase complexed with a- 443654
  Author: t. g. davies, m. l. verdonk, b. graham, s. saalau-bethell, c. c. f. hamlett, t. mchardy, i. collins, m. d. garrett, p. workman, s. j. woodhead, h. jhoti, d. barford
  Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation
  
• 2jdt.pdb. transferase 12-jan-07 2jdt Cl
  Title: structure of pka-pkb chimera complexed with isoquinoline-5- sulfonic acid (2-(2-(4-chlorobenzyloxy) ethylamino)ethyl) amide
  Author: t. g. davies, m. l. verdonk, b. graham, s. saalau-bethell, c. c. f. hamlett, t. mchardy, i. collins, m. d. garrett, p. workman, s. j. woodhead, h. jhoti, d. barford
  Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation
  
• 2jdv.pdb. transferase 12-jan-07 2jdv
  Title: structure of pka-pkb chimera complexed with a-443654
  Author: t. g. davies, m. l. verdonk, b. graham, s. saalau-bethell, c. c. f. hamlett, t. mchardy, i. collins, m. d. garrett, p. workman, s. j. woodhead, h. jhoti, d. barford
  Keywords: kinase, myristate, transferase, lipoprotein, serine/threonine-protein kinase, nucleotide-binding, protein kinase inhibitor, atp-binding, nuclear protein, phosphorylation
  
• 2jef.pdb. transferase 17-jan-07 2jef Ca
  Title: the molecular basis of selectivity of nucleotide triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus dna polymerase iv: steady-state and pre-steady-state and x-ray crystallography of correct and incorrect pairing
  Author: r. l. eoff, k. c. angel, i. d. kosekov, m. egli, f. p. guengerich
  Keywords: dna-binding, metal-binding
  
• 2jeg.pdb. transferase 17-jan-07 2jeg Ca
  Title: the molecular basis of selectivity of nucleoside triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus dna polymerase iv: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing
  Author: r. l. eoff, k. c. angel, i. d. kosekov, m. egli, f. p. guengerich
  Keywords: dna-binding, metal-binding
  
• 2jei.pdb. transferase 17-jan-07 2jei Ca
  Title: the molecular basis of selectivity of nucleoside triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus dna polymerase iv: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing
  Author: r. l. eoff, k. c. angel, i. d. kosekov, m. egli, f. p. guengerich
  Keywords: dna-binding, metal-binding
  
• 2jej.pdb. transferase 17-jan-07 2jej Ca
  Title: the molecular basis of selectivity of nucleoside triphosphate incorporation opposite o6-benzylguanine by sulfolobus solfataricus dna polymerase iv: steady-state and pre-steady-state kinetics and x-ray crystallography of correct and incorrect pairing
  Author: r. l. eoff, k. c. angel, i. d. kosekov, m. egli, f. p. guengerich
  Keywords: dna-binding, metal-binding
  
• 2jfk.pdb. transferase 02-feb-07 2jfk
  Title: structure of the mat domain of human fas with malonyl-coa
  Author: g. bunkoczi, k. kavanagh, v. hozjan, a. rojkova, s. watt, x. wu, c. h. arrowsmith, a. edwards, m. sundstrom, j. weigelt, s. smith, u. oppermann
  Keywords: fatty acid biosynthesis, nad, nadp, lyase, hydrolase, mat domain, acetylation
  
• 2jmo.pdb. ligase 24-nov-06 2jmo Zn (NMR, 20 structures)
  Title: ibr domain of human parkin
  Author: s. a. beasley, v. a. hristova, g. s. shaw
  Keywords: ibr, e3 ligase, zinc binding domain, rbr
  
• 2jnc.pdb. ligand binding protein 08-jan-07 2jnc (NMR, 20 structures)
  Title: refined 3d nmr structure of ecd1 of mcrf-r2beta at ph 5
  Author: g. c. r. royappa, m. h. perrin, g. jozsef, m. r. digruccio, j. p. cantle, j. e. rivier, w. w. vale, r. riek
  Keywords: elliptical b-sandwich
  
• 2jnd.pdb. ligand binding protein 08-jan-07 2jnd (NMR, 19 structures)
  Title: 3d nmr structure of ecd1 of mcrf-r2b in complex with astressin
  Author: g. c. r. royappa, m. h. perrin, g. jozsef, m. r. digruccio, j. p. cantle, j. e. rivier, w. w. vale, r. riek
  Keywords: alpha-helix, beta-sheets
  
• 2nms.pdb. immune system 23-oct-06 2nms
  Title: the crystal structure of the extracellular domain of the inhibitor receptor expressed on myeloid cells irem-1
  Author: n. dimasi, j. a. marquez
  Keywords: ig-v, nkp44-like, myeloid ig-like receptor, inhibitory receptor, myelo-monocytic cells, negative regulation of leukocyte, membrane protein
  
• 2nmw.pdb. hydrolase 23-oct-06 2nmw
  Title: crystal structure analysis of hiv-1 protease with a inhibitor saquinavir
  Author: y. tie, a. y. kovalevsky, p. boross, y. f. wang, a. k. ghosh, j. tozser, r. w. harrison, i. t. weber
  Keywords: mutant, dimer, inhibitor, saquinavir
  
• 2nmy.pdb. hydrolase 23-oct-06 2nmy Cl Na
  Title: crystal structure analysis of hiv-1 protease mutant v82a with a inhibitor saquinavir
  Author: y. tie, a. y. kovalevsky, p. boross, y. f. wang, a. k. ghosh, j. tozser, r. w. harrison, i. t. weber
  Keywords: mutant, v82a, dimer, inhibitor, saquinavir
  
• 2nmz.pdb. hydrolase 23-oct-06 2nmz
  Title: crystal structure analysis of hiv-1 protease mutant v82a with a inhibitor saquinavir
  Author: y. tie, a. y. kovalevsky, p. boross, y. f. wang, a. k. ghosh, j. tozser, r. w. harrison, i. t. weber
  Keywords: mutant, v82a, dimer, inhibitor, saquinavir
  
• 2nnc.pdb. ligand binding protein 24-oct-06 2nnc Cl
  Title: structure of the sulfur carrier protein soxy from chlorobium limicola f thiosulfatophilum
  Author: j. stout, g. van driessche, s. n. savvides, j. van beeumen
  Keywords: soxy, beta sandwich, green sulfur bacterium
  
• 2nnf.pdb. ligand binding protein 24-oct-06 2nnf
  Title: structure of the sulfur carrier protein soxy from chlorobium limicola f thiosulfatophilum
  Author: j. stout, g. van driessche, s. n. savvides, j. van beeumen
  Keywords: sox, beta sandwich, green sulfur bacterium
  
• 2nnk.pdb. hydrolase 24-oct-06 2nnk Cl Na
  Title: crystal structure analysis of hiv-1 protease mutant i84v with a inhibitor saquinavir
  Author: y. tie, a. y. kovalevsky, p. boross, y. f. wang, a. k. ghosh, j. tozser, r. w. harrison, i. t. weber
  Keywords: mutant, i84v, dimer, inhibitor, saquinavir
  
• 2nnp.pdb. hydrolase 24-oct-06 2nnp
  Title: crystal structure analysis of hiv-1 protease mutant i84v with a inhibitor saquinavir
  Author: y. tie, a. y. kovalevsky, p. boross, y. f. wang, a. k. ghosh, j. tozser, r. w. harrison, i. t. weber
  Keywords: mutant, i84v, dimer, inhibitor, saquinavir
  
• 2noc.pdb. structural genomics, unknown function 25-oct-06 2noc (NMR, 20 structures)
  Title: solution structure of putative periplasmic protein: northest structural genomics target str106
  Author: q. zhang, g. liu, h. wang, c. nwosu, k. cunningham, l. c. ma, r. xiao, j. liu, m. c. baran, g. v. t. swapna, b. a. thomas, b. rost, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
  Keywords: str106, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2npl.pdb. cell adhesion 27-oct-06 2npl (NMR, minimized average structure)
  Title: nmr structure of card d2 domain
  Author: s. jiang, m. caffrey
  
  
• 2nt3.pdb. signaling protein 06-nov-06 2nt3
  Title: receiver domain from myxococcus xanthus social motility protein frzs (y102a mutant)
  Author: j. s. fraser, n. e. echols, j. p. merlie, d. r. zusman, t. alber
  Keywords: receiver domain, signalling
  
• 2nt4.pdb. signaling protein 06-nov-06 2nt4 Cl
  Title: receiver domain from myxococcus xanthus social motility protein frzs (h92f mutant)
  Author: n. echols, j. fraser, s. weisfield, j. merlie, d. zusman, t. alber
  Keywords: signaling, receiver domain, two-component
  
• 2nx9.pdb. lyase 17-nov-06 2nx9 Zn
  Title: crystal structure of the carboxyltransferase domain of the oxaloacetate decarboxylase na+ pump from vibrio cholerae
  Author: r. studer, p. dimroth
  Keywords: carboxyltransferase structure, biotin enzymes, zn2+ binding site, tim-barrel fold
  
• 2o26.pdb. cytokine/signaling protein 29-nov-06 2o26
  Title: structure of a class iii rtk signaling assembly
  Author: h. liu, x. chen, p. j. focia, x. he
  Keywords: receptor tyrosine kinase, class iii, receptor/ligand complex, growth factor, cytokine, 4-helix bundle
  
• 2o27.pdb. cytokine, signaling protein 29-nov-06 2o27
  Title: structure of a class iii rtk signaling assembly
  Author: h. liu, x. chen, p. focia, x. he
  Keywords: receptor tyrosine kinase, class iii, receptor/ligand complex, growth factor, cytokine, 4-helix bundle
  
• 2o2s.pdb. oxidoreductase 30-nov-06 2o2s Cl
  Title: the structure of t. gondii enoyl acyl carrier protein reductase in complex with nad and triclosan
  Author: s. p. muench, s. t. prigge, r. mcleod, j. b. rafferty, m. j. kirisits, c. w. roberts, e. j. mui, d. w. rice
  Keywords: triclosan, rossmann fold
  
• 2o2y.pdb. oxidoreductase 30-nov-06 2o2y Cl
  Title: the crystal structure of p. falciparum enoyl acyl carrier protein reductase
  Author: s. p. muench, s. t. prigge, r. mcleod, j. b. rafferty, m. j. kirisits, c. w. roberts, e. j. mui, d. w. rice
  Keywords: rossmann fold, triclosan binding
  
• 2o4g.pdb. hydrolase 04-dec-06 2o4g Mg
  Title: structure of trex1 in complex with a nucleotide
  Author: m. brucet, m. j. macias, i. fita, a. celada
  Keywords: exonuclease, dnaq, dna complex, ww motif, protein- protein interaction, polyproline binding motif
  
• 2o4i.pdb. hydrolase/dna 04-dec-06 2o4i
  Title: structure of trex1 in complex with dna
  Author: m. brucet, m. j. macias, i. fita, a. celada
  Keywords: exonuclease, dnaq, dna complex, ww motif, protein- protein interaction, polyproline binding motif
  
• 2o50.pdb. oxidoreductase 05-dec-06 2o50 Se
  Title: the crystal structure of toxoplasma gondii enoyl acyl carrier protein reductase
  Author: s. p. muench, s. t. prigge, r. mcleod, j. b. rafferty, d. w. rice
  Keywords: rossmann fold
  
• 2o97.pdb. dna binding protein 13-dec-06 2o97 Cl Ni
  Title: crystal structure of e. coli hu heterodimer
  Author: f. guo, s. adhya
  Keywords: heterodimer, dna structure, dna supercoiling, e. coli
  
• 2o9x.pdb. structural genomics, unknown function 14-dec-06 2o9x Se
  Title: crystal structure of a putative redox enzyme maturation protein from archaeoglobus fulgidus
  Author: o. kirillova, m. chruszcz, t. skarina, e. gorodichtchenskaia, m. cymborowski, i. shumilin, a. savchenko, a. edwards, w. minor, midwest center for structural genomics (mcsg)
  Keywords: ramp, helical protein, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2odc.pdb. membrane protein 22-dec-06 2odc (NMR, minimized average structure)
  Title: lem-domain of the nuclear envelope protein emerin
  Author: g. m. clore, m. cai
  Keywords: lem-domain multidimensional nmr dipolar couplings
  
• 2odg.pdb. membrane protein, protein binding 22-dec-06 2odg (NMR)
  Title: complex of barrier-to-autointegration factor and lem-domain of emerin
  Author: g. m. clore, m. cai
  Keywords: lem-domain baf multidimensional nmr dipolar couplings
  
• 2odp.pdb. hydrolase 25-dec-06 2odp Mg
  Title: complement component c2a, the catalytic fragment of c3- and c5-convertase of human complement
  Author: s. v. l. narayana, v. krishnan
  Keywords: c3/c5 convertase, complement serine protease, human complement system, glycoprotein, sp, vwfa
  
• 2odq.pdb. hydrolase 25-dec-06 2odq
  Title: complement component c2a, the catalytic fragment of c3- and c5-convertase of human complement
  Author: s. v. l. narayana, v. krishnan
  Keywords: c3/c5 convertase, complement serine protease, human complement system, glycoprotein, sp, vwfa
  
• 2odu.pdb. structural protein 27-dec-06 2odu
  
  Author: j. m. de pereda
  Keywords: spectrin repeat, cytoskeleton, hemidesmosomes, epidermolysis bullosa
  
• 2odv.pdb. structural protein 27-dec-06 2odv
  
  Author: j. m. de pereda
  Keywords: spectrin repeat, cytoskeleton, hemidesmosomes, epidermolysis bullosa
  
• 2of0.pdb. hydrolase 02-jan-07 2of0 I
  Title: x-ray crystal structure of beta secretase complexed with compound 5
  Author: s. patel
  Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
  
• 2of3.pdb. structural protein, cell cycle 02-jan-07 2of3
  Title: tog domain structure from c.elegans zyg9
  Author: j. al-bassam, n. a. larsen, a. a. hyman, s. c. harrison
  Keywords: kinetochore, microtubule, xmap215, zyg9, stu2, dis1, microtubule associated protein
  
• 2og0.pdb. dna binding protein/dna 04-jan-07 2og0
  Title: crystal structure of the lambda xis-dna complex
  Author: c. v. papagiannis, m. d. sam, m. a. abbani, d. cascio, d. yoo, r. t. clubb, r. c. johnson
  Keywords: dna architectural protein, 'winged'helix protein, phage excision, site-specific recombination recombination
  
• 2og4.pdb. protein binding 05-jan-07 2og4
  Title: structure of an expanded jab1-mpn-like domain of splicing factor prp8p from yeast
  Author: v. pena, s. liu, r. luehrmann, m. c. wahl
  Keywords: jab1/mpn domain, pre-mrna splicing, protein- protein interaction, prp8p, pseudoenzyme, spliceosome activation, u5-200k protein, x-ray crystallography
  
• 2ogs.pdb. hydrolase 08-jan-07 2ogs I
  Title: crystal structure of the geobacillus stearothermophilus carboxylesterase est55 at ph 6.2
  Author: p. liu, h. e. ewis, p. c. tai, c. d. lu, i. t. weber
  Keywords: alpha/beta hydrolase
  
• 2ogt.pdb. hydrolase 08-jan-07 2ogt I
  Title: crystal structure of the geobacillus stearothermophilus carboxylesterase est55 at ph 6.8
  Author: p. liu, h. e. ewis, p. c. tai, c. d. lu, i. t. weber
  Keywords: alpha/beta hydrolase
  
• 2ohk.pdb. hydrolase 10-jan-07 2ohk I
  Title: x-ray crystal structure of beta secretase complexed with 1- amino-isoquinoline
  Author: s. patel
  Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
  
• 2ohl.pdb. hydrolase 10-jan-07 2ohl I
  Title: x-ray crystal structure of beta secretase complexed with 2- aminoquinoline
  Author: s. patel
  Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
  
• 2ohm.pdb. hydrolase 10-jan-07 2ohm I
  Title: x-ray crystal structure of beta secretase complexed with n~3~-benzylpyridine-2,3-diamine
  Author: s. patel
  Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
  
• 2ohn.pdb. hydrolase 10-jan-07 2ohn F I
  Title: x-ray crystal structure of beta secretase complexed with 4- (4-fluorobenzyl)piperidine
  Author: s. patel
  Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
  
• 2ohq.pdb. hydrolase 10-jan-07 2ohq I
  Title: x-ray crystal structure of beta secretase complexed with compound 4
  Author: s. patel
  Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
  
• 2ohr.pdb. hydrolase 10-jan-07 2ohr I
  Title: x-ray crystal structure of beta secretase complexed with compound 6a
  Author: s. patel
  Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
  
• 2ohs.pdb. hydrolase 10-jan-07 2ohs I
  Title: x-ray crystal structure of beta secretase complexed with compound 6b
  Author: s. patel
  Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
  
• 2oht.pdb. hydrolase 10-jan-07 2oht I
  Title: x-ray crystal structure of beta secretase complexed with compound 7
  Author: s. patel
  Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
  
• 2ohu.pdb. hydrolase 10-jan-07 2ohu I
  Title: x-ray crystal structure of beta secretase complexed with compound 8b
  Author: s. patel
  Keywords: alzheimer's disease, aspartic protease, aspartyl protease, base, beta-secretase, glycoprotein, hydrolase, memapsin 2, signal, transmembrane, zymogen
  
• 2oiu.pdb. ribonucleic acid 11-jan-07 2oiu Mg
  Title: l1 ribozyme ligase circular adduct
  Author: m. p robertson, w. g. scott
  Keywords: ribozyme, in vitro selection, rna, active site
  
• 2ojw.pdb. ligase 15-jan-07 2ojw Cl Mn
  Title: crystal structure of human glutamine synthetase in complex with adp and phosphate
  Author: t. karlberg, j. uppenberg, c. arrowsmith, h. berglund, r. d. busam, r. collins, a. edwards, s. flodin, a. flores, s. graslund, b. m. hallberg, m. hammarstrom, m. hogbom, i. johansson, t. kotenyova, m. moche, m. e. nilsson, p. nordlund, t. nyman, d. ogg, c. persson, j. sagemark, p. stenmark, m. sundstrom, a. g. thorsell, s. van den berg, k. wallden, j. weigelt, l. holmberg-schiavone, structural genomics consortium (sgc)
  Keywords: ligase, synthetase, structural genomics, structural genomics consortium, sgc
  
• 2ok7.pdb. oxidoreductase 16-jan-07 2ok7 Na
  Title: ferredoxin-nadp+ reductase from plasmodium falciparum with 2'p-amp
  Author: m. milani, e. mastrangelo, m. bolognesi
  
  
• 2ok8.pdb. oxidoreductase 16-jan-07 2ok8
  Title: ferredoxin-nadp+ reductase from plasmodium falciparum
  Author: m. mario, e. mastrangelo, m. bolognesi
  
  
• 2ol2.pdb. hydrolase inhibitor 18-jan-07 2ol2
  Title: high resolution structure of native pci in space group p21
  Author: w. li, j. a. huntington
  
  
• 2olv.pdb. transferase 19-jan-07 2olv Se
  Title: structural insight into the transglycosylation step of bacterial cell wall biosynthesis : donor ligand complex
  Author: a. l. lovering, l. de castro, d. lim, n. c. j. strynadka
  Keywords: glycosyltransferase family 51, lysozyme fold
  
• 2olw.pdb. isomerase 19-jan-07 2olw
  Title: crystal structure of e. coli pseudouridine synthase rlue
  Author: h. pan, j. d. ho, r. m. stroud, j. finer-moore
  
  
• 2oml.pdb. isomerase 22-jan-07 2oml
  Title: crystal structure of e. coli pseudouridine synthase rlue
  Author: h. pan, j. d. ho, r. m. stroud, j. finer-moore
  Keywords: thrombin-cleaved
  
• 2onj.pdb. hydrolase 24-jan-07 2onj Na
  Title: structure of the multidrug abc transporter sav1866 from s. aureus in complex with amp-pnp
  Author: r. j. p. dawson, k. p. locher
  Keywords: transport protein
  
• 2onk.pdb. membrane protein 24-jan-07 2onk Mg W
  Title: abc transporter modbc in complex with its binding protein moda
  Author: k. hollenstein, d. c. frei, k. p. locher
  
  
• 2oo5.pdb. oxidoreductase 25-jan-07 2oo5
  Title: structure of transhydrogenase (di.h2nadh)2(diii.nadp+)1 asymmetric complex
  Author: t. bhakta, j. b. jackson
  
  
• 2oor.pdb. oxidoreductase 26-jan-07 2oor
  Title: structure of transhydrogenase (di.nad+)2(diii.h2nadph)1 asymmetric complex
  Author: t. bhakta, jackson j. b.
  
  
• 2oq6.pdb. oxidoreductase 31-jan-07 2oq6 Zn Ni
  Title: crystal structure of jmjd2a complexed with histone h3 peptide trimethylated at lys9
  Author: e. s. pilka, s. s. ng, k. l. kavanagh, m. a. mcdonough, p. savitsky, f. von delft, c. h. arrowsmith, j. weigelt, a. edwards, m. sundstrom, c. j. schofield, u. oppermann, structural genomics consortium (sgc)
  Keywords: demethylase, oxygenase, sgc, structural genomics, structural genomics consortium
  
• 2oq7.pdb. oxidoreductase 31-jan-07 2oq7 Zn Ni
  Title: the crystal structure of jmjd2a complexed with ni and n- oxalylglycine
  Author: k. l. kavanagh, s. s. ng, e. pilka, m. a. mcdonough, p. savitsky, f. von delft, c. h. arrowsmith, j. weigelt, a. edwards, m. sundstrom, c. j. schofield, u. oppermann, structural genomics consortium (sgc)
  Keywords: double-stranded beta helix, demethylase, oxygenase, structural genomics, structural genomics consortium, sgc
  
• 2oqo.pdb. transferase 31-jan-07 2oqo
  Title: crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis
  Author: y. yuan, p. sliz, s. walker
  
  
• 2os2.pdb. oxidoreductase 05-feb-07 2os2 Zn Ni
  Title: crystal structure of jmjd2a complexed with histone h3 peptide trimethylated at lys36
  Author: k. l. kavanagh, s. s. ng, e. pilka, m. a. mcdonough, p. savitsky, f. von delft, c. h. arrowsmith, j. weigelt, a. edwards, m. sundstrom, c. j. schofield, u. oppermann, structural genomics consortium (sgc)
  Keywords: double-stranded beta helix, demethylase, oxygenase, structural genomics, structural genomics consortium, sgc
  
• 2ot6.pdb. plant protein 07-feb-07 2ot6
  Title: crystal structure of a bowman-birk inhibitor from vigna unguiculata seeds
  Author: k. n. rao, c. g. suresh
  Keywords: vigna unguiculata,plant-pis, protein-protein interactions
  
• 2ot7.pdb. oxidoreductase 07-feb-07 2ot7 Zn Ni
  Title: crystal structure of jmjd2a complexed with histone h3 peptide monomethylated at lys9
  Author: k. l. kavanagh, s. s. ng, e. pilka, m. a. mcdonough, p. savitsky, f. von delft, c. h. arrowsmith, j. weigelt, a. edwards, m. sundstrom, c. j. schofield, u. oppermann, structural genomics consortium (sgc)
  Keywords: double-stranded beta helix, demethylase, oxygenase, structural genomics, structural genomics consortium, sgc
  
• 2ot9.pdb. structural genomics, unknown function 07-feb-07 2ot9 Na Se
  Title: crystal structure of yaeq protein from pseudomonas syringae
  Author: r. wu, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: pseudomonas syringae, psi-2, protein structure initiative, mcsg, structural genomics, midwest center for structural genomics
  
• 2ott.pdb. immune system 09-feb-07 2ott
  Title: crystal structure of cd5_diii
  Author: b. rodamilans
  
  
• 2ov2.pdb. protein binding/transferase 12-feb-07 2ov2 Cl Mg
  Title: the crystal structure of the human rac3 in complex with the crib domain of human p21-activated kinase 4 (pak4)
  Author: e. ugochukwu, x. yang, j. m. elkins, n. burgess-brown, g. bunkoczi, j. e. d. debreczeni, m. sundstrom, c. h. arrowsmith, j. weigelt, a. edwards, f. von delft, s. knapp, d. a. doyle, structural genomics consortium (sgc)
  Keywords: small gtp binding protein, p21 rac, ras- related c3 botulinum toxin substrate 3, signalling protein, crib, kinase, structural genomics, structural genomics, structural genomics consortium, sgc
  
• 2ov9.pdb. hydrolase 13-feb-07 2ov9 Se
  Title: crystal structure of protein rha08564, thioesterase superfamily protein
  Author: c. chang, e. evdokimova, m. kudritska, a. savchenko, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: rha08564, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2ovc.pdb. transport protein 13-feb-07 2ovc
  Title: crystal structure of a coiled-coil tetramerization domain from kv7.4 channels
  Author: r. j. howard, k. a. clark, j. m. holton, d. l. minor
  Keywords: potassium channel, ion channel assembly, coiled-coil, tetramer
  
• 2ox0.pdb. oxidoreductase 19-feb-07 2ox0 Cl Zn Ni
  Title: crystal structure of jmjd2a complexed with histone h3 peptide dimethylated at lys9
  Author: e. s. pilka, s. s. ng, k. l. kavanagh, m. a. mcdonough, p. savitsky, f. von delft, c. h. arrowsmith, j. weigelt, a. edwards, m. sundstrom, c. j. schofield, u. oppermann, structural genomics consortium (sgc)
  Keywords: demethylase, oxygenase, sgc, structural genomics, structural genomics consortium
  
• 2oxs.pdb. hydrolase 21-feb-07 2oxs Ca
  Title: crytal structure of the trypsin complex with benzamidine at high temperature (35 c)
  Author: a. alok, m. sinha, n. singh, s. sharma, p. kaur, t. p. singh
  Keywords: benzamidine, high temperature, crystsl structure
  
• 2oxw.pdb. hydrolase 21-feb-07 2oxw Zn Ca
  Title: human mmp-12 complexed with the peptide iag
  Author: v. calderone, i. bertini, m. fragai, c. luchinat, m. maletta, k. j. yeo
  Keywords: matrix metalloproteinase
  
• 2oyc.pdb. hydrolase 21-feb-07 2oyc W Na Se
  Title: crystal structure of human pyridoxal phosphate phosphatase
  Author: u. a. ramagopal, j. freeman, m. izuka, r. toro, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: structural genomics, nysgxrc, new york structural genomix research consortium, nysgxrc, psi-2, protein structure initiative
  
• 2oz8.pdb. structural genomics, unknown function 25-feb-07 2oz8
  Title: crystal structure of putative mandelate racemase from mesorhizobium loti
  Author: j. b. bonanno, j. freeman, k. t. bain, b. wu, v. sridhar, d. smith, s. wasserman, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: unknown function, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2ozf.pdb. protein binding 26-feb-07 2ozf
  Title: the crystal structure of the 2nd pdz domain of the human nherf-1 (slc9a3r1)
  Author: c. phillips, e. papagrigoriou, c. gileadi, o. fedorov, j. elkins, g. berridge, a. p. turnbull, o. gileadi, g. schoch, c. smee, j. bray, p. savitsky, j. uppenberg, f. von delft, f. gorrec, c. umeano, e. salah, s. colebrook, j. weigelt, c. h. arrowsmith, a. edwards, m. sundstrom, d. a. doyle, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc
  
• 2ozg.pdb. transferase 26-feb-07 2ozg Se
  Title: crystal structure of gcn5-related n-acetyltransferase (yp_325469.1) from anabaena variabilis atcc 29413 at 2.00 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: gcn5-related n-acetyltransferase, acetyltransferase (gnat) family, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2ozt.pdb. lyase 27-feb-07 2ozt Na Se
  Title: crystal structure of o-succinylbenzoate synthase from thermosynechococcus elongatus bp-1
  Author: v. n. malashkevich, j. bonanno, r. toro, j. m. sauder, k. d. schwinn, k. t. bain, j. m. adams, c. reyes, i. rooney, t. gheyi, s. r. wasserman, s. emtage, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: o-succinylbenzoate synthase, psi, protein structure initiative, new york structural genomics research consortium, nysgrc, new york structural genomix research consortium, nysgxrc
  
• 2ozu.pdb. transferase 27-feb-07 2ozu Zn
  Title: crystal structure of human myst histone acetyltransferase 3 in complex with acetylcoenzyme a
  Author: j. min, h. wu, l. dombrovski, g. bernstein, a. dong, p. loppnau, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc
  
• 2p02.pdb. transferase 28-feb-07 2p02 Cl
  Title: crystal structure of the alpha subunit of human s- adenosylmethionine synthetase 2
  Author: e. papagrigoriou, n. shafqat, a. rojkova, f. h. niessen, k. l. kavanagh, f. von delft, f. gorrec, e. ugochukwu, c. h. arrowsmith, a. edwards, j. weigelt, m. sundstrom, u. oppermann, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc
  
• 2p0i.pdb. lyase 28-feb-07 2p0i Se
  Title: crystal structure of l-rhamnonate dehydratase from gibberella zeae
  Author: y. patskovsky, r. toro, j. m. sauder, m. dickey, c. logan, t. gheyi, s. r. wasserman, d. smith, j. gerlt, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: structural genomics, psi, protein structure initiative, new york structural genomics research consortium, nysgrc, new york structural genomix research consortium, nysgxrc
  
• 2p0u.pdb. transferase 01-mar-07 2p0u Ni
  Title: crystal structure of marchantia polymorpha stilbenecarboxylate synthase 2 (stcs2)
  Author: f. borel, g. schroeder, j. schroeder, j. -l. ferrer
  Keywords: stilbenecarboxylate synthase, pks type iii
  
• 2p0w.pdb. transferase 01-mar-07 2p0w Cl
  Title: human histone acetyltransferase 1 (hat1)
  Author: h. wu, j. min, h. zeng, p. loppnau, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc
  
• 2p1l.pdb. apoptosis 05-mar-07 2p1l
  Title: structure of the bcl-xl:beclin 1 complex
  Author: p. d. jeffrey, y. shi, a. l. oberstein
  
  
• 2p27.pdb. hydrolase 07-mar-07 2p27 Mg Se
  Title: crystal structure of human pyridoxal phosphate phosphatase with mg2+ at 1.9 a resolution
  Author: u. a. ramagopal, j. freeman, m. izuka, r. toro, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: structural genomics, nysgxrc, new york structural genomics research consortium, nysgrc, new york structural genomix research consortium, nysgxrc, psi-2, protein structure initiative