Recent PDB releases or updates: week of 9 February 2007

• 1e6g.pdb. sh3-domain 15-aug-00 1e6g
  Title: a-spectrin sh3 domain a11v, v23l, m25i, v53i, v58l mutant
  Author: m. c. vega, l. serrano
  Keywords: cytoskeleton, calmodulin-binding, actin-binding
  
• 1e6h.pdb. sh3-domain 17-aug-00 1e6h
  Title: a-spectrin sh3 domain a11v, m25i, v44i, v58l mutants
  Author: m. c. vega, l. serrano
  Keywords: cytoskeleton, calmodulin-binding, actin-binding
  
• 1hff.pdb. chemokine 01-dec-00 1hff (NMR, 55 structures)
  Title: nmr solution structures of the vmip-ii 1-10 peptide from kaposi's sarcoma-associated herpesvirus.
  Author: m. p. crump, e. elisseeva, j. h. gong, i. clark-lewis, b. d. sykes
  Keywords: cxcr4, anatagonist, vmip-ii
  
• 1vbk.pdb. structural genomics, unknown function 27-feb-04 1vbk
  Title: crystal structure of ph1313 from pyrococcus horikoshii ot3
  Author: m. sugahara, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, riken structural genomics/proteomics initiative, rsgi, nppsfa, national project on protein structural and functional analyses
  
• 2bv8.pdb. photosynthesis 04-oct-04 2bv8
  Title: the crystal structure of phycocyanin from gracilaria chilensis.
  Author: c. contreras-martel, j. martinez-oyanedel, g. poo-caama, c. bruna, m. bunster
  Keywords: phycobilisome, phycobiliprotein, phycocyanin, phycocyanobilin, photosynthesis, chloroplast
  
• 2bzg.pdb. transferase 16-aug-05 2bzg Se
  Title: crystal structure of thiopurine s-methyltransferase.
  Author: k. p. battaile, h. wu, h. zeng, p. loppnau, a. dong, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
  Keywords: polymorphism, transferase, psi, protein structure initiative, structural genomics consortium (sgc)
  
• 2c0c.pdb. oxidoreductase 30-aug-05 2c0c
  Title: structure of the mgc45594 gene product
  Author: g. bunkoczi, n. shafqat, k. guo, c. smee, c. arrowsmith, a. edwards, j. weigelt, m. sundstrom, o. gileadi, f. von delft, u. oppermann
  Keywords: medium-chain dehydrogenase/reductase
  
• 2c6u.pdb. lectin 11-nov-05 2c6u
  Title: crystal structure of human clec-2 (clec1b)
  Author: a. a. watson, j. brown, c. a. o'callaghan
  Keywords: rhodocytin, aggretin, c-type lectin-like, platelets, thrombosis, clec1b
  
• 2c8t.pdb. hydrolase 06-dec-05 2c8t
  Title: the 3.0 a resolution structure of caseinolytic clp protease 1 from mycobacterium tuberculosis
  Author: h. ingvarsson, m. hogbom, t. a. jones, t. unge
  Keywords: protease, serine protease, clpp1, tetradecamer, hydrolase
  
• 2cby.pdb. hydrolase 10-jan-06 2cby
  Title: crystal structure of the atp-dependent clp protease proteolytic subunit 1 (clpp1) from mycobacterium tuberculosis
  Author: m. j. mate, d. portnoi, p. m. alzari, m. ortiz-lombardia
  Keywords: clp protease, proteolytic subunit, endopeptidase, mycobacterium tuberculosis, atp-dependent protease, hydrolase
  
• 2ce3.pdb. hydrolase 01-feb-06 2ce3
  Title: crystal structure of the atp-dependent clp protease proteolytic subunit 1 (clpp1) from mycobacterium tuberculosis
  Author: b. segelke, c. y. kim, m. ortiz-lombardia, p. m. alzari, t. lekin
  Keywords: clp protease, proteolytic subunit, endopeptidase, mycobacterium tuberculosis, atp-dependent protease, hydrolase
  
• 2cgn.pdb. oxidoreductase 09-mar-06 2cgn Fe
  Title: factor inhibiting hif-1 alpha with succinate
  Author: m. a. mcdonough, i. j. clifton, c. j. schofield
  Keywords: s-nitrosylation, transcription, transcription activator/inhibitor, transcription regulation
  
• 2cgo.pdb. oxidoreductase 09-mar-06 2cgo Fe
  Title: factor inhibiting hif-1 alpha with fumarate
  Author: m. a. mcdonough, i. j. clifton, c. j. schofield
  Keywords: transcription, transcription activator/inhibitor, transcription regulation, dioxygenase, iron, metal-binding, oxidoreductase
  
• 2cjm.pdb. complex (transferase/cell division) 05-apr-06 2cjm Mg
  Title: mechanism of cdk inhibition by active site phosphorylation: cdk2 y15p t160p in complex with cyclin a structure
  Author: j. p. i. welburn, j. tucker, t. johnson, l. lindert, l. lindert, a. willis, m. e. m. noble, j. a. endicott
  Keywords: complex (transferase/cell division)
  
• 2ckw.pdb. hydrolase 24-apr-06 2ckw
  Title: the 2.3 a resolution structure of the sapporo virus rna dependant rna polymerase.
  Author: s. w. b. fullerton, p. a. tucker, j. rohayem, b. coutard, j. gebhardt, a. gorbalenya, b. canard
  Keywords: transferase, rna-directed rna polymerase, polyprotein, atp-binding, thiol protease
  
• 2cmz.pdb. membrane protein 17-may-06 2cmz Ca
  Title: crystal structure of vsv-indiana (mudd-summers strain) glycoprotein under its acidic conformation
  Author: s. roche, s. bressanelli
  Keywords: lipoprotein, glycoprotein, transmembrane, envelope protein, membrane protein
  
• 2ddk.pdb. hydrolase 30-jan-06 2ddk
  Title: crystal structure of human myo-inositol monophosphatase 2 (impa2) (orthorhombic form)
  Author: r. arai, k. ito, t. kamo-uchikubo, y. bessho, h. ohba, t. ohnishi, t. yoshikawa, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: bipolar disorder, schizophrenia, febrile seizures, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2ddy.pdb. hydrolase 06-feb-06 2ddy Zn Ca (NMR, 25 structures)
  Title: solution structure of matrilysin (mmp-7) complexed to constraint conformational sulfonamide inhibitor
  Author: x. h. zheng, l. ou
  Keywords: matrilysin,complex, mmp-7, solution structure, madw01053
  
• 2dry.pdb. sugar binding protein 16-jun-06 2dry
  Title: crystal structure of the earthworm lectin c-terminal domain mutant
  Author: r. suzuki, z. fujimoto
  Keywords: sialic acid, galactose, in vitro evolution, beta-trefoil fold
  
• 2drz.pdb. sugar binding protein 16-jun-06 2drz
  Title: crystal structure of the earthworm lectin c-terminal domain mutant in complex with lactose
  Author: r. suzuki, z. fujimoto
  Keywords: sialic acid, galactose, in vitro evolution, beta-trefoil fold, sugar complex
  
• 2ds0.pdb. sugar binding protein 16-jun-06 2ds0
  Title: crystal structure of the earthworm lectin c-terminal domain mutant in complex with 6'-sialyllactose
  Author: r. suzuki, z. fujimoto
  Keywords: sialic acid, galactose, in vitro evolution, beta-trefoil fold, sugar complex
  
• 2dsk.pdb. hydrolase 30-jun-06 2dsk
  Title: crystal structure of catalytic domain of hyperthermophilic chitinase from pyrococcus furiosus
  Author: t. nakamura, s. mine, y. hagihara, k. ishikawa, k. uegaki
  Keywords: catalytic domain, active domain, crystalline chitin, tim-barrel
  
• 2dve.pdb. ligase 31-jul-06 2dve
  Title: crystal structure of biotin protein ligase from pyrococcus horikoshii ot3 in complex with biotinyl-5'-amp, mutation arg51ala
  Author: b. bagautdinov, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dimer, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dvk.pdb. structural genomics, unknown function 31-jul-06 2dvk
  Title: crystal structure of hypothetical protein from aeropyrum pernix
  Author: n. k. lokanath, riken structural genomics/proteomics initiative (rsgi)
  Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dvl.pdb. oxidoreductase 31-jul-06 2dvl
  Title: crystal structure of project tt0160 from thermus thermophilus hb8
  Author: k. shimizu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2e9e.pdb. metal binding protein, oxidoreductase 25-jan-07 2e9e Fe Ca
  Title: crystal structure of the complex of goat lactoperoxidase with nitrate at 3.25 a resolution
  Author: a. k. singh, r. prem kumar, n. singh, s. sharma, s. b. singh, a. bhushan, p. kaur, t. p. singh
  Keywords: complex, nitrate, milk protein
  
• 2ewg.pdb. transferase 03-nov-05 2ewg Mg
  Title: t. brucei farnesyl diphosphate synthase complexed with minodronate
  Author: r. cao, j. mao, y. gao, h. robinson, s. odeh, a. goddard, e. oldfield
  
  
• 2flz.pdb. hydolase 06-jan-06 2flz
  Title: the x-ray structure of cis-3-chloroacrylic acid dehalogenase (cis-caad) with a sulfate ion bound in the active site
  Author: r. m. de jong
  Keywords: 4ot, hydratase, dehalogenation, 4-oxalocrotonate tautomerase
  
• 2fvy.pdb. transport protein 31-jan-06 2fvy Ca
  Title: high resolution glucose bound crystal structure of ggbp
  Author: m. j. borrok, l. l. kiessling, k. t. forest
  Keywords: hinge, chemotaxis, transport,
  
• 2fw0.pdb. transport protein 31-jan-06 2fw0 Na Ca
  Title: apo open form of glucose/galactose binding protein
  Author: m. j. borrok, l. l. kiessling, k. t. forest
  Keywords: hinge, chemotaxis, transport, ggbp
  
• 2fw3.pdb. transferase 01-feb-06 2fw3
  Title: crystal structure of rat carnitine palmitoyltransferase 2 in complex with antidiabetic drug st1326
  Author: a. c. rufer, r. thoma, j. benz, m. stihle, b. gsell, e. de roo, d. w. banner, f. mueller, o. chomienne, m. hennig
  
  
• 2fxp.pdb. virus/viral protein 06-feb-06 2fxp (NMR, minimized average structure)
  Title: solution structure of the sars-coronavirus hr2 domain
  Author: m. caffrey, s. hakansson-mcreynolds, s. jiang
  Keywords: trimer, coiled-coil
  
• 2fxs.pdb. chaperone 06-feb-06 2fxs Cl
  Title: yeast hsp82 in complex with the novel hsp90 inhibitor radamide
  Author: r. m. immormino, d. t. gewirth
  Keywords: hsp90, grp94, htpg, chaperone, ligand, radicicol, geldanamycin, radester
  
• 2fxt.pdb. protein transport 06-feb-06 2fxt
  Title: crystal structure of yeast tim44
  Author: r. josyula, b. sha
  
  
• 2fy1.pdb. structural protein/rna 07-feb-06 2fy1 (NMR, 17 structures)
  Title: a dual mode of rna recognition by the rbmy protein
  Author: l. skrisovska, c. bourgois, r. stefl, l. kister, p. wenter, d. elliot, j. stevenin, f. h. t. allain
  Keywords: structure, protein-rna complex, rna stem-loop
  
• 2fyp.pdb. chaperone 08-feb-06 2fyp Cl
  Title: grp94 in complex with the novel hsp90 inhibitor radester amine
  Author: r. m. immormino, d. t. gewirth
  Keywords: hsp82, hsp90, htpg, chaperone, ligand, radicicol, geldanamycin, radester, radamide
  
• 2g5l.pdb. peptide binding protein 23-feb-06 2g5l
  Title: streptavidin in complex with nanotag
  Author: m. perbandt, o. bruns, m. vallazza, t. lamla, c. betzel, v. a. erdmann
  Keywords: binding peptid, biotin, nanotag
  
• 2g6v.pdb. hydrolase, oxidoreductase 25-feb-06 2g6v Se
  Title: the crystal structure of ribd from escherichia coli
  Author: p. stenmark, m. moche, d. gurmu, p. nordlund, structural proteomics in europe (spine)
  Keywords: structural genomics, structural proteomics in europe, spine
  
• 2gc7.pdb. oxidoreductase, electron transport 13-mar-06 2gc7 Na Fe
  Title: substrate reduced, copper free complex of methylamine dehydrogenase, amicyanin and cytochrome c551i from paracoccus denitrificans.
  Author: z. chen, r. durley, v. l. davidson, f. s. mathews
  Keywords: methylamine dehydrogenase, cytochrome, amicyanin
  
• 2gd8.pdb. lyase 15-mar-06 2gd8 Hg Cl Zn
  Title: crystal structure analysis of the human carbonic anhydrase ii in complex with a 2-substituted estradiol bis-sulfamate
  Author: g. de simone, a. di fiore
  
  
• 2gdt.pdb. viral protein, hydrolase 17-mar-06 2gdt (NMR, 20 structures)
  Title: nmr structure of the nonstructural protein 1 (nsp1) from the sars coronavirus
  Author: m. s. almeida, t. herrmann, m. geralt, m. a. johnson, k. saikatendu, j. joseph, r. c. subramanian, b. w. neuman, m. j. buchmeier, r. c. stevens, p. kuhn, k. wuthrich
  Keywords: nmr, beta-barrel, alpha-beta, virus, replicase
  
• 2gf3.pdb. oxidoreductase 21-mar-06 2gf3 Cl
  Title: structure of the complex of monomeric sarcosine with its substrate analogue inhibitor 2-fuoric acid at 1.3 a resolution.
  Author: z. chen, p. trickey, m. s. jorns, f. s. mathews
  Keywords: inhibitor 2-fuoric acid
  
• 2gh9.pdb. sugar binding protein 27-mar-06 2gh9
  Title: thermus thermophilus maltotriose binding protein bound with maltotriose
  Author: m. j. cuneo, a. changela, l. s. beese, h. w. hellinga
  Keywords: thermus thermophilus, maltose binding protein, thermophilic protein, periplasmic binding protein
  
• 2gha.pdb. sugar binding protein 27-mar-06 2gha
  Title: thermotoga maritima maltotriose binding protein bound with maltotriose
  Author: m. j. cuneo, a. changela, b hocker, l. s. beese, h. w. hellinga
  Keywords: mbp, maltotriose, thermotoga maritima
  
• 2ghb.pdb. sugar binding protein 27-mar-06 2ghb
  Title: thermotoga maritima maltotriose binding protein, ligand free form
  Author: m. j. cuneo, a. changela, b. hocker, l. s. beese, h. w. hellinga
  Keywords: mbp, periplasmic binding protein, thermotoga maritima
  
• 2gjz.pdb. immune system 31-mar-06 2gjz Zn
  Title: structure of catalytic elimination antibody 13g5 from a crystal in space group p2(1)
  Author: e. w. debler, i. a. wilson
  Keywords: catalytic antibody, elimination
  
• 2gk0.pdb. immune system 31-mar-06 2gk0
  Title: structure of catalytic elimination antibody 13g5 from a twinned crystal in space group c2
  Author: e. w. debler, i. a. wilson
  Keywords: catalytic antibody, elimination
  
• 2gp6.pdb. transferase 17-apr-06 2gp6
  Title: x-ray crystal structure of mycobacterium tuberculosis beta- ketoacyl acyl carrier protein synthase ii (mtkasb)
  Author: s. sridharan, j. sacchettini, tb structural genomics consortium (tbsgc)
  Keywords: structural genomics, psi, protein structure initiative, tb structural genomics consortium, tbsgc
  
• 2gt7.pdb. hydrolase 27-apr-06 2gt7
  Title: crystal structure of sars coronavirus main peptidase at ph 6.0 in the space group p21
  Author: t. -w. lee, m. m. cherney, c. huitema, j. liu, k. e. james, j. c. powers, l. d. eltis, m. n. g. james
  Keywords: 3c-like, n-finger, chymotrypsin-like fold, long loop, alpha-helical domain, dimer, catalytic dyad, specificity pockets
  
• 2gt8.pdb. hydrolase 27-apr-06 2gt8
  Title: crystal structure of sars coronavirus main peptidase (with an additional ala at the n-terminus of each protomer) in the space group p43212
  Author: t. -w. lee, m. m. cherney, c. huitema, j. liu, k. e. james, j. c. powers, l. d. eltis, m. n. g. james
  Keywords: 3c-like, n-finger, chymotrypsin-like fold, long loop, alpha-helical domain, dimer, catalytic dyad, specificity pockets
  
• 2gtb.pdb. hydrolase 27-apr-06 2gtb
  Title: crystal structure of sars coronavirus main peptidase (with an additional ala at the n-terminus of each protomer) inhibited by an aza-peptide epoxide in the space group p43212
  Author: t. -w. lee, m. m. cherney, c. huitema, j. liu, k. e. james, j. c. powers
  Keywords: 3c-like, n-finger, chymotrypsin-like fold, long loop, alpha-helical domain, dimer, catalytic dyad, specificity pockets
  
• 2h6r.pdb. isomerase 01-jun-06 2h6r
  Title: crystal structure of triosephosphate isomerase (tim) from methanocaldococcus jannaschii
  Author: p. gayathri, m. banerjee, a. vijayalakshmi, h. balaram, p. balaram, m. r. n. murthy
  
  
• 2h7w.pdb. hydrolase inhibitor 05-jun-06 2h7w
  Title: crystal structure of chagasin, the endogenous cysteine- protease inhibitor from trypanosoma cruzi
  Author: a. a. figueiredo da silva, b. g. guimaraes
  Keywords: immunoglobulin-fold
  
• 2h8w.pdb. rna binding protein 08-jun-06 2h8w (NMR, 20 structures)
  Title: solution structure of ribosomal protein l11
  Author: d. lee, j. d. walsh, p. yu, t. choli-papadopoulou, s. krueger, d. draper, y. -x. wang
  Keywords: antibiotics, ribosome
  
• 2h9i.pdb. oxidoreductase 09-jun-06 2h9i
  Title: mycobacterium tuberculosis inha bound with eth-nad adduct
  Author: f. wang, j. c. sacchettini
  Keywords: ethionamide, eth, tuberculosis
  
• 2haq.pdb. isomerase 13-jun-06 2haq
  Title: crystal structure of cyclophilin a from leishmania donovani
  Author: v. venugopal, b. sen, a. k. datta, r. banerjee.
  Keywords: rotamase, proline, isomerase, cis-trans, protozoa, leishmania, donovani, kala-azar.
  
• 2hcn.pdb. transferase 17-jun-06 2hcn Zn Ca
  Title: crystal structure of rna dependent rna polymerase domain from west nile virus
  Author: m. p. egloff, h. malet, marseilles structural genomics program @ afmb (msgp)
  Keywords: structural genomics, marseilles structural genomics program @ afmb, msgp
  
• 2hcs.pdb. transferase 18-jun-06 2hcs Zn
  Title: crystal structure of rna dependant rna polymerase domain of west nile virus
  Author: m. p. egloff, h. malet, marseilles structural genomics program @ afmb (msgp)
  Keywords: structural genomics, marseilles structural genomics program @ afmb, msgp
  
• 2hd7.pdb. contractile protein 20-jun-06 2hd7 (NMR, 15 structures)
  Title: solution structure of c-teminal domain of twinfilin-1.
  Author: m. h. hellman, v. o. paavilainen, a. annila, p. lappalainen, p. i. permi
  Keywords: actin binding protein, nmr
  
• 2hfz.pdb. transferase 26-jun-06 2hfz Mg Zn
  Title: crystal structure of rna dependent rna polymerase domain from west nile virus
  Author: m. p. egloff, h. malet, marseilles structural genomics program @ afmb (msgp)
  Keywords: structural genomics, marseilles structural genomics program @ afmb, msgp
  
• 2hm3.pdb. structural protein 11-jul-06 2hm3 (NMR, 10 structures)
  Title: nematocyst outer wall antigen, cysteine rich domain nw1
  Author: s. meier, p. r. jensen, s. grzesiek, s. oezbek
  Keywords: evolution, cysteine rich, nematocyst
  
• 2hm4.pdb. structural protein 11-jul-06 2hm4 (NMR, 10 structures)
  Title: nematocyst outer wall antigen, nw1 k21p
  Author: s. meier, p. r. jensen, s. grzesiek, s. oezbek
  Keywords: cysteine rich, nematocyst
  
• 2hm5.pdb. structural protein 11-jul-06 2hm5 (NMR, 10 structures)
  Title: nw1, k21p, structural species ii
  Author: s. meier, p. r. jensen, s. grzesiek, s. oezbek
  Keywords: nematocyst, bridge state, cysteine rich
  
• 2hm6.pdb. structural protein 11-jul-06 2hm6 (NMR, 10 structures)
  Title: nematocyst outer wall antigen, nw1 g11v k21p
  Author: s. meier, p. r. jensen, s. grzesiek, s. oezbek
  Keywords: cysteine rich, nematocyst
  
• 2hor.pdb. lyase 16-jul-06 2hor Cl
  Title: crystal structure of alliinase from garlic- apo form
  Author: l. j. w shimon, a. rabinkov, m. wilcheck, d. mirelman, f. frolow
  
  
• 2hox.pdb. lyase 17-jul-06 2hox Cl
  Title: alliinase from allium sativum (garlic)
  Author: l. j. w. shimon, a. rabinkov, m. wilcheck, d. mirelman, f. frolow
  Keywords: alliinase
  
• 2hp4.pdb. immune system 17-jul-06 2hp4
  Title: computational design and crystal structure of an enhanced affinity mutant human cd8-alpha-alpha co-receptor
  Author: p. j. rizkallah, d. k. cole, b. k. jakobsen, j. m. boulter, m. glick, g. f. gao
  Keywords: co-receptor, soluble protein, crystal structure, kd, protein engineering, immunotherapy, immune-suppressor
  
• 2hsh.pdb. oxidoreductase 21-jul-06 2hsh
  Title: crystal structure of c73s mutant of human thioredoxin-1 oxidized with h2o2
  Author: a. weichsel, w. r. montfort
  
  
• 2hsx.pdb. viral protein, hydrolase 24-jul-06 2hsx (NMR)
  Title: nmr structure of the nonstructural protein 1 (nsp1) from the sars coronavirus
  Author: m. s. almeida, t. herrmann, m. geralt, m. a. johnson, k. saikatendu, j. joseph, r. c. subramanian, b. w. neuman, m. j. buchmeier, r. c. stevens, p. kuhn, k. wuthrich
  Keywords: nmr, beta-barrel, alpha-beta, virus, replicase
  
• 2htj.pdb. transcription activator 25-jul-06 2htj (NMR, minimized average structure)
  Title: nmr structure of e.coli papi
  Author: t. kawamura, h. zhou, l. u. k. le, f. w. dahlquist
  Keywords: pap pili
  
• 2hxk.pdb. oxidoreductase 03-aug-06 2hxk
  Title: crystal structure of s-nitroso thioredoxin
  Author: a. weichsel, w. r. montfort
  Keywords: s-nitrosocysteine
  
• 2i2z.pdb. lipid binding protein 17-aug-06 2i2z
  Title: human serum albumin complexed with myristate and aspirin
  Author: f. yang, c. bian, l. zhu, g. zhao, z. huang, m. huang
  Keywords: metal-binding, lipid-binding
  
• 2i30.pdb. lipid binding protein 17-aug-06 2i30
  Title: human serum albumin complexed with myristate and salicylic acid
  Author: f. yang, c. bian, l. zhu, g. zhao, z. huang, m. huang
  Keywords: metal-binding, lipid-binding
  
• 2i3s.pdb. cell cycle 20-aug-06 2i3s
  Title: bub3 complex with bub1 glebs motif
  Author: n. a. larsen, s. c. harrison
  Keywords: beta-propeller, glebs motif, mitotic spindle checkpoint
  
• 2i3t.pdb. cell cycle 20-aug-06 2i3t
  Title: bub3 complex with mad3 (bubr1) glebs motif
  Author: n. a. larsen, s. c. harrison
  Keywords: beta propeller, mitotic spindle checkpoint
  
• 2i9t.pdb. transcription/dna 06-sep-06 2i9t
  Title: structure of nf-kb p65-p50 heterodimer bound to prdii element of b-interferon promoter
  Author: c. r escalante, l. shen, d. thanos, a. k. aggarwal
  
  
• 2i9v.pdb. signaling protein 06-sep-06 2i9v
  Title: structural role of y98 in pyp: effects on fluorescence, gateway and photocycle recovery
  Author: s. n. savvides, j. kyndt
  Keywords: photoactivation
  
• 2iak.pdb. cell adhesion 08-sep-06 2iak
  Title: crystal structure of a protease resistant fragment of the plakin domain of bullous pemphigoid antigen1 (bpag1)
  Author: j. j. jefferson
  Keywords: spectrin repeat
  
• 2iba.pdb. oxidoreductase 11-sep-06 2iba Na
  Title: urate oxidase from aspergillus flavus complexed with its inhibitor 8-azaxanthine
  Author: n. colloc'h, p. retailleau, j. sopkova-de oliveira santos, t. prange
  Keywords: t-fold domain, tetrameric enzyme
  
• 2ic0.pdb. oxidoreductase 12-sep-06 2ic0 Na Xe
  Title: urate oxidase under 2.0 mpa pressure of xenon
  Author: n. colloc'h, p. retailleau, j. sopkova-de oliveira santos, j. h. abraini, t. prange
  Keywords: t-fold domain, gaz-protein complex
  
• 2ido.pdb. transferase 15-sep-06 2ido Mn
  Title: structure of the e. coli pol iii epsilon-hot proofreading complex
  Author: t. w. kirby, s. harvey, e. f. derose, s. chalov, a. k. chikova, f. w. perrino, r. m. schaaper, r. e. london, l. c. pedersen
  Keywords: exonuclease, hot, epsilon, pol iii
  
• 2idx.pdb. transferase 15-sep-06 2idx Cl Mg
  Title: structure of human atp:cobalamin adenosyltransferase bound to atp.
  Author: h. l. schubert, c. p. hill
  Keywords: cobalamin, adenosyltransferase
  
• 2ie6.pdb. protein and metal binding protein 18-sep-06 2ie6 Ca Xe
  Title: annexin v under 2.0 mpa pressure of xenon
  Author: n. colloc'h, j. sopkova-de oliveira santos, t. prange, a. brisson, b. langlois d'estainto, b. gallois
  Keywords: phospholipid binding protein, membrane binding protein
  
• 2ie7.pdb. protein and metal binding protein 18-sep-06 2ie7 Ca
  Title: annexin v under 2.0 mpa pressure of nitrous oxide
  Author: n. colloc'h, j. sopkova-de oliveira santos, t. prange, a. brisson, b. langlois d'estainto, b. gallois
  Keywords: phospholipid binding protein, membrane binding protein
  
• 2ief.pdb. dna binding protein/dna 18-sep-06 2ief
  Title: structure of the cooperative excisionase (xis)-dna complex reveals a micronucleoprotein filament
  Author: m. a. abbani, c. v. papagiannis, m. d. sam, d. cascio, r. c. johnson, r. t. clubb
  
  
• 2iej.pdb. transferase 19-sep-06 2iej Zn
  Title: human protein farnesyltransferase complexed with inhibitor compound stn-48 and fpp analog at 1.8a resolution
  Author: m. a. hast, l. s. beese
  Keywords: farnesyltransferase, farnesyl transferase, caax, ras, cancer, tumor regression, stn-48, protein prenylation, lipid modification, plasmodium, falciparum, malaria
  
• 2ifq.pdb. oxidoreductase 21-sep-06 2ifq
  Title: crystal structure of s-nitroso thioredoxin
  Author: a. weichsel, w. r. montfort
  Keywords: phoroteduction
  
• 2iiy.pdb. oxidoreductase 28-sep-06 2iiy
  Title: crystal structure of s-nitroso thioredoxin
  Author: a. weichsel, w. r. montfort
  Keywords: s-nitrosocysteine
  
• 2inq.pdb. oxidoreductase 08-oct-06 2inq D (neutron diffraction)
  Title: neutron crystal structure of escherichia coli dihydrofolate reductase bound to the anti-cancer drug, methotrexate
  Author: b. c. bennett, p. a. langan, l. coates, b. schoenborn, c. g. dealwis
  
  
• 2iny.pdb. viral protein 09-oct-06 2iny
  Title: nanoporous crystals of chicken embryo lethal orphan (celo) adenovirus major coat protein, hexon
  Author: l. xu, s. d. benson, r. m. burnett
  Keywords: celo, major coat protein, hexon, crystal packing, nanotechnology, viral jelly roll
  
• 2iov.pdb. luminescent protein 11-oct-06 2iov
  Title: bright-state structure of the reversibly switchable fluorescent protein dronpa
  Author: a. c. stiel, s. trowitzsch, g. weber, m. andresen, c. eggeling, s. w. hell, s. jakobs, m. c. wahl
  Keywords: green- fluorescent protein-like protein
  
• 2iwy.pdb. transferase 05-jul-06 2iwy
  Title: human mitochondrial beta-ketoacyl acp synthase
  Author: c. e. christensen, b. kragelund, p. von wettstein-knowles, a. henriksen
  Keywords: homo sapiens
  
• 2iwz.pdb. transferase 05-jul-06 2iwz
  Title: human mitochondrial beta-ketoacyl acp synthase complexed with hexanoic acid
  Author: c. e. christensen, b. kragelund, p. von wettstein-knowles, a. henriksen
  Keywords: homo sapiens
  
• 2ix4.pdb. transferase 06-jul-06 2ix4 K
  Title: arabidopsis thaliana mitochondrial beta-ketoacyl acp synthase hexanoic acid complex
  Author: c. e. christensen, b. kragelund, p. von wettstein-knowles, a. henriksen
  Keywords: lipid metabolism, condensing enzyme, fatty acid elongation, fatty acid biosynthesis, lipid synthesis, transit peptide, acyltransferase, synthase, transferase, acyl complex, mitochondrion
  
• 2j4e.pdb. hydrolase 29-aug-06 2j4e Mg
  Title: the itp complex of human inosine triphosphatase
  Author: p. stenmark, p. kursula, c. arrowsmith, h. berglund, r. busam, r. collins, a. edwards, m. ehn, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg schiavone, m. hogbom, t. kotenyova, r. landry, p. loppnau, a. magnusdottir, p. nilsson-ehle, t. nyman, d. ogg, c. persson, j. sagemark, m. sundstrom, j. uppenberg, a. g. thorsell, h. schuler, s. van den berg, k. wallden, j. weigelt, p. nordlund
  Keywords: itp, imp, hydrolase, disease mutation, inosine triphosphate pyrophosphohydrolase, inosine triphosphatase deficiency
  
• 2j5w.pdb. oxidoreductase 19-sep-06 2j5w Cu Na Ca
  Title: ceruloplasmin revisited: structural and functional roles of various metal cation binding sites
  Author: i. bento, c. peixoto, v. n. zaitsev, p. f. lindley
  Keywords: plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase, ceruloplasmin, metal-binding, ion transport
  
• 2j6j.pdb. viral protein 29-sep-06 2j6j Yb
  Title: prefusion form of the vesicular stomatitis virus glycoprotein g ectodomain
  Author: s. roche, f. a. rey, s. bressanelli
  Keywords: lipoprotein, glycoprotein, transmembrane, virion protein, membrane protein, envelope protein, transmembrane fusion, viral protein
  
• 2j89.pdb. oxidoreductase 23-oct-06 2j89
  Title: functional and structural aspects of poplar cytosolic and plastidial type a methionine sulfoxide reductases
  Author: n. rouhier, b. kauffmann, f. tete-favier, p. paladino, p. gans, g. branlant, j. p. jacquot, s. boschi-muller
  Keywords: poplar, sulfoxide reductase, oxidoreductase
  
• 2j8m.pdb. transferase 26-oct-06 2j8m
  Title: structure of p. aeruginosa acetyltransferase pa4866
  Author: a. m. davies, r. tata, r. l. beavil, b. j. sutton, p. r. brown
  Keywords: phosphinothricin, methionine sulfone, pseudomonas aeruginosa, methionine sulfoximine, n-acetyl transferase, hypothetical protein, transferase
  
• 2j8n.pdb. transferase 26-oct-06 2j8n
  Title: structure of p. aeruginosa acetyltransferase pa4866 solved at room temperature
  Author: a. m. davies, r. tata, r. l. beavil, b. j. sutton, p. r. brown
  Keywords: phosphinothricin, methionine sulfone, pseudomonas aeruginosa, methionine sulfoximine, n-acetyl transferase, hypothetical protein, transferase
  
• 2j8r.pdb. transferase 27-oct-06 2j8r
  Title: structure of p. aeruginosa acetyltransferase pa4866 solved in complex with l-methionine sulfoximine
  Author: a. m. davies, r. tata, r. l. beavil, b. j. sutton, p. r. brown
  Keywords: phosphinothricin, methionine sulfone, pseudomonas aeruginosa, methionine sulfoximine, n-acetyl transferase, hypothetical protein, transferase
  
• 2j8x.pdb. hydrolase/inhibitor complex 31-oct-06 2j8x
  Title: epstein-barr virus uracil-dna glycosylase in complex with ugi from pbs-2
  Author: t. geoui, m. buisson, n. tarbouriech, w. p. burmeister
  Keywords: dna repair, lytic protein, epstein-barr virus, uracil-dna glycosylase,hydrolase, uracil-dna glycosylase inhibitor, hydrolase/inhibitor complex
  
• 2jal.pdb. hydrolase 29-nov-06 2jal Ca
  Title: beta-glucosidase from thermotoga maritima in complex with cyclophellitol
  Author: t. m. gloster, r. madsen, g. j. davies
  Keywords: glycosidase, glycoside hydrolase, cellulose degradation, carbohydrate metabolism, family 1, covalent, hydrolase, inhibitor
  
• 2jb9.pdb. transcription 05-dec-06 2jb9
  Title: phob response regulator receiver domain constitutively- active double mutant d10a and d53e.
  Author: c. ferrer-orta, r. arribas-bosacoma, s. -k. kim, a. g. blanco, p. j. b. pereira, f. x. gomis-ruth, b. l. wanner, m. coll, m. sola
  Keywords: phosphate transport, activation of the pho regulon, transcription, phosphorylation, gene regulation, alpha/beta doubly woun fold
  
• 2jba.pdb. transcription 05-dec-06 2jba Na
  Title: phob response regulator receiver domain constitutively- active double mutant d53a and y102c.
  Author: r. arribas-bosacoma, c. ferrer-orta, s. -k. kim, a. g. blanco, p. j. b. pereira, f. x. gomis-ruth, b. l. wanner, m. coll, m. sola
  Keywords: phosphate transport, activation of the pho regulon, transcription, phosphorylation, gene regulation, alpha/beta doubly woun fold
  
• 2jbr.pdb. oxidoreductase 11-dec-06 2jbr
  Title: structure of the monooxygenase component of p- hydroxyphenylacetate hydroxylase from acinetobacter baumanni
  Author: a. alfieri, a. mattevi
  Keywords: oxidoreductase
  
• 2jbs.pdb. oxidoreductase 11-dec-06 2jbs
  Title: structure of the monooxygenase component of p- hydroxyphenylacetate hydroxylase from acinetobacter baumannii
  Author: a. alfieri, a. mattevi
  Keywords: oxidoreductase
  
• 2jbt.pdb. oxidoreductase 11-dec-06 2jbt
  Title: structure of the monooxygenase component of p- hydroxyphenylacetate hydroxylase from acinetobacter baumannii
  Author: a. alfieri, a. mattevi
  Keywords: hydroxylase, oxidoreductase
  
• 2jd5.pdb. transferase 04-jan-07 2jd5 Mg
  Title: sky1p bound to npl3p-derived substrate peptide
  Author: b. nolen, r. lukasiewicz, j. adams, d. huang, g. ghosh
  Keywords: serine/threonine-protein kinase, kinase, transferase, atp-binding, nucleotide-binding
  
• 2je8.pdb. hydrolase 16-jan-07 2je8 Cl
  Title: structure of a beta-mannosidase from bacteroides thetaiotaomicron
  Author: l. e. tailford, v. a. money, n. l. smith, c. dumon, g. j. davies, h. j. gilbert
  Keywords: glycoside hydrolase, hydrolase
  
• 2jm3.pdb. metal binding protein 21-sep-06 2jm3 Zn (NMR, 20 structures)
  Title: solution structure of the thap domain from c. elegans c- terminal binding protein (ctbp)
  Author: c. k. liew, m. crossley, j. p. mackay, h. r. nicholas
  Keywords: zinc finger, domain
  
• 2jmg.pdb. viral protein 11-nov-06 2jmg (NMR, 20 structures)
  Title: solution structure of v7r mutant of hiv-1 myristoylated matrix protein
  Author: j. s. saad, e. loeliger, p. luncsford, m. liriano, j. tai, a. kim, j. miller, a. joshi, e. o. freed, m. f. summers
  
  
• 2jna.pdb. structural genomics, unknown function 31-dec-06 2jna (NMR, 20 structures)
  Title: solution nmr structure of salmonella typhimurium lt2 secreted protein stm0082: northeast structural genomics consortium target str109
  Author: a. eletsky, d. parish, g. liu, d. sukumaran, m. jiang, k. cunningham, l. ma, r. xiao, b. rost, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
  Keywords: homodimer, psi-2, alpha+beta, putative secreted protein, structural genomics, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2nlw.pdb. translation 20-oct-06 2nlw (NMR, 16 structures)
  Title: solution structure of the rrm domain of human eukaryotic initiation factor 3b
  Author: l. elantak, a. g. tzakos, n. locker, p. j. lukavsky
  Keywords: eukaryotic initiation factor 3 complex, rna recognition motif
  
• 2nn2.pdb. transcription 23-oct-06 2nn2
  Title: crystal structure of the btb domain from the lrf/zbtb7 transcriptional regulator
  Author: p. j. stogios, l. chen, g. g. prive
  Keywords: transcription repressor, zinc-finger protein, btb domain, candidate oncoprotein, poz domain
  
• 2nrr.pdb. hydrolase 02-nov-06 2nrr
  Title: crystal structure of the c-terminal rnaseh endonuclase domain of uvrc
  Author: e. karakas, j. j. truglio, c. kisker
  Keywords: endonuclase, ner
  
• 2nrt.pdb. hydrolase 02-nov-06 2nrt Cl
  Title: crystal structure of the c-terminal half of uvrc
  Author: e. karakas, j. j. truglio, c. kisker
  Keywords: endonuclease, rnase h, helix hairpin helix, ner, uvrabc
  
• 2nrv.pdb. hydrolase 02-nov-06 2nrv Na
  Title: crystal structure of the c-terminal half of uvrc
  Author: e. karakas, j. j. truglio, c. kisker
  Keywords: rnase h, endonuclase, helix hairpin helix, uvrabc, ner
  
• 2nrw.pdb. hydrolase 02-nov-06 2nrw
  Title: crystal structure of the c terminal half of uvrc
  Author: e. karakas, j. j. truglio, c. kisker
  Keywords: rnase h, endonuclase, helix hairpin helix, uvrabc, ner
  
• 2nrx.pdb. hydrolase 02-nov-06 2nrx
  Title: crystal structure of the c-terminal half of uvrc, in the presence of sulfate molecules
  Author: e. karakas, j. j. truglio, c. kisker
  Keywords: rnase h, endonuclase, helix hairpin helix, uvrabc, ner
  
• 2nrz.pdb. hydrolase 02-nov-06 2nrz Mn
  Title: crystal structure of the c-terminal half of uvrc bound to its catalytic divalent cation
  Author: e. karakas, j. j. truglio, c. kisker
  Keywords: rnase h, endonuclase, helix hairpin helix, uvrabc, ner, divalent cation, manganese
  
• 2ns6.pdb. hydrolase 03-nov-06 2ns6 Mn
  Title: crystal structure of the minimal relaxase domain of moba from plasmid r1162
  Author: a. f. monzingo, a. ozburn, s. xia, r. j. meyer, j. d. robertus
  Keywords: 5-strand antiparallel beta sheet, metalloenzyme
  
• 2ntj.pdb. oxidoreductase 07-nov-06 2ntj
  Title: mycobacterium tuberculosis inha bound with pth-nad adduct
  Author: f. wang, j. c. sacchettini
  Keywords: prothionamide, tuberculosis
  
• 2ntv.pdb. oxidoreductase 08-nov-06 2ntv
  Title: mycobacterium leprae inha bound with pth-nad adduct
  Author: f. wang, j. c. sacchettini
  Keywords: inha, prothionamide
  
• 2nub.pdb. signaling protein 09-nov-06 2nub
  Title: structure of aquifex aeolicus argonuate
  Author: u. j. rashid, d. paterok, a. koglin, h. gohlke, j. piehler, j. c. -h. chen
  Keywords: argonaute, ribonuclease, rnai, risc
  
• 2num.pdb. oxidoreductase 09-nov-06 2num Fe
  Title: soluble domain of rieske iron-sulfur protein
  Author: d. kolling, j. brunzelle, s. lhee, a. r. crofts, s. k. nair
  
  
• 2nv3.pdb. viral protein 10-nov-06 2nv3 (NMR, 20 structures)
  Title: solution structure of l8a mutant of hiv-1 myristoylated matrix protein
  Author: j. s. saad, e. loeliger, p. luncsford, m. liriano, j. tai, a. kim, j. miller, a. joshi, e. o. freed, m. f. summers
  
  
• 2nve.pdb. oxidoreductase 12-nov-06 2nve Fe
  Title: soluble domain of rieske iron sulfur protein
  Author: d. k. kolling, j. s. brunzelle, s. lhee, a. r. crofts, s. k. nair
  
  
• 2nvf.pdb. oxidoreductase 12-nov-06 2nvf Fe
  Title: soluble domain of rieske iron-sulfur protein.
  Author: d. kolling, j. brunzelle, s. lhee, a. r. crofts, s. k. nair
  
  
• 2nvg.pdb. oxidoreductase 12-nov-06 2nvg Fe
  Title: soluble domain of rieske iron sulfur protein.
  Author: d. kolling, j. brunzelle, s. lhee, a. r. crofts, s. k. nair
  
  
• 2nxe.pdb. transferase 17-nov-06 2nxe
  Title: t. thermophilus ribosomal protein l11 methyltransferase (prma) in complex with s-adenosyl-l-methionine
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: postranslational modification
  
• 2nxj.pdb. transferase 17-nov-06 2nxj
  Title: t.thermophilus ribosomal protein l11 methyltransferase (prma) in space group p 21 21 2
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: postranslational modification
  
• 2nxn.pdb. transferase 17-nov-06 2nxn
  Title: t. thermophilus ribosomal protein l11 methyltransferase (prma) in complex with ribosomal protein l11
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: post- translational modification
  
• 2nxp.pdb. transcription 17-nov-06 2nxp Ca Se
  Title: structure of ntd2 domain of the human taf5 subunit of tfiid
  Author: s. bhattacharya, s. takada, r. h. jacobson
  Keywords: tfiid subunit, taf5
  
• 2nxy.pdb. viral protein/immune system 20-nov-06 2nxy
  Title: hiv-1 gp120 envelope glycoprotein(s334a) complexed with cd4 and antibody 17b
  Author: t. zhou, l. xu, b. dey, a. j. hessell, d. van ryk, s. h. xiang, x. yang, m. y. zhang, m. b. zwick, j. arthos, d. r. burton, d. s. dimitrov, j. sodroski, r. wyatt, g. j. nabel, p. d. kwong
  Keywords: gp120, antibody, cd4
  
• 2nxz.pdb. viral protein/immune system 20-nov-06 2nxz
  Title: hiv-1 gp120 envelope glycoprotein (t257s, s334a, s375w) complexed with cd4 and antibody 17b
  Author: t. zhou, l. xu, b. dey, a. j. hessell, d. van ryk, s. h. xiang, x. yang, m. y. zhang, m. b. zwick, j. arthos, d. r. burton, d. s. dimitrov, j. sodroski, r. wyatt, g. j. nabel, p. d. kwong
  Keywords: gp120, antibody, cd4
  
• 2ny0.pdb. viral protein/immune system 20-nov-06 2ny0
  Title: hiv-1 gp120 envelope glycoprotein (m95w, w96c, t257s, v275c, s334a, s375w, a433m) complexed with cd4 and antibody 17b
  Author: t. zhou, l. xu, b. dey, a. j. hessell, d. van ryk, s. h. xiang, x. yang, m. y. zhang, m. b. zwick, j. arthos, d. r. burton, d. s. dimitrov, j. sodroski, r. wyatt, g. j. nabel, p. d. kwong
  Keywords: gp120, antibody, cd4
  
• 2ny1.pdb. viral protein/immune system 20-nov-06 2ny1
  Title: hiv-1 gp120 envelope glycoprotein (i109c, t257s, s334a, s375w, q428c) complexed with cd4 and antibody 17b
  Author: t. zhou, l. xu, b. dey, a. j. hessell, d. van ryk, s. h. xiang, x yang, m. y. zhang, m. b. zwick, j. arthos, d. r. burton, d. s. dimitrov, j. sodroski, r. wyatt, g. j. nabel, p. d. kwong
  Keywords: gp120, antibody, cd4
  
• 2ny2.pdb. viral protein/immune system 20-nov-06 2ny2
  Title: hiv-1 gp120 envelope glycoprotein (t123c, t257s, s334a, s375w, g431c) complexed with cd4 and antibody 17b
  Author: t. zhou, l. xu, b. dey, a. j. hessell, d. van ryk, s. h. xiang, x. yang, m. y. zhang, m. b. zwick, j. arthos, d. r. burton, d. s. dimitrov, j. sodroski, r. wyatt, g. j. nabel, p. d. kwong
  Keywords: gp120, antibody, cd4
  
• 2ny3.pdb. viral protein/immune system 20-nov-06 2ny3
  Title: hiv-1 gp120 envelope glycoprotein (k231c, t257s, e267c, s334a, s375w) complexed with cd4 and antibody 17b
  Author: t. zhou, l. xu, b. dey, a. j. hessell, d. van ryk, s. h. xiang, x. yang, m. y. zhang, m. b. zwick, j. arthos, d. r. burton, d. s. dimitrov, j. sodroski, r. wyatt, g. j. nabel, p. d. kwong
  Keywords: gp120, antibody, cd4
  
• 2ny4.pdb. viral protein/immune system 20-nov-06 2ny4
  Title: hiv-1 gp120 envelope glycoprotein (k231c, t257s, e268c, s334a, s375w) complexed with cd4 and antibody 17b
  Author: t. zhou, l. xu, b. dey, a. j. hessell, d. van ryk, s. h. xiang, x. yang, m. y. zhang, m. b. zwick, j. arthos, d. r. burton, d. s. dimitrov, j. sodroski, r. wyatt, g. j. nabel, p. d. kwong
  Keywords: gp120, antibody, cd4
  
• 2ny5.pdb. viral protein/immune system 20-nov-06 2ny5
  Title: hiv-1 gp120 envelope glycoprotein (m95w, w96c, i109c, t257s, v275c, s334a, s375w, q428c, a433m) complexed with cd4 and antibody 17b
  Author: t. zhou, l. xu, b. dey, a. j. hessell, d. van ryk, s. h. xiang, x. yang, m. y. zhang, m. b. zwick, j. arthos, d. r. burton, d. s. dimitrov, j. sodroski, r. wyatt, g. j. nabel, p. d. kwong
  Keywords: gp120, antibody, cd4
  
• 2ny6.pdb. viral protein/immune system 20-nov-06 2ny6
  Title: hiv-1 gp120 envelope glycoprotein (m95w, w96c, i109c, t123c, t257s, v275c,s334a, s375w, q428c, g431c) complexed with cd4 and antibody 17b
  Author: t. zhou, l. xu, b. dey, a. j. hessell, d. van ryk, s. h. xiang, x. yang, m. y. zhang, m. b. zwick, j. arthos, d. r. burton, d. s. dimitrov, j. sodroski, r. wyatt, g. j. nabel, p. d. kwong
  Keywords: gp120, antibody, cd4
  
• 2ny7.pdb. viral protein/immune system 20-nov-06 2ny7
  Title: hiv-1 gp120 envelope glycoprotein complexed with the broadly neutralizing cd4-binding-site antibody b12
  Author: t. zhou, l. xu, b. dey, a. j. hessell, d. van ryk, s. h. xiang, x. yang, m. y. zhang, m. b. zwick, j. arthos, d. r. burton, d. s. dimitrov, j. sodroski, r. wyatt, g. j. nabel, p. d. kwong
  Keywords: gp120, broadly neutralizing antibody, b12
  
• 2nyf.pdb. lyase 20-nov-06 2nyf
  Title: crystal structure of phenylalanine ammonia-lyase from nostoc punctiforme
  Author: g. v. louie, m. c. moffitt, m. e. bowman, j. pence, j. p. noel, b. s. moore
  
  
• 2nyn.pdb. lyase 21-nov-06 2nyn
  Title: crystal structure of phenylalanine ammonia-lyase from anabaena variabilis
  Author: g. v. louie, m. c. moffitt, m. e. bowman, j. pence, j. p. noel, b. s. moore
  
  
• 2nyo.pdb. structural protein/rna/antibiotic 21-nov-06 2nyo (NMR, 10 structures)
  Title: model for thiostrepton binding to the ribosomal l11-rna region
  Author: h. r. a. jonker, s. ilin, s. k. grimm, j. woehnert, h. schwalbe
  Keywords: rna, thiostrepton, ribosome, thiazole, antibiotic
  
• 2o0i.pdb. surface active protein 27-nov-06 2o0i
  Title: crystal structure of the r185a mutant of the n-terminal domain of the group b streptococcus alpha c protein
  Author: j. m. hogle, d. j. filman, m. j. baron, l. c. madoff, a. iglesias
  Keywords: beta sandwich, fibronectin fold, antiparallel three-helix bundle
  
• 2o1f.pdb. transferase 28-nov-06 2o1f Hg
  Title: natural occuring mutation of human abo(h) galactosyltransferase: gtb/m214r
  Author: j. a. letts, s. n. borisova, s. v. evans
  Keywords: blood group subtypes. naturally occurring mutation, dxd, gtb
  
• 2o1g.pdb. transferase 28-nov-06 2o1g Hg
  Title: natural occurring mutant of human abo(h) galactosyltransferase: gtb/m214t
  Author: j. a. letts, s. n. borisova, s. v. evans
  Keywords: gtb, blood type subgroups, naturally occuring mutant, dxd
  
• 2o1h.pdb. transferase 28-nov-06 2o1h Hg Mn
  Title: naturally occurring mutation of humna abo(h) galactosyltransferase in complex with udp: gtb/m214t_udp
  Author: j. a. letts, s. n. borisova, s. v. evans
  Keywords: galactosyltransferase, gtb, blood type subgroup, dxd
  
• 2o1s.pdb. transferase 29-nov-06 2o1s Mg K Se
  Title: 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from escherichia coli
  Author: s. xiang, g. usunow, g. lange, m. busch, l. tong
  Keywords: thiamine, isoprenoid
  
• 2o1x.pdb. transferase 29-nov-06 2o1x Mg
  Title: 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from deinococcus radiodurans
  Author: s. xiang, g. usunow, g. lange, m. busch, l. tong
  Keywords: isoprenoid, dxs, 1-deoxy-d-xylulose-5-phosphate
  
• 2o32.pdb. ribonucleic acid 30-nov-06 2o32 (NMR, 20 structures)
  Title: solution structure of u2 snrna stem i from human, containing modified nucleotides
  Author: d. g. sashital, v. venditti, c. g. angers, g. cornilescu, s. e. butcher
  Keywords: wobble base-pairs, tetraloop
  
• 2o33.pdb. ribonucleic acid 30-nov-06 2o33 (NMR, 20 structures)
  Title: solution structure of u2 snrna stem i from s. cerevisiae
  Author: d. g. sashital, v. venditti, c. a. angers, g. cornilescu, s. e. butcher
  Keywords: wobble base-pairs, u2 snrna
  
• 2o5v.pdb. replication/recombination 06-dec-06 2o5v
  Title: recombination mediator recf
  Author: s. korolev, o. koroleva
  Keywords: walker a motif, p-loop, signature motif
  
• 2o6p.pdb. transport protein 08-dec-06 2o6p Cl Zn Fe
  Title: crystal structure of the heme-isdc complex
  Author: k. h. sharp, s. schneider, a. cockayne, m. paoli
  Keywords: protein-heme complex
  
• 2o9j.pdb. hydrolase 13-dec-06 2o9j Mg F Na
  Title: crystal structure of calcium atpase with bound magnesium fluoride and cyclopiazonic acid
  Author: h. s. young, k. a. moncoq
  Keywords: serca, x-ray crystallography, mycotoxin, cyclopiazonic acid
  
• 2oa0.pdb. hydrolase 14-dec-06 2oa0 Mg
  Title: crystal structure of calcium atpase with bound adp and cyclopiazonic acid
  Author: h. s. young, k. a. moncoq
  Keywords: serca, x-ray crystallography, mycotoxin, cyclopiazonic acid
  
• 2obj.pdb. transferase 19-dec-06 2obj Br
  Title: crystal structure of human pim-1 kinase in complex with inhibitor
  Author: n. yao, i. w. cheney, s. yan
  Keywords: pim-1, pim1, human pim-1 kinase, serine/threonine kinase, kinase inhibitor complex, pyridone, kinase inhibitor
  
• 2obl.pdb. hydrolase 19-dec-06 2obl Ca
  Title: structural and biochemical analysis of a prototypical atpase from the type iii secretion system of pathogenic bacteria
  Author: r. zarivach, m. vuckovic, w. deng, b. b. finlay, n. c. j. strynadka
  
  
• 2ode.pdb. signaling protein 22-dec-06 2ode Mg F Al
  Title: crystal structure of the heterodimeric complex of human rgs8 and activated gi alpha 3
  Author: c. gileadi, m. soundararajan, a. p. turnbull, j. m. elkins, e. papagrigoriou, a. c. w. pike, g. bunkoczi, f. gorrec, c. umeano, f. von delft, j. weigelt, a. edwards, c. h. arrowsmith, m. sundstrom, d. doyle, structural genomics consortium (sgc)
  Keywords: rgs, heterotrimeric g protein, signalling complex, structural genomics, structural genomics consortium, sgc
  
• 2odp.pdb. hydrolase 25-dec-06 2odp Mg
  Title: complement component c2a, the catalytic fragment of c3- and c5-convertase of human complement
  Author: s. v. l. narayana, v. krishnan
  Keywords: c3/c5 convertase, complement serine protease, human complement system, glycoprotein, sp, vwfa
  
• 2odq.pdb. hydrolase 25-dec-06 2odq
  Title: complement component c2a, the catalytic fragment of c3- and c5-convertase of human complement
  Author: s. v. l. narayana, v. krishnan
  Keywords: c3/c5 convertase, complement serine protease, human complement system, glycoprotein, sp, vwfa
  
• 2ofl.pdb. transcription 03-jan-07 2ofl Se
  Title: structural genomics, the crystal structure of a tetr-family transcriptional regulator from streptomyces coelicolor a3(2)
  Author: k. tan, x. xu, h. zheng, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: tetr-family transcriptional regulator, streptomyces coelicolor a3(2), structural genomics, psi-2, protein structure initiative, mcsg, midwest center for structural genomics
  
• 2ogg.pdb. transcription 05-jan-07 2ogg Na Se
  Title: structure of b. subtilis trehalose repressor (trer) effector binding domain
  Author: p. rezacova, v. krejcirikova, d. borek, s. f. moy, a. joachimiak, z. otwinowski, midwest center for structural genomics (mcsg)
  Keywords: sugar binding, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2ogu.pdb. metal binding protein 08-jan-07 2ogu
  Title: crystal structure of the isolated mthk rck domain
  Author: m. m. c. kuo, k. a. baker, l. wong, s. choe
  Keywords: rck, ktn
  
• 2ogv.pdb. transferase 09-jan-07 2ogv
  Title: crystal structure of the autoinhibited human c-fms kinase domain
  Author: m. walter, i. s. lucet, o. patel, s. e. broughton, r. bamert, n. k. williams, e. fantino, a. f. wilks, j. rossjohn
  Keywords: macrophage colony stimulating factor receptor
  
• 2oit.pdb. oncoprotein 11-jan-07 2oit
  Title: crystal structure of the n-terminal domain of the human proto-oncogene nup214/can
  Author: j. napetschnig, g. blobel, a. hoelz
  Keywords: x-ray crystallography, beta-propeller, structure, mrna export, npc assembly, leukemia, nup214/can fusion, dbp5/ddx19
  
• 2ojg.pdb. transferase 12-jan-07 2ojg
  Title: crystal structure of erk2 in complex with n,n-dimethyl-4-(4- phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
  Author: x. xie, m. d. jacobs
  
  
• 2oji.pdb. transferase 12-jan-07 2oji Cl
  Title: crystal structure of erk2 in complex with n-benzyl-4-(4-(3- chlorophenyl)-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
  Author: x. xie, m. d. jacobs
  
  
• 2ojj.pdb. transferase 12-jan-07 2ojj Cl F
  Title: crystal structure of erk2 in complex with (s)-n-(1-(3- chloro-4-fluorophenyl)-2-hydroxyethyl)-4-(4-(3- chlorophenyl)-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
  Author: x. xie, m. d. jacobs
  
  
• 2ok1.pdb. transferase 15-jan-07 2ok1 Cl
  Title: crystal structure of jnk3 bound to n-benzyl-4-(4-(3- chlorophenyl)-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
  Author: x. xie, m. d. jacobs
  
  
• 2okq.pdb. structural genomics, unknown function 17-jan-07 2okq Na
  Title: crystal structure of unknown conserved ybaa protein from shigella flexneri
  Author: g. minasov, i. i. vorontsov, l. shuvalova, j. s. brunzelle, o. kiryukhina, f. r. collart, a. joachimiak, w. f. anderson, midwest center for structural genomics (mcsg)
  Keywords: ybaa protein, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2okr.pdb. transferase 17-jan-07 2okr
  Title: crystal structure of the p38a-mapkap kinase 2 heterodimer
  Author: e. ter haar
  Keywords: nls, nes, heterodimer, docking groove
  
• 2ola.pdb. ligase 18-jan-07 2ola
  Title: crystal structure of o-succinylbenzoic acid synthetase from staphylococcus aureus, cubic crystal form
  Author: y. patskovsky, j. m. sauder, s. ozyurt, s. r. wasserman, d. smith, m. dickey, m. maletic, c. reyes, t. gheyi, j. a. gerlt, s. c. almo, s. k. burley, new york structural genomix research consortium (nysgxrc)
  Keywords: nysgxrc
  
• 2olg.pdb. hydrolase 19-jan-07 2olg Ca
  Title: crystal structure of the serine protease domain of prophenoloxidase activating factor-i in a zymogen form
  Author: n. c. ha, s. piao
  Keywords: ppaf-i, serine protease
  
• 2olt.pdb. structural genomics, unknown function 19-jan-07 2olt Cl Se
  Title: crystal structure of np_719307.1 from shewanella oneidensis at 2.00 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: duf47, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2ome.pdb. oxidoreductase 22-jan-07 2ome
  Title: crystal structure of human ctbp2 dehydrogenase complexed with nad(h)
  Author: e. s. pilka, k. guo, a. rojkova, j. e. debreczeni, k. l. kavanagh, f. von delft, c. h. arrowsmith, j. weigelt, a. edwards, m. sundstrom, u. oppermann, structural genomics consortium (sgc)
  Keywords: ctbp2, dehydrogenase, structural genomics consortium, sgc
  
• 2omk.pdb. transferase 22-jan-07 2omk
  Title: structure of the bacteroides thetaiotaomicron thiamin pyrophosphokinase
  Author: i. i. vorontsov, g. minasov, l. shuvalova, j. abdullah, f. r. collart, a. joachimiak, w. f. anderson, midwest center for structural genomics (mcsg)
  Keywords: succinimide, thiamin pyrophosphokinase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2onf.pdb. structural genomics, unknown function 23-jan-07 2onf Se
  Title: crystal structure of hypothetical protein (np_393673.1) from thermoplasma acidophilum at 1.70 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: hypothetical protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2onl.pdb. transferase 24-jan-07 2onl
  Title: crystal structure of the p38a-mapkap kinase 2 heterodimer
  Author: e. ter haar
  Keywords: kinase, nls, nes, docking groove
  
• 2onu.pdb. ligase 24-jan-07 2onu
  Title: plasmodium falciparum ubiquitin conjugating enzyme pf10_0330, putative homologue of human ube2h
  Author: a. dong, j. lew, l. lin, a. hassanali, y. zhao, g. senisterra, g. wasney, m. vedadi, i. kozieradzki, a. bochkarev, c. h. arrowsmith, a. m. edwards, m. sundstrom, j. weigelt, r. hui, s. j. brokx, structural genomics consortium (sgc)
  
  
• 2onv.pdb. protein fibril 24-jan-07 2onv
  Title: crystal structure of the amyloid-fibril forming peptide ggvvia derived from the alzheimer's amyloid abeta (abeta37- 42).
  Author: s. sambashivan, m. r. sawaya, d. eisenberg
  Keywords: beta sheets
  
• 2onw.pdb. protein fibril 24-jan-07 2onw
  Title: structure of sstssa, a fibril forming peptide from bovine pancreatic ribonuclease (rnase a, residues 15-20)
  Author: s. sambashivan, m. r. sawaya, d. eisenberg
  Keywords: steric zipper
  
• 2onx.pdb. protein fibril 24-jan-07 2onx
  Title: nnqq peptide corresponding to residues 8-11 of yeast prion sup35 (alternate crystal form)
  Author: m. r. sawaya, s. sambashivan, r. nelson, m. ivanova, s. a. sievers, m. i. apostol, m. j. thompson, m. balbirnie, j. j. wiltzius, h. mcfarlane, a. o. madsen, c. riekel, d. eisenberg
  Keywords: beta sheets
  
• 2oo2.pdb. structural genomics, unknown function 25-jan-07 2oo2
  Title: crystal structure of the hypothetical af_1782 protein from archaeoglobus fulgidus
  Author: j. b. bonanno, m. rutter, k. t. bain, j. adams, v. sridhar, l. smyth, j. freeman, s. atwell, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: unknown function, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2oo3.pdb. structural genomics, unknown function 25-jan-07 2oo3
  Title: crystal structure of the hypothetical lpl1258 protein from legionella pneumophila
  Author: j. b. bonanno, j. freeman, k. t. bain, a. slocombe, c. reyes, s. ozyurt, l. smyth, s. atwell, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: unknown function, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2oo6.pdb. isomerase 25-jan-07 2oo6
  Title: crystal structure of hypothetical l-alanine-dl-glutamate epimerase from burkholderia xenovorans strain lb400
  Author: j. b. bonanno, m. dickey, k. t. bain, b. wu, v. sridhar, j. freeman, l. smyth, s. atwell, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: enolase, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2oo9.pdb. ligase 25-jan-07 2oo9 Se
  Title: crystal structure of the uba domain from human c-cbl ubiquitin ligase
  Author: g. kozlov, k. gehring
  Keywords: homodimer
  
• 2ooa.pdb. ligase 25-jan-07 2ooa Se
  Title: crystal structure of the uba domain from cbl-b ubiquitin ligase
  Author: g. kozlov, k. gehring
  
  
• 2oob.pdb. ligase 25-jan-07 2oob
  Title: crystal structure of the uba domain from cbl-b ubiquitin ligase in complex with ubiquitin
  Author: g. kozlov, k. gehring
  
  
• 2ooc.pdb. transferase 25-jan-07 2ooc Se
  Title: crystal structure of histidine phosphotransferase shpa (np_419930.1) from caulobacter crescentus at 1.52 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: hypothetical protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2oog.pdb. hydrolase 25-jan-07 2oog Zn
  Title: crystal structure of glycerophosphoryl diester phosphodiesterase from staphylococcus aureus
  Author: y. patskovsky, e. fedorov, r. toro, j. m. sauder, d. smith, j. freeman, m. maletic, a. powell, t. gheyi, s. r. wasserman, s. c. almo, s. k. burley, new york structural genomix research consortium (nysgxrc)
  Keywords: glycerophosphoryl diester phosphodiesterase, structural genomics, protein structure initiative, psi, new york structural genomix research consortium, nysgrc, nysgxrc
  
• 2ooj.pdb. structural genomics, unknown function 25-jan-07 2ooj Se
  Title: crystal structure of hypothetical protein (np_717203.1) from shewanella oneidensis at 1.84 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: hypothetical protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2ook.pdb. structural genomics, unknown function 25-jan-07 2ook Se
  Title: crystal structure of hypothetical protein (yp_749275.1) from shewanella frigidimarina ncimb 400 at 1.80 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: hypothetical protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2oox.pdb. transferase 26-jan-07 2oox
  Title: crystal structure of the adenylate sensor from amp- activated protein kinase complexed with amp
  Author: r. townley, l. shapiro
  Keywords: kinase, amp, crystal structure
  
• 2ooy.pdb. transferase 26-jan-07 2ooy
  Title: crystal structure of the adenylate sensor from amp- activated protein kinase complexed with atp
  Author: r. townley, l. shapiro
  Keywords: kinase, amp, crystal structure
  
• 2op5.pdb. structural genomics, unknown function 26-jan-07 2op5 Se
  Title: crystal structure of hypothetical protein (jcvi_pep_1096672785533) from an environmental metagenome (unidentified marine microbe), sorcerer ii global ocean sampling experiment at 2.20 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: metagenomics, hypothetical protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2opo.pdb. allergen 29-jan-07 2opo Ca
  Title: crystal structure of the calcium-binding pollen allergen che a 3
  Author: p. verdino, w. keller
  Keywords: dimer, domain-swapping, ef-hand