Recent PDB releases or updates: week of 26 January 2007

• 1sv2.pdb. hydrolase 27-mar-04 1sv2 Zn
  Title: crystal structure of peptide deformylase from leptospira interrogans (lipdf) at ph7.5
  Author: z. zhou, x. song, y. li, w. gong
  Keywords: dimer
  
• 1szz.pdb. hydrolase 06-apr-04 1szz Zn
  Title: crystal structure of peptide deformylase from leptospira interrogans complexed with inhibitor actinonin
  Author: z. zhou, x. song, y. li, w. gong
  Keywords: bb2 complexed
  
• 1vev.pdb. hydrolase 06-apr-04 1vev Zn
  Title: crystal structure of peptide deformylase from leptospira interrogans (lipdf) at ph6.5
  Author: z. zhou, x. song, y. li, w. gong
  Keywords: mes
  
• 1vey.pdb. hydrolase 06-apr-04 1vey Zn
  Title: crystal structure of peptide deformylase from leptospira interrogans (lipdf) at ph7.0
  Author: z. zhou, x. song, y. li, w. gong
  Keywords: hepes
  
• 1vez.pdb. hydrolase 06-apr-04 1vez Zn
  Title: crystal structure of peptide deformylase from leptospira interrogans(lipdf) at ph8.0
  Author: z. zhou, x. song, y. li, w. gong
  
  
• 1yon.pdb. oxidoreductase 28-jan-05 1yon
  Title: escherichia coli ketopantoate reductase in complex with 2- monophosphoadenosine-5'-diphosphate
  Author: a. ciulli, c. m. c. lobley, k. l. tuck, g. williams, a. g. smith, t. l. blundell, c. abell
  Keywords: nadp+ dependent, 2'-monophosphoadenosine-5'- diphosphate, pantothenate pathway, secondary alcohol dehydrogenase
  
• 1zev.pdb. ribonucleic acid 19-apr-05 1zev
  Title: crystal structure of a pathogenic rna: cug repeats
  Author: b. h. mooers, j. s. logue, j. a. berglund
  Keywords: triplet repeats, causitive agent of myotonic dystrophy type i
  
• 2bve.pdb. lectin/immnue system 15-dec-04 2bve
  Title: structure of the n-terminal of sialoadhesin in complex with 2-phenyl-prop5ac
  Author: n. r. zaccai, a. p. may, r. c. robinson, l. d. burtnick, p. crocker, r. brossmer, s. kelm, e. y. jones
  Keywords: immunoglobulin superfamily, carbohydrate binding, siglec, inhibitor design, cell adhesion
  
• 2cdm.pdb. dna-protein complex 25-jan-06 2cdm Se
  Title: the structure of trwc complexed with a 27-mer dna comprising the recognition hairpin and the cleavage site
  Author: r. boer, s. russi, a. guasch, m. lucas, a. g. blanco, r. perez-luque, m. coll, f. de la cruz
  Keywords: bacterial conjugation, dna transfer, dna-protein complex
  
• 2d9s.pdb. ligase 13-dec-05 2d9s (NMR, 20 structures)
  Title: solution structure of rsgi ruh-049, a uba domain from mouse cdna
  Author: t. hamada, h. hirota, y. -j. lin, p. guntert, c. kurosaki, k. izumi, m. yoshida, s. koshiba, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: uba domain, dimer, protein binding, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dco.pdb. membrane protein 11-jan-06 2dco (NMR, 10 structures)
  Title: s1p4 first extracellular loop peptidomimetic
  Author: t. c. t. pham, r. w. kriwacki, a. l. parrill
  Keywords: disulfide, helix-turn-helix, 3-10 helix
  
• 2dcv.pdb. antimicrobial protein 16-jan-06 2dcv (NMR, 20 structures)
  Title: the solution structure of horseshoe crab antimicrobial peptide tachystatin b with the inhibitory cystine-knot motif
  Author: n. fujitani, t. kohno
  Keywords: cystine-knot
  
• 2dcw.pdb. antimicrobial protein 16-jan-06 2dcw (NMR, 20 structures)
  Title: the solution structure of horseshoe crab antimicrobial peptide tachystatin b with the inhibitory cystine-knot motif
  Author: n. fujitani, k. kawano
  Keywords: cystine-knot
  
• 2dd7.pdb. luminescent protein 23-jan-06 2dd7 Cl
  Title: a gfp-like protein from marine copepod, chiridius poppei
  Author: k. suto, h. masuda, y. takenaka, h. mizuno
  
  
• 2dd9.pdb. luminescent protein 24-jan-06 2dd9 Cl
  Title: a mutant of gfp-like protein from chiridius poppei
  Author: k. suto, h. masuda, y. takenaka, h. mizuno
  Keywords: fluorescent protein
  
• 2dfl.pdb. recombination 02-mar-06 2dfl
  Title: crystal structure of left-handed rada filament
  Author: l. chen, t. p. ko, t. f. wang, a. h. j. wang
  Keywords: filament, left-handed, dna binding, recombination, molecular switch, reca, rad51, dmc1
  
• 2dfx.pdb. hydrolase 06-mar-06 2dfx
  Title: crystal structure of the carboxy terminal domain of colicin e5 complexed with its inhibitor
  Author: s. yajima, s. inoue, t. ogawa, t. nonaka, k. ohsawa, h. masaki
  Keywords: protein-inhibitor protein complex
  
• 2djh.pdb. hydrolase 03-apr-06 2djh
  Title: crystal structure of the carboxy-terminal ribonuclease domain of colicin e5
  Author: s. yajima, s. inoue, t. ogawa, t. nonaka, k. ohsawa, h. masaki
  
  
• 2dpy.pdb. hydrolase 18-may-06 2dpy
  Title: crystal structure of the flagellar type iii atpase flii
  Author: k. imada, k. namba, t. minamino
  Keywords: alpha-beta structure
  
• 2dqb.pdb. hydrolase, dna binding protein 25-may-06 2dqb Mg Se
  Title: crystal structure of dntp triphosphohydrolase from thermus thermophilus hb8, which is homologous to dgtp triphosphohydrolase
  Author: n. kondo, n. nakagawa, a. ebihara, l. chen, z. -j. liu, b. -c. wang, s. yokoyama, s. kuramitsu, r. masui, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi
  
• 2dqc.pdb. immune system/hydrolase 25-may-06 2dqc
  Title: crystal structure of hyhel-10 fv mutant(hy33f) complexed with hen egg lysozyme
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: mutant
  
• 2dqd.pdb. immune system/hydrolase 25-may-06 2dqd
  Title: crystal structure of hyhel-10 fv mutant (hy50f) complexed with hen egg lysozyme
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: mutant
  
• 2dqe.pdb. immune system/hydrolase 25-may-06 2dqe
  Title: crystal structure of hyhel-10 fv mutant (hy53a) complexed with hen egg lysozyme
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: mutant
  
• 2dqf.pdb. immune system/hydrolase 25-may-06 2dqf
  Title: crystal structure of hyhel-10 fv mutant (y33ay53a) complexed with hen egg lysozyme
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: mutant
  
• 2dqg.pdb. immune system/hydrolase 25-may-06 2dqg
  Title: crystal structure of hyhel-10 fv mutant (hy53f) complexed with hen egg lysozyme
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: mutant
  
• 2dqh.pdb. immune system/hydrolase 26-may-06 2dqh
  Title: crystal structure of hyhel-10 fv mutant (hy58a) complexed with hen egg lysozyme
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: mutant
  
• 2dqi.pdb. immune system/hydrolase 26-may-06 2dqi
  Title: crystal structure of hyhel-10 fv mutant (ly50a) complexed with hen egg lysozyme
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  Keywords: mutant
  
• 2dqj.pdb. immune system/hydrolase 26-may-06 2dqj
  Title: crystal structure of hyhel-10 fv (wild-type) complexed with hen egg lysozyme at 1.8a resolution
  Author: m. shiroishi, h. kondo, k. tsumoto, i. kumagai
  
  
• 2dt5.pdb. dna binding protein 11-jul-06 2dt5 Cl
  Title: crystal structure of ttha1657 (at-rich dna-binding protein) from thermus thermophilus hb8
  Author: a. nakamura, a. sosa, h. komori, a. kita, k. miki
  Keywords: nadh, nad, rossmann fold, redox sensing, winged helix, thermus themophilus
  
• 2dud.pdb. dna binding protein 21-jul-06 2dud
  Title: crystal structure of human mitochondrial single-stranded dna-binding protein(hmtssb)
  Author: x. dong, y. bessho, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: ssb, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dyb.pdb. oxidoreductase 08-sep-06 2dyb As
  Title: the crystal structure of human p40(phox)
  Author: k. honbou
  Keywords: nadph oxidase
  
• 2dyt.pdb. ligase 17-sep-06 2dyt
  Title: the crystal structure of saccharomyces cerevisiae atg3
  Author: y. yamada, n. n. suzuki, f. inagaki
  
  
• 2e1n.pdb. circadian clock protein 26-oct-06 2e1n
  Title: crystal structure of the cyanobacterium circadian clock modifier pex
  Author: k. arita, t. shimizu
  Keywords: dna binding protein
  
• 2e45.pdb. protein binding 04-dec-06 2e45 (NMR, 25 structures)
  Title: solution structure of fe65 ww domain
  Author: t. kouno, m. mizuguchi, y. nozawa, t. sugaya, k. kawano
  
  
• 2e4o.pdb. lyase 15-dec-06 2e4o Cl
  Title: x-ray crystal structure of aristolochene synthase from aspergillus terreus and the evolution of templates for the cyclization of farnesyl diphosphate
  Author: e. y. shishova, l. di costanzo, d. e. cane, d. w. christianson
  Keywords: farnesyl diphosphate
  
• 2e6u.pdb. structural genomics, unknown function 03-jan-07 2e6u Cl Ca
  Title: crystal structure of hypothetical protein ph1109 from pyrococcus horikoshii
  Author: y. kitago, y. min, n. watanabe, i. tanaka
  Keywords: coa binding, structural genomics consortium for research on gene expression system
  
• 2fcd.pdb. cell cycle 12-dec-05 2fcd (NMR)
  Title: solution structure of n-lobe myosin light chain from saccharomices cerevisiae
  Author: d. o. cicero, m. pennestri, g. m. contessa, m. paci, a. ragnini-wilson, s. melino
  
  
• 2fce.pdb. cell cycle 12-dec-05 2fce (NMR, 20 structures)
  Title: solution structure of c-lobe myosin light chain from saccharomices cerevisiae
  Author: d. o. cicero, m. pennestri, g. m. contessa, m. paci, a. ragnini-wilson, s. melino
  
  
• 2fei.pdb. structural protein 15-dec-05 2fei (NMR, 20 structures)
  Title: solution structure of the second sh3 domain of human cms protein
  Author: b. yao, h. dai, y. jiao, j. wu, y. shi
  
  
• 2flr.pdb. hydrolase/blood clotting 06-jan-06 2flr
  Title: novel 5-azaindole factor viia inhibitors
  Author: j. r. riggs, h. hu, a. kolesnikov, z. tong, e. m. leahy, k. e. wesson, w. d. shrader, d. vijaykumar, t. a. wahl, p. a. sprengeler, m. j. green, c. yu, b. a. katz, w. b. young
  Keywords: 5-azaindole inhibitors, s1 site
  
• 2fn7.pdb. oxidoreductase 10-jan-06 2fn7
  Title: crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with substrate (lactic acid) and cofactor (b-nicotinamide adenine dinucleotide)
  Author: o. a. senkovich, d. chattopadhyay
  
  
• 2fnz.pdb. oxidoreductase 12-jan-06 2fnz
  Title: crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with cofactor (b- nicotinamide adenine dinucleotide) and inhibitor (oxamic acid)
  Author: o. a. senkovich, d. chattopadhyay
  
  
• 2fpt.pdb. oxidoreductase 17-jan-06 2fpt F
  Title: dual binding mode of a novel series of dhodh inhibitors
  Author: r. baumgartner, m. walloschek, m. kralik, a. gotschlich, s. tasler, j. leban
  
  
• 2fpv.pdb. oxidoreductase 17-jan-06 2fpv F
  Title: dual binding mode of a novel series of dhodh inhibitors
  Author: r. baumgartner, j. leban
  
  
• 2fpy.pdb. oxidoreductase 17-jan-06 2fpy F
  Title: dual binding mode of a novel series of dhodh inhibitors
  Author: r. baumgartner, j. leban
  
  
• 2fqi.pdb. oxidoreductase 18-jan-06 2fqi F
  Title: dual binding modes of a novel series of dhodh inhibitors
  Author: r. baumgartner, j. leban
  
  
• 2fza.pdb. deoxyribonucleic acid 09-feb-06 2fza Br Na Ca
  Title: crystal structure of d(gcgggagc): the base-intercalated duplex
  Author: j. kondo, t. ciengshin, e. c. m. juan, k. mitomi, a. takenaka
  Keywords: base-intercalated motif, sheared g:a pair, dna, dna hexaplex, deoxyribonucleic acid
  
• 2gb8.pdb. oxidoreductase/electron transport 10-mar-06 2gb8 Fe (NMR, 20 structures)
  Title: solution structure of the complex between yeast iso-1- cytochrome c and yeast cytochrome c peroxidase
  Author: a. n. volkov, j. a. r. worrall, m. ubbink
  Keywords: electron transfer, transient complex
  
• 2gbl.pdb. circadian clock protein, transferase 10-mar-06 2gbl Mg
  Title: crystal structure of full length circadian clock protein kaic with phosphorylation sites
  Author: r. pattanayek, d. r. williams, s. pattanayek, y. xu, t. mori, c. h. johnson, p. l. stewart, m. egli
  Keywords: circadian, kaia, kaib, kaic, hexamer,
  
• 2gjk.pdb. hydrolase 31-mar-06 2gjk Mg
  Title: structural and functional insights into the human upf1 helicase core
  Author: z. cheng, d. muhlrad, r. parker, h. song
  Keywords: helicase, nmd
  
• 2gk6.pdb. hydrolase 31-mar-06 2gk6 Mg
  Title: structural and functional insights into the human upf1 helicase core
  Author: z. cheng, d. muhlrad, r. parker, h. song
  Keywords: helicase, nmd
  
• 2gk7.pdb. hydrolase 31-mar-06 2gk7
  Title: structural and functional insights into the human upf1 helicase core
  Author: z. cheng, d. muhlrad, r. parker, h. song
  Keywords: helicase, nmd
  
• 2gn0.pdb. lyase 09-apr-06 2gn0 Na
  Title: crystal structure of dimeric biodegradative threonine deaminase (tdcb) from salmonella typhimurium at 1.7 a resolution (triclinic form with one complete subunit built in alternate conformation)
  Author: d. k. simanshu, h. s. savithri, m. r. murthy
  Keywords: biodegradative threonine deaminase, plp,threonine dehydratase, l-threonine metabolism, alternate conformation
  
• 2gn1.pdb. lyase 09-apr-06 2gn1 Na
  Title: crystal structure of dimeric biodegradative threonine deaminase (tdcb) from salmonella typhimurium at 2.2a resolution (triclinic form with one dimer of tdcb in the asymmetric unit)
  Author: d. k. simanshu, h. s. savithri, m. r. n. murthy
  Keywords: biodegradative threonine deaminase, plp, cmp, threonine dehydratase, l-threonine metabolism
  
• 2gn2.pdb. lyase 09-apr-06 2gn2 Na
  Title: crystal structure of tetrameric biodegradative threonine deaminase (tdcb) from salmonella typhimurium in complex with cmp at 2.5a resolution (hexagonal form)
  Author: d. k. simanshu, h. s. savithri, m. r. n. murthy
  Keywords: biodegradative threonine deaminase, plp, cmp, threonine dehydratase, l-threonine metabolism
  
• 2gop.pdb. hydrolase 13-apr-06 2gop
  Title: the beta-propeller domain of the trilobed protease from pyrococcus furiosus reveals an open velcro topology
  Author: j. bosch, t. tamura, n. tamura, w. baumeister, l. -o. essen
  Keywords: open velcro
  
• 2gqt.pdb. oxidoreductase 21-apr-06 2gqt Ca
  Title: crystal structure of udp-n-acetylenolpyruvylglucosamine reductase (murb) from thermus caldophilus
  Author: m. -k. kim, s. h. eom
  Keywords: enolpyruvyl-udp-n- acetylglucosamine, flavin adenine dinucleotide, substrate complex, enzyme
  
• 2gqu.pdb. oxidoreductase 21-apr-06 2gqu
  Title: crystal structure of udp-n-acetylenolpyruvylglucosamine reductase (murb) from thermus caldophilus
  Author: s. h. eom, m. -k. kim
  Keywords: enolpyruvyl-udp-n- acetylglucosamine, flavin adenine dinucleotide, substrate complex, enzyme
  
• 2gvf.pdb. hydrolase 02-may-06 2gvf Zn
  Title: hcv ns3-4a protease domain complexed with a macrocyclic ketoamide inhibitor, sch419021
  Author: a. arasappan, f. g. njoroge, k. x. chen, s. venkatraman, t. n. parekh, h. gu, j. pichardo, n. butkiewicz, a. prongay, v. madison, v. girijavallabhan
  Keywords: protease, ketoamide inhibitor
  
• 2h2m.pdb. metal transport 19-may-06 2h2m (NMR, 20 structures)
  Title: solution structure of the n-terminal domain of commd1 (murr1)
  Author: m. sommerhalter, y. zhang, a. c. rosenzweig
  
  
• 2h4e.pdb. transport protein 24-may-06 2h4e
  Title: crystal structure of cys10 sulfonated transthyretin
  Author: l. gales, a. m. damas
  Keywords: sulfite, transthyretin, familial amyloidotic polyneuropathy
  
• 2haz.pdb. cell adhesion 13-jun-06 2haz Na
  Title: crystal structure of the first fibronectin domain of human ncam1
  Author: n. sekulic, a. lavie
  Keywords: fn1, ncam, beta sandwich
  
• 2hcv.pdb. isomerase, metal-binding protein 19-jun-06 2hcv Zn
  Title: crystal structure of l-rhamnose isomerase from pseudomonas stutzeri with metal ion
  Author: h. yoshida, m. yamada, g. takada, k. izumori, s. kamitori
  Keywords: tim barrel, homo-tetramer, metal-binding protein
  
• 2hhp.pdb. transferase 28-jun-06 2hhp Mg
  Title: structure of yeast poly(a) polymerase in a closed conformation.
  Author: a. bohm, j. toth
  
  
• 2hiz.pdb. hydrolase 29-jun-06 2hiz
  Title: crystal structure of human beta-secretase (bace) in the presence of an inhibitor
  Author: t. e. benson, d. b. prince, a. g. tomasselli, t. l. emmons, d. j. paddock
  
  
• 2hlb.pdb. signaling protein 06-jul-06 2hlb
  Title: a structural basis for nucleotide exchange on g-alpha-i subunits and receptor coupling specificity
  Author: c. a. johnston, d. p. siderovski, v. j. watts
  
  
• 2hm1.pdb. hydrolase 10-jul-06 2hm1 F
  Title: crystal structure of human beta-secretase (bace) in the presence of an inhibitor (2)
  Author: t. e. benson, d. b. prince, a. g. tomasselli, t. l. emmons, d. j. paddock
  
  
• 2hq2.pdb. oxidoreductase 18-jul-06 2hq2 Fe
  Title: structure of the escherichia coli o157:h7 heme oxygenase chus in complex with heme
  Author: m. d. l. suits, n. jaffer, z. jia, montreal-kingston bacterial structural genomics initiative (bsgi)
  Keywords: heme, structural repeat, structural genomics, montreal-kingston bacterial structural genomics initiative, bsgi
  
• 2hqt.pdb. biosynthetic protein, rna binding 19-jul-06 2hqt
  Title: crystal structures of the interacting domains from yeast glutamyl-trna synthetase and trna aminoacylation and nuclear export cofactor arc1p reveal a novel function for an old fold
  Author: h. simader, m. hothorn, d. suck
  
  
• 2hr8.pdb. transferase 20-jul-06 2hr8 Pt
  Title: crystal structure of ph0725 from pyrococcus horikoshii ot3
  Author: h. yamamoto, m. taketa, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: methyltransferase, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2hra.pdb. ligase 20-jul-06 2hra I
  Title: crystal structures of the interacting domains from yeast glutamyl-trna synthetase and trna aminoacylation and nuclear export cofactor arc1p reveal a novel function for an old fold
  Author: h. simader, m. hothorn, d. suck
  
  
• 2hta.pdb. isomerase 25-jul-06 2hta
  Title: crystal structure of a putative mutarotase (yead) from salmonella typhimurium in orthorhombic form
  Author: s. chittori, d. k. simanshu, h. s. savithri, m. r. n. murthy
  Keywords: carbohydrate, aldose 1-epimerase, mutarotase, yead, galm, sugar phosphate
  
• 2htb.pdb. isomerase 25-jul-06 2htb
  Title: crystal structure of a putative mutarotase (yead) from salmonella typhimurium in monoclinic form
  Author: s. chittori, d. k. simanshu, h. s. savithri, m. r. n. murthy
  Keywords: carbohydrate, aldose 1-epimerase, mutarotase, yead, galm, sugar phosphate
  
• 2hwv.pdb. transcription 02-aug-06 2hwv
  Title: crystal structure of an essential response regulator dna binding domain, vicrc in enterococcus faecalis, a member of the yycf subfamily.
  Author: c. h. trinh, y. liu, s. e. v. phillips, m. k. phillips-jones
  Keywords: c-terminal domain, dna- binding domain
  
• 2hze.pdb. electron transport, oxidoreductase 08-aug-06 2hze As
  Title: crystal structures of a poxviral glutaredoxin in the oxidized and reduced states show redox-correlated structural changes
  Author: j. p. bacik, b. hazes
  Keywords: arsenic, dimethylarsenite.
  
• 2hzf.pdb. electron transport, oxidoreductase 08-aug-06 2hzf
  Title: crystal structures of a poxviral glutaredoxin in the oxidized and reduced states show redox-correlated structural changes
  Author: j. p. bacik, b. hazes
  
  
• 2i0b.pdb. membrane protein 10-aug-06 2i0b
  Title: crystal structure of the glur6 ligand binding core elkq mutant dimer at 1.96 angstroms resolution
  Author: m. l. mayer
  
  
• 2i0c.pdb. membrane protein 10-aug-06 2i0c
  Title: crystal structure of the glur6 ligand binding core dimer crosslinked by disulfide bonds between y490c and l752c at 2.25 angstroms resolution
  Author: m. l. mayer
  
  
• 2i1j.pdb. cell adhesion, membrane protein 14-aug-06 2i1j Cl
  Title: moesin from spodoptera frugiperda at 2.1 angstroms resolution
  Author: q. li, m. r. nance, j. j. g. tesmer
  Keywords: coiled-coil, c-ermad, erm, moesin, radixin, ezrin, merlin, actin binding, masking, regulation, self-inhibition
  
• 2i1k.pdb. cell adhesion, membrane protein 14-aug-06 2i1k Cl
  Title: moesin from spodoptera frugiperda reveals the coiled-coil domain at 3.0 angstrom resolution
  Author: m. r. nance, j. j. g. tesmer
  Keywords: coiled-coil, c-ermad, erm, moesin, radixin, ezrin, merlin, actin binding, masking, regulation, self-inhibition
  
• 2i46.pdb. protein binding 21-aug-06 2i46
  Title: crystal structure of human tpp1
  Author: f. wang, e. r. podell, a. j. zaug, y. t. yang, p. baciu, t. else, g. d. hammer, t. r. cech, m. lei
  Keywords: ob fold, pot1 binding
  
• 2i56.pdb. isomerase, metal-binding protein 24-aug-06 2i56 Zn
  Title: crystal structure of l-rhamnose isomerase from pseudomonas stutzeri with l-rhamnose
  Author: h. yoshida, m. yamada, g. takada, k. izumori, s. kamitori
  Keywords: tim barrel, homo-tetramer, metal-binding protein
  
• 2i57.pdb. isomerase, metal-binding protein 24-aug-06 2i57 Zn
  Title: crystal structure of l-rhamnose isomerase from pseudomonas stutzeri in complex with d-allose
  Author: h. yoshida, m. yamada, g. takada, k. izumori, s. kamitori
  Keywords: tim barrel, homo-tetramer, metal-binding protein
  
• 2i89.pdb. electron transport 01-sep-06 2i89 Mg Fe
  Title: structure of septuple mutant of rat outer mitochondrial membrane cytochrome b5
  Author: s. terzyan, x. c zhang, d. r. benson, l. wang, n. sun
  Keywords: x-ray diffraction, heme
  
• 2i8b.pdb. viral protein 01-sep-06 2i8b Se
  Title: crystal structure of the c-terminal domain of ebola virus vp30
  Author: t. m. muziol, b. hartlieb, s. becker, w. weissenhorn
  Keywords: transcription, rna binding
  
• 2ieh.pdb. hydrolase 19-sep-06 2ieh Cl Mg K
  Title: crystal structure of human kinesin eg5 in complex with (r)- mon97, a new monastrol-based inhibitor that binds as (r)- enantiomer
  Author: i. garcia-saez, f. kozielski
  Keywords: flanked by three alpha-helices on each side
  
• 2iej.pdb. transferase 19-sep-06 2iej Zn
  Title: human protein farnesyltransferase complexed with inhibitor compound stn-48 and fpp analog at 1.8a resolution
  Author: m. a. hast, l. s. beese
  Keywords: farnesyltransferase, farnesyl transferase, caax, ras, cancer, tumor regression, stn-48, protein prenylation, lipid modification, plasmodium, falciparum, malaria
  
• 2iew.pdb. transferase 19-sep-06 2iew Ca
  Title: crystal structure of inositol phosphate multikinase ipk2 from s. cerevisiae
  Author: w. holmes, g. jogl
  
  
• 2if8.pdb. transferase 20-sep-06 2if8 Mn Ca
  Title: crystal structure of inositol phosphate multikinase ipk2 in complex with adp and mn2+ from s. cerevisiae
  Author: w. holmes, g. jogl
  
  
• 2ifr.pdb. hydrolase 21-sep-06 2ifr
  Title: crystal structure of scytalido-glutamic peptidase with a peptide based transition state analog
  Author: b. pillai, m. m. cherney, k. hiraga, k. takada, k. oda, m. n. james
  Keywords: enzyme-transition state analog complex
  
• 2ifw.pdb. hydrolase 21-sep-06 2ifw
  Title: crystal structure of scytalido-glutamic peptidase with a transition state analog inhibitor
  Author: b. pillai, m. m. cherney, k. hiraga, k. takada, k. oda, m. n. james
  Keywords: enzyme-inhibitor complex
  
• 2ify.pdb. isomerase 21-sep-06 2ify Mn
  Title: structure of bacillus anthracis cofactor-independent phosphoglucerate mutase
  Author: m. nukui, j. e. littlejohn, m. j. jedrzejas
  Keywords: glygolysis, gram-posotive bacteria, spores, catalytic mechanism, phosphoglycerate, bacillus anthracis
  
• 2igp.pdb. cell cycle 22-sep-06 2igp
  Title: crystal structure of hec1 ch domain
  Author: r. r. wei, s. c. harrison
  Keywords: alpha helices
  
• 2ihm.pdb. transferase/dna 26-sep-06 2ihm Mg Na
  Title: polymerase mu in ternary complex with gapped 11mer dna duplex and bound incoming nucleotide
  Author: a. f. moon, l. c pedersen, t. a. kunkel
  Keywords: helix-turn-helix
  
• 2ihq.pdb. hormone/growth factor 27-sep-06 2ihq
  Title: crystal structure of the rat androgen receptor ligand binding domian complex with an n-aryl- hydroxybicyclohydantoin
  Author: j. s. sack
  Keywords: steroid receptor, nuclear receptor, transcription regulation, ligand-binding domain
  
• 2ihx.pdb. viral protein/rna 27-sep-06 2ihx Zn (NMR, 20 structures)
  Title: solution structure of the rous sarcoma virus nucleocapsid protein:upsi rna packaging signal complex
  Author: j. zhou, m. summers
  
  
• 2iim.pdb. signaling protein 28-sep-06 2iim Zn Ca
  Title: sh3 domain of human lck
  Author: j. romir, c. egerer-sieber, y. a. muller
  
  
• 2imt.pdb. apoptosis 04-oct-06 2imt Zn
  Title: the x-ray structure of a bak homodimer reveals an inhibitory zinc binding site
  Author: t. moldoveanu, q. liu, a. tocilj, m. watson, g. c. shore, k. b. gehring
  
  
• 2ipi.pdb. oxidoreductase 12-oct-06 2ipi
  Title: crystal structure of aclacinomycin oxidoreductase
  Author: a. sultana, i. kursula, g. schneider, i. alexeev, j. niemi, p. mantsala
  Keywords: aclacinomycin, oxidoreductase, flavoenzyme, twinning,mad
  
• 2irv.pdb. membrane protein 16-oct-06 2irv
  Title: crystal structure of glpg, a rhomboid intramembrane serine protease
  Author: e. bibi, d. fass, a. ben-shem
  Keywords: cavity, ser-his dyad
  
• 2irw.pdb. oxidoreductase 16-oct-06 2irw
  Title: human 11-beta-hydroxysteroid dehydrogenase (hsd1) with nadp and adamantane ether inhibitor
  Author: k. l. longenecker, j. r patel, j. russell, w. qin
  Keywords: nadp, inhibitor
  
• 2isa.pdb. oxidoreductase 17-oct-06 2isa Cl Fe
  Title: crystal structure of vibrio salmonicida catalase
  Author: e. k. riise, m. s. lorentzen, r. helland, a. o. smalas, h. k. s. leiros, n. p. willassen
  Keywords: heme, oxidoreductase, iron, 3d-structure, hydrogen peroxide
  
• 2iup.pdb. oxidoreductase 07-jun-06 2iup
  Title: crystal structure of dithionite-reduced aromatic amine dehydrogenase (aadh) from alcaligenes faecalis
  Author: a. roujeinikova, n. scrutton, d. leys
  
  
• 2iyo.pdb. oxidoreductase 21-jul-06 2iyo As
  Title: structural characterization of a bacterial 6pdh reveals aspects of specificity, mechanism and mode of inhibition
  Author: r. sundaramoorthy, j. iulek, w. n. hunter
  Keywords: nadp, pentose shunt, oxidoreductase,gluconate utilization
  
• 2iyp.pdb. oxidoreductase 21-jul-06 2iyp
  Title: product rup
  Author: r. sundaramoorthy, j. iulek, w. n. hunter
  Keywords: nadp, pentose shunt, oxidoreductase,gluconate utilization
  
• 2iz0.pdb. oxidoreductase 23-jul-06 2iz0 Cl
  Title: pex inhibitor-home data
  Author: r. sundaramoorthy, j. iulek, w. n. hunter
  Keywords: pentose shunt, oxidoreductase, 6-phosphogluconate dehydrogenase, gluconate utilization, pentose phosphate pathway
  
• 2iz1.pdb. oxidoreductase 23-jul-06 2iz1 Cl
  Title: 6pdh complexed with pex inhibitor synchrotron data
  Author: r. sundaramoorthy, j. iulek, w. n. hunter
  Keywords: pentose shunt, oxidoreductase, 6-phosphogluconate dehydrogenase, gluconate utilization
  
• 2izq.pdb. antibiotic 26-jul-06 2izq I K
  Title: gramicidin d complex with ki
  Author: a. olczak, m. l. glowka, m. szczesio, j. bojarska, w. l. duax, b. m. burkhart, z. wawrzak
  Keywords: high resolution study, double- stranded gramicidin dimer, anomalous signal, antibiotic
  
• 2j0g.pdb. lectin 03-aug-06 2j0g Ca
  Title: l-ficolin complexed to n-acetyl-mannosamine
  Author: v. garlatti, c. gaboriaud
  Keywords: innate immunity, fibrinogen-like domain, lectin, collagen, immunology, lectin-like, pattern- recognition-protein
  
• 2j0h.pdb. lectin 03-aug-06 2j0h Ca
  Title: l-ficolin complexed to acetyl-choline
  Author: v. garlatti, c. gaboriaud
  Keywords: ficrinogen-like, innate immunity, pattern recognition protein, lectin, collagen, immunology, lectin-like
  
• 2j0y.pdb. lectin 08-aug-06 2j0y Ca
  Title: l-ficolin complexed to b-1,3-d-glucan
  Author: v. garlatti, c. gaboriaud
  Keywords: ficrinogen-like, innate immunity, pattern recognition protein, lectin, collagen, immunology, lectin-like
  
• 2j1g.pdb. lectin 11-aug-06 2j1g Ca
  Title: l-ficolin complexed to n-acetyl-cystein
  Author: v. garlatti, c. gaboriaud
  Keywords: ficrinogen-like, innate immunity, pattern recognition protein, lectin, collagen, immunology, lectin-like
  
• 2j2p.pdb. lectin 17-aug-06 2j2p Ca
  Title: l-ficolin complexed to n-acetyl-cystein (150mm)
  Author: v. garlatti, c. gaboriaud
  Keywords: ficrinogen-like, innate immunity, pattern recognition protein, lectin, collagen, immunology, lectin-like
  
• 2j3f.pdb. lectin 21-aug-06 2j3f Ca
  Title: l-ficolin complexed to n-acetyl-d-galactosamine
  Author: v. garlatti, c. gaboriaud
  Keywords: collagen, immunology, glycoprotein
  
• 2j3g.pdb. lectin 21-aug-06 2j3g Ca
  Title: l-ficolin
  Author: v. garlatti, c. gaboriaud
  Keywords: innate immunity, fibrinogen-like domain, lectin, collagen, immunology, lectin-like, pattern- recognition-protein
  
• 2j3o.pdb. lectin 22-aug-06 2j3o Ca
  Title: l-ficolin complexed to n-acetyl-d-glucosamin
  Author: v. garlatti, c. gaboriaud
  Keywords: collagen, immunology, glycoprotein
  
• 2j3u.pdb. lectin 23-aug-06 2j3u Ca
  Title: l-ficolin complexed to galactose
  Author: v. garlatti, c. gaboriaud
  Keywords: collagen, immunology, glycoprotein
  
• 2j55.pdb. oxidoreductase 12-sep-06 2j55 Cu
  Title: x-ray reduced paraccocus denitrificans methylamine dehydrogenase o-quinone in complex with amicyanin.
  Author: a. r. pearson, r. pahl, v. davidson, c. m. wilmot
  Keywords: transport, periplasmic, metal-binding, oxidoreductase, electron transport, methylamine dehydrogenase single crystal microspectrophoto
  
• 2j56.pdb. oxidoreductase 12-sep-06 2j56 Cu Na
  Title: x-ray reduced paraccocus denitrificans methylamine dehydrogenase n-semiquinone in complex with amicyanin.
  Author: a. r. pearson, r. pahl, v. davidson, c. m. wilmot
  Keywords: transport, periplasmic, metal-binding, oxidoreductase, electron transport, methylamine dehydrogenase single crystal microspectrophoto
  
• 2j57.pdb. oxidoreductase 12-sep-06 2j57 Cu
  Title: x-ray reduced paraccocus denitrificans methylamine dehydrogenase n-quinol in complex with amicyanin.
  Author: a. r. pearson, r. pahl, v. davidson, c. m. wilmot
  Keywords: transport, periplasmic, metal-binding, oxidoreductase, electron transport, methylamine dehydrogenase single crystal microspectrophoto
  
• 2j5k.pdb. oxidoreductase 18-sep-06 2j5k Cl
  Title: 2.0 a resolution structure of the wild type malate dehydrogenase from haloarcula marismortui (radiation damage series)
  Author: e. fioravanti, f. m. d. vellieux, p. amara, d. madern, m. weik
  Keywords: halophile, oxidoreductase, radiation damage, malate dehydrogenase, tricarboxylic acid cycle
  
• 2j5q.pdb. oxidoreductase 19-sep-06 2j5q Cl
  Title: 2.15 a resolution structure of the wild type malate dehydrogenase from haloarcula marismortui after first radiation burn (radiation damage series)
  Author: e. fioravanti, f. m. d. vellieux, p. amara, d. madern, m. weik
  Keywords: halophile, oxidoreductase, radiation damage, malate dehydrogenase, tricarboxylic acid cycle
  
• 2j5r.pdb. oxidoreductase 19-sep-06 2j5r Cl
  Title: 2.25 a resolution structure of the wild type malate dehydrogenase from haloarcula marismortui after second radiation burn (radiation damage series)
  Author: e. fioravanti, f. m. d. vellieux, p. amara, d. madern, m. weik
  Keywords: halophile, oxidoreductase, radiation damage, malate dehydrogenase, tricarboxylic acid cycle
  
• 2j5z.pdb. lectin 21-sep-06 2j5z Ca
  Title: h-ficolin complexed to galactose
  Author: v. garlatti, c. gaboriaud
  Keywords: alternative splicing, lectin, collagen, immunology, glycoprotein
  
• 2j60.pdb. lectin 21-sep-06 2j60 Ca
  Title: h-ficolin complexed to d-fucose
  Author: v. garlatti, c. gaboriaud
  Keywords: alternative splicing, lectin, collagen, immunology, glycoprotein
  
• 2j61.pdb. lectin 21-sep-06 2j61 Ca
  Title: l-ficolin complexed to n-acetylglucosamine (forme c)
  Author: v. garlatti, c. gaboriaud
  Keywords: ficrinogen-like, innate immunity, pattern recognition protein, lectin, collagen, immunology, lectin-like
  
• 2j64.pdb. lectin 25-sep-06 2j64 Ca
  Title: h-ficolin
  Author: v. garlatti, c. gaboriaud
  Keywords: collagen, immunology, glycoprotein, immune system, hydroxylation, alternative splicing
  
• 2j8p.pdb. nuclear protein 27-oct-06 2j8p (NMR, 30 structures)
  Title: nmr structure of c-terminal domain of human cstf-64
  Author: x. qu, j. m. perez-canadillas, s. agrawal, j. de baecke, h. cheng, g. varani, c. moore
  Keywords: alternative splicing rna15, pcf11, cstf-64, rna-binding, nuclear protein, mrna processing, phosphorylation
  
• 2j8s.pdb. membrane protein/complex 27-oct-06 2j8s
  Title: drug export pathway of multidrug exporter acrb revealed by darpin inhibitors
  Author: g. sennhauser, p. amstutz, c. briand, o. storchenegger, m. g. gruetter
  Keywords: transport protein, antibiotic resistance/inhibitor complex, membrane protein/complex
  
• 2j96.pdb. photosynthesis 02-nov-06 2j96
  Title: the e-configuration of alfa-phycoerythrocyanin
  Author: m. schmidt, a. patel, y. zhao, w. reuter
  Keywords: z- to e-isomerization, transport, chromophore, bile pigment, phycobilisome, photosynthesis, light harvesting, phycobiliproteins
  
• 2j9r.pdb. transferase 15-nov-06 2j9r Zn
  Title: thymidine kinase from b. anthracis in complex with dt.
  Author: u. kosinska, c. carnrot, m. p. b. sandrini, a. r. clausen, l. wang, j. piskur, s. eriksson, h. eklund
  Keywords: dnk, lasso, kinase, transferase, atp-binding, deoxyribonucleoside kinase, dna synthesis, phosphate acceptor, nucleotide-binding
  
• 2j9u.pdb. protein transport 16-nov-06 2j9u Zn
  Title: 2 angstrom x-ray structure of the yeast escrt-i vps28 c- terminus in complex with the nzf-n domain from escrt-ii
  Author: d. j. gill, h. l. teo, j. sun, o. perisic, d. b. veprintsev, s. d. emr, r. l. williams
  Keywords: mvb, zinc, chmp, escrt, vps36, vps28, membrane, transport, nzf finger, hiv budding, zinc-finger, metal-binding, protein transport
  
• 2j9v.pdb. protein transport 16-nov-06 2j9v
  Title: 2 angstrom x-ray structure of the yeast escrt-i vps28 c- terminus
  Author: d. j. gill, h. l. teo, j. sun, o. perisic, d. b. veprintsev, s. d. emr, r. l. williams
  Keywords: hiv budding, protein transport, vps, mvb, chmp, escrt, vps36, vps28, transport
  
• 2j9w.pdb. protein transport 16-nov-06 2j9w
  Title: structural insight into the escrt-i-ii link and its role in mvb trafficking
  Author: d. j. gill, h. l. teo, j. sun, o. perisic, d. b. veprintsev, s. d. emr, r. l. williams
  Keywords: vps, chmp, vps36, vps28, escrt, nzf finger, hiv budding, protein transport
  
• 2ja1.pdb. transferase 17-nov-06 2ja1 Zn
  Title: thymidine kinase from b. cereus with ttp bound as phosphate donor.
  Author: u. kosinska, c. carnrot, m. p. b. sandrini, a. r. clausen, l. wang, j. piskur, s. eriksson, h. eklund
  Keywords: dnk, lasso, kinase, transferase, phosphate donor, deoxyribonucleoside kinase
  
• 2jbh.pdb. transferase 07-dec-06 2jbh Ca As
  Title: human phosphoribosyl transferase domain containing 1
  Author: m. welin, p. stenmark, c. arrowsmith, h. berglund, r. busam, r. collins, a. edwards, h. eklund, u. b. ericsson, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg schiavone, m. hogbom, i. johansson, t. karlberg, t. kotenyova, m. moche, m. e. nilsson, t. nyman, d. ogg, c. persson, j. sagemark, m. sundstrom, j. uppenberg, a. g. thorsell, s. van den berg, j. weigelt, p. nordlund
  Keywords: prtfdc1, transferase, purine salvage
  
• 2jbr.pdb. oxidoreductase 11-dec-06 2jbr
  Title: structure of the monooxygenase component of p- hydroxyphenylacetate hydroxylase from acinetobacter baumanni
  Author: a. alfieri, a. mattevi
  Keywords: oxidoreductase
  
• 2jbs.pdb. oxidoreductase 11-dec-06 2jbs
  Title: structure of the monooxygenase component of p- hydroxyphenylacetate hydroxylase from acinetobacter baumannii
  Author: a. alfieri, a. mattevi
  Keywords: oxidoreductase
  
• 2jbt.pdb. oxidoreductase 11-dec-06 2jbt
  Title: structure of the monooxygenase component of p- hydroxyphenylacetate hydroxylase from acinetobacter baumannii
  Author: a. alfieri, a. mattevi
  Keywords: hydroxylase, oxidoreductase
  
• 2jbz.pdb. transferase 15-dec-06 2jbz Mg K
  Title: crystal structure of the streptomyces coelicolor holo- [acyl-carrier-protein] synthase (acps) in complex with coenzyme a at 1.6 a
  Author: p. dall'aglio, c. arthur, c. k. e. law, m. p. crump, j. crosby, a. t. hadfield
  Keywords: magnesium, coenzyme a, transferase, poliketides, metal-binding, lipid synthesis, phosphopantetheine arm, fatty acid biosynthesis, acyl carrier protein synthase
  
• 2jc3.pdb. transferase 19-dec-06 2jc3
  Title: structure of o-acetylserine sulfhydrylase b from salmonella typhimurium
  Author: a. chattopadhyay, w. m. rabeh, f. speroni, m. meier, s. ivaninskii, a. mozzarelli, p. burkhard, p. f. cook
  Keywords: sulfhydrylase, pyridoxal phosphate, vitamin b6 dependent enzyme, cysteine biosynthesis, amino-acid biosynthesis
  
• 2je6.pdb. hydrolase 15-jan-07 2je6 Cl
  Title: structure of a 9-subunit archaeal exosome
  Author: e. lorentzen, e. conti
  Keywords: hydrolase, rna-binding, exonuclease, phosphorolytic, exoribonuclease, rna degradation, rna, rrp4, rrp42, rrp41, exosome, archaeal, rnase ph
  
• 2jn4.pdb. structural genomics, unknown function 22-dec-06 2jn4 (NMR, 20 structures)
  Title: solution structure of a hypothetical protein rp4601 from rhodopseudomonas palustris (nesg target rpt2 / ocsp target rp4601)
  Author: a. lemak, s. srisailam, a. yee, m. d. karra, j. a. lukin, c. h. arrowsmith, northeast structural genomics consortium (nesg)
  Keywords: rhodopseudomonas palustris, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2nmm.pdb. hydrolase 22-oct-06 2nmm Se
  Title: crystal structure of human phosphohistidine phosphatase. northeast structural genomics consortium target hr1409
  Author: a. p. kuzin, m. abashidze, f. forouhar, j. seetharaman, c. kent, y. fang, k. cunningham, k. conover, l. c. ma, r. xiao, t. acton, g. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
  
• 2noo.pdb. hydrolase 26-oct-06 2noo I Ni
  Title: crystal structure of mutant nika
  Author: c. addy, m. ohara, f. kawai, a. kidera, m. ikeguchi, s. fuchigami, m. osawa, i. shimada, s. y. park, j. r. h. tame, j. g. heddle
  Keywords: transport, iodine, periplasm
  
• 2noq.pdb. ribosome 26-oct-06 2noq (cryo-electron microscopy)
  Title: structure of ribosome-bound cricket paralysis virus ires rna
  Author: m. schuler, s. r. connell, a. lescoute, j. giesebrecht, m. dabrowski, b. schroeer, t. mielke, p. a. penczek, e. westhof, c. m. t. spahn
  Keywords: ribosome, translation, internal initiation
  
• 2nox.pdb. oxidoreductase 26-oct-06 2nox Fe
  Title: crystal structure of tryptophan 2,3-dioxygenase from ralstonia metallidurans
  Author: y. zhang, s. a. kang, t. mukherjee, s. bale, b. r. crane, t. p. begley, s. e. ealick
  Keywords: heme protein
  
• 2nps.pdb. transport protein 30-oct-06 2nps
  Title: crystal structure of the early endosomal snare complex
  Author: d. zwilling, a. cypionka, w. h. pohl, d. fasshauer, p. j. walla, m. c. wahl, r. jahn
  Keywords: snare complex, early endosomal snare complex, syntaxin 6, syntaxin 13, vti1a, vamp4
  
• 2ns2.pdb. cell cycle 02-nov-06 2ns2
  Title: crystal structure of spindlin1
  Author: q. zhao, l. qin, f. jiang, b. wu, w. yue, f. xu, z. rong, h. yuan, x. xie, y. gao, c. bai, m. bartlam
  Keywords: repeat domains
  
• 2ntu.pdb. proton transport 08-nov-06 2ntu
  Title: bacteriorhodopsin, wild type, before illumination
  Author: j. k. lanyi, b. schobert
  Keywords: membrane protein, retinal protein, lipids, photoreceptor, haloarchaea, 7-transmembrane, serpentine, ion transport
  
• 2ntw.pdb. proton transport 08-nov-06 2ntw
  Title: bacteriorhodopsin, wild type, after illumination to produce the l intermediate
  Author: j. k. lanyi, b. schobert
  Keywords: membrane protein, retinal protein, lipids, photoreceptor, haloarchaea, 7-transmembrane, serpentine, ion transport,photointermediate
  
• 2ntx.pdb. signaling protein 08-nov-06 2ntx Se
  Title: prone8
  Author: c. thomas, i. fricke, a. scrima, a. berken, a. wittinghofer
  Keywords: guanine nucleotide exchange factor
  
• 2nty.pdb. signaling protein 08-nov-06 2nty
  Title: rop4-gdp-prone8
  Author: c. thomas, i. fricke, a. scrima, a. berken, a. wittinghofer
  
  
• 2nuu.pdb. transport protein/signaling protein 09-nov-06 2nuu
  Title: regulating the escherichia coli ammonia channel: the crystal structure of the amtb-glnk complex
  Author: m. j. conroy, a. durand, d. lupo, x. -d. li, p. a. bullough, f. k. winkler, m. merrick
  Keywords: nitrogen regulation, ammonia transport
  
• 2nw4.pdb. hormone/growth factor 14-nov-06 2nw4 Cl
  Title: crystal structure of the rat androgen receptor ligand binding domain complex with bms-564929
  Author: j. ostrowski, j. e. kuhns, j. a. lupisella, m. c. manfredi, b. c. beehler, s. r. krystek, y. bi, c. sun, r. seethala, r. golla, p. g. sleph, a. fura, y. an, k. f. kish, j. s. sack, k. a. mookhtiar, g. j. grover, l. g. hamann
  Keywords: steroid receptor, nuclear receptor, transcription regulation, ligand-binding domain
  
• 2nyt.pdb. hydrolase 21-nov-06 2nyt Zn
  Title: the apobec2 crystal structure and functional implications for aid
  Author: c. prochnow, r. bransteitter, m. klein, m. goodman, x. chen
  Keywords: zinc-ion binding
  
• 2nyy.pdb. toxin/immune system 21-nov-06 2nyy Zn Ca
  Title: crystal structure of botulinum neurotoxin type a complexed with monoclonal antibody cr1
  Author: r. c. stevens, j. w. arndt
  Keywords: neurotoxin, fab, protein antibody complex
  
• 2nz9.pdb. toxin/immune system 22-nov-06 2nz9 Zn Ca
  Title: crystal structure of botulinum neurotoxin type a complexed with monoclonal antibody ar2
  Author: r. c. stevens, j. w. arndt
  Keywords: neurotoxin, fab, protein antibody complex
  
• 2nzw.pdb. transferase 27-nov-06 2nzw
  Title: crystal structure of alpha1,3-fucosyltransferase
  Author: h. y. sun, t. p. ko
  Keywords: 3-fucosyltransferase, fucosyltransferase, fuct, gt 10
  
• 2nzx.pdb. transferase 27-nov-06 2nzx
  Title: crystal structure of alpha1,3-fucosyltransferase with gdp
  Author: h. y. sun, t. p. ko
  Keywords: 3-fucosyltransferase, fucosyltransferase, fuct, gt 10
  
• 2nzy.pdb. transferase 27-nov-06 2nzy
  Title: crystal structure of alpha1,3-fucosyltransferase with gdp- fucose
  Author: h. y. sun, t. p. ko
  Keywords: 3-fucosyltransferase, fucosyltransferase, fuct, gt 10
  
• 2o1i.pdb. deoxyribonucleic acid 28-nov-06 2o1i Rh
  Title: rh(bpy)2chrysi complexed to mismatched dna
  Author: v. c. pierre, j. t. kaiser, j. k. barton
  Keywords: metallointercalator, dna recognition
  
• 2o1p.pdb. transferase 29-nov-06 2o1p
  Title: structure of yeast poly(a) polymerase in a somewhat closed state
  Author: a. bohm, p. balbo, j. toth
  
  
• 2o1q.pdb. structural genomics, unknown function 29-nov-06 2o1q Cl Zn Se
  Title: crystal structure of putative acetyl/propionyl-coa carboxylase, alpha subunit (zp_00243239.1) from rubrivivax gelatinosus pm1 (methylobium petroleophilum pm1) at 1.50 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: putative acetyl/propionyl-coa carboxylase, alpha subunit, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2o36.pdb. hydrolase 30-nov-06 2o36 Zn
  Title: crystal structure of engineered thimet oligopeptidase with neurolysin specificity in neurotensin cleavage site
  Author: d. w. rodgers, e. j. lim
  Keywords: substrate-binding channel
  
• 2o3e.pdb. hydrolase 01-dec-06 2o3e Zn
  Title: crystal structure of engineered neurolysin with thimet oligopeptidase specificity for neurotensin cleavage site.
  Author: d. w. rodgers, e. j. lim
  Keywords: substrate-binding channel
  
• 2o4v.pdb. membrane protein 05-dec-06 2o4v Cl Ca
  Title: an arginine ladder in oprp mediates phosphate specific transfer across the outer membrane
  Author: t. f. moraes, m. bains, r. e. hancock, n. c. strynadka
  Keywords: porin, phosphate, transport, channel
  
• 2o7u.pdb. metal transport 11-dec-06 2o7u Fe
  Title: crystal structure of k206e/k296e mutant of the n-terminal half molecule of human transferrin
  Author: h. m. baker, d. nurizzo, a. b. mason, e. n. baker
  Keywords: iron binding protein, dilysine pair
  
• 2o84.pdb. metal transport 12-dec-06 2o84 K Fe
  Title: crystal structure of k206e mutant of n-lobe human transferrin
  Author: h. m. baker, d. nurizzo, a. b. mason, e. n. baker
  Keywords: iron binding and release, dilysine pair
  
• 2oac.pdb. transferase 15-dec-06 2oac
  Title: mouse c14a glutathione-s-transferase mutant in complex with s-(p-nitrobenzyl) glutathione
  Author: o. j. kyrieleis, g. mcmanus, t. j. mantle, a. r. khan
  
  
• 2oad.pdb. transferase 15-dec-06 2oad
  Title: structure of glutathione-s-transferase c169a mutant
  Author: o. j. kyrieleis, g. mcmanus, t. j. mantle, a. r. khan
  
  
• 2oas.pdb. transferase 17-dec-06 2oas Se
  Title: crystal structure of 4-hydroxybutyrate coenzyme a transferase (atoa) in complex with coa from shewanella oneidensis, northeast structural genomics target sor119.
  Author: f. forouhar, h. neely, m. hussain, j. benach, j. seetharaman, k. cunningham, l. c. ma, l. owen, y. fang, r. xiao, j. liu, t. b. acton, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2ob7.pdb. rna binding protein/rna 18-dec-06 2ob7 (cryo-electron microscopy)
  Title: structure of tmrna-(smpb)2 complex as inferred from cryo-em
  Author: j. frank, b. felden, r. gillet, w. li
  Keywords: smpb
  
• 2obd.pdb. lipid transport 18-dec-06 2obd Cl
  Title: crystal structure of cholesteryl ester transfer protein
  Author: x. qiu
  Keywords: lipid transfer protein
  
• 2och.pdb. chaperone 20-dec-06 2och
  Title: j-domain of dnj-12 from caenorhabditis elegans
  Author: j. osipiuk, n. maltseva, m. gu, c. voisine, r. i. morimoto, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: j-domain, chaperone, apc90013.2, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2ocz.pdb. lyase 21-dec-06 2ocz Mg Se
  Title: the structure of a putative 3-dehydroquinate dehydratase from streptococcus pyogenes.
  Author: m. e. cuff, e. duggan, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: type i 3-dehydroquinate dehydratase, dhqase, streptococcus pyogenes, dehydroshikimate, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2od0.pdb. structural genomics, unknown function 21-dec-06 2od0 Mg Se
  Title: the crystal structure of gene product vp1028 from vibrio parahaemolyticus
  Author: r. zhang, m. zhou, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: vibrio parahaemolyticus, unknown function, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2od4.pdb. structural genomics, unknown function 21-dec-06 2od4 Cl Se
  Title: crystal structure of hypothetical protein (jcvi_pep_1096665735785) from an environmental metagenome (unidentified marine microbe), sorcerer ii global ocean sampling experiment at 1.70 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: metagenomics, hypothetical protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2od5.pdb. structural genomics, unknown function 21-dec-06 2od5 Cl Se
  Title: crystal structure of hypothetical protein (jcvi_pep_1096688149193) from an environmental metagenome (unidentified marine microbe), sorcerer ii global ocean sampling experiment at 1.79 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: metagenomics, hypothetical protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2od6.pdb. structural genomics, unknown function 21-dec-06 2od6 Se
  Title: crystal structure of hypothetical protein (jcvi_pep_1096682647733) from an environmental metagenome (unidentified marine microbe), sorcerer ii global ocean sampling experiment at 1.85 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: metagenomics, hypothetical protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2odf.pdb. structural genomics, unknown function 22-dec-06 2odf
  Title: the crystal structure of gene product atu2144 from agrobacterium tumefaciens
  Author: r. zhang, x. xu, h. zheng, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: agrobacterium tumefaciens, unknown function, psi-2, mcsg, protein structure initiative, midwest center for structural genomics
  
• 2odk.pdb. structural genomics, unknown function 22-dec-06 2odk Se
  Title: putative prevent-host-death protein from nitrosomonas europaea
  Author: j. osipiuk, t. skarina, o. kagan, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, apc7367, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2ofq.pdb. protein transport/protein transport 04-jan-07 2ofq (NMR, 20 structures)
  Title: nmr solution structure of a complex between the virb9/virb7 interaction domains of the pkm101 type iv secretion system
  Author: r. harris, r. bayliss, p. c. driscoll, g. waksman
  Keywords: tran, pkm101
  
• 2ofy.pdb. transcription 04-jan-07 2ofy Se
  Title: crystal structure of putative xre-family transcriptional regulator from rhodococcus sp.
  Author: i. a. shumilin, o. onopriyenko, v. yim, m. chruszcz, m. cymborowski, a. savchenko, a. edwards, a. joachimiak, w. minor, midwest center for structural genomics (mcsg)
  Keywords: xre-family, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2ogy.pdb. transferase 09-jan-07 2ogy Ca
  Title: asn199ala mutant of the 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase complexed with methyltetrahydrofolate to 2.3 angstrom resolution
  Author: t. i. doukov, c. l. drennan, h. hemmi, s. w. ragsdale
  Keywords: corrionoid, vitamin b12, tim barrel
  
• 2oh3.pdb. metal binding protein 09-jan-07 2oh3 Zn Se
  Title: crystal structure of cog1633: uncharacterized conserved protein (zp_00055496.1) from magnetospirillum magnetotacticum ms-1 at 2.00 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: zp_00055496.1, cog1633: uncharacterized conserved protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2oh8.pdb. oxygen storage/transport 09-jan-07 2oh8 Fe
  Title: myoglobin cavity mutant i28w
  Author: g. n. phillips jr. , j. soman, j. s. olson
  Keywords: ligand entry and exit pathways
  
• 2oh9.pdb. oxygen storage/transport 09-jan-07 2oh9 Fe
  Title: myoglobin cavity mutant v68w
  Author: g. n. phillips jr. , t. li, e. a. brucker, j. soman, j. s. olson
  Keywords: ligand entry and exit pathways
  
• 2oha.pdb. oxygen storage/transport 09-jan-07 2oha Fe
  Title: myoglobin cavity mutant f138w
  Author: g. n. phillips jr. , j. soman, j. s. olson
  Keywords: ligand entry and exit pathways
  
• 2ohb.pdb. oxygen storage/transport 09-jan-07 2ohb Fe
  Title: myoglobin cavity mutant i107w
  Author: g. n. phillips jr. , r. l. schweers, j. soman, j. s. olson
  Keywords: ligand entry and exit pathways
  
• 2ohw.pdb. structural genomics, unknown function 10-jan-07 2ohw
  Title: crystal structure of the yuei protein from bacillus subtilis
  Author: j. b. bonanno, x. jin, h. mu, m. dickey, k. t. bain, b. wu, t. chen, c. reyes, s. wasserman, d. smith, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2oil.pdb. protein transport 11-jan-07 2oil Mg U
  Title: crystal structure of human rab25 in complex with gdp
  Author: h. zhu, j. wang, y. shen, w. tempel, r. landry, c. h. arrowsmith, a. m. edwards, m. sundstrom, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: rab, gdp, structural genomics, structural genomics consortium, sgc
  
• 2oje.pdb. immune system 12-jan-07 2oje Se
  Title: mycoplasma arthritidis-derived mitogen complexed with class ii mhc molecule hla-dr1/ha complex in the presence of edta
  Author: h. m. li, y. w. zhao, y. guo, z. li, e eisele, w mourad
  Keywords: mhc
  
• 2ojl.pdb. structural genomics, unknown function 12-jan-07 2ojl Se
  Title: crystal structure of q7waf1_borpa from bordetella parapertussis. northeast structural genomics target bpr68.
  Author: j. benach, h. neely, j. seetharaman, h. wang, y. fang, k. cunningham, l. c. ma, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: nesg, q7waf1, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
  
• 2oka.pdb. structural genomics, unknown function 16-jan-07 2oka
  Title: crystal structure of q9hyq7_pseae from pseudomonas aeruginosa. northeast structural genomics consortium target par82
  Author: j. benach, h. neely, j. seetharaman, x. c. chen, y. fang, k. cunningham, l. owens, l. c. ma, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: nesg, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium