Recent PDB releases or updates: week of 24 November 2006

• 1sgm.pdb. transcription 24-feb-04 1sgm
  Title: crystal structure of hypothetical protein yxaf
  Author: j. seetharaman, s. swaminathan, new york structural genomics research consortium (nysgrc)
  Keywords: structural genomics, psi, protein structure initiative, new york structural genomics research consortium, nysgrc
  
• 1vs5.pdb. ribosome 04-aug-06 1vs5 Mg
  Title: crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5a resolution. this file contains the 30s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
  Author: b. s. schuwirth, a. vila-sanjurjo, j. h. d. cate
  Keywords: kasugamycin
  
• 1vs6.pdb. ribosome 04-aug-06 1vs6 Mg
  Title: crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5a resolution. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
  Author: b. s. schuwirth, a. vila-sanjurjo, j. h. d. cate
  Keywords: kasugamycin
  
• 1vs7.pdb. ribosome 04-aug-06 1vs7 Mg
  Title: crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5a resolution. this file contains the 30s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
  Author: b. s. schuwirth, a. vila-sanjurjo, j. h. d. cate
  Keywords: kasugamycin
  
• 1vs8.pdb. ribosome 04-aug-06 1vs8 Mg
  Title: crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5a resolution. this file contains the 30s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
  Author: b. s. schuwirth, a. vila-sanjurjo, j. h. d. cate
  Keywords: kasugamycin
  
• 1xeu.pdb. cell invasion 13-sep-04 1xeu
  Title: crystal structure of internalin c from listeria monocytogenes
  Author: a. ooi, s. hussain, a. seyedarabi, r. w. pickersgill
  
  
• 1xl9.pdb. lyase 30-sep-04 1xl9
  Title: crystal structure of dihydrodipicolinate synthase dapa-2 (ba3935) from bacillus anthracis.
  Author: e. blagova, v. levdikov, n. milioti, m. j. fogg, a. k. kalliomaa, j. a. brannigan, k. s. wilson, a. j. wilkinson
  
  
• 1z77.pdb. transcription 24-mar-05 1z77 Se
  Title: crystal structure of transcriptional regulator protein from thermotoga maritima.
  Author: k. d. koclega, m. chruszcz, m. d. zimmerman, m. cymborowski, m. kudritska, w. minor, midwest center for structural genomics (mcsg)
  Keywords: tetr family, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg
  
• 1zj7.pdb. hydrolase/hydrolase inhibitor 28-apr-05 1zj7
  Title: crystal structure of a complex of mutant hiv-1 protease (a71v, v82t, i84v) with a hydroxyethylamine peptidomimetic inhibitor boc-phe-psi[s-ch(oh)ch2nh]-phe-glu-phe-nh2
  Author: t. skalova, j. dohnalek, j. duskova, h. petrokova, j. hasek
  
  
• 1zlf.pdb. hydrolase/hydrolase inhibitor 06-may-05 1zlf
  Title: crystal structure of a complex of mutant hiv-1 protease (a71v, v82t, i84v) with a hydroxyethylamine peptidomimetic inhibitor
  Author: t. skalova, j. dohnalek, j. duskova, h. petrokova, j. hasek
  
  
• 1zts.pdb. structural genomics, unknown function 27-may-05 1zts (NMR, 20 structures)
  Title: solution structure of bacillus subtilis protein yqbg: northeast structural genomics consortium target sr215
  Author: g. liu, y. shen, r. xiao, t. acton, l. ma, a. joachimiak, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
  Keywords: gft nmr, structural genomics, protein structure initiative, psi, nesg, sr215, northeast structural genomics consortium, cyana2.0
  
• 1zxy.pdb. transferase 09-jun-05 1zxy Mg
  Title: anthranilate phosphoribosyltransferase from sulfolobus solfataricus in complex with prpp and magnesium
  Author: m. marino, m. deuss, r. sterner, o. mayans
  Keywords: trpd, prpp
  
• 1zyk.pdb. transferase 10-jun-05 1zyk Mg
  Title: anthranilate phosphoribosyltransferase in complex with prpp, anthranilate and magnesium
  Author: m. marino, m. deuss, r. sterner, o. mayans
  Keywords: prpp, anthranilate, trpd
  
• 2a83.pdb. immune system 07-jul-05 2a83 Na
  Title: crystal structure of hla-b*2705 complexed with the glucagon receptor (gr) peptide (residues 412-420)
  Author: c. ruckert, m. t. fiorillo, b. loll, r. moretti, j. biesiadka, w. saenger, a. ziegler, r. sorrentino, b. uchanska-ziegler
  Keywords: mhc (major histocompatibility complex),hla- b*2705
  
• 2af5.pdb. de novo protein, immune system 25-jul-05 2af5
  Title: 2.5a x-ray structure of engineered ospa protein
  Author: k. makabe, d. mcelheny, v. tereshko, a. hilyard, a. koide, s. koide
  Keywords: beta-hairpin, repeat protein
  
• 2aic.pdb. cell invasion 29-jul-05 2aic (NMR, 20 structures)
  Title: nmr structure of the catalytic domain of guanine nucleotide exchange factor bope from burkholderia pseudomallei
  Author: h. l. wu, a. upadhyay, c. williams, e. e. galyov, j. m. h. elsen, s. bagby
  
  
• 2amz.pdb. plant protein 10-aug-05 2amz
  Title: agglutinin from abrus precatorius (apa i)
  Author: a. bagaria, k. surendranath, u. a. ramagopal, a. a. karande, s. ramakumar
  Keywords: immunotoxin, agglutinin abrin
  
• 2aql.pdb. dna binding protein 18-aug-05 2aql
  Title: crystal structure of the mrg15 mrg domain
  Author: f. a. quiocho, b. r. bowman
  Keywords: mrg domain, core binding domain, recombinase, dna binding, chromatin remodeling
  
• 2b0w.pdb. transferase, hydrolase 14-sep-05 2b0w K
  Title: crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase
  Author: l. xu, y. chong, i. hwang, a. d'onofrio, k. amore, g. p. beardsley, c. li, a. j. olson, d. l. boger, i. a. wilson
  Keywords: impch, structure-base, transition state analogue, inhibitor
  
• 2b1g.pdb. transferase, hydrolase 15-sep-05 2b1g K
  Title: crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase
  Author: l. xu, y. chong, i. hwang, a. d'onofrio, k. amore, g. p. beardsley, c. li, a. j. olson, d. l. boger, i. a. wilson
  Keywords: impch, structure-base, transition state analogue, inhibitor
  
• 2b1i.pdb. transferase, hydrolase 15-sep-05 2b1i K
  Title: crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase
  Author: l. xu, y. chong, i. hwang, a. d'onofrio, k. amore, g. p. beardsley, c. li, a. j. olson, d. l. boger, i. a. wilson
  Keywords: impch, structure-base, transition state analogue, inhibitor
  
• 2bs2.pdb. oxidoreductase 09-may-05 2bs2 Na Fe
  Title: quinol:fumarate reductase from wolinella succinogenes
  Author: c. r. d. lancaster
  Keywords: respiratory chain, succinate dehydrogenase, transmembrane, tricarboxylic acid cycle
  
• 2bx5.pdb. antibody 22-jul-05 2bx5
  Title: is fr1 the antibody's achillies heel
  Author: l. c. james
  Keywords: lcdd, light-chain, antibody, aggregation, fr1
  
• 2c0l.pdb. transport protein/receptor complex 05-sep-05 2c0l
  Title: tpr domain of human pex5p in complex with human mscp2
  Author: w. a. stanley, p. kursula, m. wilmanns
  Keywords: transit peptide, transport protein/receptor complex
  
• 2c0m.pdb. transport protein 05-sep-05 2c0m
  Title: apo form of the tpr domain of the pex5p receptor
  Author: w. a. stanley, p. kursula, m. wilmanns
  Keywords: transport, import receptor complex, peroxisome, disease mutation, protein transport, zellweger syndrome, transport protein
  
• 2cf4.pdb. hydrolase 15-feb-06 2cf4 Co Se
  Title: pyrococcus horikoshii tet1 peptidase can assemble into a tetrahedron or a large octahedral shell
  Author: f. m. d. vellieux, g. schoehn, m. a. dura, a. roussel, b. franzetti
  Keywords: metalloprotein, hyperthermophile, archaea, tetrahedral, hydrolase
  
• 2cgi.pdb. hydrolase 07-mar-06 2cgi Cl
  Title: siras structure of tetragonal lysosyme using derivative data collected at the high energy remote holmium kedge
  Author: j. jakoncic, m. di michiel, z. zhong, v. honkimaki, y. jouanneau, v. stojanoff
  Keywords: phasing, mad, sad, siras, radiation damage, absorption, holmium, hydrolase, glycosidase, allergen, antimicrobial, bacteriolytic enzyme
  
• 2cw2.pdb. oxidoreductase 16-jun-05 2cw2 Fe
  Title: crystal structure of superoxide dismutase from p. marinus
  Author: o. a. asojo, e. j. schott, g. r. vasta, a. m. silva
  
  
• 2cw3.pdb. oxidoreductase 16-jun-05 2cw3 Fe
  Title: x-ray structure of pmsod2, superoxide dismutase from perkinsus marinus
  Author: o. a. asojo, e. j. schott, g. r. vasta, a. m. silva
  
  
• 2d4m.pdb. hydrolase 20-oct-05 2d4m
  Title: crystal structure of apo m-pmv dutpase
  Author: v. nemeth, o. barabas, g. b. vertessy
  
  
• 2d4n.pdb. hydrolase 20-oct-05 2d4n Mg
  Title: crystal structure of m-pmv dutpase complexed with dupnpp, substrate analogue
  Author: v. nemeth, o. barabas, g. b. vertessy
  
  
• 2d5m.pdb. electron transport 02-nov-05 2d5m Zn
  Title: flavoredoxin of desulfovibrio vulgaris (miyazaki f)
  Author: y. ueda, n. shibata, y. higuchi
  Keywords: fmn binding
  
• 2d5u.pdb. hydrolase 06-nov-05 2d5u (NMR, 10 structures)
  Title: solution structure of the n-terminal portion of the pub domain of mouse peptide:n-glycanase
  Author: h. sasakawa, t. hirao, y. yamaguchi, t. suzuki, k. kato
  
  
• 2d7j.pdb. ligase 21-nov-05 2d7j
  Title: crystal structure analysis of glutamine amidotransferase from pyrococcus horikoshii ot3
  Author: s. maruoka, w. c. lee, m. kamo, n. kudo, k. nagata, m. tanokura
  
  
• 2dfy.pdb. transcription 06-mar-06 2dfy Zn
  Title: crystal structure of a cyclized protein fusion of lmo4 lim domains 1 and 2 with the lim interacting domain of ldb1
  Author: c. m. j. jeffries, s. c. graham, c. a. collyer, j. m. guss, j. m. matthews
  Keywords: lim only protein, lim domain, circular protein
  
• 2dio.pdb. isomerase 30-mar-06 2dio Se
  Title: crystal structure of the allene oxide cyclase 2 with bound inhibitor vernolic acid
  Author: e. hofmann, f. schaller, p. zerbe
  Keywords: inhibitor complex
  
• 2dkh.pdb. oxidoreductase 11-apr-06 2dkh
  Title: crystal structure of 3-hydroxybenzoate hydroxylase from comamonas testosteroni, in complex with the substrate
  Author: t. hiromoto, s. fujiwara, k. hosokawa, h. yamaguchi
  Keywords: flavoprotein, monooxygenase, substrate complex
  
• 2dki.pdb. oxidoreductase 11-apr-06 2dki Xe
  Title: crystal structure of 3-hydroxybenzoate hydroxylase from comamonas testosteroni, under pressure of xenon gas (12 atm)
  Author: t. hiromoto, s. fujiwara, k. hosokawa, h. yamaguchi
  Keywords: flavoprotein, monooxygenase, xenon derivative
  
• 2du8.pdb. oxidoreductase 20-jul-06 2du8
  Title: crystal structure of human d-amino acid oxidase
  Author: t. kawazoe, h. tsuge, k. fukui
  Keywords: conformational variability
  
• 2ewf.pdb. hydrolase 03-nov-05 2ewf Br
  Title: crystal structure of the site-specific dna nickase n.bspd6i
  Author: g. s. kachalova, h. d. bartunik, r. i. artyukh, e. a. rogulin, t. a. perevyazova, l. a. zheleznaya, n. i. matvienko
  Keywords: beta-alpha-barrel
  
• 2ewv.pdb. protein transport 07-nov-05 2ewv
  Title: crystal structure of the pilus retraction motor pilt and bound adp
  Author: k. a. satyshur, k. t. forest
  Keywords: atpase, hexameric pilt
  
• 2eww.pdb. protein transport 07-nov-05 2eww Se
  Title: crystal structure of the pilus retraction motor pilt and bound atp
  Author: k. a. satyshur, k. t. forest
  Keywords: atpase, hexameric pilt
  
• 2exx.pdb. unknown function 09-nov-05 2exx
  Title: crystal structure of hscarg from homo sapiens in complex with nadp
  Author: x. dai, q. chen, d. yao, y. liang, y. dong, x. gu, x. zheng, m. luo
  
  
• 2eyu.pdb. protein transport 09-nov-05 2eyu Se
  Title: the crystal structure of the c-terminal domain of aquifex aeolicus pilt
  Author: k. a. satyshur, g. a. worzalla, l. s. meyer, e. k. heiniger, k. g. aukema, k. t. forest
  
  
• 2f07.pdb. transcription 12-nov-05 2f07
  Title: crystal structure of yvdt from bacillus subtilis
  Author: x. -d. su, y. -m. yu, j. nan
  
  
• 2f0z.pdb. hydrolase 14-nov-05 2f0z
  Title: crystal structure of the human sialidase neu2 in complex with zanamivir inhibitor
  Author: l. m. g. chavas, r. kato, j. mckimm-breschkin, p. m. colman, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, influenza virus, zanamivir
  
• 2f10.pdb. hydrolase 14-nov-05 2f10
  Title: crystal structure of the human sialidase neu2 in complex with peramivir inhibitor
  Author: l. m. g. chavas, r. kato, j. mckimm-breschkin, p. m. colman, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, influenza virus, peramivir
  
• 2f11.pdb. hydrolase 14-nov-05 2f11
  Title: crystal structure of the human sialidase neu2 in complex with isobutyl ether mimetic inhibitor
  Author: l. m. g. chavas, r. kato, m. c. mann, r. j. thomson, j. c. dyason, m. von itzstein, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, influenza virus, drug design
  
• 2f12.pdb. hydrolase 14-nov-05 2f12
  Title: crystal structure of the human sialidase neu2 in complex with 3- hydroxypropyl ether mimetic inhibitor
  Author: l. m. g. chavas, r. kato, m. c. mann, r. j. thomson, j. c. dyason, m. von itzstein, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, influenza virus, drug design
  
• 2f13.pdb. hydrolase 14-nov-05 2f13
  Title: crystal structure of the human sialidase neu2 in complex with 2',3'- dihydroxypropyl ether mimetic inhibitor
  Author: l. m. g. chavas, r. kato, m. c. mann, r. j. thomson, j. c. dyason, m. von itzstein, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, influenza virus, drug design
  
• 2f1h.pdb. recombination 14-nov-05 2f1h Mg K
  Title: recombinase in complex with amp-pnp and potassium
  Author: x. qian, y. he, y. wu, y. luo
  Keywords: protein-atp complex, rad51, reca, recombinase
  
• 2f1i.pdb. recombination 14-nov-05 2f1i Mg
  Title: recombinase in complex with amp-pnp
  Author: x. qian, y. he, y. wu, y. luo
  Keywords: protein-atp complex, rad51, reca, recombinase
  
• 2f1j.pdb. recombination 14-nov-05 2f1j Mg
  Title: recombinase in complex with adp
  Author: x. qian, y. he, y. wu, y. luo
  Keywords: protein-atp complex, rad51, reca, recombinase
  
• 2f24.pdb. hydrolase 15-nov-05 2f24 Cl
  Title: crystal structure of the human sialidase neu2 e111q mutant
  Author: l. m. g. chavas, r. kato, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, ganglioside, drug design
  
• 2f25.pdb. hydrolase 15-nov-05 2f25
  Title: crystal structure of the human sialidase neu2 e111q mutant in complex with dana inhibitor
  Author: l. m. g. chavas, r. kato, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, ganglioside, drug design
  
• 2f26.pdb. hydrolase 15-nov-05 2f26 Cl
  Title: crystal structure of the human sialidase neu2 e111q-q112e double mutant
  Author: l. m. g. chavas, r. kato, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, ganglioside, drug design
  
• 2f27.pdb. hydrolase 15-nov-05 2f27
  Title: crystal structure of the human sialidase neu2 e111q-q112e double mutant in complex with dana inhibitor
  Author: l. m. g. chavas, r. kato, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, ganglioside, drug design
  
• 2f28.pdb. hydrolase 15-nov-05 2f28 Cl
  Title: crystal structure of the human sialidase neu2 q116e mutant
  Author: l. m. g. chavas, r. kato, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, ganglioside, drug design
  
• 2f29.pdb. hydrolase 15-nov-05 2f29
  Title: crystal structure of the human sialidase neu2 q116e mutant in complex with dana inhibitor
  Author: l. m. g. chavas, r. kato, p. fusi, c. tringali, b. venerando, g. tettamanti, e. monti, s. wakatsuki
  Keywords: neuraminidase, ganglioside, drug design
  
• 2f3j.pdb. transport protein 21-nov-05 2f3j (NMR, 14 structures)
  Title: the solution structure of the ref2-i mrna export factor (residues 1-155).
  Author: a. p. golovanov, g. m. hautbergue, s. a. wilson, l. y. lian
  
  
• 2f3k.pdb. hydrolase 21-nov-05 2f3k
  Title: substrate envelope and drug resistance: crystal structure of r01 in complex with wild-type hiv-1 protease
  Author: m. prabu-jeyabalan, n. m. king, e. a. nalivaika, g. heilek-snyder, n. cammack, c. a. schiffer
  Keywords: drug resistance, hiv protease, ro1
  
• 2f8u.pdb. deoxyribonucleic acid 03-dec-05 2f8u (NMR, 10 structures)
  Title: solution structure of g-quadruplex formed in the human bcl- 2 promoter
  Author: j. dai, d. chen, m. carver, d. yang
  Keywords: bcl-2 promoter, dna, nmr
  
• 2fco.pdb. hydrolase 12-dec-05 2fco Mg
  Title: crystal structure of bacillus stearothermophilus prfa- holliday junction resolvase
  Author: j. li, m. j. jedrzejas
  Keywords: flexibility
  
• 2fel.pdb. isomerase 16-dec-05 2fel Cl
  Title: 3-carboxy-cis,cis-muconate lactonizing enzyme from agrobacterium radiobacter s2
  Author: l. lehtio, a. goldman
  Keywords: sulphonic acids, 3-sulphomuconate, cycloisomerase, agrobacterium radiobacter s2
  
• 2fen.pdb. isomerase 16-dec-05 2fen Cl
  Title: 3-carboxy-cis,cis-muconate lactonizing enzyme from agrobacterium radiobacter s2
  Author: l. lehtio, a. goldman
  Keywords: sulphonic acids, 3-sulphomuconate, cycloisomerase, agrobacterium radiobacter s2
  
• 2fgc.pdb. transferase 21-dec-05 2fgc Mg Se
  Title: crystal structure of acetolactate synthase- small subunit from thermotoga maritima
  Author: j. j. petkowski, m. chruszcz, m. d. zimmerman, h. zheng, m. t. cymborowski, k. d. koclega, m. kudritska, w. minor, midwest center for structural genomics (mcsg)
  Keywords: regulatory subunit, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2fjs.pdb. oxidoreductase 03-jan-06 2fjs Cu
  Title: crystal structure of anaerobically reduced wild type nitrite reductase from a. faecalis
  Author: e. i. tocheva, m. e. p. murphy
  Keywords: cupredoxin fold
  
• 2fju.pdb. signaling protein,apoptosis/hydrolase 03-jan-06 2fju Mg Ca
  Title: activated rac1 bound to its effector phospholipase c beta 2
  Author: m. r. jezyk, j. t. snyder, t. k. harden, j. sondek
  
  
• 2fkg.pdb. de novo protein 04-jan-06 2fkg
  Title: the crystal structure of engineered ospa
  Author: k. makabe, v. terechko, g. gawlak, s. yan, s. koide
  
  
• 2fkj.pdb. de novo protein 04-jan-06 2fkj
  Title: the crystal structure of engineered ospa
  Author: k. makabe, v. terechko, g. gawlak, s. yan, s. koide
  
  
• 2flh.pdb. plant protein 06-jan-06 2flh Na
  Title: crystal structure of cytokinin-specific binding protein from mung bean in complex with cytokinin
  Author: o. pasternak
  Keywords: zeatin, pathogenesis-related proteins, multiple- ligand binding
  
• 2flt.pdb. hydrolase 06-jan-06 2flt
  Title: the x-ray structure of the cis-3-chloroacrylic acid dehalogenase cis-caad inactivated with (r)-oxirane-2- carboxylate
  Author: r. m. de jong
  Keywords: 4ot family, hydratase, covalent inhibitor, 4-oxalocrotonate tautomerase
  
• 2flz.pdb. hydolase 06-jan-06 2flz
  Title: the x-ray structure of cis-3-chloroacrylic acid dehalogenase (cis-caad) with a sulfate ion bound in the active site
  Author: r. m. de jong
  Keywords: 4ot, hydratase, dehalogenation, 4-oxalocrotonate tautomerase
  
• 2fm3.pdb. oxidoreductase 06-jan-06 2fm3
  Title: crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with substrate (pyruvic acid) and cofactor (b-nicotinamide adenine dinucleotide)
  Author: d. chattopadhyay, o. a. senkovich
  
  
• 2frp.pdb. virus/viral protein 19-jan-06 2frp
  Title: bacteriophage hk97 expansion intermediate iv
  Author: l. gan, j. a. speir, j. f. conway, g. lander, n. cheng, b. a. firek, r. w. hendrix, r. l. duda, l. liljas, j. e. johnson
  Keywords: hk97, capsid protein, expansion intermediate
  
• 2fs3.pdb. virus/viral protein 20-jan-06 2fs3
  Title: bacteriophage hk97 k169y head i
  Author: l. gan, j. a. speir, j. f. conway, g. lander, n. cheng, b. a. firek, r. w. hendrix, r. l. duda, l. liljas, j. e. johnson
  Keywords: hk97, capsid, expansion intermediate
  
• 2fsy.pdb. virus/viral protein 23-jan-06 2fsy
  Title: bacteriophage hk97 pepsin-treated expansion intermediate iv
  Author: l. gan, j. a. speir, j. f. conway, g. lander, n. cheng, b. a. firek, r. w. hendrix, r. l. duda, l. liljas, j. e. johnson
  Keywords: hk97, capsid protein, expansion intermediate
  
• 2ft1.pdb. virus/viral protein 23-jan-06 2ft1
  Title: bacteriophage hk97 head ii
  Author: l. gan, j. a. speir, j. f. conway, g. lander, n. cheng, b. a. firek, r. w. hendrix, r. l. duda, l. liljas, j. e. johnson
  Keywords: hk97, capsid protein, mature capsid
  
• 2fte.pdb. virus/viral protein 24-jan-06 2fte (cryo-electron microscopy)
  Title: bacteriophage hk97 expansion intermediate iv
  Author: l. gan, j. a. speir, j. f. conway, g. lander, n. cheng, b. a. firek, r. w. hendrix, r. l. duda, l. liljas, j. e. johnson
  Keywords: hk97, capsid protein, expansion intermediate
  
• 2fxm.pdb. contractile protein 06-feb-06 2fxm Hg
  Title: structure of the human beta-myosin s2 fragment
  Author: w. blankenfeldt, n. h. thoma, j. s. wray, m. gautel, i. schlichting
  Keywords: parallel), familial hypertrophic cardiomyopathy, thick filament
  
• 2fxo.pdb. contractile protein 06-feb-06 2fxo
  Title: structure of the human beta-myosin s2 fragment
  Author: w. blankenfeldt, n. h. thoma, j. s. wray, m. gautel, i. schlichting
  Keywords: parallel), familial hypertrophic cardiomyopathy, fhc-associated mutant e924k, thick filament
  
• 2g1p.pdb. transferase/dna 14-feb-06 2g1p
  Title: structure of e. coli dna adenine methyltransferase (dam)
  Author: j. r. horton, k. liebert, m. bekes, a. jeltsch, x. cheng
  
  
• 2g3b.pdb. transcription 17-feb-06 2g3b Se
  Title: crystal structure of putative tetr-family transcriptional regulator from rhodococcus sp.
  Author: m. chruszcz, e. evdokimova, m. cymborowski, o. kagan, s. wang, k. d. koclega, a. savchenko, a. edwards, w. minor, midwest center for structural genomics (mcsg)
  Keywords: tetr-family, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2g67.pdb. oxidoreductase 24-feb-06 2g67
  Title: e. coli pyruvate dehydrogenase e1 component (apoenzyme)
  Author: w. furey, k. chandrasekhar, p. arjunan
  Keywords: apoenzyme, homodimer
  
• 2g9c.pdb. ribonucleic acid 06-mar-06 2g9c Co
  Title: modified pyrimidines specifically bind the purine riboswitch
  Author: s. d. gilbert, s. j. mediatore, r. t. batey
  Keywords: riboswitch, triaminopyrimidine, rna-ligand complex
  
• 2gb8.pdb. oxidoreductase/electron transport 10-mar-06 2gb8 Fe (NMR, 20 structures)
  Title: solution structure of the complex between yeast iso-1- cytochrome c and yeast cytochrome c peroxidase
  Author: a. n. volkov, j. a. r. worrall, m. ubbink
  Keywords: electron transfer, transient complex
  
• 2gcu.pdb. hydrolase 14-mar-06 2gcu Fe
  Title: x-ray structure of gene product from arabidopsis thaliana at1g53580
  Author: j. g. mccoy, g. e. wesenberg, g. n. phillips jr. , e. bitto, c. a. bingman, center for eukaryotic structural genomics (cesg)
  Keywords: ethe1, structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg
  
• 2gin.pdb. isomerase 29-mar-06 2gin Na
  Title: x-ray structure of the wt allene oxide cyclase 2 from arabidopsis thaliana
  Author: e. hofmann, f. schaller, p. zerbe
  
  
• 2gmh.pdb. oxidoreductase 06-apr-06 2gmh Na Fe
  Title: structure of porcine electron transfer flavoprotein- ubiquinone oxidoreductase in complexed with ubiquinone
  Author: j. zhang, f. e. frerman, j. -j. p. kim
  Keywords: oxidoreductase, flavoprotein, ubiquinone
  
• 2gmj.pdb. oxidoreductase 06-apr-06 2gmj Fe
  Title: structure of porcine electron transfer flavoprotein- ubiquinone oxidoreductase
  Author: j. zhang, f. e. frerman, j. -j. p. kim
  Keywords: flavoprotein, oxidoreductase, ubiquinone
  
• 2gmr.pdb. photosynthesis 07-apr-06 2gmr Mg Fe
  Title: photosynthetic reaction center mutant from rhodobacter sphaeroides with asp l210 replaced with asn
  Author: j. m. stachnik, s. hermes, k gerwert, e. hofmann
  Keywords: integral membrane protein, electron transport, proton transfer, l210dn, mutant, x-ray crystallography
  
• 2gnu.pdb. photosynthesis 11-apr-06 2gnu Cl Mg Fe
  Title: the crystallization of reaction center from rhodobacter sphaeroides occurs via a new route
  Author: p. wadsten, a. b. woehri, a. snijder, g. katona, a. t. gardiner, r. j. cogdell, r. neutze, s. engstroem
  Keywords: ubiquinone b
  
• 2goy.pdb. oxidoreductase 14-apr-06 2goy Fe
  Title: crystal structure of assimilatory adenosine 5'- phosphosulfate reductase with bound aps
  Author: j. chartron, k. s. carroll, c. shiau, h. gao, j. a. leary, c. r. bertozzi, c. d. stout
  Keywords: nucleotide binding, adenosine 5'- phosphosulfate, thiosulfonate intermediate
  
• 2gqg.pdb. transferase 20-apr-06 2gqg Cl
  Title: x-ray crystal structure of dasatinib (bms-354825) bound to activated abl kinase domain
  Author: h. e. klei
  
  
• 2grb.pdb. ribonucleic acid 24-apr-06 2grb Sr K Br
  Title: crystal structure of an rna quadruplex containing inosine- tetrad
  Author: b. pan, k. shi, m. sundaralingam
  
  
• 2gs4.pdb. metal binding protein 25-apr-06 2gs4 Se
  Title: the crystal structure of the e.coli stress protein ycif.
  Author: a. hindupur, d. liu, y. zhao, h. d. bellamy, m. a. white, r. o. fox
  Keywords: rubrerythrin
  
• 2gv1.pdb. hydrolase 02-may-06 2gv1 (NMR, 20 structures)
  Title: nmr solution structure of the acylphosphatase from eschaerichia coli
  Author: k. pagano, a. corazza, p. viglino, g. esposito
  
  
• 2gvq.pdb. transferase 03-may-06 2gvq
  Title: anthranilate phosphoribosyl-transferase (trpd) from s. solfataricus in complex with anthranilate
  Author: m. marino, m. deuss, r. sterner, o. mayans
  
  
• 2h11.pdb. transferase 15-may-06 2h11
  Title: amino-terminal truncated thiopurine s-methyltransferase complexed with s-adenosyl-l-homocysteine
  Author: j. r. horton, x. cheng
  
  
• 2h3a.pdb. immune system/dna 22-may-06 2h3a (NMR, 20 structures)
  Title: structural basis for nucleic acid and toxin recognition of the bacterial antitoxin ccda
  Author: t. madl, l. van melderen, m. respondek, m. oberer, w. keller, k. zangger
  
  
• 2h3c.pdb. immune system/dna 22-may-06 2h3c (NMR, 20 structures)
  Title: structural basis for nucleic acid and toxin recognition of the bacterial antitoxin ccda
  Author: t. madl, l. van melderen, m. respondek, m. oberer, w. keller, k. zangger
  
  
• 2h3x.pdb. oxidoreductase/electron transport 23-may-06 2h3x Cu
  Title: crystal structure of an electron transfer complex between aromatic amine dehydrogenase and azurin from alcaligenes faecalis (form 3)
  Author: n. sukumar, z. chen, d. leys, n. s. scrutton, d. ferrati, a. merli, g. l. rossi, h. d. bellamy, a. chistoserdov, v. l. davidson, f. s. mathews
  Keywords: tryptophan tryptophylquinone,cupredoxin, electron transfer
  
• 2h47.pdb. oxidoreductase/electron transport 23-may-06 2h47 Cu
  Title: crystal structure of an electron transfer complex between aromatic amine dephydrogenase and azurin from alcaligenes faecalis (form 1)
  Author: n. sukumar, z. chen, d. leys, n. s. scrutton, d. ferrati, a. merli, g. l. rossi, h. d. bellamy, a. chistoserdov, v. l. davidson, f. s. mathews
  Keywords: tryptophan tryptophylquinone, cupredoxin, electron transfer
  
• 2h49.pdb. ribonucleic acid 23-may-06 2h49 (NMR, 20 structures)
  Title: the nmr structure of an internal loop from 23s ribosomal rna of deinococcus radiodurans differs from the structure in the crystal of the ribosomal subunit
  Author: n. shankar
  Keywords: comparison between crystal structure and nmr structure, thermodynamics of internal loop
  
• 2h8h.pdb. transferase 07-jun-06 2h8h Cl
  Title: src kinase in complex with a quinazoline inhibitor
  Author: l. r. otterbein, r. norman, r. a. pauptit, s. rowsell, j. breed
  
  
• 2h9c.pdb. lyase 09-jun-06 2h9c
  Title: native crystal structure of the isochorismate-pyruvate lyase from pseudomonas aeruginosa
  Author: a. l. lamb, j. zaitseva, j. lu
  
  
• 2h9d.pdb. lyase 09-jun-06 2h9d Ca
  Title: pyruvate-bound structure of the isochorismate-pyruvate lyase from pseudomonas aerugionsa
  Author: a. l. lamb, j. zaitseva, j. lu
  
  
• 2hdp.pdb. ligase 20-jun-06 2hdp Zn (NMR, 20 structures)
  Title: solution structure of hdm2 ring finger domain
  Author: m. kostic, t. matt, m. yamout-martinez, h. j. dyson, p. e. wright
  Keywords: homodimer
  
• 2heo.pdb. immune system/dna 21-jun-06 2heo
  Title: general structure-based approach to the design of protein ligands: application to the design of kv1.2 potassium channel blockers.
  Author: c. magis, s. gasparini, j. b. charbonnier, e. stura, m. h. le du, a. menez, p. cuniasse
  
  
• 2hkd.pdb. de novo protein 03-jul-06 2hkd
  Title: the crystal structure of engineered ospa
  Author: k. makabe, v. terechko, s. koide
  Keywords: engineered protein
  
• 2hko.pdb. oxidoreductase 05-jul-06 2hko
  Title: crystal structure of lsd1
  Author: y. chen, y. t. yang, f. wang, k. yanane, y. zhang, m. lei
  Keywords: fad binding domain, coiled-coil, amine oxidase domain
  
• 2hsq.pdb. cell adhesion, structural protein 22-jul-06 2hsq
  Title: human vinculin (head domain, vh1, residues 1-258) in complex with shigella's ipaa vinculin binding site 2 (residues 565-587)
  Author: t. izard
  
  
• 2htn.pdb. metal binding protein, oxidoreductase 26-jul-06 2htn Fe
  Title: e. coli bacterioferritin in its as-isolated form
  Author: a. van eerde, s. wolterink-van loo, j. van der oost, b. w. dijkstra
  Keywords: ferroxidase centre, haem, protein shell, iron binding site
  
• 2hue.pdb. dna binding protein 26-jul-06 2hue Zn
  Title: structure of the h3-h4 chaperone asf1 bound to histones h3 and h4
  Author: c. m english, m. e. a. churchill, j. k. tyler
  Keywords: elongated beta sandwhich
  
• 2huf.pdb. transferase 26-jul-06 2huf
  Title: crystal structure of aedes aegypti alanine glyoxylate aminotransferase
  Author: q. han, h. robinson, y. g. gao, n. vogelaar, s. r. wilson, m. rizzi, j. li
  Keywords: plp-dependent transferase
  
• 2hui.pdb. transferase 26-jul-06 2hui
  Title: crystal structure of aedes aegypti alanine glyoxylate aminotransferase in complex with glyoxylic acid
  Author: q. han, h. robinson, y. g. gao, n. vogelaar, s. r. wilson, m. rizzi, j. li
  Keywords: plp-dependent transferase
  
• 2huu.pdb. transferase 27-jul-06 2huu
  Title: crystal structure of aedes aegypti alanine glyoxylate aminotransferase in complex with alanine
  Author: q. han, h. robinson, y. g. gao, n. vogelaar, s. r. wilson, m. rizzi, j. li
  Keywords: plp-dependent transferase
  
• 2hv8.pdb. protein transport 27-jul-06 2hv8 Mg
  Title: crystal structure of gtp-bound rab11 in complex with fip3
  Author: s. eathiraj, a. mishra, r. prekeris, d. g. lambright
  Keywords: rab11a, fip3, cytokinesis, recycling endosomes
  
• 2hvz.pdb. rna binding protein 31-jul-06 2hvz (NMR, 20 structures)
  Title: solution structure of the rrm domain of sr rich factor 9g8
  Author: a. m. tintaru, g. m. hautbergue, a. p. golovanov, l. y. lian, s. a. wilson
  
  
• 2hwn.pdb. transferase 01-aug-06 2hwn
  Title: crystal structure of rii alpha dimerization/docking domain of pka bound to the d-akap2 peptide
  Author: f. kinderman, c. kim
  Keywords: akap, dimerization/docking, d/d, regulatory subunit
  
• 2hyv.pdb. metal binding protein 07-aug-06 2hyv Ca
  Title: human annexin a2 with heparin hexasaccharide bound
  Author: c. shao, j. f. head, b. a. seaton
  Keywords: membrane-binding protein, helix bundle, heparin, hexasaccharide
  
• 2hze.pdb. electron transport, oxidoreductase 08-aug-06 2hze As
  Title: crystal structures of a poxviral glutaredoxin in the oxidized and reduced states show redox-correlated structural changes
  Author: j. p. bacik, b. hazes
  Keywords: arsenic, dimethylarsenite.
  
• 2hzf.pdb. electron transport, oxidoreductase 08-aug-06 2hzf
  Title: crystal structures of a poxviral glutaredoxin in the oxidized and reduced states show redox-correlated structural changes
  Author: j. p. bacik, b. hazes
  
  
• 2i0b.pdb. membrane protein 10-aug-06 2i0b
  Title: crystal structure of the glur6 ligand binding core elkq mutant dimer at 1.96 angstroms resolution
  Author: m. l. mayer
  
  
• 2i0c.pdb. membrane protein 10-aug-06 2i0c
  Title: crystal structure of the glur6 ligand binding core dimer crosslinked by disulfide bonds between y490c and l752c at 2.25 angstroms resolution
  Author: m. l. mayer
  
  
• 2i19.pdb. transferase 13-aug-06 2i19 Mg
  Title: t. brucei farnesyl diphosphate synthase complexed with bisphosphonate
  Author: r. cao, j. mao, y. gao, h. robinson, s. odeh, a. goddard, e. oldfield
  
  
• 2i2x.pdb. transferase 17-aug-06 2i2x Co K Zn
  Title: crystal structure of methanol:cobalamin methyltransferase complex mtabc from methanosarcina barkeri
  Author: c. h. hagemeier, m. kruer, r. k. thauer, e. warkentin, u. ermler
  
  
• 2i39.pdb. virus/viral protein 17-aug-06 2i39
  Title: crystal structure of vaccinia virus n1l protein
  Author: m. aoyagi, a. e. aleshin, b. stec, r. c. liddington
  
  
• 2i5d.pdb. hydrolase 24-aug-06 2i5d
  Title: crystal structure of human inosine triphosphate pyrophosphatase
  Author: j. c. porta, s. g. kozmin, y. i. pavlov, g. e. o. borgstahl
  
  
• 2i5p.pdb. oxidoreductase 25-aug-06 2i5p
  Title: crystal structure of glyceraldehyde-3-phosphate dehydrogenase isoform 1 from k. marxianus
  Author: f. ferreira-da-silva, p. j. b. pereira, l. gales, p. moradas- ferreira, a. m. damas
  Keywords: apo form, dimer, gapdh
  
• 2i65.pdb. hydrolase 28-aug-06 2i65
  Title: structural basis for the mechanistic understanding human cd38 controlled multiple catalysis
  Author: q. liu, i. a. kriksunov, r. graeff, c. munshi, h. c. lee, q. hao
  Keywords: reaction product, reaction intermediate
  
• 2i66.pdb. hydrolase 28-aug-06 2i66
  Title: structural basis for the mechanistic understanding human cd38 controlled multiple catalysis
  Author: q. liu, i. a. kriksunov, r. graeff, c. munshi, h. c. lee, q. hao
  Keywords: reaction product, reaction intermediate
  
• 2i67.pdb. hydrolase 28-aug-06 2i67
  Title: structural basis for the mechanistic understanding human cd38 controlled multiple catalysis
  Author: q. liu, i. a. kriksunov, r. graeff, c. munshi, h. c. lee, q. hao
  Keywords: reaction product, reaction intermediate
  
• 2i69.pdb. virus/viral protein 28-aug-06 2i69
  Title: crystal structure of the west nile virus envelope glycoprotein
  Author: r. kanai, y. modis
  Keywords: receptor binding, antibody epitope, igc, beta sandwich, glycoprotein
  
• 2i82.pdb. lyase/rna 31-aug-06 2i82 F Se
  Title: crystal structure of pseudouridine synthase rlua: indirect sequence readout through protein-induced rna structure
  Author: c. hoang
  
  
• 2i83.pdb. cell adhesion 01-sep-06 2i83 (NMR, 20 structures)
  Title: hyaluronan-binding domain of cd44 in its ligand-bound form
  Author: m. takeda, s. ogino, r. umemoto, m. sakakura, m. kajiwara, k. n. sugahara, h. hayasaka, m. miyasaka, h. terasawa, i. shimada
  
  
• 2i91.pdb. rna binding protein/rna 04-sep-06 2i91 Mg
  Title: 60kda ro autoantigen in complex with a fragment of misfolded rna
  Author: k. m. reinisch, a. j. stein
  Keywords: rossmann-fold, heat repeat, midas motif
  
• 2iaa.pdb. oxidoreductase/electron transport 07-sep-06 2iaa Cu
  Title: crystal structure of an electron transfer complex between aromatic amine dephydrogenase and azurin from alcaligenes faecalis (form 2)
  Author: n. sukumar, z. chen, d. leys, n. s. scrutton, d. ferrati, a. merli, g. l. rossi, h. d. bellamy, a. chistoserdov, v. l. davidson, f. s. mathews
  Keywords: tryptophan tryptophylquinone, cupredoxin, electron transfer
  
• 2ic8.pdb. membrane protein 12-sep-06 2ic8
  Title: crystal structure of glpg
  Author: y. ha
  Keywords: intramembrane proteolysis, membrane protein
  
• 2icz.pdb. deoxyribonucleic acid 13-sep-06 2icz (NMR, 20 structures)
  Title: nmr structures of the expanded dna 10bp xtgxtaxcxgcxaxgt:xactxgcgxtaxca
  Author: s. r. lynch
  Keywords: xdna
  
• 2id3.pdb. transcription 14-sep-06 2id3 Cl Ca Se
  Title: crystal structure of transcriptional regulator sco5951 from streptomyces coelicolor a3(2)
  Author: m. grabowski, m. chruszcz, k. d. koclega, m. cymborowski, j. gu, x. xu, a. savchenko, a. edwards, w. minor, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2if5.pdb. transcription 20-sep-06 2if5 Pr
  Title: structure of the poz domain of human lrf, a master regulator of oncogenesis
  Author: f. d. schubot, d. s. waugh, j. tropea
  Keywords: btb domain, pok, proto oncogene, transcription factor
  
• 2igr.pdb. de novo protein, lipid binding protein 24-sep-06 2igr (NMR, 20 structures)
  Title: solution structure of cb1a, a novel anticancer peptide derived from natural antimicrobial peptide cecropin b
  Author: j. -m. wu
  Keywords: cecropin, antimicrobial peptide, ploycationic peptide, cecropin fingerprint sequence
  
• 2igz.pdb. antibiotic 25-sep-06 2igz (NMR, 19 structures)
  Title: nmr structure of the sterol-dependent antifungal antibiotic bacillomycin lc
  Author: l. volpon, p. tsan, f. besson, j. m. lancelin
  Keywords: antifungal, bacillomycin lc, cyclic lipopeptide
  
• 2ih1.pdb. membrane protein 25-sep-06 2ih1 K
  Title: ion selectivity in a semi-synthetic k+ channel locked in the conductive conformation
  Author: f. i. valiyaveetil, m. leonetti, t. w. muir, r. mackinnon
  
  
• 2ih3.pdb. membrane protein 25-sep-06 2ih3 K
  Title: ion selectivity in a semi-synthetic k+ channel locked in the conductive conformation
  Author: f. i. valiyaveetil, m. leonetti, t. w. muir, r. mackinnon
  
  
• 2ihb.pdb. signaling protein 26-sep-06 2ihb Mg F Al
  Title: crystal structure of the heterodimeric complex of human rgs10 and activated gi alpha 3
  Author: m. soundararajan, a. p. turnbull, e. papagrigoriou, a. c. w. pike, g. bunkoczi, e. ugochukwu, f. gorrec, f. von delft, j. weigelt, a. edwards, c. arrowsmith, m. sundstrom, d. doyle, structural genomics consortium (sgc)
  Keywords: rgs, heterotrimeric g protein, signalling complex, structural genomics, structural genomics consortium, sgc
  
• 2ihd.pdb. signaling protein 26-sep-06 2ihd Cl
  Title: crystal structure of human regulator of g-protein signaling 8, rgs8
  Author: a. p. turnbull, e. papagrigoriou, e. ugochukwu, e. salah, c. gileadi, n. burgess, c. bhatia, o. gileadi, j. bray, j. elkins, f. von delft, j. weigelt, a. edwards, c. arrowsmith, m. sundstrom, d. doyle, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc
  
• 2ii0.pdb. signaling protein 27-sep-06 2ii0
  Title: crystal structure of catalytic domain of son of sevenless (rem-cdc25) in the absence of ras
  Author: t. s. freedman, h. sondermann, g. d. friedland, t. kortemme, d. bar- sagi, s. marqusee, j. kuriyan
  
  
• 2ije.pdb. signaling protein 29-sep-06 2ije
  Title: crystal structure of the cdc25 domain of rasgrf1
  Author: t. s. freedman, j. kuriyan
  Keywords: cdc25 domain, ras guanine nucleotide releasing factor, ras-specific nucleotide exchange factor
  
• 2ijp.pdb. signaling protein 30-sep-06 2ijp U
  Title: crystal structure of a 14-3-3 protein from cryptosporidium parvum (cgd1_2980)
  Author: a. k. wernimont, a. dong, w. qiu, j. lew, g. a. wasney, m. vedadi, i. kozieradzki, y. zhao, h. ren, z. alam, l. y. lin, m. sundstrom, j. weigelt, c. h. arrowsmith, a. m. edwards, a. bochkarev, r. hui, s. brokx, structural genomics consortium (sgc)
  Keywords: cell regulator protein, structural genomics consortium, sgc
  
• 2ik8.pdb. signaling protein 02-oct-06 2ik8 Mg F Al
  Title: crystal structure of the heterodimeric complex of human rgs16 and activated gi alpha 1
  Author: m. soundararajan, a. p. turnbull, e. papagrigoriou, j. debreczeni, f. gorrec, f. von delft, j. weigelt, a. edwards, c. arrowsmith, m. sundstrom, d. doyle, structural genomics consortium (sgc)
  Keywords: rgs, heterotrimeric g protein, signalling complex, structural genomics, structural genomics consortium, sgc
  
• 2ikb.pdb. structural genomics, unknown function 02-oct-06 2ikb Se
  Title: crystal structure of a hypothetical protein nmb1012 from neisseria meningitidis
  Author: r. zhang, h. li, m. bargassa, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: neisseria meningitidis, psi-2, mcsg, protein structure initiative, midwest center for structural genomics
  
• 2iko.pdb. hydrolase 02-oct-06 2iko F
  Title: crystal structure of human renin complexed with inhibitor
  Author: i. mochalkin
  Keywords: inhibitors, drug design
  
• 2in3.pdb. isomerase 05-oct-06 2in3 Se
  Title: crystal structure of a putative protein disulfide isomerase from nitrosomonas europaea
  Author: m. e. cuff, t. skarina, o. onopriyenko, a. edwards, a. savchenko, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: frne-like subfamily, disulfide isomerase, structural genomics, nitrosomonas europaea, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2ine.pdb. oxidoreductase 06-oct-06 2ine
  Title: crystal structure of aldose reductase complexed with phenylacetic acid
  Author: d. h. t. harrison, a. milne, j. m. brownlee
  Keywords: ari, aldo-keto reductase
  
• 2inz.pdb. oxidoreductase 09-oct-06 2inz
  Title: crystal structure of aldose reductase complexed with 2- hydroxyphenylacetic acid
  Author: d. h. t. harrison, e. pape, e. carlson, j. m. brownlee
  Keywords: ari, aldo-keto reductase
  
• 2io2.pdb. protein binding, hydrolase 09-oct-06 2io2
  Title: crystal structure of human senp2 in complex with rangap1- sumo-1
  Author: d. reverter, c. d. lima
  Keywords: ubiquitin, senp, ulp, complex
  
• 2iop.pdb. chaperone 10-oct-06 2iop
  Title: crystal structure of full-length htpg, the escherichia coli hsp90, bound to adp
  Author: a. k. shiau, s. f. harris, d. a. agard
  Keywords: chaperone, hsp90
  
• 2ioq.pdb. chaperone 10-oct-06 2ioq
  Title: crystal structure of full-length htpg, the escherichia coli hsp90
  Author: a. k. shiau, s. f. harris, d. a. agard
  Keywords: chaperone, hsp90
  
• 2ior.pdb. chaperone 10-oct-06 2ior Mg
  Title: crystal structure of the n-terminal domain of htpg, the escherichia coli hsp90, bound to adp
  Author: a. k. shiau, s. f. harris, d. a. agard
  Keywords: chaperone, hsp90
  
• 2is7.pdb. oxidoreductase 16-oct-06 2is7 Cl
  Title: crystal structure of aldose reductase complexed with dichlorophenylacetic acid
  Author: d. h. t. harrison, a. milne, j. m. brownlee
  Keywords: ari, aldo-keto reductase
  
• 2ise.pdb. toxin 17-oct-06 2ise Zn
  Title: botulinum neurotoxin a light chain wt crystal form a
  Author: a. t. brunger, c. m. stegmann
  
  
• 2isg.pdb. toxin 17-oct-06 2isg Zn Ni
  Title: botulinum neurotoxin a light chain wt crystal form b
  Author: a. t. brunger, c. m. stegmann
  
  
• 2ish.pdb. toxin 17-oct-06 2ish Zn
  Title: botulinum neurotoxin a light chain wt crystal form c
  Author: a. t. brunger, c. m. stegmann
  
  
• 2iwt.pdb. oxidoreductase 04-jul-06 2iwt
  Title: thioredoxin h2 (hvtrxh2) in a mixed disulfide complex with the target protein basi
  Author: k. maeda, p. hagglund, c. finnie, b. svensson, a. henriksen
  Keywords: disulfide reductase, basi, amy2, redox, thioredoxin, oxidoreductase, substrate recognition, disulfide intermediate, alpha-amylase inhibitor, serine protease inhibitor
  
• 2izy.pdb. transferase 27-jul-06 2izy
  Title: molecular basis of akap specificity for pka regulatory subunits
  Author: m. g. gold, b. lygren, p. dokurno, n. hoshi, g. mcconnachie, k. tasken, c. r. carlson, j. d. scott, d. barford
  Keywords: rii, pka, camp, kinase, acetylation, transferase, camp-binding, phosphorylation, nucleotide-binding
  
• 2j1r.pdb. carbohydrate-binding protein 15-aug-06 2j1r Ca
  Title: structure of a streptococcus pneumoniae fucose binding module
  Author: a. b. boraston, d. wang, r. d. burke
  Keywords: carbohydrate-binding protein
  
• 2j1s.pdb. carbohydrate-binding protein 15-aug-06 2j1s Ca
  Title: structure of a streptococcus pneumoniae fucose binding module in complex with fucose
  Author: a. b. boraston, d. wang, r. d. burke
  
  
• 2j1t.pdb. carbohydrate-binding protein 15-aug-06 2j1t Ca
  Title: structure of a streptococcus pneumoniae fucose binding module in complex with the lewis y antigen
  Author: a. b. boraston, d. wang, r. d. burke
  
  
• 2j1u.pdb. carbohydrate-binding protein 15-aug-06 2j1u Ca
  Title: structure of a streptococcus pneumoniae fucose binding module in complex with the blood group a-tetrasaccharide
  Author: a. b. boraston, d. wang, r. d. burke
  Keywords: carbohydrate-binding protein
  
• 2j1v.pdb. carbohydrate-binding protein 15-aug-06 2j1v Ca
  Title: structure of a streptococcus pneumoniae fucose binding module in complex with the blood group h-trisaccharide
  Author: a. b. boraston, d. wang, r. d. burke
  
  
• 2j22.pdb. carbohydrate-binding protein 15-aug-06 2j22 Ca
  Title: structure of a streptococcus pneumoniae fucose binding module, spx-3
  Author: a. b. boraston, d. wang, r. d. burke
  
  
• 2j4i.pdb. hydrolase 31-aug-06 2j4i Cl Ca
  Title: crystal structure of a human factor xa inhibitor complex
  Author: r. j. young, m. campbell, a. d. borthwick, d. brown, c. chan, m. a. convery, m. c. crowe, s. dayal, h. diallo, h. a. kelly, n. paul king, s. kleanthous, c. l. kurtis, a. m. mason, j. e. mordaunt, c. patel, a. j. pateman, s. senger, g. p. shah, p. w. smith, n. s. watson, h. e. weston, p. zhou
  Keywords: calcium, egf-like domain, gamma- carboxyglutamic acid, glycoprotein, hydrolase, hydroxylation, polymorphism, protease, serine protease, zymogen, complex
  
• 2j7l.pdb. chaperone/surface active protein 12-oct-06 2j7l
  Title: e.coli p pilus chaperone papd in complex with a pilus biogenesis inhibitor, pilicide 2c
  Author: h. remaut, j. s. pinkner, s. j. hultgren, f. almqvist, g. waksman
  Keywords: inhibitor, chaperone, periplasmic, immunoglobulin domain, chaperone/surface active protein
  
• 2j87.pdb. transferase 23-oct-06 2j87 Mg Zn
  Title: structure of vaccinia virus thymidine kinase in complex with dttp: insights for drug design
  Author: k. el omari, n. solaroli, a. karlsson, j. balzarini, d. k. stammers
  Keywords: dna synthesis, nucleotide-binding, dttp, kinase, transferase, atp-binding, vaccinia virus thymidine kinase
  
• 2j8q.pdb. nuclear protein 27-oct-06 2j8q
  Title: crystal structure of human cleavage and polyadenylation specificity factor 5 (cpsf5) in complex with a sulphate ion.
  Author: m. moche, p. stenmark, d. ogg, c. arrowsmith, h. berglund, r. busam, r. collins, a. edwards, u. b. ericsson, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, s. l. holmberg, m. hogbom, i. johansson, t. karlberg, u. kosinska, t. kotenyova, a. magnusdottir, m. e. nilsson, p. nilsson-ehle, t. nyman, c. persson, j. sagemark, m. sundstrom, j. uppenberg, m. upsten, a. g. thorsell, s. van den berg, k. wallden, j. weigelt, m. welin, p. nordlund
  Keywords: rna-binding, mrna processing, phosphorylation, 3'mrna cleavage and polyadenylation factor
  
• 2j9h.pdb. transferase 08-nov-06 2j9h
  Title: crystal structure of human glutathione-s-transferase p1-1 cys-free mutant in complex with s-hexylglutathione at 2.4 a resolution
  Author: k. tars, u. hegazy, u. hellman, b. mannervik
  Keywords: transferase, glutathione, polymorphism, glutathione transferase
  
• 2nlk.pdb. hydrolase 20-oct-06 2nlk
  Title: crystal structure of d1 and d2 catalytic domains of human protein tyrosine phosphatase gamma (d1+d2 ptprg)
  Author: p. filippakopoulos, o. gileadi, c. johansson, e. ugochukwu, a. edwards, c. arrowsmith, m. sundstrom, f. von delft, s. knapp, structural genomics consortium (sgc)
  Keywords: r-ptp gamma, protein tyrosine phosphatase gamma, d3s1249, hptpg, rptpg, ptpg, d1-d2 catalytic domains, structural genomics, structural genomics consortium, sgc
  
• 2nmq.pdb. signaling protein 23-oct-06 2nmq (NMR)
  Title: simultaneous determination of protein structure and dynamics using rdcs
  Author: m. blackledge, g. bouvignies, r. brueschweiler, p. markwick
  Keywords: nmr, simultaneous structure and dynamics, high resolution
  
• 2nn2.pdb. transcription 23-oct-06 2nn2
  Title: crystal structure of the btb domain from the lrf/zbtb7 transcriptional regulator
  Author: p. j. stogios, l. chen, g. g. prive
  Keywords: transcription repressor, zinc-finger protein, btb domain, candidate oncoprotein, poz domain
  
• 2nn5.pdb. structural genomics, unknown function 23-oct-06 2nn5 Mg Se
  Title: conserved hypothetical protein ef_2215 from enterococcus faecalis
  Author: j. osipiuk, r. wu, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: apc29336, hypothetical protein, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2nnn.pdb. transcription 24-oct-06 2nnn Se
  Title: crystal structure of probable transcriptional regulator from pseudomonas aeruginosa
  Author: c. chang, e. evdokimova, s. altamentova, a. savchenko, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: probable transcriptional regulator, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2nob.pdb. hydrolase, lyase/dna 25-oct-06 2nob Ca
  Title: structure of catalytically inactive h270a human 8- oxoguanine glycosylase crosslinked to 8-oxoguanine dna
  Author: c. t. radom, a. banerjee, g. l. verdine
  Keywords: dna repair, 8-oxoguanine
  
• 2noe.pdb. hydrolase, lyase/dna 25-oct-06 2noe Ca
  Title: structure of catalytically inactive g42a human 8-oxoguanine glycosylase complexed to 8-oxoguanine dna
  Author: c. t. radom, a. banerjee, g. l. verdine
  Keywords: dna repair, 8-oxoguanine
  
• 2nof.pdb. hydrolase, lyase/dna 25-oct-06 2nof Ca
  Title: structure of q315f human 8-oxoguanine glycosylase proximal crosslink to 8-oxoguanine dna
  Author: c. t. radom, a. banerjee, g. l. verdine
  Keywords: dna repair, 8-oxoguanine
  
• 2noh.pdb. hydrolase, lyase/dna 25-oct-06 2noh Ca
  Title: structure of catalytically inactive q315a human 8- oxoguanine glycosylase complexed to 8-oxoguanine dna
  Author: c. t. radom, a. banerjee, g. l. verdine
  Keywords: dna repair, 8-oxoguanine
  
• 2noi.pdb. hydrolase, lyase/dna 25-oct-06 2noi Ca
  Title: structure of g42a human 8-oxoguanine glycosylase crosslinked to undamaged g-containing dna
  Author: c. t. radom, a. banerjee, g. l. verdine
  Keywords: dna repair, 8-oxoguanine
  
• 2nol.pdb. hydrolase, lyase/dna 25-oct-06 2nol Ca
  Title: structure of catalytically inactive human 8-oxoguanine glycosylase distal crosslink to oxog dna
  Author: a. banerjee, c. t. radom, g. l. verdine
  Keywords: dna repair, 8-oxoguanine
  
• 2noq.pdb. ribosome 26-oct-06 2noq (cryo-electron microscopy)
  Title: structure of ribosome-bound cricket paralysis virus ires rna
  Author: m. schuler, s. r. connell, a. lescoute, j. giesebrecht, m. dabrowski, b. schroeer, t. mielke, p. a. penczek, e. westhof, c. m. t. spahn
  Keywords: ribosome, translation, internal initiation
  
• 2noz.pdb. hydrolase, lyase/dna 26-oct-06 2noz Ca
  Title: structure of q315f human 8-oxoguanine glycosylase distal crosslink to 8-oxoguanine dna
  Author: c. t. radom, a. banerjee, g. l. verdine
  Keywords: dna repair, 8-oxoguanine
  
• 2nq6.pdb. hydrolase 30-oct-06 2nq6 Co Ca
  Title: crystal structure of human methionine aminopeptidase type 1 in complex with 3-tert-butoxycarbonylaminopyridine-2- carboxylic acid thiazole-2-ylamide
  Author: a. addlagatta, b. w. matthews
  Keywords: pita bread, hydrolase
  
• 2nq7.pdb. hydrolase 30-oct-06 2nq7 Co K
  Title: crystal structure of type 1 human methionine aminopeptidase in complex with 3-(2,2-dimethylpropionylamino)pyridine-2- carboxylic acid thiazole-2-ylamide
  Author: a. addlagatta, b. w. matthews
  
  
• 2nqa.pdb. hydrolase/hydrolase inhibitor 30-oct-06 2nqa Ca
  Title: catalytic domain of human calpain 8
  Author: t. l. davis, r. paramanathan, c. butler-cole, p. j. finerty jr. , j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
  
  
• 2nqo.pdb. transferase 31-oct-06 2nqo
  Title: crystal structure of helicobacter pylori gamma- glutamyltranspeptidase
  Author: g. boanca, a. sand, t. okada, h. suzuki, h. kumagai, k. fukuyama, j. j. barycki
  Keywords: glutamyltranspeptidase
  
• 2nqx.pdb. oxidoreductase 01-nov-06 2nqx I Fe Ca
  Title: crystal structure of bovine lactoperoxidase with iodide ions at 2.9a resolution
  Author: a. k. singh, p. kaur, n. singh, a. bhushan, s. sharma, t. p. singh
  Keywords: crystal structures, complex, iodide ion
  
• 2nr8.pdb. contractile protein 01-nov-06 2nr8 Cl Mg U
  Title: crystal structure of the human kif9 motor domain in complex with adp
  Author: h. zhu, w. tempel, h. he, y. shen, j. wang, g. brothers, r. landry, c. h. arrowsmith, a. m. edwards, m. sundstrom, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: motor domain, adp, structural genomics, structural genomics consortium, sgc
  
• 2nsz.pdb. antitumor protein 06-nov-06 2nsz
  Title: 1.15 angstrom crystal structure of the ma3 domain of pdcd4
  Author: n. laronde-leblanc, a. wlodawer
  Keywords: tumor suppressor, translation
  
• 2nt8.pdb. transferase 07-nov-06 2nt8 Mg
  Title: atp bound at the active site of a pduo type atp:co(i) rrinoid adenosyltransferase from lactobacillus reuteri
  Author: m. st-maurice, p. e. mera, m. p. taranto, f. sesma, j. c. escalante- semerena, i. rayment
  
  
• 2ntn.pdb. oxidoreductase 08-nov-06 2ntn
  Title: crystal structure of maba-c60v/g139a/s144l
  Author: g. poncet-montange, s. ducasse-cabanot, a. quemard, g. labesse, m. cohen-gonsaud
  Keywords: oxidoreductase, inactive, sdr
  
• 2nu0.pdb. hydrolase 08-nov-06 2nu0
  Title: molecular structures of the complexes of sgpb with omtky3 aromatic p1 variants trp18i, his18i, phe18i, and tyr18i
  Author: k. s. bateman, s. anderson, w. lu, m. a. qasim, k. huang, m. laskowski jr. , m. n. g. james
  Keywords: aromatic p1 residue
  
• 2nu1.pdb. hydrolase 08-nov-06 2nu1
  Title: molecular structures of the complexes of sgpb with omtky3 aromatic p1 variants trp18i, his18i, phe18i and tyr18i
  Author: k. s. bateman, s. anderson, w. lu, m. a. qasim, k. huang, m. laskowski jr. , m. n. g. james
  Keywords: aromatic p1 residue
  
• 2nu2.pdb. hydrolase 08-nov-06 2nu2
  Title: accommodation of positively-charged residues in a hydrophobic specificity pocket: crystal structures of sgpb in complex with omtky3 variants lys18i and arg18i
  Author: k. s. bateman, s. anderson, w. lu, m. a. qasim, m. laskowski jr. , m. n. g. james
  Keywords: charged p1 residue
  
• 2nu3.pdb. hydrolase 08-nov-06 2nu3
  Title: accommodation of positively-charged residues in a hydrophobic specificity pocket: crystal structures of sgpb in complex with omtky3 variants lys18i and arg18i
  Author: k. s. bateman, s. anderson, w. lu, m. a. qasim, k. huang, m. laskowski jr. , m. n. g. james
  Keywords: charged p1 residue
  
• 2nu4.pdb. hydrolase 08-nov-06 2nu4
  Title: accommodation of positively-charged residues in a hydrophobic specificity pocket: crystal structures of sgpb in complex with omtky3 variants lys18i and arg18i
  Author: k. s. bateman, s. anderson, w. lu, m. a. qasim, m. laskowski jr. , m. n. g. james
  Keywords: charged p1 residue
  
• 2nuu.pdb. transport protein/signaling protein 09-nov-06 2nuu
  Title: regulating the escherichia coli ammonia channel: the crystal structure of the amtb-glnk complex
  Author: m. j. conroy, a. durand, d. lupo, x. -d. li, p. a. bullough, f. k. winkler, m. merrick
  Keywords: nitrogen regulation, ammonia transport
  
• 2nv4.pdb. structural genomics, unknown function 10-nov-06 2nv4 Se
  Title: crystal structure of upf0066 protein af0241 in complex with s-adenosylmethionine. northeast structural genomics consortium target gr27
  Author: a. p. kuzin, m. abashidze, j. seetharaman, s. m. vorobiev, y. fang, k. cunningham, l. c. ma, r. xiao, j. liu, m. baran, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
  
• 2nv5.pdb. hydrolase 10-nov-06 2nv5
  Title: crystal structure of a c-terminal phosphatase domain of rattus norvegicus ortholog of human protein tyrosine phosphatase, receptor type, d (ptprd)
  Author: j. b. bonanno, j. gilmore, k. t. bain, m. iizuka, w. xu, s. wasserman, d. smith, m. j. sauder, s. k. burley, s. c. almo, new york structural genomics research consortium (nysgrc)
  Keywords: structural genomics, psi, protein structure initiative, new york structural genomics research consortium, nysgrc
  
• 2nv6.pdb. oxidoreductase 10-nov-06 2nv6 Zn
  Title: mycobacterium tuberculosis inha (s94a) bound with inh-nad adduct
  Author: f. wang, j. c. sacchettini
  Keywords: s94a, tuberculosis, isoniazid
  
• 2nvw.pdb. transcription 13-nov-06 2nvw
  Title: crystal sctucture of transcriptional regulator gal80p from kluyveromymes lactis
  Author: j. b. thoden, c. a. sellick, r. j. reece, h. m. holden
  Keywords: galactose metabolism, repressor
  
• 2nwi.pdb. structural genomics, unknown function 14-nov-06 2nwi
  Title: crystal structure of hypothetical protein o28875 from archaeoglobus fulgidus
  Author: j. b. bonanno, m. dickey, k. t. bain, j. adams, v. sridhar, s. wasserman, d. smith, m. j. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: unknown function, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc