Recent PDB releases or updates: week of 20 October 2006

• 1heu.pdb. oxidoreductase 25-nov-00 1heu Cd
  Title: atomic x-ray structure of liver alcohol dehydrogenase containing cadmium and a hydroxide adduct to nadh
  Author: r. meijers, r. j. morris, h. w. adolph, a. merli, v. s. lamzin, e. s. cedergen-zeppezauer
  
  
• 1i0o.pdb. deoxyribonucleic acid 29-jan-01 1i0o K
  Title: 1.6 a structure of the a-decamer gcgtatacgc with a single 2'-o-methyl-3'-methylenephosphonate thymine in place of t6, high k-salt
  Author: v. tereshko, c. j. wilds, g. minasov, t. p. prakash, m. a. maier, a. howard, z. wawrzak, m. manoharan, m. egli
  Keywords: modified sugar
  
• 1r11.pdb. translation, hydrolase 23-sep-03 1r11
  Title: structure determination of the dimeric endonuclease in a pseudo-face-centerd p21 space group
  Author: h. li, y. zhang
  
  
• 1ug3.pdb. translation 11-jun-03 1ug3
  Title: c-terminal portion of human eif4gi
  Author: l. bellsolell, p. f. cho-park, f. poulin, n. sonenberg, s. k. burley
  Keywords: heat repeat
  
• 1wg3.pdb. replication 27-may-04 1wg3
  Title: structural analysis of yeast nucleosome-assembly factor cia1p
  Author: b. padmanabhan, k. kataoka, t. umehara, n. adachi, s. yokoyama, m. horikoshi
  
  
• 1wlp.pdb. oxidoreductase/signaling protein 29-jun-04 1wlp (NMR)
  Title: solution structure of the p22phox-p47phox complex
  Author: k. ogura, s. torikai, k. saikawa, s. yuzawa, h. sumimoto, f. inagaki
  Keywords: polyproline
  
• 1xt5.pdb. immune system 21-oct-04 1xt5
  Title: crystal structure of vcbp3, domain 1, from branchiostoma floridae
  Author: j. a. hernandez prada, r. n. haire, j. p. cannon, m. allaire, j. jakoncic, v. stojanoff, g. w. litman, d. a. ostrov
  Keywords: vcbp, primordial antigen receptor, florida lancelet, amphioxus
  
• 1y4k.pdb. oxidoreductase 01-dec-04 1y4k Fe
  Title: lipoxygenase-1 (soybean) at 100k, n694g mutant
  Author: m. chruszcz, e. segraves, t. r. holman, w. minor
  Keywords: dioxygenase, metalloprotein, fatty acids, iron
  
• 1yto.pdb. hormone/growth factor 10-feb-05 1yto
  Title: crystal structure of gly19 deletion mutant of human acidic fibroblast growth factor
  Author: j. lee, m. blaber
  
  
• 1z2v.pdb. hormone/growth factor 09-mar-05 1z2v
  Title: crystal structure of glu60 deletion mutant of human acidic fibroblast growth factor
  Author: j. lee, m. blaber
  
  
• 1z4s.pdb. hormone/growth factor 16-mar-05 1z4s
  Title: crystal structure of gly19 and glu60 deletion mutant of human acidic fibroblast growth factor
  Author: j. lee, m. blaber
  
  
• 1zja.pdb. isomerase 28-apr-05 1zja Ca
  Title: crystal structure of the trehalulose synthase mutb from pseudomonas mesoacidophila mx-45 (triclinic form)
  Author: s. ravaud, x. robert, r. haser, n. aghajari
  Keywords: sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel
  
• 1zjb.pdb. isomerase 28-apr-05 1zjb Ca
  Title: crystal structure of the trehalulose synthase mutb from pseudomonas mesoacidophila mx-45 (monoclinic form)
  Author: s. ravaud, x. robert, r. haser, n. aghajari
  Keywords: sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel
  
• 1zur.pdb. hydrolase 31-may-05 1zur Cl
  Title: crystal structure of spin labeled t4 lysozyme (v131r1f)
  Author: m. r. fleissner, d. cascio, m. r. sawaya, k. hideg, w. l. hubbell
  Keywords: epr, modified cysteine
  
• 1zwn.pdb. hydrolase 03-jun-05 1zwn Cl
  Title: crystal structure of spin labeled t4 lysozyme (v131r1b)
  Author: m. r. fleissner, d. cascio, m. r. sawaya, k. hideg, w. l. hubbell
  Keywords: epr, modified cysteine
  
• 2a2a.pdb. transferase 22-jun-05 2a2a Cl Na
  Title: high-resolution crystallographic analysis of the autoinhibited conformation of a human death-associated protein kinase
  Author: p. kursula, m. wilmanns
  Keywords: autoinhibition
  
• 2ahf.pdb. hydrolase 28-jul-05 2ahf
  Title: unsaturated glucuronyl hydrolase mutant d88n
  Author: t. itoh, w. hashimoto, b. mikami, k. murata
  Keywords: glycoside hydrolase family 88
  
• 2ahg.pdb. hydrolase 28-jul-05 2ahg
  Title: unsaturated glucuronyl hydrolase mutant d88n with dglca- galnac
  Author: t. itoh, w. hashimoto, b. mikami, k. murata
  Keywords: glycoside hydrolase family 88, complex with unsaturated chondroitin disaccharide
  
• 2aht.pdb. ribonucleic acid 28-jul-05 2aht (NMR, 20 structures)
  Title: solution structure of domain 6 from the ai5(gamma)group ii intron
  Author: m. c. erat, o. zerbe, t. fox, r. k. o. sigel
  Keywords: ribozyme, splicing, branching, domain 6, rna, tetraloop, branch-point a, gu wobble pairs, metal ion, magnesium, nmr
  
• 2ai6.pdb. hydrolase 29-jul-05 2ai6 (NMR, 21 structures)
  Title: solution structure of human phosphohistidine phosphatase 1
  Author: w. gong, g. cui, c. jin, b. xia
  
  
• 2aqz.pdb. hormone/growth factor 18-aug-05 2aqz
  Title: crystal structure of fgf-1, s17t/n18t/g19 deletion mutant
  Author: j. lee, m. blaber
  
  
• 2b26.pdb. chaperone/protein transport 16-sep-05 2b26
  Title: the crystal structure of the protein complex of yeast hsp40 sis1 and hsp70 ssa1
  Author: j. li, y. wu, x. qian, b. sha
  
  
• 2b4x.pdb. blood clotting 27-sep-05 2b4x
  
  Author: t. e. adams, j. a. huntington, d. j. d. johnson, s. c. bock
  
  
• 2b6m.pdb. oxidoreductase 03-oct-05 2b6m
  Title: structure of the dsba mutant (p31a-c33a)
  Author: c. vives, a. royant, l. serre
  
  
• 2b9r.pdb. cell cycle 12-oct-05 2b9r
  Title: crystal structure of human cyclin b1
  Author: r. basavappa, e. petri
  
  
• 2b9u.pdb. isomerase 13-oct-05 2b9u
  Title: crystal structure of dtdp-4-dehydrorhamnose 3,5-epimerase from sulfolobus tokodaii
  Author: v. rajakannan, k. kondo, t. mizushima, a. suzuki, t. yamane
  Keywords: jelly roll-like topology, flattened barrel
  
• 2baz.pdb. unknown function 16-oct-05 2baz
  Title: structure of yoss, a putative dutpase from bacillus subtilis
  Author: y. -h. liang, j. wang, x. -d. su
  Keywords: beta barrel
  
• 2bpi.pdb. oxidoreductase 12-oct-04 2bpi Fe
  Title: stucture of iron dependent superoxide dismutase from p. falciparum.
  Author: i. w. boucher, j. a. brannigan, a. j. wilkinson, a. m brzozowski
  Keywords: oxidoreductase, metal-binding
  
• 2c41.pdb. iron-binding/oxidation protein 13-oct-05 2c41 Cl
  Title: x-ray structure of dps from thermosynechococcus elongatus
  Author: a. ilari, s. franceschini, p. ceci, e. chiancone
  Keywords: iron binding, thermostable protein, thermophilic cyanobacterium, dna-binding protein, stress protein
  
• 2cie.pdb. flavoprotein 20-mar-06 2cie Cl Mg Na
  Title: complexes of dodecin with flavin and flavin-like ligands
  Author: m. grininger, f. seiler, k. zeth, d. oesterhelt
  
  
• 2cif.pdb. flavoprotein 20-mar-06 2cif Cl Mg Na
  Title: complexes of dodecin with flavin and flavin-like ligands
  Author: m. grininger, f. seiler, k. zeth, d. oesterhelt
  
  
• 2cjc.pdb. flavoprotein 31-mar-06 2cjc Cl Mg Na
  Title: complexes of dodecin with flavin and flavin-like ligands
  Author: m. grininger, f. seiler, k. zeth, d. oesterhelt
  
  
• 2ck3.pdb. hydrolase 10-apr-06 2ck3 Mg
  Title: azide inhibited bovine f1-atpase
  Author: m. w. bowler, m. g. montgomery, a. g. w. leslie, j. e. walker
  Keywords: atp phosphorylase (h+ transporting), atp synthase, f1fo atp synthase, f1-atpase, hydrolase, atp synthesis, atp-binding, azide
  
• 2cnw.pdb. signal recognition 24-may-06 2cnw Mg F Al
  Title: gdpalf4 complex of the srp gtpases ffh and ftsy
  Author: p. j. focia, j. gawronski-salerno, j. s. coon v, d. m. freymann
  Keywords: cell cycle, cell division/complex, signal recognition
  
• 2d3y.pdb. hydrolase 04-oct-05 2d3y Fe
  Title: crystal structure of uracil-dna glycosylase from thermus thermophilus hb8
  Author: h. kosaka, n. nakagawa, r. masui, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: rsgi
  
• 2d49.pdb. hydrolase 11-oct-05 2d49 (NMR, 30 structures)
  Title: solution structure of the chitin-binding domain of streptomyces griseus chitinase c
  Author: k. akagi, j. watanabe, m. hara, y. kezuka, e. chikaishi, t. yamaguchi, h. akutsu, t. nonaka, t. watanabe, t. ikegami
  Keywords: chitin binding domain, chbd
  
• 2d4g.pdb. structural genomics, unknown function 19-oct-05 2d4g Se
  Title: structure of yjcg protein, a putative 2'-5' rna ligase from bacillus subtilis
  Author: d. li, y. -h. liang, x. -d. su
  Keywords: alpha helix, structural genomics
  
• 2d5j.pdb. hydrolase 02-nov-05 2d5j
  Title: unsaturated glucuronyl hydrolase triggers hydration of vinyl ether group but not of glycosidic bond
  Author: t. itoh, w. hashimoto, b. mikami, k. murata
  Keywords: unsaturated glucuronyl hydrolase
  
• 2d5k.pdb. metal binding protein 02-nov-05 2d5k
  Title: crystal structure of dps from staphylococcus aureus
  Author: y. tanaka, m. yao, n. watanabe, i. tanaka
  
  
• 2d5w.pdb. peptide binding protein 07-nov-05 2d5w
  Title: the crystal structure of oligopeptide binding protein from thermus thermophilus hb8 complexed with pentapeptide
  Author: a. morita
  
  
• 2dcp.pdb. unknown function 12-jan-06 2dcp (NMR, 20 structures)
  Title: fully automated nmr structure determination of the enth-vhs domain at3g16270 from arabidopsis thaliana
  Author: b. lopez-mendez, p. guntert
  
  
• 2dcq.pdb. unknown function 12-jan-06 2dcq (NMR, 20 structures)
  Title: fully automated nmr structure determination of the rhodanese homology domain at4g01050(175-295) from arabidopsis thaliana
  Author: b. lopez-mendez, p. guntert
  Keywords: fully automated structure determination, flya algorithm
  
• 2dcr.pdb. transferase 12-jan-06 2dcr (NMR, 20 structures)
  Title: fully automated solution structure determination of the fes sh2 domain
  Author: b. lopez-mendez, p. guntert
  Keywords: fes, feline sarcoma oncogene, fully automated structure determination, flya algorithm
  
• 2dkg.pdb. ligase 11-apr-06 2dkg Mg
  Title: crystal structure of biotin protein ligase from pyrococcus horikoshii ot3 in complex with biotinyl-5'-amp, pyrophosphate and mg(2+)
  Author: b. bagautdinov, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: dimer, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dkl.pdb. signaling protein 12-apr-06 2dkl (NMR, 20 structures)
  Title: solution structure of the uba domain in the human trinucleotide repeat containing 6c protein (htnrc6c)
  Author: c. zhao, t. kigawa, m. yoneyama, s. koshiba, t. harada, s. watanabe, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: tnrc6c, kiaa1582 protein, uba domain, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dkm.pdb. signaling protein 12-apr-06 2dkm (NMR, 20 structures)
  Title: solution structures of the fn3 domain of human collagen alpha-1(xx) chain
  Author: m. sato, k. saito, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: kiaa1510, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dkp.pdb. signaling protein 13-apr-06 2dkp (NMR, 20 structures)
  Title: solution structure of the ph domain of pleckstrin homology domain-containing protein family a member 5 from human
  Author: h. li, t. tomizawa, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi
  
• 2dkq.pdb. signaling protein 13-apr-06 2dkq (NMR, 20 structures)
  Title: solution structure of the ptb domain of kiaa1075 protein from human
  Author: h. li, n. tochio, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: kiaa1075 protein, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dkr.pdb. protein transport 14-apr-06 2dkr (NMR, 20 structures)
  Title: solution structure of the pdz domain from human lin-7 homolog b
  Author: t. suetake, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: pdz, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dkt.pdb. metal binding protein 14-apr-06 2dkt Zn (NMR, 20 structures)
  Title: solution structure of the chy zinc finger domain of the ring finger and chy zinc finger domain-containing protein 1 from mus musculus
  Author: k. miyamoto, t. kigawa, s. koshiba, m. inoue, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: rchy1, chy zinc finger domain, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dku.pdb. contractile protein 14-apr-06 2dku (NMR, 20 structures)
  Title: solution structure of the third ig-like domain of human kiaa1556 protein
  Author: k. nagashima, c. kurosaki, m. yoshida, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: ig-fold, obscurin, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dkw.pdb. gene regulation 14-apr-06 2dkw (NMR, 20 structures)
  Title: solution structure of the bromodomain of human protein kiaa1240
  Author: r. sano, f. hayashi, c. kurosaki, m. yoshida, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: five-helix, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dkx.pdb. signaling protein 14-apr-06 2dkx (NMR, 20 structures)
  Title: solution structure of the sam_pnt-domain of ets transcription factor pdef (prostate ets)
  Author: a. k. goroncy, m. sato, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: protein regulation, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dkz.pdb. signaling protein 14-apr-06 2dkz (NMR, 20 structures)
  Title: solution structure of the sam_pnt-domain of the hypothetical protein loc64762
  Author: a. k. goroncy, m. sato, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: protein regulation, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dl0.pdb. signaling protein 14-apr-06 2dl0 (NMR, 20 structures)
  Title: solution structure of the sam-domain of the sam and sh3 domain containing protein 1
  Author: a. k. goroncy, m. sato, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: protein regulation, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dl1.pdb. protein transport 14-apr-06 2dl1 (NMR, 20 structures)
  Title: solution structure of the mit domain from human spartin
  Author: t. suetake, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: spg20, mit, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dl3.pdb. cell adhesion, signaling protein 17-apr-06 2dl3 (NMR, 20 structures)
  Title: solution structure of the first sh3 domain of human sorbin and sh3 domain-containing protein 1
  Author: x. r. qin, t. nagashima, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dl4.pdb. signaling protein 17-apr-06 2dl4 (NMR, 20 structures)
  Title: solution structure of the first sh3 domain of stac protein
  Author: x. r. qin, t. suetake, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: rsgi
  
• 2dl5.pdb. structural genomics, unknown function 17-apr-06 2dl5 (NMR, 20 structures)
  Title: solution structure of the first sh3 domain of human kiaa0769 protein
  Author: x. r. qin, k. izumi, m. yoshida, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: kiaa0769, fchsd2, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dl6.pdb. gene regulation 17-apr-06 2dl6 (NMR, 20 structures)
  Title: solution structure of the first brk domain from human chromodomain-helicase-dna-binding protein 8
  Author: t. suetake, t. nagashima, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: chd8, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dl7.pdb. structural genomics, unknown function 17-apr-06 2dl7 (NMR, 20 structures)
  Title: solution structure of the second sh3 domain of human kiaa0769 protein
  Author: x. r. qin, c. kurosaki, m. yoshida, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: kiaa0769, fchsd2, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dl8.pdb. signaling protein 17-apr-06 2dl8 (NMR, 20 structures)
  Title: solution structure of the sh3 domain of human slit-robo rho gtpase-activating protein 2
  Author: x. r. qin, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi
  
• 2dl9.pdb. membrane protein 17-apr-06 2dl9 (NMR, 20 structures)
  Title: solution structure of the ig-like domain of human leucine- rich repeat-containing protein 4
  Author: x. r. qin, t. nagashima, f. hayashi, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi
  
• 2dm5.pdb. transport protein 20-apr-06 2dm5 Cd
  Title: thermodynamic penalty arising from burial of a ligand polar group within a hydrophobic pocket of a protein receptor
  Author: e. barratt, a. bronowska, j. vondrasek, r. bingham, s. phillips, s. w. homans
  Keywords: lipocalin
  
• 2dux.pdb. oxidoreductase 27-jul-06 2dux F
  Title: crystal structure of human aldose reductase complexed with zopolrestat after 3 days soaking (3days_soaked_1)
  Author: h. steuber, a. heine, g. klebe
  
  
• 2duz.pdb. oxidoreductase 27-jul-06 2duz F
  Title: human aldose reductase complexed with inhibitor zopolrestat after 3 days soaking (3days_soaked_2)
  Author: h. steuber, a. heine, g. klebe
  
  
• 2dv0.pdb. oxidoreductase 28-jul-06 2dv0 F
  Title: human aldose reductase complexed with zopolrestat after 6 days soaking(6days_soaked_2)
  Author: h. steuber, a. heine, g. klebe
  
  
• 2dw5.pdb. hydrolase 04-aug-06 2dw5 Ca
  Title: crystal structure of human peptidylarginine deiminase 4 in complex with n-alpha-benzoyl-n5-(2-fluoro-1-iminoethyl)-l- ornithine amide
  Author: y. luo, k. arita, m. sato, p. r. thompson
  
  
• 2esc.pdb. signaling protein 26-oct-05 2esc
  Title: crystal structure of a 40 kda protective signalling protein from bovine (spc-40) at 2.1 a resolution
  Author: j. kumar, a. s. ethayathulla, d. b. srivastav, s. sharma, a. srinivasan, t. p. singh
  Keywords: crystal structure,
  
• 2ewl.pdb. oncoprotein, virus/viral protein 04-nov-05 2ewl Zn (NMR, 15 structures)
  Title: solution structure of the c-terminal domain (monomer) of the hpv45 oncoprotein e7
  Author: o. ohlenschlager, m. gorlach
  Keywords: hpv, oncoprotein, zinc binding
  
• 2exg.pdb. cell adhesion 08-nov-05 2exg F (NMR, 20 structures)
  Title: making protein-protein interactions drugable: discovery of low-molecular-weight ligands for the af6 pdz domain
  Author: m. joshi, c. vargas, p. boisguerin, g. krause, m. schade, h. oschkinat
  Keywords: low-molecular- weight ligands, protein structure, nmr screening, pdz domains
  
• 2f3a.pdb. antimicrobial protein 19-nov-05 2f3a (NMR, 5 structures)
  Title: solution structure of the ll-37-derived aurein 1.2 analog (llaa) in membrane-mimetic micelles
  Author: g. wang, x. li, y. li, a. peterkofsky
  
  
• 2faz.pdb. ligase 08-dec-05 2faz
  Title: ubiquitin-like domain of human nuclear zinc finger protein np95
  Author: j. r. walker, l. groot-wybenga, r. s. doherty, p. j. finerty jr. , e. newman, f. m. mackenzie, j. weigelt, m. sundstrom, c. arrowsmith, a. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
  Keywords: sgc
  
• 2fbo.pdb. immune system 09-dec-05 2fbo
  Title: crystal structure of the two tandem v-type regions of vcbp3 (v-region-containing chitin binding protein) to 1.85 a
  Author: j. a. hernandez prada, r. n. haire, j. jakoncic, j. p. cannon, g. w. litman, d. a. ostrov
  
  
• 2fhs.pdb. oxidoreductase/biosynthetic protein 27-dec-05 2fhs
  Title: structure of acyl carrier protein bound to fabi, the enoyl reductase from escherichia coli
  Author: s. kolappan, p. novichenok, s. rafi, c. simmerling, p. j. tonge, c. kisker
  
  
• 2ftn.pdb. transferase 24-jan-06 2ftn
  Title: e. coli thymidylate synthase y94f mutant
  Author: w. r. montfort, s. a. roberts
  
  
• 2fto.pdb. transferase 24-jan-06 2fto
  Title: y94f mutant of thymidylate synthase bound to thymidine-5'- phosphate and 10-propargyl-5,8-dideazafolid acid
  Author: s. a. roberts, w. r. montfort
  
  
• 2fup.pdb. structural genomics, unknown function 27-jan-06 2fup Se
  Title: crystal structure of a hypothetical protein (np_252042.1) from pseudomonas aeruginosa at 1.48 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: structural genomics, psi, protein structure initiative, joint center for structural genomics, jcsg
  
• 2g4d.pdb. hydrolase/protein binding 22-feb-06 2g4d
  Title: crystal structure of human senp1 mutant (c603s) in complex with sumo-1
  Author: z. xu, s. f. chau, k. h. lam, s. w. n. au
  Keywords: ubiquitin-like protein, sumo maturation, sumo deconjugation
  
• 2g6x.pdb. luminescent protein 26-feb-06 2g6x
  Title: crystal structure of a novel green fluorescent protein from marine copepod pontellina plumata
  Author: a. g. evdokimov, m. e. pokross, d. m. chudakov
  Keywords: natural chromophore, rapid maturation, beta can
  
• 2g6y.pdb. luminescent protein 26-feb-06 2g6y
  Title: crystal structure of the novel green fluorescent protein from marine copepod pontellina plumata
  Author: a. g. evdokimov, m. e. pokross, d. m. chudakov
  Keywords: natural chromophore, rapid maturation, beta-can
  
• 2ge5.pdb. hydrolase/dna 17-mar-06 2ge5 Ca
  Title: ecorv restriction endonuclease c-terminal deletion mutant/gatatc/ca2+
  Author: d. a. hiller, j. j. perona
  
  
• 2gee.pdb. protein binding, oncoprotein 19-mar-06 2gee
  Title: crystal structure of human type iii fibronectin extradomain b and domain 8
  Author: s. bencharit, c. -b. cui, a. siddiqui, e. l. howard-williams, i. aukhil
  Keywords: eiiib, cancer, neovascularization, cell adhesion
  
• 2gjh.pdb. de novo protein 30-mar-06 2gjh (NMR, 20 structures)
  Title: nmr structure of cfr (c-terminal fragment of computationally designed novel-topology protein top7)
  Author: g. dantas
  
  
• 2gmh.pdb. oxidoreductase 06-apr-06 2gmh Na Fe
  Title: structure of porcine electron transfer flavoprotein- ubiquinone oxidoreductase in complexed with ubiquinone
  Author: j. zhang, f. e. frerman, j. -j. p. kim
  Keywords: oxidoreductase, flavoprotein, ubiquinone
  
• 2gmj.pdb. oxidoreductase 06-apr-06 2gmj Fe
  Title: structure of porcine electron transfer flavoprotein- ubiquinone oxidoreductase
  Author: j. zhang, f. e. frerman, j. -j. p. kim
  Keywords: flavoprotein, oxidoreductase, ubiquinone
  
• 2gou.pdb. oxidoreductase 14-apr-06 2gou
  Title: structure of wild type, oxidized sye1, an oye homologue from s. oneidensis
  Author: s. n. savvides, d. van den hemel
  Keywords: flavoenzyme, fmn
  
• 2gq8.pdb. oxidoreductase 20-apr-06 2gq8
  Title: structure of sye1, an oye homologue from s. ondeidensis, in complex with p-hydroxyacetophenone
  Author: s. n. savvides, d. van den hemel
  Keywords: flavoenzyme, fmn, phenolic ligands
  
• 2gq9.pdb. oxidoreductase 20-apr-06 2gq9
  Title: structure of sye1, an oye homologue from s. oneidensis, in complex with p-hydroxybenzaldehyde
  Author: s. n. savvides, d. van den hemel
  Keywords: flavoenzyme, fmn, phenolic ligands
  
• 2gqa.pdb. oxidoreductase 20-apr-06 2gqa
  Title: structure of nadh-reduced sye1, an oye homologue from s. oneidensis
  Author: s. n. savvides, d. van den hemel
  Keywords: flavoenzyme, fmn, reduction by nadh
  
• 2gs4.pdb. metal binding protein 25-apr-06 2gs4 Se
  Title: the crystal structure of the e.coli stress protein ycif.
  Author: a. hindupur, d. liu, y. zhao, h. d. bellamy, m. a. white, r. o. fox
  Keywords: rubrerythrin
  
• 2guz.pdb. chaperone, protein transport 02-may-06 2guz
  Title: structure of the tim14-tim16 complex of the mitochondrial protein import motor
  Author: d. mokranjac, g. bourenkov, k. hell, w. neupert, m. groll
  
  
• 2h24.pdb. cytokine 18-may-06 2h24
  Title: crystal structure of human il-10
  Author: s. i. yoon, m. r. walter
  
  
• 2h3e.pdb. transferase 22-may-06 2h3e Zn
  Title: structure of wild-type e. coli aspartate transcarbamoylase in the presence of n-phosphonacetyl-l-isoasparagine at 2.3a resolution
  Author: j. eldo, j. p. cardia, e. m. o'day, j. xia, h. tsuruta, e. r. kantrowitz
  Keywords: cooperativity
  
• 2h5s.pdb. hydrolase 27-may-06 2h5s
  Title: sa2-13 penam sulfone complexed to wt shv-1 beta-lactamase
  Author: f. van den akker, p. s. padayatti
  Keywords: drug design
  
• 2haj.pdb. transferase 13-jun-06 2haj (NMR, 20 structures)
  Title: solution structure of the helicase-binding domain of escherichia coli primase
  Author: x. c. su, k. v. loscha, n. e. dixon, g. otting
  Keywords: helicase, primase, helix
  
• 2het.pdb. metal binding protein 22-jun-06 2het Ca
  Title: non-myristoylated bovine recoverin (truncated at c- terminus) with calcium bound to ef-hand 3
  Author: o. h. weiergraber, j. granzin
  Keywords: ef-hand, helix-loop-helix, calcium binding
  
• 2hfp.pdb. transcription 25-jun-06 2hfp F
  Title: crystal structure of ppar gamma with n-sulfonyl-2-indole carboxamide ligands
  Author: m. e. pokross, a. g. evdokimov, r. l. walter, m. j. mekel, c. r. hopkins
  
  
• 2hmf.pdb. transferase 11-jul-06 2hmf Mg
  Title: structure of a threonine sensitive aspartokinase from methanococcus jannaschii complexed with mg-adp and aspartate
  Author: c. r. faehnle, r. e. viola
  
  
• 2hr5.pdb. metal binding protein 19-jul-06 2hr5 Fe
  Title: pf1283- ruberythrin from pyrococcus furiosus iron bound form
  Author: b. d. dillard, j. r. ruble, l. chen, z. j. liu, f. e. jenney jr. , m. w. w. adams, j. p. rose, , b. c. wang, southeast collaboratory for structural genomics (secsg)
  Keywords: pfu-1210814, ruberythrin, pyrococcus furiosus, structural genomics, psi, protein structure initiative, southeast collaboratory for structural genomics, secsg
  
• 2htr.pdb. hydrolase 26-jul-06 2htr
  Title: n8 neuraminidase in complex with dana
  Author: r. j. russell, l. f. haire, d. j. stevens, p. j. collins, y. p. lin, g. m. blackburn, a. j. hay, s. j. gamblin, j. j. skehel
  Keywords: neuraminidase, dana
  
• 2hty.pdb. hydrolase 26-jul-06 2hty Ca
  Title: n1 neuraminidase
  Author: r. j. russell, l. f. haire, d. j. stevens, p. j. collins, y. p. lin, g. m. blackburn, a. j. hay, s. j. gamblin, j. j. skehel
  Keywords: neuraminidase
  
• 2hu0.pdb. hydrolase 26-jul-06 2hu0
  Title: n1 neuraminidase in complex with oseltamivir 1
  Author: r. j. russell, l. f. haire, d. j. stevens, p. j. collins, y. p. lin, g. m. blackburn, a. j. hay, s. j. gamblin, j. j. skehel
  Keywords: neuraminidase, oseltamivir
  
• 2hu4.pdb. hydrolase 26-jul-06 2hu4
  Title: n1 neuraminidase in complex with oseltamivir 2
  Author: r. j. russell, l. f. haire, d. j. stevens, p. j. collins, y. p. lin, g. m. blackburn, a. j. hay, s. j. gamblin, j. j. skehel
  Keywords: neuraminidase, oseltamivir
  
• 2huk.pdb. hydrolase 26-jul-06 2huk
  Title: crystal structure of t4 lysozyme v131c synthetic dimer
  Author: d. r. banatao, d. cascio, t. o. yeates
  
  
• 2hul.pdb. hydrolase 26-jul-06 2hul
  Title: crystal structure of t4 lysozyme s44c synthetic dimer
  Author: d. r. banatao, d. cascio, t. o. yeates
  
  
• 2hum.pdb. hydrolase 26-jul-06 2hum
  Title: crystal structure of t4 lysozyme d72c synthetic dimer
  Author: d. r. banatao, d. cascio, t. o. yeates
  
  
• 2hvq.pdb. ligase 30-jul-06 2hvq Mg
  Title: structure of adenylated full-length t4 rna ligase 2
  Author: j. nandakumar, c. d. lima
  Keywords: ligase, lysine adenylate, t4
  
• 2hvr.pdb. ligase/rna/dna 30-jul-06 2hvr
  Title: structure of t4 rna ligase 2 with nicked 5'-adenylated nucleic acid duplex containing a 3'-deoxyribonucleotide at the nick
  Author: j. nandakumar, c. d. lima
  Keywords: ligase, lysine adenylate, t4, protein dna/rna complex
  
• 2hvs.pdb. ligase/dna/rna 30-jul-06 2hvs
  Title: structure of t4 rna ligase 2 with nicked 5'-adenylated nucleic acid duplex containing a 2'-deoxyribonucleotide at the nick
  Author: j. nandakumar, c. d. lima
  Keywords: ligase, lysine adenylate, t4, protein dna/rna complex
  
• 2hzm.pdb. transcription 09-aug-06 2hzm
  Title: structure of the mediator head subcomplex med18/20
  Author: l. lariviere, s. geiger, s. hoeppner, s. rother, k. straesser, p. cramer
  Keywords: channel
  
• 2i0h.pdb. transferase 10-aug-06 2i0h Cl F
  Title: the structure of p38alpha in complex with an arylpyridazinone
  Author: s. r. natarajan, s. t. heller, k. nam, s. b. singh, g. scapin, s. patel, j. e. thompson, c. e. fitzgerald, s. j. o'keefe
  Keywords: inhibitor design
  
• 2i13.pdb. dna binding protein/dna 12-aug-06 2i13 Zn
  Title: aart, a six finger zinc finger designed to recognize ann triplets
  Author: n. c. horton, d. j. segal, m. bhakta, j. w. crotty, c. f. barbas iii
  Keywords: zinc finger
  
• 2i19.pdb. transferase 13-aug-06 2i19 Mg
  Title: t. brucei farnesyl diphosphate synthase complexed with bisphosphonate
  Author: r. cao, j. mao, y. gao, h. robinson, s. odeh, a. goddard, e. oldfield
  
  
• 2i2h.pdb. signaling protein 16-aug-06 2i2h (NMR, 22 structures)
  Title: nmr structure of tpc3 in tfe
  Author: r. t. syvitski, d. l. jakeman, y. li
  
  
• 2i2j.pdb. signaling protein 16-aug-06 2i2j (NMR, 34 structures)
  Title: nmr structure of ua159sp in tfe
  Author: r. t. syvitski, d. l. jakeman, y. li
  
  
• 2i2q.pdb. actin-binding protein 16-aug-06 2i2q
  Title: fission yeast cofilin
  Author: e. andrianantoandro, t. d. pollard
  
  
• 2i35.pdb. membrane protein 17-aug-06 2i35
  Title: crystal structure of rhombohedral crystal form of ground- state rhodopsin
  Author: r. e. stenkamp, i. le trong, d. t. lodowski, d. salom, k. palczewski
  
  
• 2i36.pdb. membrane protein 17-aug-06 2i36
  Title: crystal structure of trigonal crystal form of ground-state rhodopsin
  Author: r. e. stenkamp, i. le trong, d. t. lodowski, d. salom, k. palczewski
  
  
• 2i37.pdb. membrane protein 17-aug-06 2i37
  Title: crystal structure of a photoactivated rhodopsin
  Author: d. t. lodowski, r. e. stenkamp, d. salom, i. le trong, k. palczewski
  Keywords: gpcr
  
• 2i3v.pdb. membrane protein 21-aug-06 2i3v Zn
  Title: measurement of conformational changes accompanying desensitization in an ionotropic glutamate receptor: structure of g725c mutant
  Author: n. armstrong, j. jasti, m. beich-frandsen, e. gouaux
  
  
• 2i3w.pdb. membrane protein 21-aug-06 2i3w
  Title: measurement of conformational changes accompanying desensitization in an ionotropic glutamate receptor: structure of s729c mutant
  Author: n. armstrong, j. jasti, m. beich-frandsen, e. gouaux
  
  
• 2i4s.pdb. protein transport, membrane protein 22-aug-06 2i4s Se
  Title: pdz domain of epsc from vibrio cholerae, residues 204-305
  Author: k. v. korotkov, b. krumm, m. bagdasarian, w. g. j. hol
  Keywords: gspc, pdz domain, type 2 secretion system, general secretion pathway
  
• 2i5w.pdb. hydrolase, lyase/dna 26-aug-06 2i5w Ca
  Title: structure of hogg1 crosslinked to dna sampling a normal g adjacent to an oxog
  Author: a. banerjee, g. l. verdine
  Keywords: protein-dna complex, dna glycosylase
  
• 2i6d.pdb. transferase 28-aug-06 2i6d Se
  Title: the structure of a putative rna methyltransferase of the trmh family from porphyromonas gingivalis.
  Author: m. e. cuff, k. e. mussar, h. li, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: trmh family, stuctural genomics, porphyromonas gingivalis, knot, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2i6q.pdb. hydrolase 29-aug-06 2i6q Mn
  Title: complement component c2a
  Author: f. j. milder, h. c. a. raaijmakers, d. a. a. vandeputte, a. schouten, e. g. huizinga, r. a. romijn, w. hemrika, a. roos, m. r. daha, p. gros
  Keywords: von willebrand factor-a domain
  
• 2i6s.pdb. hydrolase 29-aug-06 2i6s
  Title: complement component c2a
  Author: f. j. milder, h. c. a. raaijmakers, d. a. a. vandeputte, a. schouten, e. g. huizinga, r. a. romijn, w. hemrika, a. roos, m. r. daha, p. gros
  Keywords: von willebrand factor-a domain
  
• 2i6v.pdb. protein transport, membrane protein 29-aug-06 2i6v
  Title: pdz domain of epsc from vibrio cholerae, residues 219-305
  Author: k. v. korotkov, b. krumm, m. bagdasarian, w. g. j. hol
  Keywords: gspc, pdz domain, type 2 secretion system, general secretion pathway
  
• 2i75.pdb. hydrolase 30-aug-06 2i75
  Title: crystal structure of human protein tyrosine phosphatase n4 (ptpn4)
  Author: e. ugochukwu, a. barr, p. savitsky, n. burgess, s. das, a. turnbull, f. von delft, m. sundstrom, a. edwards, c. arrowsmith, j. weigelt, s. knapp, structural genomics consortium (sgc)
  Keywords: ptp, tyrosine phosphatase, meg-1, structural genomics, structural genomics consortium, sgc
  
• 2i7r.pdb. structural genomics, unknown function 31-aug-06 2i7r Se
  Title: conserved domain protein
  Author: n. e. c. duke, m. zhou, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2i91.pdb. rna binding protein/rna 04-sep-06 2i91 Mg
  Title: 60kda ro autoantigen in complex with a fragment of misfolded rna
  Author: k. m. reinisch, a. j. stein
  Keywords: rossmann-fold, heat repeat, midas motif
  
• 2i9d.pdb. transferase 05-sep-06 2i9d Se
  Title: chloramphenicol acetyltransferase
  Author: n. e. c. duke, h. li, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi- 2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2ia9.pdb. structural genomics, unknown function 07-sep-06 2ia9 Se
  Title: structural genomics, the crystal structure of spovg from bacillus subtilis subsp. subtilis str. 168
  Author: k. tan, m. borovilos, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: spovg, bacillus subtilis subsp. subtilis str. 168, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2ibn.pdb. oxidoreductase 11-sep-06 2ibn Fe Se
  Title: crystal structure of human myo-inositol oxygenase (miox)
  Author: b. m. hallberg, r. d. busam, c. arrowsmith, h. berglund, r. collins, a. edwards, m. ehn, s. flodin, a. flores, s. graslund, m. hammarstrom, m. hogbom, l. holmberg-schiavone, i. johansson, t. karlberg, t. kotenyova, p. nilsson-ehle, p. nordlund, t. nyman, d. ogg, j. sagemark, p. stenmark, m. sundstrom, j. uppenberg, s. van den berg, j. weigelt, a. g. thorsell, c. persson, structural genomics consortium (sgc)
  Keywords: inositol, diiron, structural genomics, structural genomics consortium, sgc
  
• 2ic8.pdb. membrane protein 12-sep-06 2ic8
  Title: crystal structure of glpg
  Author: y. ha
  Keywords: intramembrane proteolysis, membrane protein
  
• 2ics.pdb. hydrolase 13-sep-06 2ics Zn Se
  Title: crystal structure of an adenine deaminase
  Author: r. sugadev, d. kumaran, s. k. burley, s. swaminathan, new york structural genomics research consortium (nysgrc)
  Keywords: binuclear zinc, adenine complex, amidohydrolase, 9295a, adenine deaminase, structural genomics, psi, protein structure initiative, new york structural genomics research consortium, nysgrc
  
• 2id0.pdb. hydrolase 13-sep-06 2id0 Mn Se
  Title: escherichia coli rnase ii
  Author: y. zuo, j. zhang, y. wang, a. malhotra
  Keywords: exoribonuclease, ribonuclease, exonuclease, nuclease, hydrolyase, mrna decay, rnr family
  
• 2id3.pdb. transcription 14-sep-06 2id3 Cl Ca Se
  Title: crystal structure of transcriptional regulator sco5951 from streptomyces coelicolor a3(2)
  Author: m. grabowski, m. chruszcz, k. koclega, m. cymborowski, j. gu, x. xu, a. savchenko, a. edwards, w. minor, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2idl.pdb. structural genomics, unknown function 15-sep-06 2idl Na
  Title: crystal structure of conserved hypothetical protein from streptococcus pneumoniae tigr4
  Author: b. nocek, r. wu, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: mcsg,psi2,mad,structural genomics, protein structure initiative, midwest center for structural genomics
  
• 2if7.pdb. immune system 20-sep-06 2if7 Cl Ca
  Title: crystal structure of ntb-a
  Author: e. cao, u. a. ramagopal, a. a. fedorov, e. v. fedorov, s. g. nathenson, s. c. almo
  Keywords: slam6, ly108, homophilic receptor
  
• 2ihi.pdb. transferase 26-sep-06 2ihi
  Title: crystal structure of plasmodium vivax putative farnesyl pyrophosphate synthase (pv092040)
  Author: a. dong, j. dunford, j. lew, a. k. wernimont, h. ren, y. zhao, i. koeieradzki, u. opperman, m. sundstrom, j. weigelt, a. m. edwards, c. h. arrowsmith, a. bochkarev, r. hui, j. d. artz, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc
  
• 2iiu.pdb. structural genomics/unknown function 28-sep-06 2iiu Se
  Title: crystal structure of conserved hypothetical protein (np_719307.1) from shewanella oneidensis mr-1 at 2.28 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: conserved hypothetical protein, structural genomics, psi-2, protein structure initiative, joint center for structural genomics, jcsg
  
• 2ij9.pdb. transferase 29-sep-06 2ij9
  Title: crystal structure of uridylate kinase from archaeoglobus fulgidus
  Author: y. patskovsky, r. chen, l. j. keefe, j. m. sauder, m. dickey, j. m. adams, s. ozyurt, s. r. wasserman, s. k. burley, s. c. almo, new york structural genomics research consortium (nysgrc)
  Keywords: structural genomics, protein structure initiative, psi, nysgrc, new york structural genomics research consortium structural genomics
  
• 2ikc.pdb. oxidoreductase 02-oct-06 2ikc Fe Ca
  Title: crystal structure of sheep lactoperoxidase at 3.25 a resolution reveals the binding sites for formate
  Author: i. a. sheikh, n. singh, a. k. singh, s. sharma, t. p. singh
  Keywords: formate, heme
  
• 2il4.pdb. transferase 02-oct-06 2il4
  Title: crystal structure of at1g77540-coenzyme a complex
  Author: e. bitto, g. e. wesenberg, g. n. phillips jr. , c. a. bingman, center for eukaryotic structural genomics (cesg)
  Keywords: coenzyme-a, cog2388 family, acetyltransferase, at1g77540, structural genomics functional follow-up study, protein structure initiative, psi, center for eukaryotic structural genomics, cesg
  
• 2im8.pdb. structural genomics, unknown function 03-oct-06 2im8 Se
  Title: x-ray structure of hypothetical protein yppe. northeast structural genomics consortium target sr213.
  Author: a. p. kuzin, h. neely, j. seetharaman, r. shastry, h. janjua, k. cunningham, l. c. ma, r. xiao, j. liu, m. c. baran, t. b. acton, b. rost, g. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: sr213, yppe, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2im9.pdb. structural genomics, unknown function 04-oct-06 2im9
  Title: crystal structure of hypothetical protein from legionella pneumophila subsp. pneumophila str. philadelphia 1
  Author: j. b. bonanno, j. freeman, k. t. bain, a. powell, s. ozyurt, s. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: hypothetical protein, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2img.pdb. hydrolase 04-oct-06 2img Se
  Title: crystal structure of dual specificity protein phosphatase 23 from homo sapiens in complex with ligand malate ion
  Author: r. agarwal, s. k. burley, s. swaminathan, new york structural genomics research consortium (nysgrc)
  Keywords: vhz, ldp-3, dual specicity protein phosphatase 23, dus23_human, malate, 8673a, structural genomics, psi, protein structure initiative, new york structural genomics research consortium, nysgrc
  
• 2imh.pdb. structural genomics, unknown function 04-oct-06 2imh Se
  Title: crystal structure of hypothetical protein from silicibacter pomeroyi
  Author: j. b. bonanno, m. dickey, k. t. bain, a. slocombe, s. ozyurt, s. wasserman, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: unknown function, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2iml.pdb. flavoprotein 04-oct-06 2iml Se
  Title: crystal structure of a hypothetical protein from archaeoglobus fulgidus binding riboflavin 5'-phosphate
  Author: j. b. bonanno, m. dickey, k. t. bain, j. adams, s. ozyurt, s. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: psi-2, structural genomics, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2imo.pdb. hydrolase 04-oct-06 2imo Se
  Title: crystal structure of allantoate amidohydrolase from escherichia coli at ph 4.6
  Author: r. agarwal, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
  Keywords: apoenzyme, allc, t1507, structural genomics, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2imr.pdb. structural genomics, unknown function 04-oct-06 2imr Zn
  Title: crystal structure of hypothetical protein dr_0824 from deinococcus radiodurans
  Author: s. eswaramoorthy, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
  Keywords: nysgxrc, psi2, 9256a, structural genomics, protein structure initiative, new york structural genomix research consortium
  
• 2iuj.pdb. oxidoreductase 05-jun-06 2iuj Fe
  Title: crystal structure of soybean lipoxygenase-b
  Author: b. youn, g. e. sellhorn, r. j. mirchel, b. j. gaffney, h. d. grimes, c. kang
  Keywords: metal-binding, oxidoreductase, soybean lipoxygenase-b, fatty acid biosynthesis, lipid synthesis
  
• 2iuk.pdb. oxidoreductase 05-jun-06 2iuk Fe
  Title: crystal structure of soybean lipoxygenase-d
  Author: b. youn, g. e. sellhorn, r. j. mirchel, b. j. gaffney, h. d. grimes, c. kang
  Keywords: dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-d, fatty acid biosynthesis, lipid synthesis
  
• 2iuy.pdb. transferase 08-jun-06 2iuy Se
  Title: crystal structure of avigt4, a glycosyltransferase involved in avilamycin a biosynthesis
  Author: c. martinez-fleites, m. proctor, s. roberts, d. n. bolam, h. j. gilbert, g. j. davies
  Keywords: transferase, antibiotics, family gt-4, avilamycin a
  
• 2iv3.pdb. transferase 08-jun-06 2iv3
  Title: crystal structure of avigt4, a glycosyltransferase involved in avilamycin a biosynthesis
  Author: c. martinez-fleites, m. proctor, s. roberts, d. n. bolam, h. j. gilbert, g. j. davies
  Keywords: transferase, antibiotics, family gt-4, avilamycin a
  
• 2iv7.pdb. transferase 08-jun-06 2iv7 Se
  Title: crystal structure of waag, a glycosyltransferase involved in lipopolysaccharide biosynthesis
  Author: c. martinez-fleites, m. proctor, s. roberts, d. n. bolam, h. j. gilbert, g. j. davies
  Keywords: lps, transferase, family gt-4, glycosyltransferase
  
• 2iw1.pdb. transferase 23-jun-06 2iw1 F
  Title: crystal structure of waag, a glycosyltransferase involved in lipopolysaccharide biosynthesis
  Author: c. martinez-fleites, m. proctor, s. roberts, d. n. bolam, h. j. gilbert, g. j. davies
  Keywords: family gt-4, glycosyltransferase, lps, retaining, udp-glucose, transferase
  
• 2iw3.pdb. translation 26-jun-06 2iw3 Se
  Title: elongation factor 3 in complex with adp
  Author: c. b. f. andersen, t. becker, m. blau, m. anand, m. halic, b. balar, t. mielke, t. boesen, j. s. pedersen, c. m. t. spahn, t. g. kinzy, g. r. andersen, r. beckmann
  Keywords: atp-binding, elongation factor, protein biosynthesis, nucleotide-binding, phosphorylation, rna-binding, rrna-binding, translation
  
• 2iwh.pdb. translation 30-jun-06 2iwh
  Title: structure of yeast elongation factor 3 in complex with adpnp
  Author: c. b. f. andersen, t. becker, m. blau, m. anand, m. halic, b. balar, t. mielke, t. boesen, j. s. pedersen, c. m. t. spahn, t. g. kinzy, g. r. andersen, r. beckmann
  Keywords: translation, phosphorylation, elongation factor, nucleotide-binding, rna-binding, acetylation, atp-binding, rrna-binding
  
• 2ix3.pdb. translation 06-jul-06 2ix3
  Title: structure of yeast elongation factor 3
  Author: c. b. f. andersen, t. becker, m. blau, m. anand, m. halic, b. balar, t. mielke, t. boesen, j. s. pedersen, c. m. t. spahn, t. g. kinzy, g. r. andersen, r. beckmann
  Keywords: translation, elongation factor, phosphorylation, nucleotide-binding, rrna-binding, rna-binding, acetylation, atp-binding
  
• 2ix5.pdb. oxidoreductase 07-jul-06 2ix5
  Title: short chain specific acyl-coa oxidase from arabidopsis thaliana, acx4 in complex with acetoacetyl-coa
  Author: j. mackenzie, l. pedersen, s. arent, a. henriksen
  Keywords: acx4, flavin, peroxisome, glyoxysome, fatty acid metabolism, lipid metabolism, acyl-coa oxidase, electron transfer, flavoprotein, beta-oxidation, oxidoreductase
  
• 2ix6.pdb. oxidoreductase 07-jul-06 2ix6
  Title: short chain specific acyl-coa oxidase from arabidopsis thaliana, acx4
  Author: j. mackenzie, l. pedersen, s. arent, a. henriksen
  Keywords: acx4, flavin, peroxisome, glyoxysome, fatty acid metabolism, lipid metabolism, acyl-coa oxidase, electron transfer, flavoprotein, beta-oxidation, oxidoreductase
  
• 2ixe.pdb. hydrolase 07-jul-06 2ixe Mg
  Title: crystal structure of the atpase domain of tap1 with atp (d645n mutant)
  Author: e. procko, i. ferrin-o'connell, s. -l. ng, r. gaudet
  Keywords: hydrolase
  
• 2ixf.pdb. hydrolase 08-jul-06 2ixf Mg
  Title: crystal structure of the atpase domain of tap1 with atp (d645q, q678h mutant)
  Author: e. procko, i. ferrin-o'connell, s. -l. ng, r. gaudet
  Keywords: membrane, transport, abc atpase, atp-binding, protein transport, nucleotide-binding, hydrolase, transmembrane, immune response, peptide transport
  
• 2ixg.pdb. hydrolase 08-jul-06 2ixg
  Title: crystal structure of the atpase domain of tap1 with atp (s621a, g622v, d645n mutant)
  Author: e. procko, i. ferrin-o'connell, s. -l. ng, r. gaudet
  Keywords: membrane, transport, abc atpase, atp-binding, protein transport, nucleotide-binding, hydrolase, transmembrane, immune response, peptide transport
  
• 2ixq.pdb. cell adhesion 10-jul-06 2ixq (NMR, regularized mean structure)
  Title: the solution structure of the invasive tip complex from afa-dr fibrils
  Author: e. cota, c. jones, p. simpson, h. altroff, k. l. anderson, l. du merle, j. guignot, a. servin, c. le bouguenec, h. mardon, s. matthews
  Keywords: afimbrial sheath, structural protein, donor strand complemented, cell adhesion, daf, afae, upec, daec, fimbria
  
• 2iyq.pdb. transferase 21-jul-06 2iyq Cl
  Title: shikimate kinase from mycobacterium tuberculosis in complex with shikimate and adp
  Author: m. d. hartmann, g. p. bourenkov, a. oberschall, n. strizhov, h. d. bartunik
  Keywords: kinase, magnesium, p-loop kinase, metal-binding, shikimate kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis, transferase, atp-binding
  
• 2iyr.pdb. transferase 21-jul-06 2iyr
  Title: shikimate kinase from mycobacterium tuberculosis in complex with shikimate
  Author: m. d. hartmann, g. p. bourenkov, a. oberschall, n. strizhov, h. d. bartunik
  Keywords: kinase, magnesium, p-loop kinase, metal-binding, shikimate kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis, transferase, atp-binding
  
• 2iys.pdb. transferase 21-jul-06 2iys Cl
  Title: shikimate kinase from mycobacterium tuberculosis in complex with shikimate, open lid (conf. a)
  Author: m. d. hartmann, g. p. bourenkov, a. oberschall, n. strizhov, h. d. bartunik
  Keywords: p-loop kinase, metal-binding, shikimate kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis, kinase, magnesium, transferase, atp-binding
  
• 2iyt.pdb. transferase 22-jul-06 2iyt Cl
  Title: shikimate kinase from mycobacterium tuberculosis in unliganded state, open lid (conf. a)
  Author: m. d. hartmann, g. p. bourenkov, a. oberschall, n. strizhov, h. d. bartunik
  Keywords: p-loop kinase, metal-binding, shikimate kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis, kinase, magnesium, transferase, atp-binding
  
• 2iyu.pdb. transferase 22-jul-06 2iyu Cl
  Title: shikimate kinase from mycobacterium tuberculosis in complex with adp, open lid (conf. a)
  Author: m. d. hartmann, g. p. bourenkov, a. oberschall, n. strizhov, h. d. bartunik
  Keywords: p-loop kinase, metal-binding, shikimate kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis, kinase, magnesium, transferase, atp-binding
  
• 2iyv.pdb. transferase 22-jul-06 2iyv Cl
  Title: shikimate kinase from mycobacterium tuberculosis in complex with adp, open lid (conf. b)
  Author: m. d. hartmann, g. p. bourenkov, a. oberschall, n. strizhov, h. d. bartunik
  Keywords: p-loop kinase, metal-binding, shikimate kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis, kinase, magnesium, transferase, atp-binding
  
• 2iyx.pdb. transferase 22-jul-06 2iyx Cl Mg
  Title: shikimate kinase from mycobacterium tuberculosis in complex with shikimate and so4
  Author: m. d. hartmann, g. p. bourenkov, a. oberschall, n. strizhov, h. d. bartunik
  Keywords: p-loop kinase, metal-binding, shikimate kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis, kinase, magnesium, transferase, atp-binding
  
• 2iyy.pdb. transferase 22-jul-06 2iyy Cl Mg
  Title: shikimate kinase from mycobacterium tuberculosis in complex with shikimate-3-phosphate and so4
  Author: m. d. hartmann, g. p. bourenkov, a. oberschall, n. strizhov, h. d. bartunik
  Keywords: kinase, magnesium, p-loop kinase, metal-binding, shikimate kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis, transferase, atp-binding
  
• 2iyz.pdb. transferase 22-jul-06 2iyz
  Title: shikimate kinase from mycobacterium tuberculosis in complex with shikimate-3-phosphate and adp
  Author: m. d. hartmann, g. p. bourenkov, a. oberschall, n. strizhov, h. d. bartunik
  Keywords: kinase, magnesium, p-loop kinase, metal-binding, shikimate kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis, transferase, atp-binding
  
• 2j0f.pdb. transferase 02-aug-06 2j0f
  Title: structural basis for non-competitive product inhibition in human thymidine phosphorylase: implication for drug design
  Author: k. el omari, a. bronckaers, s. liekens, m. j. perez-perez, j. balzarini, d. k. stammers
  Keywords: chemotaxis, transferase, polymorphism, disease mutation, glycosyltransferase, angiogenesis, growth factor, differentiation, developmental protein, human thymidine phosphorylase
  
• 2j2c.pdb. hydrolase 16-aug-06 2j2c Mg
  Title: crystal structure of human cytosolic 5'-nucleotidase ii (nt5c2, cn-ii)
  Author: k. wallden, p. stenmark, c. arrowsmith, h. berglund, r. busam, r. collins, a. edwards, m. ehn, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg schiavone, m. hogbom, t. karlberg, t. kotenyova, p. loppnau, a. magnusdottir, p. nilsson-ehle, t. nyman, d. ogg, c. persson, j. sagemark, m. sundstrom, j. uppenberg, a. g. thorsell, s. van den berg, j. weigelt, m. welin, p. nordlund
  Keywords: allosteric enzyme, gmp-imp specific nucleotidase, high km 5-prime nucleotidase, cn-ii, nt5c2, hydrolase, polymorphism, cytosolic purine 5-prime nucleotidase
  
• 2j2t.pdb. hydrolase 17-aug-06 2j2t
  Title: agmatine deiminase from enterococcus faecalis covalently linked with a reaction intermediate
  Author: s. tavarez, j. l. llacer, v. rubio
  Keywords: tetramer, hydrolase, agdi, 5-fold pseudosymmetric structure, agmatine degradation pathway, covalent amidino adduct, agmatine iminohydrolase
  
• 2j2u.pdb. hydrolase 17-aug-06 2j2u Cl
  Title: crystal structure of a human factor xa inhibitor complex
  Author: s. senger, m. a. convery, c. chan, n. s. watson
  Keywords: serine protease, egf-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation, gamma-carboxyglutamic acid, calcium, zymogen, complex, protease, hydrolase
  
• 2j34.pdb. hydrolase 18-aug-06 2j34 Cl Ca
  Title: crystal structure of a human factor xa inhibitor complex
  Author: s. senger, m. a. convery, c. chan, n. s. watson
  Keywords: serine protease, egf-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation, gamma-carboxyglutamic acid,calcium, zymogen, complex, protease, hydrolase
  
• 2j38.pdb. hydrolase 18-aug-06 2j38 Cl Ca
  Title: crystal structure of a human factor xa inhibitor complex
  Author: s. senger, m. a. convery, c. chan, n. s. watson
  Keywords: serine protease, egf-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation, gamma-carboxyglutamic acid, calcium, zymogen, complex, protease, hydrolase
  
• 2j3h.pdb. oxidoreductase 21-aug-06 2j3h
  Title: crystal structure of arabidopsis thaliana double bond reductase (at5g16970)-apo form
  Author: b. youn, s. j. kim, s. g. moinuddin, c. lee, d. l. bedgar, a. r. harper, l. b. davin, n. g. lewis, c. kang
  Keywords: nadp, apo form, oxidoreductase, arabidopsis thaliana
  
• 2j3i.pdb. oxidoreductase 21-aug-06 2j3i
  Title: crystal structure of arabidopsis thaliana double bond reductase (at5g16970)-binary complex
  Author: b. youn, s. j. kim, s. g. moinuddin, c. lee, d. l. bedgar, a. r. harper, l. b. davin, n. g. lewis, c. kang
  Keywords: binary complex nadp, apo form, oxidoreductase, arabidopsis thaliana
  
• 2j3j.pdb. oxidoreductase 21-aug-06 2j3j
  Title: crystal structure of arabidopsis thaliana double bond reductase (at5g16970)-ternary complex i
  Author: b. youn, s. j. kim, s. g. moinuddin, c. lee, d. l. bedgar, a. r. harper, l. b. davin, n. g. lewis, c. kang
  Keywords: arabidopsis thaliana, nadp, oxidoreductase, ternary complex, double bond reductase (at5g16970)
  
• 2j3k.pdb. oxidoreductase 22-aug-06 2j3k
  Title: crystal structure of arabidopsis thaliana double bond reductase (at5g16970)-ternary complex ii
  Author: b. youn, s. j. kim, s. g. moinuddin, c. lee, d. l. bedgar, a. r. harper, l. b. davin, n. g. lewis, c. kang
  Keywords: 4-hydroxy-2- nonenal, nadp, oxidoreductase, ternary complex ii, double bond reductase (at5g16970)
  
• 2j3l.pdb. ligase 22-aug-06 2j3l
  Title: prolyl-trna synthetase from enterococcus faecalis complexed with a prolyl-adenylate analogue ('5'-o-(n-(l-prolyl)- sulfamoyl)adenosine)
  Author: t. crepin, a. yaremchuk, m. tukalo, s. cusack
  Keywords: class ii aminoacyl- trna synthetase,editing,translation,atp + l-proline + trna (pro) gives amp + ppi + l-prolyl-trna(pro), ligase
  
• 2j3m.pdb. ligase 22-aug-06 2j3m Mn
  Title: prolyl-trna synthetase from enterococcus faecalis complexed with atp, manganese and prolinol
  Author: t. crepin, a. yaremchuk, m. tukalo, s. cusack
  Keywords: class ii aminoacyl- trna synthetase,editing,translation,atp + l-proline + trna (pro) gives amp + ppi + l-prolyl-trna(pro), ligase
  
• 2j3v.pdb. toxin 23-aug-06 2j3v
  Title: crystal structure of the enzymatic component c2-i of the c2- toxin from clostridium botulinum at ph 3.0
  Author: c. schleberger, h. hochmann, h. barth, k. aktories, g. e. schulz
  Keywords: toxin, clostridium botulinum
  
• 2j3x.pdb. toxin 23-aug-06 2j3x
  Title: crystal structure of the enzymatic component c2-i of the c2-toxin from clostridium botulinum at ph 3.0 (mut-s361r)
  Author: c. schleberger, h. hochmann, h. barth, k. aktories, g. e. schulz
  Keywords: toxin, clostridium botulinum
  
• 2j3z.pdb. toxin 23-aug-06 2j3z Co
  Title: crystal structure of the enzymatic component c2-i of the c2-toxin from clostridium botulinum at ph 6.1
  Author: c. schleberger, h. hochmann, h. barth, k. aktories, g. e. schulz
  Keywords: toxin, clostridium botulinum
  
• 2j41.pdb. transferase 24-aug-06 2j41 K
  Title: crystal structure of staphylococcus aureus guanylate monophosphate kinase
  Author: k. el omari, b. dhaliwal, m. lockyer, i. charles, a. r. hawkins, d. k. stammers
  Keywords: gmk, kinase, transferase, atp-binding, nucleotide-binding, staphylococcus aureus
  
• 2j42.pdb. toxin 24-aug-06 2j42
  Title: low quality crystal structure of the transport component c2- ii of the c2-toxin from clostridium botulinum
  Author: c. schleberger, h. hochmann, h. barth, k. aktories, g. e. schulz
  Keywords: clostridium botulinum, c2-ii
  
• 2j6f.pdb. protein binding 28-sep-06 2j6f
  Title: n-terminal sh3 domain of cms (cd2ap human homolog) bound to cbl-b peptide
  Author: g. moncalian, n. cardenes, y. l. deribe, m. spinola-amilibia, i. dikic, j. bravo
  Keywords: phosphorylation, adaptor protein, egfr downregulation, alternative splicing, cd2 associated protein, protein binding
  
• 2j6k.pdb. protein binding 29-sep-06 2j6k Na
  Title: n-terminal sh3 domain of cms (cd2ap human homolog)
  Author: g. moncalian, n. cardenes, y. l. deribe, m. spinola-amilibia, i. dikic, j. bravo
  Keywords: adaptor protein, egfr downregulation, sh3, sh3 domain, sh3-binding, coiled coil, cd2 associated protein, cytoskeletal rearrangements, surface active protein, signaling protein, protein binding
  
• 2j6l.pdb. oxidoreductase 29-sep-06 2j6l Br Na
  Title: structure of aminoadipate-semialdehyde dehydrogenase
  Author: g. bunkoczi, k. guo, j. e. debreczeni, c. smee, c. arrowsmith, a. edwards, m. sundstrom, j. weigelt, f. von delft, u. oppermann
  Keywords: nad, reductase, oxidoreductase, lysine catabolism
  
• 2j6o.pdb. protein binding 02-oct-06 2j6o
  Title: atypical polyproline recognition by the cms n-terminal sh3 domain. cms:cd2 heterotrimer
  Author: g. moncalian, n. cardenes, y. l. deribe, m. spinola-amilibia, i. dikic, j. bravo
  Keywords: adaptor protein, egfr downregulation, cms, sh3 domain, sh3-binding, coiled coil, sh3 domain recognition, signaling protein, protein binding
  
• 2jm0.pdb. structural protein 06-sep-06 2jm0 F (NMR, 20 structures)
  Title: solution structure of chicken villin headpiece subdomain containing a fluorinated side chain in the core
  Author: c. c. cornilescu, g. cornilescu, e. b. hadley, s. h. gellman, j. l. markley
  Keywords: vhp, chicken villin headpiece