Recent PDB releases or updates: week of 13 October 2006
- 1te4.pdb.
structural genomics, unknown function 24-may-04 1te4
(NMR, 40 structures)
Title: solution structure of mth187. ontario centre for structural proteomics target mth0187_1_111; northeast structural genomics target tt740
Author: i. gignac, o. julien, a. yee, c. h. arrowsmith, s. m. gagne, northeast structural genomics consortium (nesg)
Keywords: mth187, methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat, structural genomics, ocsp, nesg, protein structure initiative, psi, northeast structural genomics consortium
- 1tvm.pdb.
transferase 29-jun-04 1tvm
(NMR, 20 structures)
Title: nmr structure of enzyme gatb of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system
Author: l. volpon, c. r. young, n. s. lim, p. iannuzzi, m. cygler, k. gehring
Keywords: p-loop, four-stranded parallel open twisted beta sheet flanked by alpha helices on both sides, e. coli
- 1txj.pdb.
structural genomics, unknown function 05-jul-04 1txj
Title: crystal structure of translationally controlled tumour- associated protein (tctp) from plasmodium knowlesi
Author: j. r. walker, m. vedadi, s. sharma, s. houston, j. lew, m. amani, g. wasney, t. skarina, j. bray, m. sundstrom, c. arrowsmith, a. edwards, r. hui, structural genomics consortium (sgc)
Keywords: sgc, guanine nucleotide- free chaperones, guanine nucleotide exchange factor, beta- sandwich, helix-turn-helix
- 1uwm.pdb.
electron transport 05-feb-04 1uwm
Fe
Title: reduced ferredoxin 6 from rhodobacter capsulatus
Author: g. sainz, j. jakoncic, l. c. sieker, v. stojanoff, n. sanishvili, m. asso, p. bertrand, j. armengaud, y. jouanneau
Keywords: electron transport, metal-binding, iron-sulfur, iron, 2fe-2s
- 1wwn.pdb.
toxin 10-jan-05 1wwn
(NMR, 20 structures)
Title: nmr solution structure of bmk-betait, an excitatory scorpion toxin from buthus martensi karsch
Author: h. wu, x. tong, x. chen, q. zhang, x. zheng, n. zhang, g. wu
- 1xcc.pdb.
structural genomics, unknown function 01-sep-04 1xcc
Title: 1-cys peroxidoxin from plasmodium yoelli
Author: m. vedadi, s. sharma, s. houston, j. lew, g. wasney, m. amani, x. xu, j. bray, m. sundstrom, c. arrowsmith, a. edwards, r. hui, a. bochkarev, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 1xv1.pdb.
transferase 26-oct-04 1xv1
Title: human sulfotransferase sult1b1 in complex with pap
Author: l. dombrovski, t. pegasova, h. wu, p. loppnau, a. m. edwards, c. h. arrowsmith, m. sundstrom, a. n. plotnikov, a. bochkarev, structural genomics consortium (sgc)
Keywords: sulfotransferase, pap, structural genomics, structural genomics consortium, sgc
- 1y6l.pdb.
ligase 06-dec-04 1y6l
Title: human ubiquitin conjugating enzyme e2e2
Author: j. r. walker, g. v. avvakumov, e. m. newman, f. mackenzie, i. kozieradzki, a. bochkarev, m. sundstrom, c. arrowsmith, a. edwards, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: ubiquitin, ubiquitin- conjugating enzyme, ligase, sgc
- 1yh2.pdb.
ligase 06-jan-05 1yh2
Title: ubiquitin-conjugating enzyme hspc150
Author: j. r. walker, g. v. avvakumov, e. m. newman, f. mackenzie, i. kozieradzki, m. sundstrom, c. arrowsmith, a. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: hscp150, ubiquitin, ubiquitin-conjugating enzyme, ligase, sgc
- 1yh6.pdb.
ligase 07-jan-05 1yh6
Title: human ubiquitin-conjugating enzyme e2 h
Author: a. bochkarev, h. cui, j. r. walker, e. m. newman, f. mackenzie, k. p. battaile, m. sundstrom, c. arrowsmith, a. edwards, s. dhe- paganon, structural genomics consortium (sgc)
Keywords: ubiquitin, ubiquitin- conjugating enzyme, ube2h, sgc
- 1yo3.pdb.
transport protein 26-jan-05 1yo3
Title: 1.65 angstrom structure of the dynein light chain 1 from plasmodium falciparum
Author: j. r. walker, j. lew, m. amani, z. alam, g. wasney, k. boulanger, m. sundstrom, c. arrowsmith, a. edwards, r. hui, a. bochkarev, m. vedadi, structural genomics consortium (sgc)
Keywords: dynein light chain, microtubule, malaria, sgc
- 2a27.pdb.
transferase 22-jun-05 2a27
Title: human drp-1 kinase, w305s s308a d40 mutant, crystal form with 8 monomers in the asymmetric unit
Author: p. kursula, f. lehmann, g. shani, a. kimchi, m. wilmanns
Keywords: autoinhibition
- 2a2m.pdb.
structural genomics, unknown function 22-jun-05 2a2m
Se
Title: crystal structure of (np_812058.1) from bacteroides thetaiotaomicron vpi-5482 at 1.88 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi
- 2ahn.pdb.
allergen 28-jul-05 2ahn
Title: high resolution structure of a cherry allergen pru av 2
Author: y. dall'antonia, t. pavkov, h. fuchs, h. breiteneder, w. keller
Keywords: thaumatin-like protein
- 2ao3.pdb.
sugar binding protein 12-aug-05 2ao3
Cd
Title: crystal structure of the earthworm r-type lectin c-half
Author: r. suzuki, a. kuno, t. hasegawa, j. hirabayashi, k. kasai, m. momma, z. fujimoto
Keywords: hemagglutinin, r-type lectin, beta-trefoil fold, sugar complex
- 2ap0.pdb.
ribonucleic acid 15-aug-05 2ap0
(NMR, 20 structures)
Title: solution structure of the c27a scylv p1-p2 frameshifting pseudoknot, 20 lowest energy structures
Author: p. v. cornish, d. p. giedroc
- 2ap5.pdb.
ribonucleic acid 15-aug-05 2ap5
(NMR, minimized average structure)
Title: solution structure of the c27a scylv p1-p2 frameshifting pseudoknot, average structure
Author: p. v. cornish, d. p. giedroc
- 2awg.pdb.
signaling protein inhibitor 01-sep-05 2awg
Title: structure of the ppiase domain of the human fk506-binding protein 8
Author: j. r. walker, t. davis, e. m. newman, p. finerty, f. mackenzie, j. weigelt, m. sundstrom, c. arrowsmith, a. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: ppiase, bcl-2 inhibitor, shh signalling antagonist, structural genomics consortium, sgc
- 2b0o.pdb.
metal binding protein 14-sep-05 2b0o
Zn
Title: crystal structure of uplc1 gap domain
Author: s. ismail, l. shen, c. arrowsmith, a. edwards, m. sundstrom, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2b4x.pdb.
blood clotting 27-sep-05 2b4x
Author: t. e. adams, j. a. huntington, d. j. d. johnson, s. c. bock
- 2bzb.pdb.
transferase 10-aug-05 2bzb
(NMR, 32 structures)
Title: nmr solution structure of a protein aspartic acid phosphate phosphatase from bacillus anthracis
Author: r. grenha, n. rzechorzek, j. a. brannigan, e. ab, g. folkers, r. n. de jong, t. diercks, a. j. wilkinson, r. kaptein, k. s. wilson
Keywords: phosphorylation, sporulation, bacillus, anthracis, antithetical, negative, regulator, spine, transferase
- 2c0s.pdb.
transferase 06-sep-05 2c0s
(NMR, 25 structures)
Title: nmr solution structure of a protein aspartic acid phosphate phosphatase from bacillus anthracis
Author: r. grenha, n. rzechorzek, j. a. brannigan, e. ab, g. e. folkers, r. n. de jong, t. diercks, a. j. wilkinson, r. kaptein, k. s. wilson
Keywords: phosphorylation, sporulation, bacillus anthracis, antithetical, negative regulator, spine, transferase
- 2c2i.pdb.
lyase 28-sep-05 2c2i
Se
Title: structure and function of rv0130, a conserved hypothetical protein from m.tuberculosis
Author: p. johansson, a. castell, t. a. jones, k. backbro
Keywords: tuberculosis, conserved hypothetical protein, hotdog, hydratase, lyase
- 2ceq.pdb.
hydrolase 10-feb-06 2ceq
Title: beta-glycosidase from sulfolobus solfataricus in complex with glucoimidazole
Author: t. m. gloster, m. moracci, a. vasella, g. j. davies
Keywords: family 1, glycoside hydrolase, glucoimidazole, glycosidase, hydrolase
- 2cer.pdb.
hydrolase 10-feb-06 2cer
Title: beta-glycosidase from sulfolobus solfataricus in complex with phenethyl-substituted glucoimidazole
Author: t. m. gloster, s. roberts, m. moracci, a. vasella, g. j. davies
Keywords: inhibitor, transition state mimic, family 1, glucoimidazole, hydrolase
- 2ces.pdb.
hydrolase 10-feb-06 2ces
Ca
Title: beta-glucosidase from thermotoga maritima in complex with glucoimidazole
Author: t. m. gloster, s. roberts, a. vasella, g. j. davies
Keywords: inhibitor, transition state mimic, family 1, glucoimidazole, hydrolase
- 2cet.pdb.
hydrolase 10-feb-06 2cet
Ca
Title: beta-glucosidase from thermotoga maritima in complex with phenethyl-substituted glucoimidazole
Author: t. m. gloster, s. roberts, a. vasella, g. j. davies
Keywords: inhibitor, transition state mimic, family 1, phenethyl-substituted glucoimidazole, hydrolase
- 2ch5.pdb.
transferase 13-mar-06 2ch5
Title: crystal structure of human n-acetylglucosamine kinase in complex with n-acetylglucosamine
Author: w. a. weihofen, m. berger, h. chen, w. saenger, s. hinderlich
Keywords: glcnac, sugar kinase, ribonuclease h fold, sugar kinase/hsp70/actin superfamily, domain rotation, open conformation, closed conformation, transferase, hypothetical protein
- 2ch6.pdb.
transferase 13-mar-06 2ch6
Title: crystal structure of human n-acetylglucosamine kinase in complex with adp and glucose
Author: w. a. weihofen, m. berger, h. chen, w. saenger, s. hinderlich
Keywords: glcnac, sugar kinase, ribonuclease h fold, sugar kinase/hsp70/actin superfamily, domain rotation, open conformation, closed conformation, transferase, hypothetical protein
- 2cjl.pdb.
hydrolase 04-apr-06 2cjl
Zn
Title: crystal structure and enzymatic properties of a bacterial family 19 chitinase reveal differences with plant enzymes
Author: i. a. hoell, b. dalhus, e. b. heggset, s. i. aspmo, v. g. h. eijsink
Keywords: plant enzymes
- 2ckk.pdb.
nuclear protein 20-apr-06 2ckk
I
Title: high resolution crystal structure of the human kin17 c-terminal domain containing a kow motif kin17.
Author: a. le maire, m. schiltz, g. pinon-lataillade, e. stura, j. couprie, m. gondry, j. angulo-mora, s. zinn-justin
Keywords: ribosomal protein, ribonucleoprotein, nuclear protein
- 2cko.pdb.
transferase 20-apr-06 2cko
Title: crystal structure of human choline kinase alpha 2
Author: e. malito, a. lavie
Keywords: transferase, choline kinase, phosphatydilcholine, alternative splicing
- 2ckp.pdb.
transferase 20-apr-06 2ckp
Title: crystal structure of human choline kinase alpha-2 in complex with adp
Author: e. malito, a. lavie
Keywords: transferase, choline kinase, phosphatydilcholine, alternative splicing
- 2ckq.pdb.
transferase 20-apr-06 2ckq
Title: crystal structure of human choline kinase alpha 2 in complex with phosphocholine
Author: e. malito, a. lavie
Keywords: transferase, choline kinase, phosphatydilcholine, alternative splicing
- 2cxy.pdb.
dna binding protein 01-jul-05 2cxy
Se
Title: crystal structure of the hbaf250b at-rich interaction domain (arid)
Author: a. shimada, h. niwa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2d12.pdb.
sugar binding protein 12-aug-05 2d12
Title: crystal structure of the earthworm r-type lectin c-half
Author: r. suzuki, a. kuno, t. hasegawa, j. hirabayashi, k. kasai, m. momma, z. fujimoto
Keywords: hemagglutinin, r-type lectin, beta-trefoil fold, sugar complex
- 2d1c.pdb.
oxidoreductase 15-aug-05 2d1c
Title: crystal structure of tt0538 protein from thermus thermophilus hb8
Author: n. k. lokanath, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2d1z.pdb.
hydrolase 02-sep-05 2d1z
Title: crystal structure of catalytic-site mutant xylanase from streptomyces olivaceoviridis e-86
Author: r. suzuki, a. kuno, z. fujimoto, s. ito, s. i. kawahara, s. kaneko, t. hasegawa, k. taira
Keywords: retaining enzyme, catalytic-site mutant, chemical rescue
- 2d20.pdb.
hydrolase 02-sep-05 2d20
Title: crystal structure of michaelis complex of catalytic-site mutant xylanase from streptomyces olivaceoviridis e-86
Author: r. suzuki, a. kuno, z. fujimoto, s. ito, s. i. kawahara, s. kaneko, t. hasegawa, k. taira
Keywords: retaining enzyme, catalytic-site mutant, chemical rescue, michaelis complex
- 2d22.pdb.
hydrolase 02-sep-05 2d22
Title: crystal structure of covalent glycosyl-enzyme intermediate of catalytic-site mutant xylanase from streptomyces olivaceoviridis e-86
Author: r. suzuki, a. kuno, z. fujimoto, s. ito, s. i. kawahara, s. kaneko, t. hasegawa, k. taira
Keywords: retaining enzyme, catalytic-site mutant, chemical rescue, covalent glycosyl-enzyme intermediate
- 2d23.pdb.
hydrolase 02-sep-05 2d23
Title: crystal structure of ep complex of catalytic-site mutant xylanase from streptomyces olivaceoviridis e-86
Author: r. suzuki, a. kuno, z. fujimoto, s. ito, s. i. kawahara, s. kaneko, t. hasegawa, k. taira
Keywords: retaining enzyme, catalytic-site mutant, chemical rescue, ep complex
- 2d24.pdb.
hydrolase 02-sep-05 2d24
Title: crystal structure of es complex of catalytic-site mutant xylanase from streptomyces olivaceoviridis e-86
Author: r. suzuki, a. kuno, z. fujimoto, s. ito, s. i. kawahara, s. kaneko, t. hasegawa, k. taira
Keywords: retaining enzyme, catalytic-site mutant, chemical rescue, michaelis complex
- 2d3a.pdb.
ligase 26-sep-05 2d3a
Mn
Title: crystal structure of the maize glutamine synthetase complexed with adp and methionine sulfoximine phosphate
Author: h. unno, t. uchida, h. sugawara, g. kurisu, t. sugiyama, t. yamaya, h. sakakibara, t. hase, m. kusunoki
- 2d3b.pdb.
ligase 26-sep-05 2d3b
Mn
Title: crystal structure of the maize glutamine synthetase complexed with amppnp and methionine sulfoximine
Author: h. unno, t. uchida, h. sugawara, g. kurisu, t. sugiyama, t. yamaya, h. sakakibara, t. hase, m. kusunoki
- 2d3c.pdb.
ligase 26-sep-05 2d3c
Mn
Title: crystal structure of the maize glutamine synthetase complexed with adp and phosphinothricin phosphate
Author: h. unno, t. uchida, h. sugawara, g. kurisu, t. sugiyama, t. yamaya, h. sakakibara, t. hase, m. kusunoki
- 2d58.pdb.
metal binding protein 31-oct-05 2d58
Ni
Title: human microglia-specific protein iba1
Author: s. kamitori
- 2djn.pdb.
transcription 05-apr-06 2djn
(NMR, 20 structures)
Title: the solution structure of the homeobox domain of human homeobox protein dlx-5
Author: a. sasagawa, s. ohnishi, n. tochio, k. saito, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: dlx5, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2djo.pdb.
transcription 05-apr-06 2djo
(NMR, 20 structures)
Title: the solution structure of the second homeobox domain of human zinc fingers and homeoboxes protein
Author: a. sasagawa, s. ohnishi, n. tochio, k. saito, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: zinc fingers and homeoboxes protein, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2djp.pdb.
structural genomics, unknown function 05-apr-06 2djp
(NMR, 20 structures)
Title: the solution structure of the lysm domain of human hypothetical protein sb145
Author: a. sasagawa, n. tochio, k. saito, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: hypothetical protein sb145, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2djq.pdb.
structural genomics, unknown function 05-apr-06 2djq
(NMR, 20 structures)
Title: the solution structure of the first sh3 domain of mouse sh3 domain containing ring finger 2
Author: a. sasagawa, n. tochio, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: riken structural genomics/proteomics initiative, rsgi
- 2djr.pdb.
metal binding protein 05-apr-06 2djr
Zn
(NMR, 20 structures)
Title: solution structures of the c2h2 type zinc finger domain of human zinc finger bed domain containing protein 2
Author: m. sato, a. sasagawa, n. tochio, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2djs.pdb.
signaling protein 05-apr-06 2djs
(NMR, 20 structures)
Title: solution structures of the fn3 domain of human ephrin type- b receptor 1
Author: m. sato, n. tochio, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: net, hek6, elk, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2djt.pdb.
signaling protein 05-apr-06 2djt
(NMR, 20 structures)
Title: solution structures of the pdz domain of human unnamed protein product
Author: m. sato, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dju.pdb.
signaling protein 05-apr-06 2dju
(NMR, 20 structures)
Title: solution structures of the fn3 domain of human receptor- type tyrosine-protein phosphatase f
Author: m. sato, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: leukocyte antigen related, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2djv.pdb.
protein binding 05-apr-06 2djv
(NMR, 20 structures)
Title: solution structures of the whep-trs domain of human methionyl-trna synthetase
Author: m. sato, a. sasagawa, n. tochio, s. koshiba, m. inoue, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: whep-trs domain, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2djz.pdb.
ligase 06-apr-06 2djz
Title: crystal structure of biotin protein ligase from pyrococcus horikoshii ot3 in complex with biotinyl-5'-amp, k111a mutation
Author: b. bagautdinov, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
Keywords: dimer, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dk1.pdb.
gene regulation 06-apr-06 2dk1
(NMR, 20 structures)
Title: solution structure of ww domain in ww domain binding protein 4 (wbp-4)
Author: f. he, y. muto, m. inoue, t. kigawa, m. shirouzu, t. terada, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: riken structural genomics/proteomics initiative, rsgi
- 2dk2.pdb.
gene regulation 06-apr-06 2dk2
(NMR, 20 structures)
Title: solution structure of rrm domain in heterogeneous nuclear ribonucleoprotein r (hnrnp r)
Author: f. he, y. muto, m. inoue, t. kigawa, m. shirouzu, t. terada, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: rsgi
- 2dk3.pdb.
protein binding 06-apr-06 2dk3
(NMR, 20 structures)
Title: solution structure of mib-herc2 domain in hect domain containing protein 1
Author: f. he, y. muto, m. inoue, t. kigawa, m. shirouzu, t. terada, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: mib-herc2 domain, hect domain containing protein 1, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dk4.pdb.
gene regulation 06-apr-06 2dk4
(NMR, 20 structures)
Title: solution structure of splicing factor motif in pre-mrna splicing factor 18 (hprp18)
Author: f. he, y. muto, m. inoue, t. kigawa, m. shirouzu, t. terada, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: sfm domain, pre-mrna splicing factor 18, hprp18, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2dk5.pdb.
translation, transferase 06-apr-06 2dk5
(NMR, 20 structures)
Title: solution structure of winged-helix domain in rna polymerase iii 39kda polypeptide
Author: f. he, y. muto, m. inoue, t. kigawa, m. shirouzu, t. terada, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, winged helix domain, dna-directed rna polymerase iii, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsg...
- 2dk8.pdb.
translation 06-apr-06 2dk8
(NMR, 20 structures)
Title: solution structure of rpc34 subunit in rna polymerase iii from mouse
Author: f. he, y. muto, m. inoue, t. kigawa, m. shirouzu, t. terada, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, rna_pol_rpc34 domain, rna polymerase iii c39 subunit, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsg...
- 2dru.pdb.
immune system 15-jun-06 2dru
Title: crystal structure and binding properties of the cd2 and cd244 (2b4) binding protein, cd48
Author: e. j. evans, s. ikemizu, s. j. davis
- 2dsx.pdb.
electron transport 07-jul-06 2dsx
Fe
Title: crystal structure of rubredoxin from desulfovibrio gigas to ultra-high 0.68 a resolution
Author: c. -j. chen, y. -h. lin, y. -c. huang, m. -y. liu
Keywords: desulfovibrio gigas, redox
- 2dux.pdb.
oxidoreductase 27-jul-06 2dux
F
Title: crystal structure of human aldose reductase complexed with zopolrestat after 3 days soaking (3days_soaked_1)
Author: h. steuber, a. heine, g. klebe
- 2duz.pdb.
oxidoreductase 27-jul-06 2duz
F
Title: human aldose reductase complexed with inhibitor zopolrestat after 3 days soaking (3days_soaked_2)
Author: h. steuber, a. heine, g. klebe
- 2dv0.pdb.
oxidoreductase 28-jul-06 2dv0
F
Title: human aldose reductase complexed with zopolrestat after 6 days soaking(6days_soaked_2)
Author: h. steuber, a. heine, g. klebe
- 2dx5.pdb.
protein transport/signaling protein 24-aug-06 2dx5
Title: the complex structure between the mouse eap45-glue domain and ubiquitin
Author: s. hirano, n. suzuki, t. slagsvold, m. kawasaki, d. trambaiolo, r. kato, h. stenmark, s. wakatsuki
Keywords: protein-protein complex
- 2esl.pdb.
isomerase 26-oct-05 2esl
Zn Ca
Title: human cyclophilin c in complex with cyclosporin a
Author: j. r. walker, t. davis, e. m. newman, p. j. finerty jr. , f. mackenzie, j. weigelt, m. sundstrom, c. arrowsmith, a. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: cis-trans isomerization, protein-folding, structural genomics consortium, sgc
- 2etg.pdb.
transferase 27-oct-05 2etg
Title: human sulfotransferase sult1c1 in complex with pap
Author: a. dong, l. dombrovski, p. loppnau, a. m. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: pap, structural genomics, psi, protein structure initiative, structural genomics consortium, sgc
- 2etm.pdb.
transferase 27-oct-05 2etm
Title: crystal structure of focal adhesion kinase domain complexed with 7h-pyrrolo [2,3-d] pyrimidine derivative
Author: c. c. lee
- 2eu1.pdb.
chaperone/peptide binding protein 28-oct-05 2eu1
Title: crystal structure of the chaperonin groel-e461k
Author: a. cabo-bilbao, s. spinelli, b. sot, j. agirre, a. e. mechaly, a. muga, d. m. a. guerin
Keywords: groel, hsp60, e461k
- 2eu7.pdb.
transport protein 28-oct-05 2eu7
Fe
Title: crystal structure of d1a mutant of nitrophorin 2 complexed with ammonia
Author: a. weichsel, w. r. montfort
Keywords: lipocalin, ferric heme, mutant
- 2ev8.pdb.
membrane protein 31-oct-05 2ev8
(NMR, 20 structures)
Title: solution structure of the erythroid p55 pdz domain
Author: h. kusunoki, t. kohno
Keywords: p55, pdz
- 2ew0.pdb.
structural genomics, unknown function 01-nov-05 2ew0
Se
Title: novel x-ray structure of hypothetical protein q6ff54 at the resolution 1.4 a. northeast structural genomics target asr1.
Author: a. p. kuzin, m. abashidze, s. m. vorobiev, f. forouhar, t. acton, r. xiao, northeast structural genomics consortium (nesg)
Keywords: asr1, x-ray, nesg, structural genomics, psi, protein structure initiative, northeast structural genomics consortium
- 2f0x.pdb.
hydrolase 14-nov-05 2f0x
Se
Title: crystal structure and function of human thioesterase superfamily member 2(them2)
Author: z. cheng, f. song, x. shan, y. wang, z. wei, w. gong
- 2f15.pdb.
sugar binding protein 14-nov-05 2f15
Title: glycogen-binding domain of the amp-activated protein kinase beta2 subunit
Author: j. r. walker, l. groot-wybenga, p. j. finerty jr. , e. newman, f. m. mackenzie, j. weigelt, m. sundstrom, c. arrowsmith, a. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: fatty acid biosynthesis, lipid synthesis, phosphorylation, structural genomics consortium, sgc
- 2f4w.pdb.
ligase 24-nov-05 2f4w
Title: human ubiquitin-conjugating enzyme e2 j2
Author: j. r. walker, g. v. avvakumov, s. xue, p. j. finerty jr. , e. m. newman, f. mackenzie, j. weigelt, m. sundstrom, c. arrowsmith, a. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: ligase, ubl conjugation pathway, structural genomics consortium (sgc)
- 2f7s.pdb.
signaling protein 01-dec-05 2f7s
Mg
Title: the crystal structure of human rab27b bound to gdp
Author: j. wang, s. ismail, y. shen, w. tempel, c. h. arrowsmith, a. m. edwards, m. sundstrom, a. bochkarev, h. w. park, structural genomics consortium (sgc)
Keywords: g-protein, rab, structural genomics, structural genomics consortium, sgc
- 2f8b.pdb.
oncoprotein, virus/viral protein 02-dec-05 2f8b
Zn
(NMR, 15 structures)
Title: nmr structure of the c-terminal domain (dimer) of hpv45 oncoprotein e7
Author: o. ohlenschlager, m. gorlach
Keywords: dimer, hpv, oncoprotein, zinc binding
- 2fav.pdb.
virus/viral protein 08-dec-05 2fav
Se
Title: crystal structure of sars macro domain in complex with adp- ribose at 1.8 a resolution
Author: m. p. egloff, h. malet, marseilles structural genomics program @ afmb (msgp)
Keywords: structural genomics, structural proteomics in europe, marseilles structural genomics program @ afmb, msgp
- 2faz.pdb.
ligase 08-dec-05 2faz
Title: ubiquitin-like domain of human nuclear zinc finger protein np95
Author: j. r. walker, l. groot-wybenga, r. s. doherty, p. j. finerty jr. , e. newman, f. m. mackenzie, j. weigelt, m. sundstrom, c. arrowsmith, a. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: sgc
- 2fbm.pdb.
structural genomics, unknown function 09-dec-05 2fbm
Cl
Title: acetyltransferase domain of cdy1
Author: j. r. min, t. antoshenko, w. hong, p. loppnau, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2fds.pdb.
structural genomics, unknown function 14-dec-05 2fds
I
Title: crystal structure of plasmodium berghei orotidine 5'- monophosphate decarboxylase (ortholog of plasmodium falciparum pf10_0225)
Author: w. qiu, a. dong, g. wasney, m. vedadi, j. lew, i. kozieradski, z. alam, m. melone, j. weigelt, m. sundstrom, a. edwards, c. arrowsmith, r. hui, m. gao, a. bochkarev, j. d. artz, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2foz.pdb.
hydrolase 15-jan-06 2foz
Mg
Title: human adp-ribosylhydrolase 3
Author: c. mueller-dieckmann, m. s. weiss, f. koch-nolte
Keywords: metal binding
- 2fp0.pdb.
hydrolase 15-jan-06 2fp0
Mg
Title: human adp-ribosylhydrolase 3
Author: c. mueller-dieckmann, m. s. weiss, f. koch-nolte
Keywords: metal binding, adp-ribose binding
- 2fup.pdb.
structural genomics, unknown function 27-jan-06 2fup
Se
Title: crystal structure of a hypothetical protein (np_252042.1) from pseudomonas aeruginosa at 1.48 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: structural genomics, psi, protein structure initiative, joint center for structural genomics, jcsg
- 2fvd.pdb.
transferase 30-jan-06 2fvd
F
Title: cyclin dependent kinase 2 (cdk2) with diaminopyrimidine inhibitor
Author: r. l. crowther, c. m. lukacs, r. u. kammlott
- 2fy8.pdb.
transport protein 07-feb-06 2fy8
Title: crystal structure of mthk rck domain in its ligand-free gating-ring form
Author: s. ye, y. jiang
Keywords: transition state
- 2fyj.pdb.
protein binding 08-feb-06 2fyj
(NMR, 15 structures)
Title: nmr solution structure of calcium-loaded lrp double module
Author: g. a. jensen, o. m. andersen, a. m. bonvin, i. bjerrum-bohr, m. etzerodt, c. o'shea, f. m. poulsen, b. b. kragelund
Keywords: complement type repeat, calcium, beta-2 hairpin, loop-structures
- 2fyl.pdb.
surface active protein 08-feb-06 2fyl
Ca
(NMR)
Title: haddock model of the complex between double module of lrp, cr56, and first domain of receptor associated protein, rap- d1.
Author: g. a. jensen, o. m. andersen, a. m. bonvin, i. bjerrum-bohr, m. etzerodt, c. o'shea, f. m. poulsen, b. b. kragelund
Keywords: shift-mapping, haddock, nmr, interface
- 2fz0.pdb.
membrane protein 08-feb-06 2fz0
(NMR, 20 structures)
Title: identification of yeast r-snare nyv1p as a novel longin domain protein
Author: w. wen, m. zhang
Keywords: longin domain
- 2fzp.pdb.
ligase 10-feb-06 2fzp
Title: crystal structure of the usp8 interaction domain of human nrdp1
Author: j. r. walker, g. v. avvakumov, s. xue, e. m. newman, c. butler-cole, p. j. finerty jr. , j. weigelt, m. sundstrom, c. arrowsmith, a. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: protein ubiquitination, structural genomics, structural genomics consortium, sgc
- 2g57.pdb.
oncoprotein 22-feb-06 2g57
(NMR, 10 structures)
Title: structure of the phosphorylation motif of the oncogenic protein beta-catenin recognized by a selective monoclonal antibody
Author: s. megy, g. bertho, j. gharbi-benarous, f. baleux, r. benarous, j. p. girault
Keywords: p-beta-catenin phosphorylated peptide, epitope mapping, antibody, p-beta- catenin/antibody complex, std-nmr, trnoesy, restrained molecular dynamics, bound structure, binding fragment
- 2g7r.pdb.
hydrolase 28-feb-06 2g7r
Title: x-ray structure of the death domain of the human mucosa associated lymphoid tissue lymphoma translocation protein 1
Author: j. r. walker, l. groot-wybenga, e. m. newman, p. j. finerty jr. , c. butler-cole, j. weigelt, m. sundstrom, c. arrowsmith, a. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: alternative splicing, chromosomal translocation, hydrolase, protease, structural genomics consortium, sgc
- 2g83.pdb.
signaling protein 01-mar-06 2g83
Mg F Al
Title: structure of activated g-alpha-i1 bound to a nucleotide- state-selective peptide: minimal determinants for recognizing the active form of a g protein alpha subunit
Author: c. a. johnston, j. k. ramer, r. blaesius, b. kuhlman, v. y. arshavsky, d. p. siderovski
Keywords: phage display peptide
- 2g9o.pdb.
hydrolase 07-mar-06 2g9o
(NMR, 30 structures)
Title: solution structure of the apo form of the third metal- binding domain of atp7a protein (menkes disease protein)
Author: l. banci, i. bertini, f. cantini, n. dellamalva, a. rosato, t. herrmann, k. wuthrich, structural proteomics in europe (spine)
Keywords: nmr, solution structure, structural genomics, structural proteomics in europe, spine
- 2g9y.pdb.
hydrolase 07-mar-06 2g9y
Mg Zn
Title: structure of s102t e. coli alkaline phosphatase in presence of phosphate at 2.00 a resolution
Author: j. wang, e. r. kantrowitz
Keywords: mutagenesis, side chain conformation, covalent intermediate, rate-determining step
- 2ga3.pdb.
hydrolase 07-mar-06 2ga3
Mg Zn
Title: structure of s102t e. coli alkaline phosphatase-phosphate intermediate at 2.20a resolution
Author: j. wang, e. r. kantrowitz
Keywords: mutagenesis, side chain conformation, covalent intermediate, rate-determining step
- 2ga7.pdb.
hydrolase 08-mar-06 2ga7
Cu
(NMR, 30 structures)
Title: solution structure of the copper(i) form of the third metal- binding domain of atp7a protein (menkes disease protein)
Author: l. banci, i. bertini, f. cantini, n. dellamalva, a. rosato, t. herrmann, k. wuthrich, structural proteomics in europe (spine)
Keywords: solution structure, menkes disease-associated protein, copper(i), structural genomics, structural proteomics in europe, spine
- 2gbd.pdb.
hormone/gorwth factor receptor 10-mar-06 2gbd
Title: human nr4a1 ligand-binding domain
Author: j. r. min, a. schuetz, p. loppnau, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2giu.pdb.
transcription regulator 29-mar-06 2giu
Br
Title: human estrogen receptor beta ligand-binding domain in complex with compound 45
Author: p. m. d. fitzgerald, n. sharma
Keywords: transcription factor, er-beta, agonist
- 2gju.pdb.
structural genomics, unknown function 31-mar-06 2gju
Na
Title: crystal structure of hypothetical protein ph1004 from pyrococcus horikoshii ot3
Author: h. yamamoto, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2gof.pdb.
virus/viral protein 12-apr-06 2gof
(NMR, 21 structures)
Title: three-dimensional structure of the trans-membrane domain of vpu from hiv-1 in aligned phospholipid bicelles
Author: s. h. park, a. a. de angelis, a. a. nevzorov, c. h. wu, s. j. opella
Keywords: bicelle, magnetic alignment
- 2goh.pdb.
virus/viral protein 12-apr-06 2goh
(NMR, 21 structures)
Title: three-dimensional structure of the trans-membrane domain of vpu from hiv-1 in aligned phospholipid bicelles
Author: s. h. park, a. a. de angelis, a. a. nevzorov, c. h. wu, s. j. opella
Keywords: 16c bicelles, magnetic alignment
- 2gsm.pdb.
oxidoreductase 26-apr-06 2gsm
Mg Cu Fe Ca Cd
Title: catalytic core (subunits i and ii) of cytochrome c oxidase from rhodobacter sphaeroides
Author: l. qin, c. hiser, a. mulichak, r. m. garavito, s. ferguson-miller
- 2gvu.pdb.
hydrolase 03-may-06 2gvu
Ca
Title: crystal structure of diisopropyl fluorophosphatase (dfpase), mutant d229n / n120d
Author: j. c. h. chen, m. m. blum
Keywords: beta-propeller
- 2gvv.pdb.
hydrolase 03-may-06 2gvv
Ca
Title: structure of diisopropyl fluorophosphatase (dfpase) in complex with dicyclopentylphosphoroamidate (dcppa)
Author: j. c. h. chen, m. m. blum
Keywords: phosphotriesterase
- 2gvw.pdb.
hydrolase 03-may-06 2gvw
Ca
Title: structure of diisopropyl fluorophosphatase (dfpase) holoenzyme (rt)
Author: j. c. h. chen, m. m. blum
Keywords: phosphotriesterase
- 2gvx.pdb.
hydrolase 03-may-06 2gvx
Ca
Title: structure of diisopropyl fluorophosphatase (dfpase), mutant d229n / n175d
Author: m. -m. blum, f. lohr, a. richardt, h. ruterjans, j. c. -h. chen
Keywords: phosphotriesterase
- 2gw9.pdb.
antibiotic 04-may-06 2gw9
(NMR, 20 structures)
Title: high-resolution solution structure of the mouse defensin cryptdin4
Author: k. j. rosengren, d. j. craik, h. j. vogel, n. l. daly, a. j. ouellette
Keywords: beta hairpin
- 2gwc.pdb.
ligase 04-may-06 2gwc
Mg Se
Title: crystal structure of plant glutamate cysteine ligase in complex with a transition state analogue
Author: m. hothorn, a. wachter, r. gromes, t. stuwe, t. rausch, k. scheffzek
Keywords: glutathione biosynthesis, beta-hairpin, redox regulation
- 2gwd.pdb.
ligase 04-may-06 2gwd
Mg
Title: crystal structure of plant glutamate cysteine ligase in complex with mg2+ and l-glutamate
Author: m. hothorn, a. wachter, r. gromes, t. stuwe, t. rausch, k. scheffzek
Keywords: glutathione biosynthesis, beta-hairpin, redox regulation
- 2gwp.pdb.
antibiotic 05-may-06 2gwp
(NMR, 20 structures)
Title: high-resolution solution structure of the salt-bridge defficient mouse defensin (e15d)-cryptdin4
Author: k. j. rosengren, d. j. craik, h. j. vogel, n. l. daly, a. j. ouellette
Keywords: beta hairpin
- 2h2n.pdb.
hydrolase 19-may-06 2h2n
Ca
Title: crystal structure of human soluble calcium-activated nucleotidase (scan) with calcium ion
Author: m. yang, k. horii, a. b. herr, t. l. kirley
Keywords: five-blade beta propeller, calcium-binding protein, nucleotide-binding
- 2h2p.pdb.
ion transport 19-may-06 2h2p
Se
Title: crystal structure of clc-ec1 in complex with fab fragment in secn-
Author: w. nguitragool, c. miller
- 2h2s.pdb.
ion transport 19-may-06 2h2s
Se
Title: crystal structure of e148a mutant of clc-ec1 in secn-
Author: w. nguitragool, c. miller
- 2h2u.pdb.
hydrolase 19-may-06 2h2u
Ca
Title: crystal structure of the e130y mutant of human soluble calcium-activated nucleotidase (scan) with calcium ion
Author: m. yang, k. horii, a. b. herr, t. l. kirley
Keywords: five-blade beta propeller, calcium-binding protein, nucleotide-binding
- 2h66.pdb.
structural genomics/oxidoreductase 30-may-06 2h66
Title: the crystal structure of plasmodium vivax 2-cys peroxiredoxin
Author: a. k. wernimont, a. dong, y. zhao, j. lew, m. melone, i. kozieradzki, j. weigelt, m. sundstrom, a. m. edwards, c. h. arrowsmith, a. bochkarev, r. hui, j. d. artz, structural genomics consortium (sgc)
Keywords: vivax, peroxiredoxin, structural genomics, structural genomics consortium, sgc
- 2h6d.pdb.
signaling protein,transferase 31-may-06 2h6d
Title: protein kinase domain of the human 5'-amp-activated protein kinase catalytic subunit alpha-2 (ampk alpha-2 chain)
Author: d. r. littler, j. r. walker, l. groot-wybenga, e. m. newman, c. butler- cole, f. mackenzie, p. j. finerty, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2h7w.pdb.
hydrolase inhibitor 05-jun-06 2h7w
Title: crystal structure of chagasin, the endogenous cysteine- protease inhibitor from trypanosoma cruzi
Author: a. a. figueiredo da silva, b. g. guimaraes
Keywords: immunoglobulin-fold
- 2h8d.pdb.
transport protein 07-jun-06 2h8d
K Fe
Title: crystal structure of deoxy hemoglobin from trematomus bernacchii at ph 8.4
Author: l. mazzarella, a. vergara, l. vitagliano, a. merlino, g. bonomi, s. scala, c. verde, g. di prisco
Keywords: ph, cooperativity, hemoglobin, allostery, high resolution
- 2h8f.pdb.
transport protein 07-jun-06 2h8f
Fe
Title: crystal structure of deoxy hemoglobin from trematomus bernacchii at ph 6.2
Author: l. mazzarella, a. vergara, l. vitagliano, a. merlino, g. bonomi, s. scala, c. verde, g. di prisco
Keywords: ph, cooperativity, hemoglobin, allostery, high resolution
- 2h8g.pdb.
hydrolase 07-jun-06 2h8g
Title: 5'-methylthioadenosine nucleosidase from arabidopsis thaliana
Author: e. y. park, s. i. oh, m. j. nam, j. s. shin, k. n. kim, h. k. song
- 2h8k.pdb.
transferase 07-jun-06 2h8k
Title: human sulfotranferase sult1c3 in complex with pap
Author: w. tempel, l. dombrovski, p. loppnau, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: sulfate conjugation, pap, structural genomics, structural genomics consortium, sgc
- 2h9a.pdb.
oxidoreductase 09-jun-06 2h9a
Co I Fe
Title: corrinoid iron-sulfur protein
Author: h. dobbek
Keywords: beta-alpha-barrels
- 2he9.pdb.
isomerase 21-jun-06 2he9
Title: structure of the peptidylprolyl isomerase domain of the human nk-tumour recognition protein
Author: j. r. walker, t. davis, e. m. newman, f. mackenzie, c. butler-cole, p. j. finerty jr. , j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics, structural genomics consortium, sgc
- 2hf8.pdb.
hydrolase, metal binding protein 23-jun-06 2hf8
Mg Zn Se
Title: crystal structure of hypb from methanocaldococcus jannaschii in the triphosphate form, in complex with zinc
Author: r. gasper, a. scrima, a. wittinghofer
Keywords: p-loop containing nucleoside triphosphate hydrolase
- 2hf9.pdb.
hydrolase, metal binding protein 23-jun-06 2hf9
Mg Zn
Title: crystal structure of hypb from methanocaldococcus jannaschii in the triphosphate form
Author: r. gasper, a. scrima, a. wittinghofer
Keywords: p-loop containing nucleoside triphosphate hydrolase
- 2hhh.pdb.
ribosome 28-jun-06 2hhh
Title: crystal structure of kasugamycin bound to the 30s ribosomal subunit
Author: f. schluenzen
Keywords: 30s, antibiotics, initiation
- 2hmj.pdb.
oxidoreductase 11-jul-06 2hmj
Fe
Title: crystal structure of the naphthalene 1,2-dioxygenase phe- 352-val mutant.
Author: d. j. ferraro, a. l. okerlund, j. c. mowers, s. ramaswamy
Keywords: protein, oxioreductase
- 2hmk.pdb.
oxidoreductase 11-jul-06 2hmk
Fe
Title: crystal structure of naphthalene 1,2-dioxygenase bound to phenanthrene
Author: d. j. ferraro, a. l. okerlund, j. c. mowers, s. ramaswamy
Keywords: protien, rieske oxygenase
- 2hml.pdb.
oxioreductase 11-jul-06 2hml
Fe
Title: crystal structure of the naphthalene 1,2-dioxygenase f352v mutant bound to phenanthrene.
Author: d. j. ferraro, a. l. okerlund, j. c. mowers, s. ramaswamy
Keywords: protien, rieske oxygenase
- 2hmm.pdb.
oxioreductase 11-jul-06 2hmm
Fe
Title: crystal structure of naphthalene 1,2-dioxygenase bound to anthracene
Author: d. j. ferraro, a. l. okerlund, j. c. mowers, s. ramaswamy
Keywords: protien, rieske oxygenase
- 2hmn.pdb.
oxidoreductase 11-jul-06 2hmn
Fe
Title: crystal structure of the naphthalene 1,2-dioxygenase f352v mutant bound to anthracene.
Author: d. j. ferraro, a. l. okerlund, j. c. mowers, s. ramaswamy
Keywords: protien, rieske oxygenase
- 2hmo.pdb.
oxidoreductase 11-jul-06 2hmo
Fe
Title: crystal structure of naphthalene 1,2-dioxygenase bound to 3- nitrotoluene.
Author: d. j. ferraro, a. l. okerlund, j. c. mowers, s. ramaswamy
Keywords: protein, rieske oxygenase
- 2hoc.pdb.
lyase 14-jul-06 2hoc
Hg Cl F Zn
Title: crystal structure of the human carbonic anhydrase ii in complex with the 5-(4-amino-3-chloro-5- fluorophenylsulfonamido)-1,3,4-thiadiazole-2-sulfonamide inhibitor
Author: v. menchise, a. di fiore, g. de simone
- 2hq2.pdb.
oxidoreductase 18-jul-06 2hq2
Fe
Title: structure of the escherichia coli o157:h7 heme oxygenase chus in complex with heme
Author: m. d. l. suits, n. jaffer, z. jia, montreal-kingston bacterial structural genomics initiative (bsgi)
Keywords: heme, structural repeat, structural genomics, montreal-kingston bacterial structural genomics initiative, bsgi
- 2hqx.pdb.
transcription 19-jul-06 2hqx
Title: crystal structure of human p100 tudor domain conserved region
Author: m. zhao, z. j. liu, h. xu, j. yang, o. silvennoinen, b. c. wang, southeast collaboratory for structural genomics (secsg)
Keywords: proteolytic fragment, psi, structural genomics, southeast collaboratory for structural genomics, protein structure initiative, secsg
- 2hs6.pdb.
oxidoreductase 21-jul-06 2hs6
Title: crystal structure of the e291k mutant of 12- oxophytodienoate reductase 3 (opr3) from tomato
Author: c. breithaupt, t. clausen, r. huber
Keywords: flavoprotein, jasmonate biosynthesis
- 2hs8.pdb.
oxidoreductase 21-jul-06 2hs8
Title: crystal structure of the y364f mutant of 12- oxophytodienoate reductase 3 from tomato
Author: c. breithaupt, t. clausen, r. huber
Keywords: flavoprotein, jasmonate biosynthesis
- 2hsa.pdb.
oxidoreductase 21-jul-06 2hsa
Cl
Title: crystal structure of 12-oxophytodienoate reductase 3 (opr3) from tomato
Author: c. breithaupt, t. clausen, r. huber
Keywords: flavoprotein, jasmonate biosynthesis
- 2hte.pdb.
transferase 25-jul-06 2hte
U
Title: the crystal structure of spermidine synthase from p. falciparum in complex with 5'-methylthioadenosine
Author: w. qiu, a. dong, h. ren, h. wu, g. wasney, m. vedadi, j. lew, i. kozieradski, a. m. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, a. n. plotnikov, a. bochkarev, r. hui, structural genomics consortium (sgc)
Keywords: spermidine synthase, structural genomics consortium, sgc
- 2hw6.pdb.
transferase 01-aug-06 2hw6
Title: crystal structure of mnk1 catalytic domain
Author: r. jauch, m. c. wahl
Keywords: drug design, mnk1, phosphorylation
- 2hw7.pdb.
transferase 01-aug-06 2hw7
Zn
Title: crystal structure of mnk2-d228g in complex with staurosporine
Author: r. jauch, m. c. wahl
Keywords: drug, inhibitor, phosphorylation
- 2hxf.pdb.
transport protein 03-aug-06 2hxf
Mg
(cryo-electron microscopy)
Title: kif1a head-microtubule complex structure in amppnp-form
Author: m. kikkawa, n. hirokawa
- 2hxh.pdb.
transport protein 03-aug-06 2hxh
Mg
(cryo-electron microscopy)
Title: kif1a head-microtubule complex structure in adp-form
Author: m. kikkawa, n. hirokawa
- 2hxy.pdb.
hydrolase 04-aug-06 2hxy
Title: crystal structure of human apo-eif4aiii
Author: j. s. johansen, g. r. andersen
Keywords: atpase
- 2hym.pdb.
immune system 07-aug-06 2hym
(NMR, 10 structures)
Title: nmr based docking model of the complex between the human type i interferon receptor and human interferon alpha-2
Author: s. r. quadt-akabayov, j. h. chill, r. levy, n. kessler, j. anglister
- 2hz6.pdb.
signaling protein 08-aug-06 2hz6
Title: the crystal structure of human ire1-alpha luminal domain
Author: r. j. kaufman, z. xu, j. zhou
- 2i0x.pdb.
structural genomics, unknown function 11-aug-06 2i0x
Title: hypothetical protein pf1117 from pyrococcus furiosus
Author: l. q. chen, z. -q. fu, z. -j. liu, j. p. rose, b. c. wang, southeast collaboratory for structural genomics (secsg)
Keywords: secsg
- 2i14.pdb.
transferase 12-aug-06 2i14
Zn
Title: crystal structure of nicotinate-nucleotide pyrophosphorylase from pyrococcus furiosus
Author: d. h. shin, r. kim, s. -h. kim, berkeley structural genomics center (bsgc)
Keywords: crystal structure, ligand binding, phosphoribosylpyrophosphate, zn metal ion, structural genomics, psi, protein structure initiative, berkeley structural genomics center, bsgc
- 2i15.pdb.
structural genomics, unknown function 12-aug-06 2i15
Title: crystal structure of mpn423 from mycoplasma pneumoniae
Author: d. h. shin, h. yokota, r. kim, s. -h. kim, berkeley structural genomics center (bsgc)
Keywords: mpn423, hypothetical protien, crystal structure, all alpha structure, psi, protein structure initiative, berkeley structural genomics center, bsgc
- 2i1x.pdb.
transport protein 15-aug-06 2i1x
Title: bacteriorhodopsin/lipid complex, d96a mutant
Author: j. k. lanyi, b. schobert
Keywords: membrane protein, retinal protein, lipids, photoreceptor, haloarchaea, 7-transmembrane, serpentine, ion transport
- 2i20.pdb.
transport protein 15-aug-06 2i20
Title: bacteriorhodopsin/lipid complex, m state of d96a mutant
Author: j. k. lanyi, b. schobert
Keywords: membrane protein, retinal protein, lipids, photoreceptor, haloarchaea, 7-transmembrane, serpentine, ion transport
- 2i21.pdb.
transport protein 15-aug-06 2i21
Title: bacteriorhodopsin/lipid complex, t46v mutant
Author: j. k. lanyi, b. schobert
Keywords: membrane protein, retinal protein, lipids, photoreceptor, haloarchaea, 7-transmembrane, serpentine, ion transport
- 2i40.pdb.
transferase/cell cycle 21-aug-06 2i40
Cl
Title: cdk2/cyclin a complexed with a thiophene carboxamide inhibitor
Author: l. m. shewchuk
Keywords: cyclin, kinase
- 2i5b.pdb.
transferase 24-aug-06 2i5b
Title: the crystal structure of an adp complex of bacillus subtilis pyridoxal kinase provides evidence for the parralel emergence of enzyme activity during evolution
Author: j. a. newman, s. k. das, s. e. sedelnikova, d. w. rice
Keywords: pdxk, thid, ribokinase superfamily
- 2i5y.pdb.
virus/viral protein/immune system 26-aug-06 2i5y
Title: crystal structure of cd4m47, a scorpion-toxin mimic of cd4, in complex with hiv-1 yu2 gp120 envelope glycoprotein and anti-hiv-1 antibody 17b
Author: c. -c. huang, p. d. kwong
Keywords: gp120, yu2, scorpion toxin, cd4 mimic, cd4m47, antibody
- 2i60.pdb.
virus/viral protein/immune system 26-aug-06 2i60
Title: crystal structure of [phe23]m47, a scorpion-toxin mimic of cd4, in complex with hiv-1 yu2 gp120 envelope glycoprotein and anti-hiv-1 antibody 17b
Author: c. -c. huang, p. d. kwong
Keywords: gp120, yu2, scorpion toxin, cd4 mimic, [phe23]m47, antibody
- 2i6x.pdb.
hydrolase 29-aug-06 2i6x
Se
Title: the structure of a predicted had-like family hydrolase from porphyromonas gingivalis.
Author: m. e. cuff, k. e. mussar, h. li, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: had superfamily, hydrolase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2i79.pdb.
transferase 30-aug-06 2i79
Title: the crystal structure of the acetyltransferase of gnat family from streptococcus pneumoniae
Author: r. g. zhang, m. zhou, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: gnat family, acetyl coenzyme *a, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2i94.pdb.
protein binding 05-sep-06 2i94
Ca
(NMR, 10 structures)
Title: nmr structure of recoverin bound to rhodopsin kinase
Author: j. b. ames
Keywords: calcium, recoverin, phototransduction and rhodopsin kinse
- 2i9k.pdb.
transferase/dna 05-sep-06 2i9k
Title: engineered extrahelical base destabilization enhances sequence discrimination of dna methyltransferase m.hhai
Author: b. youngblood, f. k. shieh, s. de los rios, j. j. perona, n. o. reich
- 2i9z.pdb.
structural genomics, unknown function 06-sep-06 2i9z
Se
Title: structural genomics, the crystal structure of full-length spovg from staphylococcus epidermidis atcc 12228
Author: k. tan, n. maltseva, m. bargassa, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: spovg, staphylococcus epidermidis atcc 12228, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2ia2.pdb.
transcription 06-sep-06 2ia2
Se
Title: the crystal structure of a putative transcriptional regulator rha06195 from rhodococcus sp. rha1
Author: m. t. cymborowski, m. chruszcz, t. skarina, o. onopriyenko, a. savchenko, a. edwards, w. minor, midwest center for structural genomics (mcsg)
Keywords: transcriptional regulator, psi-2, structural genomics, protein structure initiative, midwest center for structural genomics, mcsg
- 2iac.pdb.
transferase 07-sep-06 2iac
Se
Title: mannose/sorbose specific iia subunit of phosphotransferase system from enterococcus faecalis.
Author: j. osipiuk, r. wu, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: phosphotransferase system, structural genomics, apc28805, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2iaf.pdb.
structural genomics, unknown function 07-sep-06 2iaf
Mg Se
Title: crystal structure of a fragment (residues 11 to 161) of l- serine dehydratase from legionella pneumophila
Author: b. nocek, r. mulligan, s. moy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: psi2, mad, structural genomics, l-serine dehydratase, protein structure initiative, midwest center for structural genomics
- 2iag.pdb.
isomerase 08-sep-06 2iag
Na Fe
Title: crystal structure of human prostacyclin synthase
Author: c. -w. chiang, h. -c. yeh, l. -h. wang, n. -l. chan
Keywords: class iii cytochorme p450, hemoprotein, cyp8a1
- 2iay.pdb.
structural genomics/unknown function 08-sep-06 2iay
Cl Se
Title: crystal structure of hypothetical protein (np_785678.1) from lactobacillus plantarum at 1.20 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: hypothetical protein, structural genomics, psi- 2, protein structure initiative, joint center for structural genomics, jcsg
- 2iaz.pdb.
structural genomics, unknown function 08-sep-06 2iaz
Se
Title: crystal structure of a conserved hypothetical protein sp1372 from streptococcus pneumoniae
Author: r. zhang, l. bigelow, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: streptococcus pneumoniae, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2ib5.pdb.
luminescent protein 10-sep-06 2ib5
Se
Title: structural characterization of a blue chromoprotein and its yellow mutant from the sea anemone cnidopus japonicus
Author: m. c. y. chan, i. bosanac, m. ikura
Keywords: alpha helix, chromoprotein, chromophore, blue, gfp-like protein
- 2ib6.pdb.
luminescent protein 10-sep-06 2ib6
Se
Title: structural characterization of a blue chromoprotein and its yellow mutant from the sea anemone cnidopus japonicus
Author: m. c. y. chan, i. bosanac, d. ho, g. prive, m. ikura
Keywords: alpha helix, chromoprotein, yellow, chromophore, gfp-like protein
- 2ibd.pdb.
structural genomics, unknown function 11-sep-06 2ibd
Mg Se
Title: crystal structure of probable transcriptional regulatory protein rha5900
Author: c. chang, e. evdokimova, o. kagan, a. savchenko, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: rhodococcus sp. rha1, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2ic5.pdb.
signaling protein 12-sep-06 2ic5
Cl Mg
Title: crystal structure of human rac3 grown in the presence of gpp(nh)p.
Author: e. ugochukwu, x. yang, y. zao, j. elkins, c. gileadi, n. burgess, s. colebrook, o. gileadi, o. fedorov, g. bunkoczi, m. sundstrom, c. arrowsmith, j. weigelt, a. edwards, f. von delft, d. doyle, structural genomics consortium (sgc)
Keywords: small gtp binding protein, p21 rac, ras- related c3 botulinum toxin substrate 3, signalling protein, gppnhp, structural genomics, structural genomics consortium, sgc
- 2icy.pdb.
transferase 13-sep-06 2icy
Title: crystal structure of a putative udp-glucose pyrophosphorylase from arabidopsis thaliana with bound udp- glucose
Author: j. g. mccoy, g. e. wesenberg, g. n. phillips jr. , e. bitto, c. a. bingman, center for eukaryotic structural genomics (cesg)
Keywords: udp, putative udp-glucose pyrophosphorylase, structural genomics functional follow-up study, structural genomics, protein structure initiative, psi, cesg, center for eukaryotic structural genomics
- 2id8.pdb.
hydrolase 14-sep-06 2id8
Cl B Ca
Title: crystal structure of proteinase k
Author: j. wang, m. dauter, z. dauter
- 2ift.pdb.
transferase 21-sep-06 2ift
Se
Title: crystal structure of putative methylase hi0767 from haemophilus influenzae. nesg target ir102.
Author: s. m. vorobiev, m. su, j. seetharaman, r. shastry, h. janjua, k. cunningham, l. c. ma, r. xiao, j. liu, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: methylase, y767_haein, hi0767, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium
- 2ifu.pdb.
endocytosis/exocytosis 21-sep-06 2ifu
Se
Title: crystal structure of a gamma-snap from danio rerio
Author: e. bitto, g. e. wesenberg, g. n. phillips jr. , j. g. mccoy, c. a. bingman, center for eukaryotic structural genomics (cesg)
Keywords: membrane fusion, snare complex disassembly, protein structure initiative, psi, center for eukaryotic structural genomics, cesg
- 2ifw.pdb.
hydrolase 21-sep-06 2ifw
Title: crystal structure of scytalido-glutamic peptidase with a transition state analog inhibitor
Author: b. pillai, m. m. cherney, k. hiraga, k. takada, k. oda, m. n. g. james
Keywords: enzyme-inhibitor complex
- 2ifx.pdb.
structural genomics/unknown function 21-sep-06 2ifx
Cl Se
Title: crystal structure of hypothetical protein (yp_295714.1) from ralstonia eutropha jmp134 at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: hypothetical protein, structural genomics, psi- 2, protein structure initiative, joint center for structural genomics, jcsg
- 2ig3.pdb.
oxygen storage/transport 22-sep-06 2ig3
Fe
Title: crystal structure of group iii truncated hemoglobin from campylobacter jejuni
Author: m. nardini, a. pesce, m. labarre, p. ascenzi, m. guertin, m. bolognesi
Keywords: 2-on-2 globin
- 2ig6.pdb.
structural genomics, unknown function 22-sep-06 2ig6
Se
Title: crystal structure of nimc/nima family protein (np_349178.1) from clostridium acetobutylicum at 1.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: nimc/nima family protein, structural genomics, psi-2, protein structure initiative, joint center for structural genomics, jcsg
- 2ig7.pdb.
transferase 22-sep-06 2ig7
U Se
Title: crystal structure of human choline kinase b
Author: w. m. rabeh, w. tempel, l. nedyalkova, g. wasney, r. landry, m. vedadi, c. h. arrowsmith, a. m. edwards, m. sundstrom, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: choline kinase, structural genomics, structural genomics consortium, sgc
- 2igk.pdb.
oxidoreductase 22-sep-06 2igk
Title: crystal structure of recombinant pyranose 2-oxidase
Author: c. divne
Keywords: gmc oxidoreductase, rossman fold, phbh fold, homotetramer, 8-alpha-(n3) histidyl flavinylation
- 2igm.pdb.
oxidoreductase 22-sep-06 2igm
Title: crystal structure of recombinant pyranose 2-oxidase h548n mutant
Author: c. divne
Keywords: gmc oxidoreductase, active-site mutant, h548n, rossman fold, phbh fold, homotetramer, 8-alpha-(n3) histidyl flavinylation
- 2ign.pdb.
oxidoreductase 22-sep-06 2ign
Title: crystal structure of recombinant pyranose 2-oxidase h167a mutant
Author: c. divne
Keywords: gmc oxidoreductase, h167a mutant, rossman fold, phbh fold, homotetramer, 8-alpha-(n3) histidyl flavinylation
- 2igo.pdb.
oxidoreductase 22-sep-06 2igo
F
Title: crystal structure of pyranose 2-oxidase h167a mutant with 2- fluoro-2-deoxy-d-glucose
Author: c. divne
Keywords: gmc oxidoreductase, h167a mutant, 2-fluoro- 2-deoxy-d-glucose, rossman fold, phbh fold, homotetramer, 8- alpha-(n3) histidyl flavinylation
- 2iik.pdb.
transferase 28-sep-06 2iik
Title: crystal structure of human peroxisomal acetyl-coa acyl transferase 1 (acaa1)
Author: e. papagrigoriou, c. johansson, c. smee, k. kavanagh, a. c. w. pike, m. sundstrom, j. weigelt, a. edwards, c. h. arrowsmith, o. gileadi, f. gorrec, c. umeano, f. von delft, u. oppermann, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2iip.pdb.
transferase 28-sep-06 2iip
Title: human nicotinamide n-methyltransferase
Author: g. bernstein, j. min, h. wu, w. tempel, h. zeng, p. loppnau, g. v. avvakumov, g. wasney, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: surface mutagenesis, mutant, methyltransferase, structural genomics, structural genomics consortium, sgc
- 2il1.pdb.
protein transport 02-oct-06 2il1
Mg U Ca
Title: crystal structure of a predicted human gtpase in complex with gdp
Author: j. wang, y. shen, w. tempel, r. landry, c. h. arrowsmith, a. m. edwards, m. sundstrom, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: rab, gdp, gtpase, predicted, structural genomics, structural genomics consortium, sgc
- 2ix0.pdb.
hydrolase 05-jul-06 2ix0
Mg Ca
Title: rnase ii
Author: c. frazao, c. e. mcvey, m. amblar, a barbas, c. vonrhein, c. m. arraiano, m. a. carrondo
Keywords: rna, csd, rnb, nuclease, rnase ii, hydrolase, rna-binding, exonuclease
- 2ix1.pdb.
hydrolase 05-jul-06 2ix1
Mg
Title: rnase ii d209n mutant
Author: c. frazao, c. e. mcvey, m. amblar, a. barbas, c. vonrhein, c. m. arraiano, m. a. carrondo
Keywords: rna, csd, rnb, nuclease, rnase ii, hydrolase, rna-binding, exonuclease
- 2ix2.pdb.
replication 05-jul-06 2ix2
Title: crystal structure of the heterotrimeric pcna from sulfolobus solfataricus
Author: g. j. williams, k. johnson, s. a. mcmahon, l. carter, m. oke, h. liu, g. l. taylor, m. f. white, j. h. naismith
Keywords: pcna, dna-binding, dna replication, replication
- 2iy9.pdb.
toxin 13-jul-06 2iy9
Title: crystal structure of the a-subunit of the ab5 toxin from e. coli
Author: a. w. paton, t. beddoe, c. m. thorpe, j. c. whisstock, m. c. j. wilce, j. rossjohn, u. m. talbot, j. c. paton
Keywords: shiga, coli, plasmid
- 2iyk.pdb.
hydrolase 18-jul-06 2iyk
Zn
Title: crystal structure of the upf2-interacting domain of nonsense mediated mrna decay factor upf1
Author: j. kadlec, d. guilligay, r. b. ravelli, s. cusack
Keywords: phosphorylation
- 2iz5.pdb.
metal transport 25-jul-06 2iz5
Title: function and structure of the molybdenum cofactor carrier protein mcp from chlamydomonas reinhardtii
Author: k. fischer, a. llamas, m. tejada-jimenez, n. schrader, j. kuper, r. r. mendel, e. fernandez, g. schwarz
Keywords: molybdenum cofactor, chlamydomonas rheinhardtii
- 2iz6.pdb.
metal transport 25-jul-06 2iz6
Title: structure of the chlamydomonas rheinhardtii moco carrier protein
Author: k. fischer, a. llamas, m. tejada-jimenez, n. schrader, j. kuper, r. r. mendel, e. fernandez, g. schwarz
Keywords: metal transport
- 2iz7.pdb.
metal transport 25-jul-06 2iz7
Title: structure of moco carrier protein from chlamydomonas reinhardtii
Author: k. fischer, a. llamas, m. tejada-jimenez, n. schrader, j. kuper, r. r. mendel, e. fernandez, g. schwarz
Keywords: metal transport
- 2j00.pdb.
ribosome 31-jul-06 2j00
Mg Zn
Title: structure of the thermus thermophilus 70s ribosome complexed with mrna, trna and paromomycin (part 1 of 4). this file contains the 30s subunit, mrna, a-, p- and e-site trnas and paromomycin for molecule i.
Author: m. selmer, c. m. dunham, f. v. murphy, a. weixlbaumer, s. petry, j. r. weir, a. c. kelley, v. ramakrishnan
Keywords: trna, paromomycin, mrna, translation
- 2j01.pdb.
ribosome 31-jul-06 2j01
Title: structure of the thermus thermophilus 70s ribosome complexed with mrna, trna and paromomycin (part 2 of 4). this file contains the 50s subunit from molecule i.
Author: m. selmer, c. m. dunham, f. v. murphy, a. weixlbaumer, s. petry, j. r. weir, a. c. kelley, v. ramakrishnan
Keywords: trna, paromomycin, mrna, translation
- 2j02.pdb.
ribosome 31-jul-06 2j02
Mg Zn
Title: structure of the thermus thermophilus 70s ribosome complexed with mrna, trna and paromomycin (part 3 of 4) this file contains the 30s subunit, mrna, a-, p- and e-site trnas and paromomycin for molecule ii.
Author: m. selmer, c. m. dunham, f. v. murphy, a. weixlbaumer, s. petry, j. r. weir, a. c. kelley, v. ramakrishnan
Keywords: trna, paromomycin, mrna, translation
- 2j03.pdb.
ribosome 31-jul-06 2j03
Title: structure of the thermus thermophilus 70s ribosome complexed with mrna, trna and paromomycin (part 4 of 4). this file contains the 50s subunit from molecule ii.
Author: m. selmer, c. m. dunham, f. v. murphy, a. weixlbaumer, s. petry, j. r. weir, a. c. kelley, v. ramakrishnan
Keywords: trna, paromomycin, mrna, translation
- 2j0v.pdb.
nucleotide-binding protein 07-aug-06 2j0v
Mg
Title: the crystal structure of arabidopsis thaliana rac7-rop9: the first ras superfamily gtpase from the plant kingdom
Author: c. g. sormo, i. leiros, t. brembu, p. winge, v. os, a. m. bones
Keywords: atrac7, membrane, palmitate, rho gtpase, abscisic acid signaling pathway, dna binding protein nucleotide-binding, arabidopsis thaliana, lipoprotein, gtp-binding, ras superfamily
- 2j13.pdb.
hydrolase 08-aug-06 2j13
Zn As
Title: structure of a family 4 carbohydrate esterase from bacillus anthracis
Author: t. m. gloster, l. oberbarnscheidt, e. j. taylor, g. j. davies
Keywords: peptidoglycan, bacillus anthracis, hydrolase, bacterial cell wall, carbohydrate esterase
- 2j2c.pdb.
hydrolase 16-aug-06 2j2c
Mg
Title: crystal structure of human cytosolic 5'-nucleotidase ii (nt5c2, cn-ii)
Author: k. wallden, p. stenmark, c. arrowsmith, h. berglund, r. busam, r. collins, a. edwards, m. ehn, s. flodin, a. flores, s. graslund, m. hammarstrom, b. m. hallberg, l. holmberg schiavone, m. hogbom, t. karlberg, t. kotenyova, p. loppnau, a. magnusdottir, p. nilsson-ehle, t. nyman, d. ogg, c. persson, j. sagemark, m. sundstrom, j. uppenberg, a. g. thorsell, s. van den berg, j. weigelt, m. welin, p. nordlund
Keywords: allosteric enzyme, gmp-imp specific nucleotidase, high km 5-prime nucleotidase, cn-ii, nt5c2, hydrolase, polymorphism, cytosolic purine 5-prime nucleotidase
- 2j3h.pdb.
oxidoreductase 21-aug-06 2j3h
Title: crystal structure of arabidopsis thaliana double bond reductase (at5g16970)-apo form
Author: b. youn, s. kim, s. moinuddin, c. lee, d. bedgar, a. harper, l. davin, n. lewis, c. kang
Keywords: nadp, apo form, oxidoreductase, arabidopsis thaliana
- 2j3i.pdb.
oxidoreductase 21-aug-06 2j3i
Title: crystal structure of arabidopsis thaliana double bond reductase (at5g16970)-binary complex
Author: b. youn, s. kim, s. moinuddin, c. lee, d. bedgar, a. harper, l. davin, n. lewis, c. kang
Keywords: binary complex nadp, apo form, oxidoreductase, arabidopsis thaliana
- 2j3j.pdb.
oxidoreductase 21-aug-06 2j3j
Title: crystal structure of arabidopsis thaliana double bond reductase (at5g16970)-ternary complex i
Author: b. youn, s. kim, s. moinuddin, c. lee, d. bedgar, a. harper, l. davin, n. lewis, c. kang
Keywords: arabidopsis thaliana, nadp, oxidoreductase, ternary complex, double bond reductase (at5g16970)
- 2j3k.pdb.
oxidoreductase 22-aug-06 2j3k
Title: crystal structure of arabidopsis thaliana double bond reductase (at5g16970)-ternary complex ii
Author: b. youn, s. kim, s. moinuddin, c. lee, d. bedgar, a. harper, l. davin, n. lewis, c. kang
Keywords: 4-hydroxy-2- nonenal, nadp, oxidoreductase, ternary complex ii, double bond reductase (at5g16970)
- 2j47.pdb.
inhibitor 25-aug-06 2j47
Title: bacteroides thetaiotaomicron gh84 o-glcnacase in complex with a imidazole-pugnac hybrid inhibitor
Author: r. j. dennis, g. j. davies
Keywords: imidazole, gh84, pugnac, enzyme, inhibition, inhibitor
- 2j51.pdb.
transferase 08-sep-06 2j51
F
Title: crystal structure of human ste20-like kinase bound to 5- amino-3-((4-(aminosulfonyl)phenyl)amino)-n-(2,6- difluorophenyl)-1h-1,2,4-triazole-1-carbothioamide
Author: a. c. w. pike, p. rellos, o. fedorov, t. keates, e. salah, p. savitsky, e. papagrigoriou, a. p. turnbull, j. e. debreczeni, f. von delft, c. arrowsmith, a. edwards, j. weigelt, m. sundstrom, s. knapp
Keywords: atp-binding, phosphorylation, muscle development, kinase, apoptosis, transferase, coiled coil, germinal centre kinase, serine/threonine kinase 2, nucleotide-binding, alternative splicing
- 2j5h.pdb.
hormone/growth factor 13-sep-06 2j5h
(NMR, 10 structures)
Title: nmr analysis of mouse cripto cfc domain
Author: l. calvanese, a. saporito, d. marasco, g. d'auria, g. minchiotti, c. pedone, l. paolillo, l. falcigno, m. ruvo
Keywords: egf-cfc family, cripto, tumour progression, cysteine-rich domains, hormone/growth factor complex
- 2j5o.pdb.
recombination 19-sep-06 2j5o
(NMR, 20 sructures)
Title: pseudomonas aeruginosa ftsk gamma domain
Author: v. sivanathan, m. d. allen, c. debekker, r. baker, l. arciszewska, s. m. freund, m. bycroft, j. lowe, d. j. sherratt
Keywords: kops, xercd, recombination, dna segregation, bacterial cell division
- 2j5p.pdb.
recombination 19-sep-06 2j5p
(NMR, 20 structures)
Title: e. coli ftsk gamma domain
Author: v. sivanathan, m. d. allen, c. debekker, r. baker, l. arciszewska, s. m. freund, m. bycroft, j. lowe, d. j. sherratt
Keywords: kops, xercd, recombination, dna segregation, bacterial cell division
- 2j6h.pdb.
transferase 28-sep-06 2j6h
Title: e. coli glucosamine-6-p synthase in complex with glucose-6p and 5-oxo-l-norleucine
Author: s. mouilleron, b. golinelli-pimpaneau
Keywords: n terminal nucleophile, direct protein sequencing, glutamine amidotransferase, glucosamine 6-phosphate synthase, transferase, aminotransferase, amidotransferase, ammonia channeling, 5-oxo-l-norleucin...
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