Recent PDB releases or updates: week of 4 August 2006
- 1c8r.pdb.
proton transport 29-jul-99 1c8r
Title: bacteriorhodopsin d96n br state at 2.0 a resolution
Author: h. luecke
Keywords: membrane protein, retinal protein, lipids, photoreceptor, haloarchaea, d96n br state, ion transport, merohedral twinning
- 1cn7.pdb.
ribosome 26-may-99 1cn7
(NMR, 20 structures)
Title: yeast ribosomal protein l30
Author: h. mao, j. r. willamson
Keywords: ribosomal protein, auto-regulation of pre-mrna splicing and mrna translation
- 1f0v.pdb.
hydrolase/dna 17-may-00 1f0v
Title: crystal structure of an rnase a dimer displaying a new type of 3d domain swapping
Author: y. s. liu, g. gotte, m. libonati, d. s. eisenberg
Keywords: crystal, structure, x-ray, ribonuclease, bovine pancreas
- 1j8g.pdb.
ribonucleic acid 21-may-01 1j8g
Sr Na Ca
Title: x-ray analysis of a rna tetraplex r(uggggu)4 at ultra-high resolution
Author: j. deng, y. xiong, m. sundaralingam
Keywords: x-ray, ultra-high resolution, sr ions, u tetrad, octaplex
- 1rrh.pdb.
oxidoreductase 08-dec-03 1rrh
Fe
Title: soybean lipoxygenase (lox-3) at ambient temperatures at 2.0 a resolution
Author: o. y. borbulevych, j. jankun, e. skrzypczak-jankun
Keywords: iron metalloprotein, lipoxygenase
- 1rrl.pdb.
oxidoreductase 08-dec-03 1rrl
Fe
Title: soybean lipoxygenase (lox-3) at 93k at 2.0 a resolution
Author: o. y. borbulevych, j. jankun, e. skrzypczak-jankun
Keywords: iron metalloprotein, lipoxygenase
- 1s8d.pdb.
immune system 02-feb-04 1s8d
Title: structural basis for degenerate recognition of hiv peptide variants by cytotoxic lymphocyte, variant sl9-3a
Author: e. martinez-hackert, n. anikeeva, s. a. kalams, b. d. walker, w. a. hendrickson, y. sykulev
Keywords: tcr, t-cell receptor
- 1t1w.pdb.
immune system 19-apr-04 1t1w
Title: structural basis for degenerate recognition of hiv peptide variants by cytotoxic lymphocyte, variant sl9-3f6i8v
Author: e. martinez-hackert, n. anikeeva, s. a. kalams, b. d. walker, w. a. hendrickson, y. sykulev
Keywords: t-cell receptor
- 1t1x.pdb.
immune system 19-apr-04 1t1x
Title: structural basis for degenerate recognition of hiv peptide variants by cytotoxic lymphocyte, variant sl9-4l
Author: e. martinez-hackert, n. anikeeva, s. a. kalams, b. d. walker, w. a. hendrickson, y. sykulev
Keywords: t-cell receptor
- 1t1y.pdb.
immune system 19-apr-04 1t1y
Title: structural basis for degenerate recognition of hiv peptide variants by cytotoxic lymphocyte, variant sl9-5v
Author: e. martinez-hackert, n. anikeeva, s. a. kalams, b. d. walker, w. a. hendrickson, y. sykulev
Keywords: t-cell receptor
- 1t1z.pdb.
immune system 19-apr-04 1t1z
Title: structural basis for degenerate recognition of hiv peptide variants by cytotoxic lymphocyte, variant sl9-6a
Author: e. martinez-hackert, n. anikeeva, s. a. kalams, b. d. walker, w. a. hendrickson, y. sykulev
Keywords: t-cell receptor
- 1t20.pdb.
immune system 19-apr-04 1t20
Title: structural basis for degenerate recognition of hiv peptide variants by cytotoxic lymphocyte, variant sl9-6i
Author: e. martinez-hackert, n. anikeeva, s. a. kalams, b. d. walker, w. a. hendrickson, y. sykulev
Keywords: t-cell receptor
- 1t21.pdb.
immune system 19-apr-04 1t21
Title: structural basis for degenerate recognition of hiv peptide variants by cytotoxic lymphocyte, variant sl9, monoclinic crystal
Author: e. martinez-hackert, n. anikeeva, s. a. kalams, b. d. walker, w. a. hendrickson, y. sykulev
Keywords: t-cell receptor
- 1t22.pdb.
immune system 19-apr-04 1t22
Title: structural basis for degenerate recognition of hiv peptide variants by cytotoxic lymphocyte, variant sl9, orthorhombic crystal
Author: e. martinez-hackert, n. anikeeva, s. a. kalams, b. d. walker, w. a. hendrickson, y. sykulev
Keywords: t-cell receptor
- 1vm9.pdb.
electron transport 13-sep-04 1vm9
Mg Fe
Title: the x-ray structure of the cys84ala cys85ala double mutant of the [2fe-2s] ferredoxin subunit of toluene-4- monooxygenase from pseudomonas mendocina kr1
Author: g. e. wesenberg, d. w. smith, g. n. phillips jr. , c. a. bingman, s. t. m. allard, l. a. moe, b. g. fox, center for eukaryotic structural genomics (cesg)
Keywords: cesg, protein structure initiative, psi, ferredoxin, fes, [2fe-2s] cluster, rieske protein, toluene-4-monooxygenase subunit, center for eukaryotic structural genomics
- 1x1q.pdb.
lyase 11-apr-05 1x1q
Cl Se
Title: crystal structure of tryptophan synthase beta chain from thermus thermophilus hb8
Author: y. asada, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
Keywords: thermus thermophilus, riken structural genomics/proteomics initiative, rsgi, nppsfa, national project on protein structural and functional analyses
- 1x2o.pdb.
deoxyribonucleic acid 26-apr-05 1x2o
(NMR)
Title: nmr solution structures of a dna dodecamer containing a tandem gt mismatches using noe and residual dipolar couplings
Author: f. alvarez-salgado, h. desvaux, y. boulard
Keywords: rdc, deoxyribonucleic acid, liquid crystal
- 1x2s.pdb.
deoxyribonucleic acid 26-apr-05 1x2s
(NMR)
Title: nmr solution structures of a dna dodecamer containing a tandem gt mismatches using noe and residual dipolar couplings
Author: f. alvarez-salgado, h. desvaux, y. boulard
Keywords: rdc, deoxyribonucleic acid, liquid crystal
- 1x2u.pdb.
deoxyribonucleic acid 26-apr-05 1x2u
(NMR)
Title: nmr solution structures of a dna dodecamer containing a tandem gt mismatches using noe and residual dipolar couplings
Author: f. alvarez-salgado, h. desvaux, y. boulard
Keywords: rdc, deoxyribonucleic acid
- 1x2v.pdb.
deoxyribonucleic acid 26-apr-05 1x2v
(NMR)
Title: nmr solution structures of a dna dodecamer containing a tandem gt mismatches using noe and residual dipolar couplings
Author: f. alvarez-salgado, h. desvaux, y. boulard
Keywords: rdc, deoxyribonucleic acid, liquid crystal
- 1x2x.pdb.
deoxyribonucleic acid 26-apr-05 1x2x
(NMR)
Title: nmr solution structures of a dna dodecamer containing a tandem gt mismatches using noe and residual dipolar couplings
Author: f. alvarez-salgado, h. desvaux, y. boulard
Keywords: rdc, deoxyribonucleic acid, liquid crystal, tandem gt mismatches
- 1x2y.pdb.
deoxyribonucleic acid 26-apr-05 1x2y
(NMR)
Title: nmr solution structures of a dna dodecamer containing a tandem gt mismatches using noe and residual dipolar couplings
Author: f. alvarez-salgado, h. desvaux, y. boulard
Keywords: rdc, deoxyribonucleic acid, liquid crystal, tandem gt mismatches
- 1x2z.pdb.
deoxyribonucleic acid 26-apr-05 1x2z
(NMR)
Title: nmr solution structures of a dna dodecamer containing a tandem gt mismatches using noe and residual dipolar couplings
Author: f. alvarez-salgado, h. desvaux, y. boulard
Keywords: rdc, deoxyribonucleic acid, liquid crystal, tandem gt mismatches
- 1x30.pdb.
deoxyribonucleic acid 26-apr-05 1x30
(NMR)
Title: nmr solution structures of a dna dodecamer containing a tandem gt mismatches using noe and residual dipolar couplings
Author: f. alvarez-salgado, h. desvaux, y. boulard
Keywords: rdc, deoxyribonucleic acid, liquid crystal, tandem gt mismatches
- 1z3r.pdb.
virus/viral protein 14-mar-05 1z3r
(NMR, 15 structures)
Title: solution structure of the omsk hemhorraghic fever envelope protein domain iii
Author: d. e. volk, l. chavez, d. w. beasley, a. d. barrett, d. g. gorenstein
Keywords: omsk hemorrhagic fever, ohf, envelope protein
- 1z63.pdb.
hydrolase/dna complex 21-mar-05 1z63
Se
Title: sulfolobus solfataricus swi2/snf2 atpase core in complex with dsdna
Author: h. duerr, c. koerner, m. mueller, v. hickmann, k. p. hopfner
- 1z72.pdb.
transcription regulator 23-mar-05 1z72
Mg Se
Title: structure of a putative transcriptional regulator from streptococcus pneumoniae
Author: m. e. cuff, m. zhou, j. abdulla, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: transcriptional regulator, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg
- 1zg3.pdb.
plant protein, transferase 20-apr-05 1zg3
Title: crystal structure of the isoflavanone 4'-o- methyltransferase complexed with sah and 2,7,4'- trihydroxyisoflavanone
Author: c. -j. liu, b. e. deavours, s. richard, j. -l. ferrer, r. a. dixon, j. p. noel
Keywords: isoflavanone 4'-o-methyltransferase
- 1zga.pdb.
plant protein, transferase 20-apr-05 1zga
Title: crystal structure of isoflavanone 4'-o-methyltransferase complexed with (+)-6a-hydroxymaackiain
Author: c. -j. liu, b. e. deavours, s. richard, j. -l. ferrer, r. a. dixon, j. p. noel
Keywords: isoflavanone 4'-o-methyltransferase
- 1zgj.pdb.
plant protein, transferase 21-apr-05 1zgj
Title: crystal structure of isoflavanone 4'-o-methyltransferase complexed with (+)-pisatin
Author: c. -j. liu, b. e. deavours, s. richard, j. -l. ferrer, r. a. dixon, j. p. noel
Keywords: isoflavanone 4'-o-methyltransferase
- 1zhf.pdb.
plant protein, transferase 25-apr-05 1zhf
Title: crystal structure of selenomethionine substituted isoflavanone 4'-o-methyltransferase
Author: c. -j. liu, b. e. deavours, s. richard, j. -l. ferrer, r. a. dixon, j. p. noel
Keywords: rossman fold
- 1zo4.pdb.
oxidoreductase 12-may-05 1zo4
Fe
Title: crystal structure of a328s mutant of the heme domain of p450bm-3
Author: a. hegda, b. chen, d. c. haines, m. bondlela, d. mullin, s. e. graham, d. r. tomchick, m. machius, j. a. peterson
Keywords: hemeprotein a328s
- 1zo9.pdb.
oxidoreductase 12-may-05 1zo9
Fe
Title: crystal structure of the wild type heme domain of p450bm-3 with n-palmitoylmethionine
Author: a. hegda, b. chen, d. r. tomchick, m. bondlela, d. c. haines, n. schaffer, m. machius, s. e. graham, j. a. peterson
Keywords: wild type heme protein
- 1zoa.pdb.
oxidoreductase 12-may-05 1zoa
Fe
Title: crystal structure of a328v mutant of the heme domain of p450bm-3 with n-palmitoylglycine
Author: a. hegda, b. chen, d. c. haines, m. bondlela, d. mullin, s. e. graham, d. r. tomchick, m. machius, j. a. peterson
Keywords: hemeprotein a328v
- 2a3l.pdb.
hydrolase 25-jun-05 2a3l
Zn
Title: x-ray structure of adenosine 5'-monophosphate deaminase from arabidopsis thaliana in complex with coformycin 5'- phosphate
Author: b. w. han, g. e. wesenberg, g. n. phillips jr. , e. bitto, c. a. bingman, s. t. m. allard, center for eukaryotic structural genomics (cesg)
Keywords: at2g38280, adenosine 5'-monophosphate deaminase, coformycin 5'-phosphate, structural genomics, protein structure initiative, psi, cesg, center for eukaryotic structural genomics
- 2aco.pdb.
lipid transport, membrane protein 19-jul-05 2aco
Title: xray structure of blc dimer in complex with vaccenic acid
Author: v. campanacci, r. e. bishop, l. reese, s. blangy, m. tegoni, c. cambillau
Keywords: fatty acid, e.coli
- 2aei.pdb.
hydrolase 22-jul-05 2aei
F Ca As
Title: crystal structure of a ternary complex of factor viia/tissue factor and 2-[[6-[3-(aminoiminomethyl)phenoxy]- 3,5-difluro-4-[(1-methyl-3-phenylpropyl)amino]-2- pyridinyl]oxy]-benzoic acid
Author: m. adler, m. whitlow
Keywords: serine protease, thrombosis, gla, pyridine, benzamidine, tissue factor, cofactor, enzyme inhibitor complex
- 2af5.pdb.
de novo protein, immune system 25-jul-05 2af5
Title: 2.5a x-ray structure of engineered ospa protein
Author: k. makabe, d. mcelheny, v. tereshko, a. hilyard, a. koide, s. koide
Keywords: beta-hairpin, repeat protein
- 2ahp.pdb.
de novo protein 28-jul-05 2ahp
Title: gcn4 leucine zipper, mutation of lys15 to epsilon-azido-lys
Author: w. s. horne, m. r. ghadiri
Keywords: coiled coil, azide
- 2aih.pdb.
hydrolase 29-jul-05 2aih
Cl
(NMR, 20 structures)
Title: 1h-nmr solution structure of a trypsin/chymotrypsin bowman- birk inhibitor from lens culinaris.
Author: e. m. ragg, v. galbusera, a. scarafoni, a. negri, g. tedeschi, a. consonni, f. sessa, m. duranti
Keywords: two-strands beta-sheet
- 2amz.pdb.
plant protein 10-aug-05 2amz
Title: agglutinin from abrus precatorius (apa i)
Author: a. bagaria, k. surendranath, u. a. ramagopal, a. a. karande, s. ramakumar
Keywords: immunotoxin, agglutinin abrin
- 2ap7.pdb.
antibiotic 15-aug-05 2ap7
(NMR, 20 structures)
Title: solution structure of bombinin h2 in dpc micelles
Author: k. zangger, a. jilek, l. khatai
Keywords: dpc micelle
- 2ap8.pdb.
antibiotic 15-aug-05 2ap8
(NMR, 20 structures)
Title: solution structure of bombinin h4 in dpc micelles
Author: k. zangger, a. jilek, l. khatai
Keywords: dpc micelle, d-ile
- 2aq9.pdb.
transferase/transferase inhibitor 17-aug-05 2aq9
Title: structure of e. coli lpxa with a bound peptide that is competitive with acyl-acp
Author: a. h. williams, r. m. immormino, d. t. gewirth, c. r. raetz
Keywords: peptide inhibitor, acyl acp, acp, udp-glcnac, lipid a
- 2ar6.pdb.
sugar binding protein 19-aug-05 2ar6
Mn Ca
Title: pterocarpus angolensis lectin (pal) in complex with the pentasaccharide m592
Author: l. buts, a. garcia-pino, a. imberty, n. amiot, g. j. boons, s. beeckmans, w. # versees, l. wyns, r. loris
Keywords: carbohydrate recognition
- 2arb.pdb.
sugar binding protein 19-aug-05 2arb
Mn Ca
Title: pterocarpus angolensis lectin (pal) in complex with the glcnac(beta1-2)man disaccharide
Author: l. buts, a. garcia-pino, a. imberty, n. amiot, g. -j. boons, w. versees, j. lah, s. beeckmans, l. wyns, r. loris
Keywords: carbohydrate recognition
- 2are.pdb.
sugar binding protein 19-aug-05 2are
Mn Ca
Title: pterocarpus angolensis lectin (pal) in complex with d- mannose (anomeric mixture)
Author: l. buts, a. garcia-pino, a. imberty, n. amiot, g. -j. boons, w. versees, j. lah, s. beeckmans, l. wyns, r. loris
Keywords: carbohydrate recognition
- 2arx.pdb.
sugar binding protein 22-aug-05 2arx
Mn Ca
Title: pterocarpus angolensis seed lectin in complex with the decasaccharide na2f
Author: l. buts, a. garcia-pino, a. imberty, n. amiot, g. -j. boons, j. lah, w. versees, l. wyns, r. loris
Keywords: carbohydrate, legume lectin
- 2asn.pdb.
transport protein 23-aug-05 2asn
Fe
Title: crystal structure of d1a mutant of nitrophorin 2 complexed with imidazole
Author: a. weichsel, r. e. berry, f. a. walker, w. r. montfort
Keywords: lipocalin, ferric heme, imidazole
- 2azx.pdb.
ligase/rna 12-sep-05 2azx
Mg Se
Title: charged and uncharged trnas adopt distinct conformations when complexed with human tryptophanyl-trna synthetase
Author: x. l. yang, f. j. otero, k. l. ewalt, j. liu, m. a. swairjo, c. kohrer, u. l. rajbhandary, r. j. skene, d. e. mcree, p. schimmel
Keywords: association complex and dissociation complex
- 2b39.pdb.
immune system 20-sep-05 2b39
Title: structure of mammalian c3 with an intact thioester at 3a resolution
Author: f. fredslund, l. jenner, l. b. husted, j. nyborg, g. r. andersen, l. sottrup-jensen
Keywords: thioester, immune defense
- 2b7r.pdb.
oxidoreductase 05-oct-05 2b7r
Na Fe
Title: structure of e378d mutant flavocytochrome c3
Author: k. l. pankhurst, c. g. mowat, e. l. rothery, c. s. miles, m. d. walkinshaw, g. a. reid, s. k. chapman
Keywords: fumarate reductase, proton delivery
- 2b7s.pdb.
oxidoreductase 05-oct-05 2b7s
Na Fe
Title: r381k mutant of flavocytochrome c3
Author: k. l. pankhurst, c. g. mowat, e. l. rothery, c. s. miles, m. d. walkinshaw, g. a. reid, s. k. chapman
Keywords: fumarate reductase, proton delivery
- 2b7x.pdb.
hydrolase 05-oct-05 2b7x
Title: sequential reorganization of beta-sheet topology by insertion of a single strand
Author: m. sagermann, b. w. matthews
Keywords: protein design, structural switches, tandem repeat
- 2bdu.pdb.
hydrolase 20-oct-05 2bdu
Se
Title: x-ray structure of a cytosolic 5'-nucleotidase iii from mus musculus mm.158936
Author: g. e. wesenberg, g. n. phillips jr. , b. w. han, e. bitto, c. a. bingman, e. bae, center for eukaryotic structural genomics (cesg)
Keywords: cytosolic 5'-nucleotidase iii, nt5c3 protein, aah38029, bc038029, mm.158936, structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg
- 2bei.pdb.
transferase 24-oct-05 2bei
Se
Title: x-ray structure of thialysine n-acetyltransferase (ssat2) from homo sapiens
Author: g. e. wesenberg, g. n. phillips jr. , b. w. han, e. bitto, c. a. bingman, e. bae, center for eukaryotic structural genomics (cesg)
Keywords: bc011751, aah11751, thialysine n-acetyltransferase, structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg, center for eukaryotic structural genomics
- 2bp0.pdb.
oxidoreductase 17-apr-05 2bp0
Cu Zn
Title: m168l mutant of nitrite reductase from alcaligenes xylosoxidans
Author: m. a. hough, m. j. ellis, s. antonyuk, r. w. strange, g. sawers, r. r. eady, s. s. hasnain
Keywords: nitrite reductase, electron transfer, m168l mutant, nitrate assimilation, periplasmic
- 2bp8.pdb.
oxidoreductase 17-apr-05 2bp8
Cu Zn
Title: m168q structure of nitrite reductase from alcaligenes xylosoxidans
Author: m. a. hough, m. j. ellis, s. antonyuk, r. w. strange, g. sawers, r. r. eady, s. s. hasnain
Keywords: nitrite reductase, m168q, mutant, electron transfer, nitrate assimilation, periplasmic
- 2c2f.pdb.
dna-binding protein 28-sep-05 2c2f
Zn Fe
Title: dps from deinococcus radiodurans
Author: c. v. romao, e. mitchell, s. mcsweeney
Keywords: iron, deinococcus radiodurans, dna-binding protein
- 2c2u.pdb.
dna-binding protein 30-sep-05 2c2u
Zn Fe
Title: dps from deinococcus radiodurans
Author: c. v. romao, e. mitchell, s. mcsweeney
Keywords: iron, deinococcus radiodurans, dna-binding
- 2c7g.pdb.
oxidoreductase 24-nov-05 2c7g
Na
Title: fpra from mycobacterium tuberculosis: his57gln mutant
Author: a. pennati, a. razeto, m. de rosa, v. pandini, m. a. vanoni, a. aliverti, a. mattevi, a. coda, g. zanetti
Keywords: flavoprotein, nadp, oxidoreductase, tuberculosis, nap+ derivative
- 2ce0.pdb.
electron transfer 01-feb-06 2ce0
Fe
Title: structure of oxidized arabidopsis thaliana cytochrome 6a
Author: m. j. marcaida, b. g. schlarb-ridley, j. a. r. worrall, j. wastl, t. j. evans, d. s. bendall, b. f. luisi, c. j. howe
Keywords: electron transport, heme, iron, thylakoid, photosynthesis, metal-binding, electron transfer
- 2ce1.pdb.
electron transfer 02-feb-06 2ce1
Fe
Title: structure of reduced arabidopsis thaliana cytochrome 6a
Author: m. j. marcaida, b. g. schlarb-ridley, j. a. r. worrall, j. wastl, t. j. evans, d. s. bendall, b. f. luisi, c. j. howe
Keywords: electron transport, heme, iron, thylakoid, photosynthesis, metal-binding, electron transfer
- 2cfc.pdb.
oxidoreductase 19-feb-06 2cfc
Title: structural basis for stereo selectivity in the (r)- and (s)-hydroxypropylethane thiosulfonate dehydrogenases
Author: a. m. krishnakumar, b. p. nocek, d. d. clark, s. a. ensign, j. w. peters
Keywords: oxidoreductase
- 2cfm.pdb.
ligase 22-feb-06 2cfm
Mg Se
Title: atp-dependent dna ligase from pyrococcus furiosus
Author: h. nishida, y. ishino, k. morikawa
Keywords: cell cycle, cell division, dna damage, dna recombination, dna repair, dna replication, ligase, nucleotide-binding
- 2cn5.pdb.
transferase 18-may-06 2cn5
Cl Mg
Title: crystal structure of human chk2 in complex with adp
Author: a. w. oliver, l. h. pearl
Keywords: disease mutation, magnesium, metal-binding, nuclear protein, nucleotide- binding, proto-oncogene, serine/threonine-protein kinase, transferase
- 2cn8.pdb.
transferase 18-may-06 2cn8
Mg
Title: crystal structure of human chk2 in complex with debromohymenialdisine
Author: a. w. oliver, l. h. pearl
Keywords: nucleotide-binding, hypothetical protein
- 2cqs.pdb.
transferase 20-may-05 2cqs
Title: crystal structure of cellvibrio gilvus cellobiose phosphorylase crystallized from ammonium sulfate
Author: m. hidaka, m. kitaoka, k. hayashi, t. wakagi, h. shoun, s. fushinobu
Keywords: (alpha/alpha)6 barrel
- 2cqt.pdb.
transferase 20-may-05 2cqt
Title: crystal structure of cellvibrio gilvus cellobiose phosphorylase crystallized from sodium/potassium phosphate
Author: m. hidaka, m. kitaoka, k. hayashi, t. wakagi, h. shoun, s. fushinobu
Keywords: (alpha/alpha)6 barrel
- 2csu.pdb.
structural genomics, unknown function 23-may-05 2csu
Se
Title: crystal structure of ph0766 from pyrococcus horikoshii ot3
Author: m. sugahara, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
Keywords: structural genomics, ph0766, riken structural genomics/proteomics initiative, rsgi, nppsfa, national project on protein structural and functional analyses
- 2cyu.pdb.
transferase 08-jul-05 2cyu
(NMR, 20 structures)
Title: nmr structure of a downhill folding protein
Author: v. munoz, m. sadqi
Keywords: downhill folding protein
- 2d0d.pdb.
hydrolase 01-aug-05 2d0d
Cl
Title: crystal structure of a meta-cleavage product hydrolase (cumd) a129v mutant
Author: s. y. jun, s. fushinobu, h. nojiri, t. omori, h. shoun, t. wakagi
Keywords: beta-ketolase, meta-cleavage product hydrolase, substrate specificity, cumene degradation, polychlorinated biphenyl degradation, pcb
- 2d3u.pdb.
transferase 02-oct-05 2d3u
Title: x-ray crystal structure of hepatitis c virus rna dependent rna polymerase in complex with non-nucleoside analogue inhibitor
Author: b. k. biswal, m. wang, m. m. cherney, l. chan, c. g. yannopoulos, d. bilimoria, j. bedard, m. n. g. james
Keywords: rna-dependent rna polymerase, enzyme inhibition, x-ray crystallography
- 2d3z.pdb.
transferase 04-oct-05 2d3z
F
Title: x-ray crystal structure of hepatitis c virus rna-dependent rna polymerase in complex with non-nucleoside analogue inhibitor
Author: b. k. biswal, m. wang, m. m. cherney, l. chan, c. g. yannopoulos, d. bilimoria, j. bedard, m. n. g. james
Keywords: rna polymerase, enzyme inhibition, x-ray crystallography
- 2d41.pdb.
transferase 05-oct-05 2d41
Title: x-ray crystal structure of hepatitis c virus rna-dependent rna polymerase in complex with non-nucleoside inhibitor
Author: b. k. biswal, m. wang, m. m. cherney, l. chan, c. g. yannopoulos, d. bilimoria, j. bedard, m. n. g. james
Keywords: rna polymerase, enzyme inhibition, x-ray crystallography
- 2d74.pdb.
translation 16-nov-05 2d74
Zn
Title: crystal structure of translation initiation factor aif2betagamma heterodimer
Author: m. sokabe, m. yao, n. sakai, s. toya, i. tanaka
- 2dcu.pdb.
translation 16-jan-06 2dcu
Mg Zn
Title: crystal structure of translation initiation factor aif2betagamma heterodimer with gdp
Author: m. sokabe, m. yao, n. sakai, s. toya, i. tanaka
- 2de2.pdb.
hydrolase 08-feb-06 2de2
Title: crystal structure of desulfurization enzyme dszb
Author: w. c. lee, t. ohshiro, t. matsubara, y. izumi, m. tanokura
- 2de3.pdb.
hydrolase 08-feb-06 2de3
Mg
Title: crystal structure of dszb c27s mutant in complex with 2'- hydroxybiphenyl-2-sulfinic acid
Author: w. c. lee, t. ohshiro, t. matsubara, y. izumi, m. tanokura
- 2de4.pdb.
hydrolase 08-feb-06 2de4
Title: crystal structure of dszb c27s mutant in complex with biphenyl-2-sulfinic acid
Author: w. c. lee, t. ohshiro, t. matsubara, y. izumi, m. tanokura
- 2dn1.pdb.
oxygen storage/transport 25-apr-06 2dn1
Fe
Title: 1.25a resolution crystal structure of human hemoglobin in the oxy form
Author: s. -y. park, t. yokoyama, n. shibayama, y. shiro, j. r. tame
Keywords: high resolution crystal structure, oxygen transport
- 2dn2.pdb.
oxygen storage/transport 25-apr-06 2dn2
Fe
Title: 1.25a resolution crystal structure of human hemoglobin in the deoxy form
Author: s. -y. park, t. yokoyama, n. shibayama, y. shiro, j. r. tame
Keywords: high resolution crystal structure, oxygen transport
- 2dn3.pdb.
oxygen storage/transport 25-apr-06 2dn3
Fe
Title: 1.25a resolution crystal structure of human hemoglobin in the carbonmonoxy form
Author: s. -y. park, t. yokoyama, n. shibayama, y. shiro, j. r. tame
Keywords: high resolution crystal structure, oxygen transport
- 2dq6.pdb.
hydrolase 22-may-06 2dq6
Zn
Title: crystal structure of aminopeptidase n from escherichia coli
Author: y. nakajima, y. onohara, k. ito, t. yoshimoto
Keywords: family m1, zinc, gluzincin metallopeptidase
- 2dqm.pdb.
hydrolase 29-may-06 2dqm
Zn
Title: crystal structure of aminopeptidase n complexed with bestatin
Author: y. onohara, y. nakajima, k. ito, t. yoshimoto
Keywords: family m1, gluzincin metallopeptidase, inhibitor complex
- 2dsv.pdb.
signaling protein 07-jul-06 2dsv
Title: interactions of protective signalling factor with chitin- like polysaccharide: crystal structure of the complex between signalling protein from sheep (sps-40) and a hexasaccharide at 2.5a resolution
Author: d. b. srivastava, a. s. ethayathulla, j. kumar, n. singh, s. sharma, a. bhushan, a. srinivasan, t. p. singh
Keywords: hexasaccharide, complex, involution
- 2dsw.pdb.
signaling protein 07-jul-06 2dsw
Title: binding of chitin-like polysaccharides to protective signalling factor: crystal structure of the complex of signalling protein from sheep (sps-40) with a pentasaccharide at 2.8 a resolution
Author: d. b. srivastava, a. s. ethayathulla, j. kumar, n. singh, s. sharma, p. kaur, a. bhushan, t. p. singh
Keywords: pentasaccharide, complex
- 2dsz.pdb.
signaling protein 09-jul-06 2dsz
Title: three dimensional structure of a goat signalling protein secreted during involution
Author: j. kumar, a. s. ethayathulla, n. singh, r. ujwal, d. b. srivastava, s. sharma, t. p. singh
Keywords: native, involution
- 2dt1.pdb.
signaling protein 09-jul-06 2dt1
Title: crystal structure of the complex of goat signalling protein with tetrasaccharide at 2.09 a resolution
Author: j. kumar, a. s. ethayathulla, d. b. srivastava, n. singh, s. sharma, a. bhushan, p. kaur, t. p. singh
Keywords: tetrasaccharide
- 2dt3.pdb.
signaling protein 09-jul-06 2dt3
Title: crystal structure of the complex formed between goat signalling protein and the hexasaccharide at 2.28 a resolution
Author: j. kumar, a. s. ethayathulla, d. b. srivastava, n. singh, s. sharma, t. p. singh
Keywords: signalling, involution, mammary gland
- 2erh.pdb.
hydrolase/hydrolase inhibitor 24-oct-05 2erh
Title: crystal structure of the e7_g/im7_g complex; a designed interface between the colicin e7 dnase and the im7 immunity protein
Author: l. a. joachimiak, t. kortemme, b. l. stoddard, d. baker
Keywords: redesigned protein-protein interface, hydrogen bond network, specificity, molecular recognition, protein complex
- 2ewa.pdb.
transferase 02-nov-05 2ewa
F
Title: dual binding mode of pyridinylimidazole to map kinase p38
Author: l. delarbre, s. pouzieux, j. -p. guilloteau, n. michot
Keywords: dfg out
- 2exs.pdb.
rna binding protein 08-nov-05 2exs
Se
Title: trap3 (engineered trap)
Author: j. g. heddle, t. yokoyama, i. yamashita, s. y. park, j. r. h. tame
Keywords: engineered, ring protein, 12-mer
- 2ext.pdb.
rna binding protein 08-nov-05 2ext
Title: trap4 (engineered trap)
Author: j. g. heddle, t. yokoyama, i. yamashita, s. y. park, j. r. h. tame
Keywords: engineered, ring protein, 12-mer
- 2fs5.pdb.
transferase 20-jan-06 2fs5
Zn
Title: crystal structure of tdp-fucosamine acetyltrasnferase (wecd)- apo form
Author: m. n. hung, e. rangarajan, c. munger, g. nadeau, t. sulea, a. matte, m. cygler, montreal-kingston bacterial structural genomics initiative (bsgi)
Keywords: acetyltransferase, structural genomics, montreal- kingston bacterial structural genomics initiative, bsgi
- 2ft0.pdb.
transferase 23-jan-06 2ft0
Title: crystal structure of tdp-fucosamine acetyltransferase (wecd)- complex with acetyl-coa
Author: m. n. hung, e. rangarajan, c. munger, g. nadeau, t. sulea, a. matte, montreal-kingston bacterial structural genomics initiative (bsgi)
Keywords: structural genomics, montreal- kingston bacterial structural genomics initiative, bsgi
- 2fud.pdb.
hydrolase 26-jan-06 2fud
Si
Title: human cathepsin s with inhibitor cra-27566
Author: j. r. somoza
Keywords: proteinase, papain, 27566
- 2fum.pdb.
transferase 27-jan-06 2fum
Title: catalytic domain of protein kinase pknb from mycobacterium tuberculosis in complex with mitoxantrone
Author: a. wehenkel, p. m. alzari
- 2fx5.pdb.
hydrolase 03-feb-06 2fx5
Title: pseudomonas mendocina lipase
Author: r. bott, s. wu
- 2fz0.pdb.
membrane protein 08-feb-06 2fz0
(NMR, 20 structures)
Title: identification of yeast r-snare nyv1p as a novel longin domain protein
Author: w. wen, m. zhang
Keywords: longin domain
- 2fzu.pdb.
luminescent protein 10-feb-06 2fzu
Mg
Title: reduced enolate chromophore intermediate for gfp variant
Author: d. p. barondeau, j. a. tainer, e. d. getzoff
Keywords: intermediate, biosynthesis, post-translational modification, high resolution
- 2g06.pdb.
hydrolase 11-feb-06 2g06
Mg Se
Title: x-ray structure of mouse pyrimidine 5'-nucleotidase type 1, with bound magnesium(ii)
Author: e. bitto, c. a. bingman, g. e. wesenberg, g. n. phillips jr. , center for eukaryotic structural genomics (cesg)
Keywords: protein structure initiative, psi, center for eukaryotic structural genomics, cesg
- 2g07.pdb.
hydrolase 11-feb-06 2g07
Mg F Be Se
Title: x-ray structure of mouse pyrimidine 5'-nucleotidase type 1, phospho-enzyme intermediate analog with beryllium fluoride
Author: e. bitto, c. a. bingman, g. e. wesenberg, g. n. phillips jr. , center for eukaryotic structural genomics (cesg)
Keywords: protein structure initiative, psi, center for eukaryotic structural genomics, cesg
- 2g08.pdb.
hydrolase 11-feb-06 2g08
Mg F Al Se
Title: x-ray structure of mouse pyrimidine 5'-nucleotidase type 1, product-transition complex analog with aluminum fluoride
Author: e. bitto, c. a. bingman, g. e. wesenberg, g. n. phillips jr. , center for eukaryotic structural genomics (cesg)
Keywords: protein structure initiative, psi, center for eukaryotic structural genomics, cesg
- 2g09.pdb.
hydrolase 11-feb-06 2g09
Mg Se
Title: x-ray structure of mouse pyrimidine 5'-nucleotidase type 1, product complex
Author: e. bitto, c. a. bingman, g. e. wesenberg, g. n. phillips jr. , center for eukaryotic structural genomics (cesg)
Keywords: protein structure initiative, psi, center for eukaryotic structural genomics, cesg
- 2g0a.pdb.
hydrolase 11-feb-06 2g0a
Se Pb
Title: x-ray structure of mouse pyrimidine 5'-nucleotidase type 1 with lead(ii) bound in active site
Author: e. bitto, c. a. bingman, g. e. wesenberg, g. n. phillips jr. , center for eukaryotic structural genomics (cesg)
Keywords: protein structure initiative, psi, center for eukaryotic structural genomics, cesg
- 2g2q.pdb.
oxidoreductase 16-feb-06 2g2q
Se
Title: the crystal structure of g4, the poxviral disulfide oxidoreductase essential for cytoplasmic disulfide bond formation
Author: h. p. su, d. y. lin, d. n. garboczi
Keywords: oxidoreductase, poxvirus, vaccinia virus, orthopox, g4
- 2g3d.pdb.
luminescent protein 17-feb-06 2g3d
Mg
Title: structure of s65g y66a gfp variant after spontaneous peptide hydrolysis
Author: d. p. barondeau
Keywords: biosynthesis, peptide hydrolysis, post- translational modification
- 2g5z.pdb.
luminescent protein 23-feb-06 2g5z
Mg
Title: structure of s65g y66s gfp variant after spontaneous peptide hydrolysis and decarboxylation
Author: d. p. barondeau, c. j. kassmann, j. a. tainer, e. d. getzoff
Keywords: biosynthesis, peptide hydrolysis, post- translational modification, decarboxylation
- 2g6e.pdb.
luminescent protein 24-feb-06 2g6e
Mg
Title: structure of cyclized f64l s65a y66s gfp variant
Author: d. p. barondeau
Keywords: biosynthesis, post-translational modification, histidine ammonia lyase, mio, electrophile
- 2g7h.pdb.
transferase 28-feb-06 2g7h
(NMR, 10 structures)
Title: structure of an o6-methylguanine dna methyltransferase from methanococcus jannaschii (mj1529)
Author: a. roberts
Keywords: nmr, dna repair, dna methyltransferase
- 2g95.pdb.
transferase 05-mar-06 2g95
Title: crystal structure of visfatin/pre-b cell colony enhancing factor 1/nicotinamide phosphoribosyltransferase
Author: m. -k. kim, s. h. eom
Keywords: pbef, namprtase, rattus norvegicus
- 2g96.pdb.
transferase 05-mar-06 2g96
Title: crystal structure of visfatin/pre-b cell colony enhancing factor 1/nicotinamide phosphoribosyltransferase in complex with niconamide mononucleotide
Author: s. h. eom, m. -k. kim
Keywords: pbef, namprtase, nmn, rattus norvegicus
- 2g97.pdb.
transferase 05-mar-06 2g97
Title: crystal structure of visfatin/pre-b cell colony enhancing factor 1/nicotinamide phosphoribosyltransferase in complex with the specific inhibitor fk-866
Author: m. -k. kim, s. h. eom
Keywords: pbef, namprtase, fk-866, rattus norvegicus
- 2g9o.pdb.
hydrolase 07-mar-06 2g9o
(NMR, 30 structures)
Title: solution structure of the apo form of the third metal- binding domain of atp7a protein (menkes disease protein)
Author: l. banci, i. bertini, f. cantini, n. dellamalva, a. rosato, t. herrmann, k. wuthrich, structural proteomics in europe (spine)
Keywords: nmr, solution structure, structural genomics, structural proteomics in europe, spine
- 2ga7.pdb.
hydrolase 08-mar-06 2ga7
Cu
(NMR, 30 structures)
Title: solution structure of the copper(i) form of the third metal- binding domain of atp7a protein (menkes disease protein)
Author: l. banci, i. bertini, f. cantini, n. dellamalva, a. rosato, t. herrmann, k. wuthrich, structural proteomics in europe (spine)
Keywords: solution structure, menkes disease-associated protein, copper(i), structural genomics, structural proteomics in europe, spine
- 2gb2.pdb.
electron transport 09-mar-06 2gb2
Cu
Title: the p52g mutant of amicyanin in the cu(ii) state.
Author: j. k. ma, c. j. carrell, f. s. mathews, v. l. davidson
- 2gba.pdb.
electron transport 10-mar-06 2gba
Cu
Title: reduced cu(i) form at ph 4 of p52g mutant of amicyanin
Author: j. k. ma, c. j. carrell, f. s. mathews, v. l. davidson
- 2gdw.pdb.
ligase/transport protein 17-mar-06 2gdw
(NMR, 19 structures)
Title: solution structure of the b. brevis tycc3-pcp in a/h-state
Author: a. koglin, f. loehr, v. v. rogov, m. a. marahiel, f. bernhard, v. doetsch
- 2gdx.pdb.
ligase/transport protein 17-mar-06 2gdx
(NMR, 16 structures)
Title: solution structure of the b. brevis tycc3-pcp in h-state
Author: a. koglin, f. loehr, v. v. rogov, m. a. marahiel, f. bernhard, v. doetsch
- 2gdy.pdb.
ligase/transport protein 17-mar-06 2gdy
(NMR, 20 structures)
Title: solution structure of the b. brevis tycc3-pcp in a-state
Author: a. koglin, f. loehr, v. v. rogov, m. a. marahiel, f. bernhard, v. doetsch
- 2geh.pdb.
lyase 20-mar-06 2geh
Hg Zn
Title: n-hydroxyurea, a versatile zinc binding function in the design of metalloenzyme inhibitors
Author: c. temperini, a. innocenti, a. scozzafava, c. t. supuran
Keywords: inhibitors, crystal structure
- 2gel.pdb.
chaperone 20-mar-06 2gel
Title: 2.05a crystal structure of salmonella typhimurium yeaz, form b
Author: c. e. nichols
Keywords: yeaz, rpf, actin-like-fold, glycoprotease
- 2gem.pdb.
chaperone 20-mar-06 2gem
Title: 2.1a crystal structure of salmonella tyhpimurium yeaz, a putative gram-negative rpf, form-a
Author: c. e. nichols
Keywords: glycoprotease, yeaz, actin-like-fold
- 2geq.pdb.
transcription/dna 20-mar-06 2geq
Zn
Title: protein-dna complex
Author: w. c. ho, m. x. fitzgerald, r. marmorstein
Keywords: tumor suppressor
- 2ggr.pdb.
protein binding 24-mar-06 2ggr
(NMR, 20 structures)
Title: solution structure of the c-terminal sh3 domain of c-crkii
Author: v. muralidharan, k. dutta, t. w. muir, d. cowburn
Keywords: nmr, crk-ii, sh3 domain
- 2gk3.pdb.
structural genomics, unknown function 31-mar-06 2gk3
Se
Title: cytoplasmic protein stm3548 from salmonella typhimurium
Author: t. petrova, m. e. cuff, r. y. wu, d. holzle, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: stm3548, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg
- 2grk.pdb.
virus/viral protein 24-apr-06 2grk
Title: crystal structure of ectromelia virus evm1 chemokine binding protein
Author: p. l. arnold, d. h. fremont
Keywords: chemokine binding protein, immune system
- 2gsn.pdb.
hydrolase 26-apr-06 2gsn
Zn
Title: structure of xac nucleotide pyrophosphatase/phosphodiesterase
Author: j. g. zalatan, t. d. fenn, a. t. brunger, d. herschlag
Keywords: npp
- 2gso.pdb.
hydrolase 26-apr-06 2gso
Zn V
Title: structure of xac nucleotide pyrophosphatase/phosphodiesterase in complex with vanadate
Author: j. g. zalatan, t. d. fenn, a. t. brunger, d. herschlag
Keywords: npp
- 2gsu.pdb.
hydrolase 26-apr-06 2gsu
Zn
Title: structure of xac nucleotide pyrophosphatase/phosphodiesterase in complex with amp
Author: j. g. zalatan, t. d. fenn, a. t. brunger, d. herschlag
Keywords: npp
- 2gtd.pdb.
transferase 27-apr-06 2gtd
Title: crystal structure of a type iii pantothenate kinase: insight into the catalysis of an essential coenzyme a biosynthetic enzyme universally distributed in bacteria
Author: k. yang, y. eyobo, a. l. brand, d. martynowski, d. tomchick
- 2gtl.pdb.
oxygen storage/transport 28-apr-06 2gtl
Zn Fe Ca
Title: lumbricus erythrocruorin at 3.5a resolution
Author: w. e. royer jr. , h. sharma, k. strand, j. e. knapp, b. bhyravbhatla
Keywords: respiratory protein, hexagonal bilayer, dihedral d6 symmetry, triple stranded helical coils
- 2gty.pdb.
sugar binding protein 28-apr-06 2gty
Title: crystal structure of unliganded griffithsin
Author: n. e. ziolkowska, a. wlodawer
Keywords: lectins, domain swapping, mannose binding, hiv, sars
- 2guc.pdb.
sugar binding protein 29-apr-06 2guc
Title: crystal structure of a complex of griffithsin with mannose at 1.78 a resolution.
Author: n. e. ziolkowska, a. wlodawer
Keywords: lectins, domain swapping, mannose binding, hiv, sars
- 2gud.pdb.
sugar binding protein 29-apr-06 2gud
Title: crystal structure of a complex of griffithsin with mannose at 0.94 a resolution
Author: n. e. ziolkowska, a. wlodawer
Keywords: lectins, domain swapping, mannose binding, hiv, sars
- 2gue.pdb.
sugar binding protein 29-apr-06 2gue
Title: crystal structure of a complex of griffithsin with n- acetylglucosamine
Author: n. e. ziolkowska, a. wlodawer
Keywords: lectins, domain swapping, mannose binding, hiv, sars
- 2gun.pdb.
dna/rna 01-may-06 2gun
Co Br
Title: rna-binding affinities and crystal structure of oligonucleotides containing five-atom amide-based backbone structures
Author: p. s. pallan, m. egli
Keywords: amide bearing dna, thymidine dimers, internucleosidic amide linkage, dna, rna
- 2gus.pdb.
unknown function 01-may-06 2gus
Title: conformational transition between four- and five-stranded phenylalanine zippers determined by a local packing interaction
Author: j. liu, q. zheng, y. deng, n. r. kallenbach, m. lu
Keywords: protein folding, coiled coil, tetramer, phenylalanine-zipper
- 2guv.pdb.
unknown function 01-may-06 2guv
Title: conformational transition between four- and five-stranded phenylalanine zippers determined by a local packing interaction
Author: j. liu, q. zheng, y. deng, n. r. kallenbach, m. lu
Keywords: protein folding, coiled coil, pentamer, phenylalanine-zipper
- 2gux.pdb.
sugar binding protein 01-may-06 2gux
Se
Title: selenomethionine derivative of griffithsin
Author: n. e. ziolkowska, a. wlodawer
Keywords: lectins, domain swapping, mannose binding, hiv, sars
- 2h0d.pdb.
metal binding protein/ligase 14-may-06 2h0d
Zn
Title: structure of a bmi-1-ring1b polycomb group ubiquitin ligase complex
Author: r. m. xu
Keywords: chromatin, ubiquitin ligase, histone, transcription, wpigenetics
- 2h1m.pdb.
ribonucleic acid 16-may-06 2h1m
Se
Title: synthesis, oxidation behavior, crystallization and structure of 2'-methylseleno guanosine containing rnas
Author: a. a. serganov
Keywords: mismatch a rna, ribonucleic acid, se 2'- methylse
- 2h3p.pdb.
transferase 22-may-06 2h3p
Title: crystal structure of murine carnitine acetyltransferase in complex with carnitine and acetyl-coa
Author: y. s. hsiao, g. jogl, l. tong
- 2h3u.pdb.
transferase 23-may-06 2h3u
Title: crystal structure of murine carnitine acetyltransferase in complex with carnitine and coa
Author: y. s. hsiao, g. jogl, l. tong
- 2h3w.pdb.
transferase 23-may-06 2h3w
Title: crystal structure of the s554a/m564g mutant of murine carnitine acetyltransferase in complex with hexanoylcarnitine and coa
Author: y. s. hsiao, g. jogl, l. tong
- 2h50.pdb.
chaperone 25-may-06 2h50
(cryo-electron microscopy)
Title: multiple distinct assemblies reveal conformational flexibility in the small heat shock protein hsp26
Author: h. e. white, e. v. orlova, s. chen, l. wang, a. ignatiou, b. gowen, t. stromer, t. m. franzmann, m. haslbeck, j. buchner, h. r. saibil
Keywords: chaperones, cryo-electron microscopy, heat shock proteins, single particle reconstruction
- 2h53.pdb.
chaperone 25-may-06 2h53
(cryo-electron microscopy)
Title: multiple distinct assemblies reveal conformational flexibility in the small heat shock protein hsp26
Author: h. e. white, e. v. orlova, s. chen, l. wang, a. ignatiou, b. gowen, t. stromer, t. m. franzmann, m. haslbeck, j. buchner, h. r. saibil
Keywords: chaperones, cryo-electron microscopy, heat shock proteins, single particle reconstruction
- 2h6j.pdb.
hydrolase 31-may-06 2h6j
Title: crystal structure of the beta f145a rhodococcus proteasome (casp target)
Author: y. d. kwon
Keywords: half proteasome, assembly-dependent activation
- 2h8b.pdb.
hormone/growth factor 07-jun-06 2h8b
(NMR, 20 structures)
Title: solution structure of insl3
Author: k. j. rosengren, d. j. craik, n. l. daly
- 2h9l.pdb.
structural genomics, gene regulation 10-jun-06 2h9l
Title: wdr5delta23
Author: j. r. min, a. schuetz, a. allali-hassani, f. martin, p. loppnau, m. vedadi, j. weigelt, m. sundstrom, a. m. edwards, c. h. arrowsmith, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2h9m.pdb.
structural genomics, gene regulation 10-jun-06 2h9m
Title: wdr5 in complex with unmodified h3k4 peptide
Author: j. r. min, a. schuetz, a. allali-hassani, f. martin, p. loppnau, m. vedadi, j. weigelt, m. sundstrom, a. m. edwards, c. h. arrowsmith, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2h9n.pdb.
structural genomics, gene regulation 10-jun-06 2h9n
Title: wdr5 in complex with monomethylated h3k4 peptide
Author: j. r. min, a. schuetz, a. allali-hassani, f. martin, p. loppnau, m. vedadi, j. weigelt, m. sundstrom, a. m. edwards, c. h. arrowsmith, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2h9o.pdb.
structural genomics, gene regulation 10-jun-06 2h9o
Title: wdr5 in complex with dimethylated h3k4 peptide
Author: j. r. min, a. schuetz, a. allali-hassani, f. martin, p. loppnau, m. vedadi, j. weigelt, m. sundstrom, a. m. edwards, c. h. arrowsmith, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2h9p.pdb.
structural genomics, gene regulation 10-jun-06 2h9p
Title: wdr5 in complex with trimethylated h3k4 peptide
Author: j. r. min, a. schuetz, a. allali-hassani, f. martin, p. loppnau, m. vedadi, j. weigelt, m. sundstrom, a. m. edwards, c. h. arrowsmith, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2hd0.pdb.
hydrolase 19-jun-06 2hd0
Title: structure of the catalytic domain of hepatitis c virus ns2
Author: i. c. lorenz, c. m. rice, j. marcotrigiano
Keywords: dimer, composite active site
- 2hgh.pdb.
transcription/rna 27-jun-06 2hgh
Zn
(NMR, 20 structures)
Title: transcription factor iiia zinc fingers 4-6 bound to 5s rrna 55mer (nmr structure)
Author: b. m. lee
- 2hi1.pdb.
structural genomics, unknown function 28-jun-06 2hi1
Se
Title: the structure of a putative 4-hydroxythreonine-4-phosphate dehydrogenase from salmonella typhimurium.
Author: m. e. cuff, p. quartey, d. holzle, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: salmonella typhimurium, 4- hydroxythreonine-4-phosphate dehydrogenase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2hj8.pdb.
signaling protein 30-jun-06 2hj8
(NMR, 20 structures)
Title: solution nmr structure of the c-terminal domain of the interferon alpha-inducible isg15 protein from homo sapiens. northeast structural genomics target hr2873b
Author: j. m. aramini, c. k. ho, c. yin, k. cunningham, h. janjua, l. -c. ma, r. xiao, t. b. acton, g. t. montelione, northeast structural genomics consortium (nesg)
Keywords: human isg15, nmr structure, northeast structural genomics consortium, protein structure initiative, nesg, psi-1
- 2hjr.pdb.
oxidoreductase 30-jun-06 2hjr
Title: crystal structure of cryptosporidium parvum malate dehydrogenase
Author: a. k. wernimont, a. dong, j. lew, h. ren, w. qiu, i. kozieradzki, j. weigelt, m. sundstrom, a. m. edwards, c. h. arrowsmith, r. hui, m. amani, structural genomics consortium (sgc)
Keywords: malaria, cryptosporidium parvum, structural genomics, structural genomics consortium, sgc
- 2hon.pdb.
hydrolase 14-jul-06 2hon
Cl Zn
Title: structure of an enterococcus faecalis hd domain phosphohydrolase
Author: i. i. vorontsov, g. minasov, l. shuvalova, j. s. brunzelle, s. moy, f. r. collart, a. joachimiak, w. f. anderson, midwest center for structural genomics (mcsg)
Keywords: hd domain, phosphohydrolase, structural genomics , psi-2, protein structure initiative, midwest center for structural genomics, mcsg
- 2hpz.pdb.
hydrolase 18-jul-06 2hpz
Ca
Title: crystal structure of proteinase k complex with a synthetic peptide klkllvvirlk at 1.69 a resolution
Author: r. prem kumar, a. k. singh, r. k. somvanshi, n. singh, s. sharma, p. kaur, s. dey, a. bhushan, t. p. singh
Keywords: complex, peptide complex
- 2hq6.pdb.
isomerase 18-jul-06 2hq6
I
Title: structure of the cyclophilin_cecyp16-like domain of the serologically defined colon cancer antigen 10 from homo sapiens
Author: j. r. walker, t. davis, r. paramanathan, e. m. newman, p. j. finerty jr. , f. mackenzie, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
Keywords: peptidyl-prolyl cis-trans isomerase, structural genomics, structural genomics consortium, sgc
- 2hti.pdb.
structural genomics, unknown function 25-jul-06 2hti
Na Se
Title: crystal structure of bh0577 (10173191) from bacillus halodurans at 2.50 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: bh0577, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 2iuw.pdb.
oxidoreductase 07-jun-06 2iuw
Fe
Title: crystal structure of human abh3 in complex with iron ion and 2-oxoglutarate
Author: o. sundheim, c. b. vagbo, m. bjoras, m. m. l. desousa, v. talstad, p. a. aas, f. drablos, h. e. krokan, j. a. tainer, g. slupphaug
Keywords: dna/rna repair, oxidoreductase, mad, demethylase, polymorphism, beta jellyroll
- 2iwn.pdb.
signalling protein 03-jul-06 2iwn
Title: 3rd pdz domain of multiple pdz domain protein mpdz (casp target)
Author: j. m. elkins, c. gileadi, p. savitsky, g. berridge, c. e. a. smee, a. c. w. pike, e. papagrigoriou, m. sundstrom, a. edwards, c. arrowsmith, j. weigelt, d. a. doyle
Keywords: pdz, mpdz, mupp1, mupp- 1, pdz domain, host-virus interaction, structural genomics consortium, synaptosome, tight junction, alternative splicing, signalling protein
- 2iwo.pdb.
signaling protein 03-jul-06 2iwo
Title: 12th pdz domain of multiple pdz domain protein mpdz (casp target)
Author: j. m. elkins, x. yang, c. gileadi, g. schoch, c. johansson, p. savitsky, g. berridge, c. e. a. smee, a. turnbull, a. pike, e. papagrigoriou, m. sundstrom, a. edwards, c. arrowsmith, j. weigelt, d. a. doyle
Keywords: pdz, mpdz, mupp1, mupp-1, pdz domain, host-virus interaction, structural genomics consortium, synaptosome, tight junction, alternative splicing, signaling protein
- 2iwp.pdb.
signaling protein 03-jun-06 2iwp
Title: 12th pdz domain of multiple pdz domain protein mpdz (casp target)
Author: j. m. elkins, x. yang, c. gileadi, g. schoch, c. johansson, p. savitsky, g. berridge, c. e. a. smee, a. turnbull, a. pike, e. papagrigoriou, m. sundstrom, a. edwards, c. arrowsmith, j. weigelt, d. a. doyle
Keywords: pdz, mpdz, mupp1, mupp-1, membrane, pdz domain, host-virus interaction, structural genomics consortium, synaptosome, tight junction, alternative splicing, signaling protein
- 2iy6.pdb.
oxidoreductase 13-jul-06 2iy6
Cl Na
Title: 1-pyrroline-5-carboxylate dehydrogenase from thermus with bound citrate
Author: e. inagaki, k. sakamoto, m. nishio, s. yokoyama
Keywords: citrate, dehyrogenase, oxidoreductase
- 2iz5.pdb.
metal transport 25-jul-06 2iz5
Title: function and structure of the molybdenum cofactor carrier protein mcp from chlamydomonas reinhardtii
Author: k. fischer, a. llamas, m. tejadajimenez, n. schrader, j. kuper, r. r. mendel, e. fernandez, g. schwarz
Keywords: molybdenum cofactor, chlamydomonas rheinhardtii
- 2iz6.pdb.
metal transport 25-jul-06 2iz6
Title: structure of the chlamydomonas rheinhardtii moco carrier protein
Author: k. fischer, a. llamas, m. tejadajimenez, n. schrader, j. kuper, r. r. mendel, e. fernandez, g. schwarz
Keywords: metal transport
- 2iz7.pdb.
metal transport 25-jul-06 2iz7
Title: structure of moco carrier protein from chlamydomonas reinhardtii
Author: k. fischer, a. llamas, m. tejadajimenez, n. schrader, j. kuper, r. r. mendel, e. fernandez, g. schwarz
Keywords: metal transport
- 2iz8.pdb.
complex (capsid protein/rna hairpin) 25-jul-06 2iz8
Title: ms2-rna hairpin (c-7) complex
Author: c. helgstrand, e. grahn, n. j. stonehouse, p. g. stockley, l. liljas
Keywords: capsid, hairpin, levivirus, complex (capsid protein/rna hairpin)
- 2iz9.pdb.
complex (capsid protein/rna hairpin) 25-jul-06 2iz9
Title: ms2-rna hairpin (4one-5) complex
Author: e. grahn, n. j. stonehouse, c. j. adams, k. fridborg, l. beigelman, j. matulic-adamic, s. l. warriner, p. g. stockley, l. liljas
Keywords: capsid, levivirus, virus, complex (capsid protein/rna hairpin)
- 2izn.pdb.
complex (capsid protein/rna hairpin) 25-jul-06 2izn
Title: ms2-rna hairpin (g-10) complex
Author: c. helgstrand, e. grahn, t. moss, n. j. stonehouse, k. tars, p. g. stockley, l. liljas
Keywords: capsid, capsid protein, complex (capsid protein/rna hairpin), hairpin, levivirus, rna-binding, structural protein, virus/viral protein/rna, virus
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Metalloprotein Structure and Design project home page:
www.scripps.edu/research/metallo
Computational Center for Macromolecular Structure home page:
www.sdsc.edu/CCMS