Recent PDB releases or updates: week of 7 July 2006

• 1r7l.pdb. structural genomics, unknown function 21-oct-03 1r7l
  Title: 2.0 a crystal structure of a phage protein from bacillus cereus atcc 14579
  Author: r. zhang, g. joachimiak, f. collart, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: phage protein, two layers alpha-beta sandwich, psi, protein structure initiative, midwest center for structural genomics, mcsg
  
• 1rtt.pdb. structural genomics, unknown function 10-dec-03 1rtt
  Title: crystal structure determination of a putative nadh- dependent reductase using sulfur anomalous signal
  Author: r. agarwal, s. swaminathan, new york structural genomics research consortium (nysgrc)
  Keywords: protein structure initiative, sad with sulfur, putative reductase, psi, new york structural genomics research consortium, nysgrc
  
• 1u69.pdb. structural genomics, unknown function 29-jul-04 1u69 Se
  Title: hypothetical protein pa2721 from pseudomonas aeruginosa pao1
  Author: b. nocek, m. cuff, e. evdokimova, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: mscg, pseudomonas aeruginosa pao1, hypothetical protein, protein structure initiative (psi), midwest center for structural genomics, mcsg
  
• 1wcb.pdb. immune system 10-nov-04 1wcb I
  Title: plp-dependent catalytic antibody 15a9 in complex with its hapten
  Author: b. golinelli-pimpaneau, p. christen
  Keywords: transamination, pyridoxal-phosphate, hapten, phosphopyridoxyl-l-lysine, immune system
  
• 1wyd.pdb. ligase 12-feb-05 1wyd Cl
  Title: crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii
  Author: y. maeda, m. t. hossain, s. ubukata, k. suzuki, t. sekiguchi, a. takenaka
  Keywords: archaea, sulfolobus tokodaii
  
• 1wye.pdb. transferase 12-feb-05 1wye
  Title: crystal structure of 2-keto-3-deoxygluconate kinase (form 1) from sulfolobus tokodaii
  Author: t toyoda, k. suzuki, m. t. hossain, i. koike, t. sekiguchi, a. takenaka
  Keywords: sulfolobus tokokai
  
• 1x0u.pdb. lyase 29-mar-05 1x0u
  Title: crystal structure of the carboxyl transferase subunit of putative pcc of sulfolobus tokodaii
  Author: y. kakuta, s. sueda, h. kondo
  
  
• 1x77.pdb. structural genomics, unknown function 13-aug-04 1x77
  Title: crystal struture of a nad(p)h-dependent fmn reductase complexed with fmn
  Author: r. agarwal, s. swaminathan, new york structural genomics research consortium (nysgrc)
  Keywords: protein structure initiative (psi), fmn reductase, fmn bound, new york structural genomics research consortium, nysgrc
  
• 1y07.pdb. oxidoreductase 15-nov-04 1y07 Mg Fe
  Title: crystal structure of the superoxide reductase from treponema pallidum
  Author: t. santos-silva, j. trincao, a. l. carvalho, c. bonifacio, f. auchere, j. moura, m. j. romao
  Keywords: iron binding
  
• 1y38.pdb. hydrolase 24-nov-04 1y38 Na
  Title: crystal structure of the complex formed between phospholipase a2 dimer and glycerophosphate at 2.4 a resolution
  Author: n. singh, t. jabeen, s. sharma, t. p. singh
  Keywords: inhibition, complex
  
• 1y75.pdb. hydrolase 08-dec-04 1y75 Zn
  Title: a new form of catalytically inactive phospholipase a2 with an unusual disulphide bridge cys 32- cys 49 reveals recognition for n-acetylglucosmine
  Author: t. jabeen, n. singh, j. jasti, r. k. singh, s. sharma, m. perbandt, c. betzel, p. kaur, a. srinivasan, t. p. singh
  Keywords: activity, molecular association
  
• 1yr5.pdb. metal binding protein/transferase 03-feb-05 1yr5 Ca
  Title: 1.7-a structure of calmodulin bound to a peptide from dap kinase
  Author: p. kursula, j. vahokoski, m. wilmanns
  
  
• 1zl7.pdb. hydrolase 05-may-05 1zl7 Ca
  Title: crystal structure of catalytically-active phospholipase a2 with bound calcium
  Author: m. t. murakami, a. c. cintra, a. gabdoulkhakov, n. genov, c. betzel, r. k. arni
  Keywords: snake venom
  
• 1zlb.pdb. hydrolase 05-may-05 1zlb
  Title: crystal structure of catalytically-active phospholipase a2 in the absence of calcium
  Author: m. t. murakami, a. c. cintra, a. gabdoulkhakov, n. genov, c. betzel, r. k. arni
  Keywords: toxin, snake venom
  
• 1zno.pdb. structural genomics, unknown function 11-may-05 1zno Mg Se
  Title: crystal structure of vc702 from vibrio cholerae, northeast structural genomics consortium target: vcp1
  Author: s. ni, f. forouhar, d. e. bussiere, h. robinson, m. a. kennedy, new york structural genomics research consortium (nysgrc)
  Keywords: homodimer, structural genomics, psi, protein structure initiative, new york structural genomics research consortium, nysgrc
  
• 1zzw.pdb. hydrolase 14-jun-05 1zzw
  Title: crystal structure of catalytic domain of human map kinase phosphatase 5
  Author: d. g. jeong, t. s. yoon, j. h. kim, m. y. shim, s. k. jeong, j. h. son, s. e. ryu, s. j. kim
  Keywords: mkp, ptp
  
• 2a1y.pdb. oxidoreductase 21-jun-05 2a1y
  Title: crystal structure of guac-gmp complex from bacillus anthracis at 2.26 a resolution.
  Author: r. grenha, v. m. levdikov, e. v. blagova, m. j. fogg, j. a. brannigan, a. j. wilkinson, k. s. wilson, structural proteomics in europe (spine)
  Keywords: gmp, purines, pyrimidines, nucleosides, and nucleotides: nucleotide and nucleoside interconversions, spine, structural genomics, structural proteomics in europe
  
• 2a2i.pdb. transferase 22-jun-05 2a2i Zn
  Title: aquifex aeolicus kdo8ps in complex with pep, a5p, zn2+
  Author: f. kona, x. xu, j. lu, p. martin, d. l. gatti
  Keywords: kdo8ps, pep, a5p, zn2+
  
• 2a2q.pdb. hydrolase/blood clotting 22-jun-05 2a2q Cl Mg Zn Na Ca
  Title: complex of active-site inhibited human coagulation factor viia with human soluble tissue factor in the presence of ca2+, mg2+, na+, and zn2+
  Author: s. p. bajaj, m. bajaj, a. e. schmidt, k. padmanabhan
  Keywords: soluble tissue factor, mg2+, ca2+, na+, zn2+
  
• 2a31.pdb. hydrolase 23-jun-05 2a31 B Mg Na Ca
  Title: trypsin in complex with borate
  Author: t. r. transue, s. a. gabel, r. e. london
  Keywords: trypsin
  
• 2a32.pdb. hydrolase 23-jun-05 2a32 B Na Ca
  Title: trypsin in complex with benzene boronic acid
  Author: t. r. transue, s. a. gabel, r. e. london
  
  
• 2a4g.pdb. virus/viral protein 28-jun-05 2a4g Zn
  Title: hepatitis c protease ns3-4a serine protease with ketoamide inhibitor sch225724 bound
  Author: a. arasappan, f. g. njoroge, t. y. chan, f. bennett, s. l. bogen, k. chen, h. gu, l. hong, e. jao, y. t. liu, r. g. lovey, t. parekh, r. e. pike, p. pinto, b. santhanam, s. venkatraman, h. vaccaro, h. wang, x. yang, z. zhu, b. mckittrick, a. k. saksena, v. girijavallabhan, j. pichardo, n. butkiewicz, r. ingram, b. malcolm, a. j. prongay, n. yao, b. marten, madison v. , s. kemp, o. levy, m. lim-wilby, s. tamura, a. k. ganguly
  
  
• 2a4q.pdb. virus/viral protein 29-jun-05 2a4q Zn
  Title: hcv ns3 protease with ns4a peptide and a covalently bound macrocyclic ketoamide compound.
  Author: k. x. chen, f. g. njoroge, a. prongay, j. pichardo, v. madison, v. girijavallabhan
  
  
• 2a4r.pdb. virus/viral protein 29-jun-05 2a4r Zn
  Title: hcv ns3 protease domain with a ketoamide inhibitor covalently bound.
  Author: s. bogen, a. k. saksena, a. arasappan, h. gu, f. g. njoroge, v. girijavallabhan, j. pichardo, n. butkiewicz, a. prongay, v. madison
  
  
• 2a7t.pdb. toxin 06-jul-05 2a7t
  Title: crystal structure of a novel neurotoxin from buthus tamalus at 2.2a resolution.
  Author: a. s. ethayathulla, m. sharma, k. saravanan, s. sharma, p. kaur, s. yadav, a. srinivasan, t. p. singh
  Keywords: neurotoxin, red scorpion, crystal structure
  
• 2adp.pdb. oxidoreductase 20-jul-05 2adp Mn K
  Title: nitrated human manganese superoxide dismutase
  Author: p. quint, r. reutzel, r. mikulski, r. mckenna, d. n. silverman
  
  
• 2adq.pdb. oxidoreductase 20-jul-05 2adq Mn K
  Title: human manganese superoxide dismutase
  Author: p. quint, r. reutzel, r. mikulski, r. mckenna, d. n. silverman
  Keywords: free radicals, proton shuttle
  
• 2aer.pdb. blood clotting 23-jul-05 2aer Cl Mg Zn Na Ca
  Title: crystal structure of benzamidine-factor viia/soluble tissue factor complex.
  Author: s. p. bajaj, a. e. schmidt, k. padmanabhan, m. s. bajaj, a. liesum, j. dumas, d. prevost, h. schreuder
  Keywords: calcium, magnesium, zinc, sodium, factor viia, tissue factor, benzamidine, blood coagulation, clotting, blood, coagulation, clotting factor, coagulation factor
  
• 2aje.pdb. dna binding protein 01-aug-05 2aje (NMR, 15 structures)
  Title: solution structure of the arabidopsis thaliana telomeric repeat-binding protein dna binding domain
  Author: h. h. hsiao, s. c. sue, b. c. chung, y. h. cheng, t. h. huang
  Keywords: dna-binding, trp, myb motif
  
• 2alw.pdb. hydrolase 08-aug-05 2alw Zn
  Title: golgi alpha-mannosidase ii complex with noeuromycin
  Author: d. a. kuntz, m. b. bols, h. liu, d. r. rose
  
  
• 2apj.pdb. structural genomics, unknown function 16-aug-05 2apj
  Title: x-ray structure of protein from arabidopsis thaliana at4g34215 at 1.6 angstrom resolution
  Author: g. e. wesenberg, g. n. phillips jr. , j. g. mccoy, e. bitto, c. a. bingman, s. t. allard, center for eukaryotic structural genomics (cesg)
  Keywords: putative esterase,sgnh-hydrolase superfamily, carbohydrate esterase family 6, structural genomics, protein structure initiative, psi, cesg, center for eukaryotic structural genomics
  
• 2atf.pdb. oxidoreductase 24-aug-05 2atf Ni Se
  Title: x-ray structure of cysteine dioxygenase type i from mus musculus mm.241056
  Author: g. e. wesenberg, g. n. phillips jr. , j. g. mccoy, e. bitto, c. a. bingman, s. t. m. allard, center for eukaryotic structural genomics (cesg)
  Keywords: pfam05995.2 cdo_i, bc013638, cupin family, structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg
  
• 2aw1.pdb. lyase 31-aug-05 2aw1 Hg Zn
  Title: carbonic anhydrase inhibitors: valdecoxib binds to a different active site region of the human isoform ii as compared to the structurally related cyclooxygenase ii "selective" inhibitor celecoxib
  Author: a. di fiore, c. pedone, k. d'ambrosio, a. scozzafava, g. de simone, c. t. supuran
  Keywords: protein-inhibitor complex
  
• 2axd.pdb. transferase 05-sep-05 2axd (NMR, 12 structures)
  Title: solution structure of the theta subunit of escherichia coli dna polymerase iii in complex with the epsilon subunit
  Author: m. a. keniry, a. y. park, e. a. owen, s. m. hamdan, g. pintacuda, g. otting, n. e. dixon
  Keywords: dna polymerase iii
  
• 2b0s.pdb. immmune system 14-sep-05 2b0s
  Title: crystal structure analysis of anti-hiv-1 v3 fab 2219 in complex with mn peptide
  Author: r. l. stanfield, m. k. gorny, s. zolla-pazner, i. a. wilson
  
  
• 2b1a.pdb. immmune system 15-sep-05 2b1a
  Title: crystal structure analysis of anti-hiv-1 v3 fab 2219 in complex with ug1033 peptide
  Author: r. l. stanfield, m. k. gorny, s. zolla-pazner, i. a. wilson
  
  
• 2b1h.pdb. immmune system 15-sep-05 2b1h
  Title: crystal structure analysis of anti-hiv-1 v3 fab 2219 in complex with ug29 peptide
  Author: r. l. stanfield, m. k. gorny, s. zolla-pazner, i. a. wilson
  
  
• 2b87.pdb. protein binding 06-oct-05 2b87 (NMR, 40 structures)
  Title: structural basis for molecular recognition in an affibody:affibody complex
  Author: c. lendel, j. dogan, t. hard
  Keywords: molecular recognition, nmr spectroscopy, induced fit, affibody
  
• 2b88.pdb. protein binding 06-oct-05 2b88 (NMR, 40 structures)
  Title: structural basis for molecular recognition in an affibody:affibody complex
  Author: c. lendel, j. dogan, t. hard
  Keywords: protein engineering, molecular recognition, nmr spectroscopy,induced fit, affibody
  
• 2b89.pdb. protein binding 06-oct-05 2b89 (NMR, 40 structures)
  Title: structural basis for molecular recognition in an affibody:affibody complex
  Author: c. lendel, j. dogan, t. hard
  Keywords: protein engineering, molecular recognition, nmr spectroscopy, induced fit, affibody
  
• 2bbl.pdb. virus/viral protein 17-oct-05 2bbl (NMR, 10 structures)
  Title: nmr structures of the peptide linked to the genome (vpg) of poliovirus in a stabilizing solvent
  Author: c. h. schein, n. oezguen
  Keywords: rna synthesis, uridylylation, viral replication, polymerase cofactor
  
• 2bbp.pdb. virus/viral protein 17-oct-05 2bbp (NMR, 10 structures)
  Title: nmr structures of the peptide linked to the genome (vpg) of poliovirus
  Author: c. h. schein, n. oezguen
  Keywords: rna transcription primer, flexible structure, viral polymerase, picornavirus
  
• 2bch.pdb. hydrolase 19-oct-05 2bch Cl Ca
  Title: a possible of second calcium ion in interfacial binding: atomic and medium resolution crystal structures of the quadruple mutant of phospholipase a2
  Author: k. sekar, m. yogavel, d. velmurugan, m. j. poi, z. dauter, m. d. tsai
  Keywords: beta sheet, calcium ion and chloride ion
  
• 2bd1.pdb. hydrolase 19-oct-05 2bd1 Ca
  Title: a possible role of the second calcium ion in interfacial binding: atomic and medium resolution crystal structures of the quadruple mutant of phospholipase a2
  Author: k. sekar, d. velmurugan, m. d. tsai
  Keywords: beta sheet
  
• 2bfn.pdb. hydrolase 09-dec-04 2bfn Cl Ca
  Title: the crystal structure of the complex of the haloalkane dehalogenase linb with the product of dehalogenation reaction 1,2-dichloropropane.
  Author: p. banas, m. otyepka, p. jerabek, j. vevodova, m. bohac, j. damborsky
  Keywords: 1,2,3-trichloropropane, hydrolase, alpha/beta-hydrolase
  
• 2bgx.pdb. hydrolase 22-dec-04 2bgx Zn
  Title: crystal structure of native amid at 1.8 angstrom
  Author: s. petrella, r. herman, c. genereux, a. pennartz, e. sauvage, b. joris, p. charlier
  Keywords: e. coli, pgrp, t7 lysozyme, ampd, n-acetylmuroamyl-l-alanine amidase, hydrolase
  
• 2bh0.pdb. expansin related protein 21-dec-04 2bh0 Se
  Title: crystal structure of a semet derivative of expa from bacillus subtilis at 2.5 angstrom
  Author: s. petrella, r. herman, e. sauvage, p. filee, b. joris, p. charlier
  Keywords: expansins
  
• 2bic.pdb. plant pathogen 20-jan-05 2bic (NMR, 20 structures)
  Title: the solution structure of the recombinant elicitor protein pcf from the oomycete pathogen p. cactorum
  Author: g. nicastro, g. orsomando, f. desario, e. ferrari, l. manconi, a. spisni, s. ruggieri
  Keywords: oomycete plant pathogen, elicitin family
  
• 2bkn.pdb. membrane protein 17-feb-05 2bkn Cs
  Title: structure analysis of unknown function protein
  Author: e. inagaki, t. h. tahirov
  Keywords: membrane protein
  
• 2bko.pdb. hypothetical protein 17-feb-05 2bko Cl Ca
  Title: structure analysis of unknown function protein
  Author: e. inagaki, t. h. tahirov
  Keywords: hypothetical protein
  
• 2bkp.pdb. hypothetical protein 17-feb-05 2bkp K
  Title: structure analysis of unknown function protein
  Author: e. inagaki, t. h. tahirov
  Keywords: hypothetical protein
  
• 2bmk.pdb. immune system 14-mar-05 2bmk I
  Title: fab fragment of plp-dependent catalytic antibody 15a9 in complex with phosphopyridoxyl-d-alanine
  Author: b. golinelli-pimpaneau, p. christen
  Keywords: transamination, pyridoxal-phosphate, hapten, phosphopyridoxyl-l-lysine, immune system
  
• 2c44.pdb. lyase 15-oct-05 2c44 K
  Title: crystal structure of e. coli tryptophanase
  Author: s. -y. ku, p. yip, p. l. howell
  Keywords: pyridoxal phosphate, tryptophan catabolism
  
• 2c7j.pdb. electron transport 24-nov-05 2c7j
  Title: phycoerythrocyanin from mastigocladus laminosus, 295 k, 3.0 a
  Author: m. schmidt, a. krasselt, w. reuter
  Keywords: phycoviolobilin, phycocyanobilin, bile pigment, chromophore, electron transport, photosynthesis, phycobilisome
  
• 2c7k.pdb. electron transport 24-nov-05 2c7k
  Title: laue structure of phycoerythrocyanin from mastigocladus laminosus
  Author: m. schmidt, a. krasselt, w. reuter
  Keywords: phycoviolobilin, phycocyanobilin, bile pigment, chromophore, electron transport, photosynthesis, phycobilisome, antenna protein
  
• 2c7l.pdb. electron transport 25-nov-05 2c7l
  Title: low temperature structure of phycoerythrocyanin from mastigocladus laminosus
  Author: m. schmidt, a. krasselt, w. reuter
  Keywords: phycoviolobilin, phycocyanobilin, bile pigment, chromophore, electron transport, photosynthesis, phycobilisome, antenna protein
  
• 2c82.pdb. oxidoreductase 30-nov-05 2c82
  Title: x-ray structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase, dxr, rv2870c, from mycobacterium tuberculosis
  Author: l. m. henriksson, c. bjorkelid, s. l. mowbray, t. unge
  Keywords: rv2870c, doxp/mep pathway, oxidoreductase, isoprene biosynthesis, metal-binding, nadp
  
• 2ca6.pdb. signaling regulator 17-dec-05 2ca6
  Title: miras structure determination from hemihedrally twinned crystals
  Author: r. c. hillig, l. renault
  Keywords: signaling regulator
  
• 2ca8.pdb. transferase 20-dec-05 2ca8
  Title: structure of sh28gst in complex with gsh at ph 6.0
  Author: p. baiocco, l. j. gourlay, f. angelucci, a. bellelli, a. e. miele, m. brunori
  Keywords: detoxification, glutathione, prostaglandin d2 synthase, transferase
  
• 2ccq.pdb. glycoprotein 17-jan-06 2ccq
  Title: the n-terminal domain of p97
  Author: m. d. allen, a. buchberger, m. bycroft
  Keywords: glycanase homolog
  
• 2ccw.pdb. electron transport (cuproprotein) 18-jan-06 2ccw Cu
  Title: crystal structure of azurin ii at atomic resolution (1.13 angstrom)
  Author: k. paraskevopoulos, m. a. hough, r. r. eady, s. s. hasnain
  Keywords: alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport, cuproprotein,copper, metal-binding, periplasmic
  
• 2cd7.pdb. hydrolase 23-jan-06 2cd7 Na
  Title: staphylococcus aureus pi258 arsenate reductase (arsc) h62q mutant
  Author: l. buts, g. roos, k. van belle, e. brosens, r. loris, l. wyns, j. messens
  Keywords: detoxification, ptpase i fold, arsenical resistance, hydrolase, redox-active center
  
• 2chd.pdb. protein transport 14-mar-06 2chd
  Title: crystal structure of the c2a domain of rabphilin-3a
  Author: m. biadene, p. montaville, g. m. sheldrick, s. becker
  Keywords: c2 domain, c2a, calcium binding, synaptic exocytosis, metal-binding, protein transport, synapse, transport, zinc, zinc-finger
  
• 2ci8.pdb. sh2-domain 17-mar-06 2ci8
  Title: sh2 domain of human nck1 adaptor protein - uncomplexed
  Author: s. frese, w. -d. schubert, a. c. findeis, t. marquardt, y. s. roske, t. e. b. stradal, d. w. heinz
  Keywords: sh3 domain, phosphorylation, binding specificity, host-pathogen, interactions
  
• 2ci9.pdb. sh2-domain/complex 17-mar-06 2ci9
  Title: nck1 sh2-domain in complex with a dodecaphosphopeptide from epec protein tir
  Author: s. frese, w. -d. schubert, a. c. findeis, t. marquardt, y. s. roske, t. e. b. stradal, d. w. heinz
  Keywords: sh2-domain, sh3 domain, phosphorylation, binding specificity, host-pathogen
  
• 2cia.pdb. sh2-domain 17-mar-06 2cia
  Title: human nck2 sh2-domain in complex with a decaphosphopeptide from translocated intimin receptor (tir) of epec
  Author: s. frese, w. -d. schubert, a. c. findeis, t. marquardt, y. s. roske, t. e. b. stradal, d. w. heinz
  Keywords: sh3 domain, phosphorylation, binding specificity
  
• 2cim.pdb. ligase 24-mar-06 2cim Cl Pt Zn
  Title: crystal structure of methanosarcina barkeri seryl-trna synthetase
  Author: s. bilokapic, t. maier, d. ahel, i. gruic-sovulj, d. soll, i. weygand-durasevic, n. ban
  Keywords: trna synthetase, zinc ion
  
• 2cj9.pdb. ligase 29-mar-06 2cj9 Cl Zn
  Title: crystal structure of methanosarcina barkeri seryl-trna synthetase complexed with an analog of seryladenylate
  Author: s. bilokapic, t. maier, d. ahel, i. gruic-sovulj, d. soll, i. weygand-durasevic, n. ban
  Keywords: zinc ion, seryladenylate, trna synthetase,
  
• 2cja.pdb. ligase 30-mar-06 2cja Cl Mg Zn Se
  Title: crystal structure of methanosarcina barkeri seryl-trna synthetase complexed with atp
  Author: s. bilokapic, t. maier, d. ahel, i. gruic-sovulj, d. soll, i. weygand-durasevic, n. ban
  Keywords: zinc ion, trna synthetase,
  
• 2cjb.pdb. ligase 30-mar-06 2cjb Cl Zn
  Title: crystal structure of methanosarcina barkeri seryl-trna synthetase complexed with serine
  Author: s. bilokapic, t. maier, d. ahel, i. gruic-sovulj, d. soll, i. weygand-durasevic, n. ban
  Keywords: trna synthetase, zinc ion, serine
  
• 2cjk.pdb. rna-binding protein 04-apr-06 2cjk (NMR, 25 structures)
  Title: structure of the rna binding domain of hrp1 in complex with rna
  Author: j. m. perez-canadillas
  Keywords: rna-binding, rna processing, mrna processing, nonsense-mediated mrna decay, cleavage, polyadenylation, nuclear protein, rna-binding protein
  
• 2cju.pdb. immune system 09-apr-06 2cju
  Title: crystal structure of the tepc15-vk45.1 anti-2-phenyl-5- oxazolone nq16-113.8 scfv in complex with phoxgaba
  Author: c. scotti, e. gherardi
  Keywords: antibody, immunoglobulin, 2-phenyl-5-oxazolone, immunoglobulin domain, immune system
  
• 2cjv.pdb. immune systyem 09-apr-06 2cjv
  Title: crystal structure of the tepc15-vk45.1 anti-2-phenyl-5- oxazolone nq10-1.12 scfv in complex with phoxgaba
  Author: c. scotti, e. gherardi
  Keywords: antibody, immunoglobulin, 2-phenyl-5-oxazolone, immunoglobulin domain, immune systyem
  
• 2cjx.pdb. complex (hydrolase-inhibitor) 09-apr-06 2cjx
  Title: extended substrate recognition in caspase-3 revealed by high resolution x-ray structure analysis
  Author: r. ganesan, p. r. e. mittl, s. jelakovic, m. g. grutter
  Keywords: complex (hydrolase-inhibitor)
  
• 2cjy.pdb. complex (hydrolase-inhibitor) 09-apr-06 2cjy
  Title: extended substrate recognition in caspase-3 revealed by high resolution x-ray structure analysis
  Author: r. ganesan, p. r. e. mittl, s. jelakovic, m. g. grutter
  Keywords: complex (hydrolase-inhibitor)
  
• 2cki.pdb. hydrolase 19-apr-06 2cki Zn Ca Se
  Title: structure of ulilysin, a member of the pappalysin family of metzincin metalloendopeptidases.
  Author: c. tallant, r. garcia-castellanos, j. seco, u. baumann, f. x. gomis-ruth
  Keywords: hypothetical protein, hydrolase, igf, cancer, metzincin, pappalysin, igfbp protease
  
• 2cl1.pdb. transferase 25-apr-06 2cl1 Cl
  Title: human nek2 kinase with pyrrole-indolinone ligand
  Author: a. c. w. pike, p. rellos, s. das, o. fedorov, e. papagrigoriou, j. e. debreczeni, a. p. turnbull, f. gorrec, j. bray, m. sundstrom, c. arrowsmith, a. edwards, j. weigelt, f. von delft, s. knapp
  Keywords: magnesium, cell cycle
  
• 2cl5.pdb. transferase 26-apr-06 2cl5 Mg
  Title: catechol-o-methyltransferase in complex with an inhibitor
  Author: p. n. palma, m. l. rodrigues, m. archer, m. j. bonifacio, a. i. loureiro, d. learmonth, m. a. carrondo, p. soares-da-silva
  Keywords: metal-binding
  
• 2cly.pdb. hydrolase 03-may-06 2cly
  Title: subcomplex of the stator of bovine mitochondrial atp synthase
  Author: v. kane dickson, j. a. silvester, i. m. fearnley, a. g. w. leslie, j. e. walker
  Keywords: mitochondrion, ion transport, cf(0), stator, transport, acetylation, atp synthase, hydrogen ion transport,transit peptide, peripheral stalk, hydrolase
  
• 2cm0.pdb. transferase 03-may-06 2cm0
  Title: the n-terminal domain of p97
  Author: m. d. allen, a. buchberger, m. bycroft
  Keywords: kinase, pug domain
  
• 2cn5.pdb. transferase 18-may-06 2cn5 Cl Mg
  Title: crystal structure of human chk2 in complex with adp
  Author: a. w. oliver, l. h. pearl
  Keywords: disease mutation, magnesium, metal-binding, nuclear protein, nucleotide- binding, proto-oncogene, serine/threonine-protein kinase, transferase
  
• 2cn8.pdb. transferase 18-may-06 2cn8 Mg
  Title: crystal structure of human chk2 in complex with debromohymenialdisine
  Author: a. w. oliver, l. h. pearl
  Keywords: nucleotide-binding, hypothetical protein
  
• 2cny.pdb. fibril protein 25-may-06 2cny
  Title: salmonella enterica safa pilin in complex with a 19-residue safa nte peptide (i15a mutant)
  Author: h. remaut, r. j. rose, t. j. hannan, s. j. hultgren, s. e. radford, a. e. ashcroft, g. waksman
  Keywords: fibril protein, fold complementation
  
• 2cnz.pdb. fibril protein 25-may-06 2cnz
  Title: salmonella enterica safa pilin in complex with a 19-residue safa nte peptide (v13a mutant)
  Author: h. remaut, r. j. rose, t. j. hannan, s. j. hultgren, s. e. radford, a. e. ashcroft, g. waksman
  Keywords: fibril protein, fold complementation
  
• 2co1.pdb. fibril protein 25-may-06 2co1
  Title: salmonella enterica safa pilin in complex with a 19-residue safa nte peptide (f17a mutant)
  Author: h. remaut, r. j. rose, t. j. hannan, s. j. hultgren, s. e. radford, a. e. ashcroft, g. waksman
  Keywords: fibril protein, fold complementation
  
• 2co2.pdb. fibril protein 25-may-06 2co2
  Title: salmonella enterica safa pilin in complex with a 19-residue safa nte peptide (f3a mutant)
  Author: h. remaut, r. j. rose, t. j. hannan, s. j. hultgren, s. e. radford, a. e. ashcroft, g. waksman
  Keywords: fibril protein, fold complementation
  
• 2co3.pdb. fibril protein 25-may-06 2co3
  Title: salmonella enterica safa pilin, head-to-tail swapped dimer of ntd1 mutant
  Author: h. remaut, r. j. rose, t. j. hannan, s. j. hultgren, s. e. radford, a. e. ashcroft, g. waksman
  Keywords: adhesion, pathogenesis, fibril protein, fold complementation
  
• 2co4.pdb. fibril protein 25-may-06 2co4
  Title: salmonella enterica safa pilin in complex with a 19-residue safa nte peptide
  Author: h. remaut, r. j. rose, t. j. hannan, s. j. hultgren, s. e. radford, a. e. ashcroft, g. waksman
  Keywords: fibril protein, fold complementation
  
• 2co6.pdb. fibril protein 25-may-06 2co6
  Title: salmonella enterica safa pilin in complex with the safb chaperone (type i)
  Author: h. remaut, r. j. rose, t. j. hannan, s. j. hultgren, s. e. radford, a. e. ashcroft, g. waksman
  Keywords: adhesion, strand complementation, pathogenesis, chaperone, fibril protein
  
• 2co7.pdb. fibril protein 25-may-06 2co7
  Title: salmonella enterica safa pilin in complex with the safb chaperone (type ii)
  Author: h. remaut, r. j. rose, t. j. hannan, s. j. hultgren, s. e. radford, a. e. ashcroft, g. waksman
  Keywords: chaperone, adhesion, strand complementation, pathogenesis, fibril protein
  
• 2cw2.pdb. oxidoreductase 16-jun-05 2cw2 Fe
  Title: crystal structure of superoxide dismutase from p. marinus
  Author: o. a. asojo, e. schott, g. vasta, a. m. silva
  
  
• 2cw3.pdb. oxidoreductase 16-jun-05 2cw3 Fe
  Title: x-ray structure of pmsod2, superoxide dismutase from perkinsus marinus
  Author: o. a. asojo, e. schott, g. vasta, a. m. silva
  
  
• 2cwq.pdb. structural genomics, unknown function 23-jun-05 2cwq Se
  Title: crystal structure of conserved protein ttha0727 from thermus thermophilus hb8
  Author: k. ito, r. arai, e. fusatomi, t. kamo-uchikubo, s. kawaguchi, t. terada, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: all alpha, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2cxj.pdb. metal binding protein 30-jun-05 2cxj (NMR, 20 structures)
  Title: 3d solution structure of s100a13
  Author: s. vaithiyalingam, t. k. s. kumar, c. yu
  Keywords: structure, solution, fgf, non-classical secretion, calcium
  
• 2cy1.pdb. transcription 04-jul-05 2cy1
  Title: crystal structure of ape1850
  Author: r. shibata, y. bessho, t. umehara, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi
  
• 2czp.pdb. toxin 14-jul-05 2czp (NMR, 10 structures)
  Title: structural analysis of membrane-bound mastoparan-x by solid- state nmr
  Author: y. todokoro, t. fujiwara, i. yumen, k. fukushima, s. -w. kang, j. - s. park, t. kohno, k. wakamatsu, h. akutsu
  Keywords: mp-x, membrane bound, mast cell degranulation, venom, amidation, 3d-structure
  
• 2d68.pdb. cell cycle 10-nov-05 2d68
  Title: structure of the n-terminal domain of fop (fgfr1op) protein
  Author: a. mikolajka
  Keywords: dimer
  
• 2dc4.pdb. structural genomics, unknown function 28-dec-05 2dc4 Cl
  Title: structure of ph1012 protein from pyrococcus horikoshii ot3
  Author: b. bagautdinov, n. kunishima, riken structural genomics/proteomics initiative (rsgi)
  Keywords: hypothetical protein, x-ray diffraction, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2dc5.pdb. transferase 28-dec-05 2dc5 Se
  Title: crystal structure of mouse glutathione s-transferase, mu7 (gstm7) at 1.6 a resolution
  Author: s. kamo, s. kishishita, k. murayama, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: glutathione s-transferase, riken structural genomics/proteomics initiative, rsgi, nppsfa, national project on protein structural and functional analyses
  
• 2ddt.pdb. hydrolase 02-feb-06 2ddt Mg
  Title: crystal structure of sphingomyelinase from bacillus cereus with magnesium ion
  Author: h. ago, m. oda, h. tsuge, n. katunuma, m. miyano, j. sakurai
  
  
• 2df3.pdb. cell adhesion 23-feb-06 2df3
  Title: the structure of siglec-7 in complex with alpha(2,3) /alpha(2,6) disialyl lactotetraosyl 2-(trimethylsilyl)ethyl
  Author: h. attrill
  Keywords: sialic acid, ganglioside
  
• 2df7.pdb. virus/viral protein 27-feb-06 2df7 Cl Ca
  Title: crystal structure of infectious bursal disease virus vp2 subviral particle
  Author: t. p. ko, c. c. lee, m. y. wang, a. h. wang
  Keywords: immunogen, epitope, calcium, surface loop
  
• 2dga.pdb. hydrolase 10-mar-06 2dga
  Title: crystal structure of hexameric beta-glucosidase in wheat
  Author: m. sue, k. yamazaki, t. miyamoto, s. yajima
  
  
• 2dge.pdb. electron transport 11-mar-06 2dge Zn Fe
  Title: crystal structure of oxidized cytochrome c6a from arabidopsis thaliana
  Author: h. chida, t. yokoyama, f. kawai, a. nakazawa, h. akazaki, y. takayama, t. hirano, k. suruga, t. satoh, s. yamada, r. kawachi, s. unzai, t. nishio, s. -y. park, t. oku
  Keywords: crystal structure, electron transfer, heme exposure, arabidopsis thaliana
  
• 2djy.pdb. ligase/signaling protein 06-apr-06 2djy (NMR, 30 structures)
  Title: solution structure of smurf2 ww3 domain-smad7 py peptide complex
  Author: p. a. chong, h lin, j. l. wrana, j. d. forman-kay
  Keywords: polyproline type ii helix, ppii
  
• 2dko.pdb. hydrolase 12-apr-06 2dko
  Title: extended substrate recognition in caspase-3 revealed by high resolution x-ray structure analysis
  Author: p. r. e. mittl, r. ganesan, s. jelakovic, m. g. grutter
  Keywords: caspase, drug design, radiation damage, tetrahedral intermediate, protease
  
• 2dlj.pdb. deoxyribonucleic acid 19-apr-06 2dlj Br Se
  Title: 2'-me-se and br derivitation of a-dna octamer g(ums)g(bru) acac
  Author: j. jiang, z. huang
  Keywords: se-dna, se-br-dna, selenium derivatization
  
• 2dpi.pdb. transferase/dna 12-may-06 2dpi Mg
  Title: ternary complex of hpoli with dna and dctp
  Author: d. t. nair, r. e. johnson, l. prakash, s. prakash, a. k. aggarwal
  Keywords: ethenoda adduct, lesion bypass
  
• 2dpj.pdb. transferase/dna 12-may-06 2dpj Mg
  Title: structure of hpoli with dna and dttp
  Author: d. t. nair, r. e. johnson, l. prakash, s. prakash, a. k. aggarwal
  Keywords: ethenoda adduct, lesion bypass, dttp
  
• 2dq7.pdb. transferase 23-may-06 2dq7
  Title: crystal structure of fyn kinase domain complexed with staurosporine
  Author: t. kinoshita, t. tada
  Keywords: kinase domain, staurosporine
  
• 2dru.pdb. immune system 15-jun-06 2dru
  Title: crystal structure and binding properties of the cd2 and cd244 (2b4) binding protein, cd48
  Author: e. j. evans, s. ikemizu, s. j. davis
  
  
• 2drw.pdb. hydrolase 15-jun-06 2drw Ba
  Title: the crystal structutre of d-amino acid amidase from ochrobactrum anthropi sv3
  Author: s. okazaki, a. suzuki, h. komeda, y. asano, t. yamane
  Keywords: d-stereospecific, amidase, hydrophobic
  
• 2ds9.pdb. metal binding protein 22-jun-06 2ds9 Zn Fe
  Title: structure of the complex of c-terminal lobe of bovine lactoferrin with mannose at 2.8 a resolution
  Author: r. mir, n. singh, m. sinha, s. sharma, a. bhushan, t. p. singh
  Keywords: complex
  
• 2euf.pdb. cell cycle/transferase 28-oct-05 2euf Ca
  Title: x-ray structure of human cdk6-vcyclin in complex with the inhibitor pd0332991
  Author: u. schulze-gahmen, h. lu
  
  
• 2f1n.pdb. toxin 14-nov-05 2f1n
  Title: structure of cdtb, the biologically active subunit of cytolethal distending toxin
  Author: j. s. hontz, m. d. yoder, l. a. dreyfus
  Keywords: cdt, e.coli, toxin, dnase i, microbatch
  
• 2f2c.pdb. cell cycle/transferase 16-nov-05 2f2c Cl
  Title: x-ray structure of human cdk6-vcyclinwith the inhibitor aminopurvalanol
  Author: u schulze-gahmen, h. lu
  
  
• 2f33.pdb. metal binding protein 18-nov-05 2f33 (NMR, 10 structures)
  Title: nmr solution structure of ca2+-loaded calbindin d28k
  Author: d. j. kojetin, r. a. venters, d. r. kordys, r. j. thompson, r. kumar, j. cavanagh
  Keywords: ca2+-binding
  
• 2f4v.pdb. ribosome 24-nov-05 2f4v Cl Mg K Zn
  Title: 30s ribosome + designer antibiotic
  Author: j. b. murray, s. o. meroueh, r. j. russell, g. lentzen, j. haddad, s. mobashery
  Keywords: designer antibiotic
  
• 2f7o.pdb. hydrolase 01-dec-05 2f7o Zn
  Title: golgi alpha-mannosidase ii complex with mannostatin a
  Author: d. a. kuntz, d. r. rose
  
  
• 2f7p.pdb. hydrolase 01-dec-05 2f7p Zn
  Title: golgi alpha-mannosidase ii complex with benzyl-mannostatin a
  Author: d. a. kuntz, d. r. rose
  
  
• 2f7x.pdb. transferase 01-dec-05 2f7x
  Title: protein kinase a bound to (s)-2-(1h-indol-3-yl)-1-[5-((e)-2- pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
  Author: q. li, t. li, g. d. zhu, j. gong, a. claibone, c. dalton, y. luo, e. f. johnson, y. shi, x. liu, v. klinghofer, j. l. bauch, k. c. marsh, j. j. bouska, s. arries, r. de jong, t. oltersdorf, v. s. stoll, c. g. jakob, s. h. rosenberg, v. l. giranda
  Keywords: akt inhibitors
  
• 2f7z.pdb. transferase 01-dec-05 2f7z
  Title: protein kinase a bound to (r)-1-(1h-indol-3-ylmethyl)-2-(2- pyridin-4-yl-[1,7]naphtyridin-5-yloxy)-ehylamine
  Author: q. li, k. w. woods, s. thomas, g. d. zhu, g. packard, j. fisher, t. li, j. gong, j. dinges, x. song, j. abrams, y. luo, e. f. johnson, y. shi, x. liu, v. klinghofer, r. des jong, t. oltersdorf, v. s. stoll, c. g. jakob, s. h. rosenberg, v. l. giranda
  Keywords: akt inhibitors
  
• 2f8f.pdb. transferase 02-dec-05 2f8f
  Title: crystal structure of the y10f mutant of the gluathione s- transferase from schistosoma haematobium
  Author: l. j. gourlay, p. baiocco, f. angelucci, a. e. miele, a. bellelli, m. brunori
  Keywords: homodimer, protein_gtt complex
  
• 2fbk.pdb. transcription 09-dec-05 2fbk Cl
  Title: the crystal structure of hucr from deinococcus radiodurans
  Author: t. bordelon, s. p. wilkinson, a. grove, m. e. newcomer
  
  
• 2fe4.pdb. hydrolase 15-dec-05 2fe4 Mg
  Title: the crystal structure of human neuronal rab6b in its inactive gdp-bound form
  Author: i. garcia-saez, f. tcherniuk, f. kozielski
  
  
• 2ffd.pdb. blood clotting 19-dec-05 2ffd Ca
  Title: fibrinogen fragment d with "a" knob peptide mimic gprvve
  Author: l. betts
  
  
• 2ffq.pdb. hydrolase 20-dec-05 2ffq Mg
  Title: the crystal structure of human neuronal rab6b in its active gtpgs-bound form
  Author: i. garcia-saez, s. tcherniuk, f. kozielski
  
  
• 2ffr.pdb. transferase 20-dec-05 2ffr
  Title: crystallographic studies on n-azido-beta-d- glucopyranosylamine, an inhibitor of glycogen phosphorylase: comparison with n-acetyl-beta-d- glucopyranosylamine
  Author: e. i. petsalakis, e. d. chrysina, c. tiraidis, t. hadjiloi, d. d. leonidas, n. g. oikonomakos, u. aich, b. varghese, d. loganathan
  Keywords: inhibition, type 2 diabetes, crystallography
  
• 2fg4.pdb. metal binding protein 21-dec-05 2fg4 Cd
  Title: structure of human ferritin l chain
  Author: z. wang, c. li, m. ellenburg, j. ruble, j. x. ho, d. c. carter
  
  
• 2fg8.pdb. metal binding protein 21-dec-05 2fg8 Cs
  Title: structure of human ferritin l chain
  Author: z. m. wang, c. li, m. p. ellenburg, j. r. ruble, j. x. ho, d. c. carter
  
  
• 2fi7.pdb. protein binding 28-dec-05 2fi7
  Title: crystal structure of pilf : functional implication in the type 4 pilus biogenesis in pseudomonas aeruginosa
  Author: k. kim
  Keywords: tpr, pseudomonas aeruginosa, type 4 pilus, crystal structure
  
• 2fjp.pdb. hydrolase 03-jan-06 2fjp F
  Title: human dipeptidyl peptidase iv/cd26 in complex with an inhibitor
  Author: g. scapin, s. b. patel, j. w. becker
  Keywords: beta-propeller, dimer
  
• 2flo.pdb. hydrolase 06-jan-06 2flo Se
  Title: crystal structure of exopolyphosphatase (ppx) from e. coli o157:h7
  Author: e. s. rangarajan, m. cygler, a. matte, montreal-kingston bacterial structural genomics initiative (bsgi)
  Keywords: ppx/gppa, metaphosphatase, structural genomics, bacterial structural genomics, montreal-kingston bacterial structural genomics initiative, bsgi
  
• 2fuj.pdb. hydrolase 27-jan-06 2fuj
  Title: a putative acyl-coa thioesterase from xanthomonas campestris (xc229)
  Author: k. h. chin, c. c. chou, a. h. j. wang, s. h. chou
  Keywords: structural genomics, x-ray diffraction, conserved hypothetical protein, hot dog domain, acyl-coa thioesterase
  
• 2fuk.pdb. hydrolase 27-jan-06 2fuk
  Title: crystal structure of xc6422 from xanthomonas campestris: a member of a/b serine hydrolase without lid at 1.6 resolution
  Author: c. y. yang, k. h. chin, c. c. chou, a. h. j. wang, s. h. chou
  Keywords: xanthomonas campestris, structural genomics, x-ray diffraction
  
• 2fv5.pdb. hydrolase 30-jan-06 2fv5 Zn
  Title: crystal structure of tace in complex with ik682
  Author: p. orth, x. niu
  
  
• 2g0r.pdb. transport protein 13-feb-06 2g0r Fe
  Title: unphotolyzed co-bound l29f myoglobin
  Author: r. aranda, e. j. levin, f. schotte, p. a. anfinrud, g. n. phillips
  
  
• 2g0s.pdb. transport protein 13-feb-06 2g0s Fe
  Title: unphotolyzed co-bound l29f myoglobin, crystal 2
  Author: r. aranda, e. j. levin, f. schotte, p. a. anfinrud, g. n. phillips
  
  
• 2g0v.pdb. transport protein 13-feb-06 2g0v Fe
  Title: photolyzed co l29f myoglobin: 100ps
  Author: r. aranda, e. j. levin, f. schotte, p. a. anfinrud, g. n. phillips
  Keywords: myoglobin; difference refinement; structure-function relationship; intermediate states
  
• 2g0x.pdb. transport protein 13-feb-06 2g0x Fe
  Title: photolyzed co l29f myoglobin: 316ps
  Author: r. aranda, e. j. levin, f. schotte, p. a. anfinrud, g. n. phillips
  
  
• 2g0z.pdb. transport protein 13-feb-06 2g0z Fe
  Title: photolyzed co l29f myoglobin: 1ns
  Author: r. aranda, e. j. levin, f. schotte, p. a. anfinrud, g. n. phillips
  
  
• 2g10.pdb. transport protein 13-feb-06 2g10 Fe
  Title: photolyzed co l29f myoglobin: 3.16ns
  Author: r. aranda, e. j. levin, f. schotte, p. a. anfinrud, g. n. phillips
  
  
• 2g11.pdb. transport protein 13-feb-06 2g11 Fe
  Title: photolyzed co l29f myoglobin: 31.6ns
  Author: r. aranda, e. j. levin, f. schotte, p. a. anfinrud, g. n. phillips
  
  
• 2g12.pdb. transport protein 13-feb-06 2g12 Fe
  Title: photolyzed co l29f myoglobin: 316ns
  Author: r. aranda, e. j. levin, f. schotte, p. a. anfinrud, g. n. phillips
  
  
• 2g14.pdb. transport protein 13-feb-06 2g14 Fe
  Title: photolyzed co l29f myoglobin: 3.16us
  Author: r. aranda, e. j. levin, f. schotte, p. a. anfinrud, g. n. phillips
  
  
• 2g2u.pdb. hydrolase/hydrolase inhibitor 16-feb-06 2g2u
  Title: crystal structure of the shv-1 beta-lactamase/beta- lactamase inhibitor protein (blip) complex
  Author: k. a. reynolds, j. m. thomson, k. d. corbett, c. r. bethel, j. m. berger, j. f. kirsch, r. a. bonomo, t. m. handel
  Keywords: beta-lactamase inhibitor, protein-protein complex, blip, shv-1
  
• 2g2w.pdb. hydrolase/hydrolase inhibitor 16-feb-06 2g2w
  Title: crystal structure of the shv d104k beta-lactamase/beta- lactamase inhibitor protein (blip) complex
  Author: k. a. reynolds, j. m. thomson, k. d. corbett, c. r. bethel, j. m. berger, j. f. kirsch, r. a. bonomo, t. m. handel
  Keywords: beta-lactamase inhibitor, protein-protein complex, blip, shv
  
• 2g5p.pdb. hydrolase 23-feb-06 2g5p
  Title: crystal structure of human dipeptidyl peptidase iv (dppiv) complexed with cyanopyrrolidine (c5-pro-pro) inhibitor 21ac
  Author: k. l. longenecker, e. h. fry, m. r. lake, l. r. solomon, z. pei, x. li
  Keywords: beta-propeller
  
• 2g5r.pdb. cell adhesion 23-feb-06 2g5r
  Title: crystal structure of siglec-7 in complex with methyl-9- (aminooxalyl-amino)-9-deoxyneu5ac (oxamido-neu5ac)
  Author: h. attrill, p. r. crocker, d. m. van aalten
  Keywords: sialic acid, sialoside
  
• 2g5t.pdb. hydrolase 23-feb-06 2g5t Cl
  Title: crystal structure of human dipeptidyl peptidase iv (dppiv) complexed with cyanopyrrolidine (c5-pro-pro) inhibitor 21ag
  Author: k. l. longenecker, e. h. fry, m. r. lake, l. r. solomon, z. pei, x. li
  Keywords: beta-propeller
  
• 2g5w.pdb. oxidoreductase 23-feb-06 2g5w
  Title: x-ray crystal structure of arabidopsis thaliana 12- oxophytodienoate reductase isoform 3 (atopr3) in complex with 8-iso prostaglandin a1 and its cofactor, flavin mononucleotide.
  Author: b. w. han, t. e. malone, c. a. bingman, g. e. wesenberg, g. n. phillips jr. , b. g. fox, center for eukaryotic structural genomics (cesg)
  Keywords: psi, center for eukaryotic structural genomics, cesg
  
• 2g63.pdb. hydrolase 24-feb-06 2g63
  Title: crystal structure of human dipeptidyl peptidase iv (dppiv) complexed with cyanopyrrolidine (c5-pro-pro) inhibitor 24b
  Author: k. l. longenecker, e. h. fry, m. r. lake, l. r. solomon, z. pei, x. li
  Keywords: beta-propeller
  
• 2g7o.pdb. dna binding protein 28-feb-06 2g7o
  Title: protonation-mediated structural flexibility in the f conjugation regulatory protein, tram
  Author: j. lu, r. a. edwards, j. j. wong, j. manchak, p. g. scott, l. s. frost, j. n. glover
  Keywords: tetramer
  
• 2g93.pdb. metal binding protein 05-mar-06 2g93 Zn Fe
  Title: ligand recognition site in c-lobe of lactoferrin: crystal structure of the complex of c-lobe of bovine lactoferrin with methyl alpha-d-mannopyranoside at 1.9 a resolution
  Author: n. singh, s. sharma, t. p. singh
  Keywords: sugar binding
  
• 2g9b.pdb. metal binding protein 06-mar-06 2g9b (NMR, 10 structures)
  Title: nmr solution structure of ca2+-loaded calbindin d28k
  Author: d. j. kojetin, r. a. venters, d. r. kordys, r. j. thompson, r. kumar, j. cavanagh
  Keywords: ca2+-binding
  
• 2g9e.pdb. dna binding protein 06-mar-06 2g9e
  Title: protonation-mediated structural flexibility in the f conjugation regulatory protein, tram
  Author: j. lu, r. a. edwards, j. j. wong, j. manchak, p. g. scott, l. s. frost, j. n. glover
  Keywords: tetramer, e88l mutant
  
• 2g9m.pdb. electron transport 07-mar-06 2g9m
  Title: crystal structure of the pigment protein phycoerythrin from cyanobacterium at 2.6a resolution
  Author: m. i. hassan, a. s. ethayathulla, b. soni, d. madamwar, p. kaur, t. p. singh
  Keywords: monomer, crystal structure, cyanobacterium
  
• 2gbc.pdb. hydrolase 10-mar-06 2gbc
  Title: native dpp-iv (cd26) from rat
  Author: k. l. longenecker, c. g. jakob, e. h. fry, s. wilk
  
  
• 2gbf.pdb. hydrolase 10-mar-06 2gbf
  Title: rat dpp-iv with alkynyl cyanopyrrolidine #1
  Author: k. l. longenecker, c. g. jakob, e. h. fry, s. wilk
  
  
• 2gbg.pdb. hydrolase 10-mar-06 2gbg
  Title: rat dpp-iv with alkynyl cyanopyrrolidine #2
  Author: k. l. longenecker, c. g. jakob, e. h. fry, s. wilk
  
  
• 2gbi.pdb. hydrolase 10-mar-06 2gbi
  Title: rat dpp-iv with xanthine inhibitor 4
  Author: k. l. longenecker, c. g. jakob, e. h. fry, s. wilk
  
  
• 2gcu.pdb. hydrolase 14-mar-06 2gcu Fe
  Title: x-ray structure of gene product from arabidopsis thaliana at1g53580
  Author: j. g. mccoy, g. e. wesenberg, g. n. phillips jr. , e. bitto, c. a. bingman, center for eukaryotic structural genomics (cesg)
  Keywords: ethe1, structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg
  
• 2gdg.pdb. isomerase 16-mar-06 2gdg
  Title: crystal structure of covalently modified macrophage inhibitory factor
  Author: p. a. golubkov, m. l. hackert
  
  
• 2gdi.pdb. ribonucleic acid 16-mar-06 2gdi Mg K Na
  Title: crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphate
  Author: a. serganov
  Keywords: thiamine pyrophosphate
  
• 2gdj.pdb. recombination 16-mar-06 2gdj Mg
  Title: delta-62 rada recombinase in complex with amp-pnp and magnesium
  Author: y. wu, x. qian, y. he, y. luo
  Keywords: protein-atp complex
  
• 2ge2.pdb. deoxyribonucleic acid 17-mar-06 2ge2 (NMR, minimized average structure)
  Title: solution structure of the duplex dna containing the 3- (deoxyguanosin-n2-yl)-2-acetoaminofluorene
  Author: c. de los santos, t. zaliznyak
  Keywords: acetylaminofluoren (aaf)
  
• 2ge5.pdb. hydrolase/dna 17-mar-06 2ge5 Ca
  Title: ecorv restriction endonuclease c-terminal deletion mutant/gatatc/ca2+
  Author: d. a. hiller, j. j. perona
  
  
• 2ghz.pdb. electron transport 28-mar-06 2ghz Cu
  Title: crystal structure of azurin phe114pro mutant
  Author: s. yanagisawa, m. j. banfield, c. dennison
  Keywords: blue copper protein, metal binding site, greek-key fold
  
• 2gi0.pdb. electron transport 28-mar-06 2gi0 Cu
  Title: crystal structure of cu(i) phe114pro azurin mutant
  Author: s yanagisawa, m. j. banfield, c. dennison
  Keywords: blue copper protein, metal binding site
  
• 2gis.pdb. ribonucleic acid 29-mar-06 2gis Mg Ir
  Title: structure of the s-adenosylmethionine riboswitch mrna regulatory element
  Author: r. k. montange, r. t. batey
  Keywords: riboswitch, s-adenosylmethionine, sam, rna-ligand complex
  
• 2gj8.pdb. hydrolase 30-mar-06 2gj8 Mg F K Al Se
  Title: structure of the mnme g-domain in complex with gdp*alf4-, mg2+ and k+
  Author: a. scrima, a. wittinghofer
  Keywords: alpha-beta-sandwich
  
• 2gj9.pdb. hydrolase 30-mar-06 2gj9 Rb Mg F Al
  Title: structure of the mnme g-domain in complex with gdp*alf4-, mg2+ and rb+
  Author: a. scrima, a. wittinghofer
  Keywords: alpha-beta-sandwich
  
• 2gja.pdb. hydrolase 30-mar-06 2gja Mg F Al
  Title: structure of the mnme g-domain in complex with gdp*alf4-, mg2+ and nh4+
  Author: a. scrima, a. wittinghofer
  Keywords: alpha-beta-sandwich
  
• 2gjd.pdb. ligase 30-mar-06 2gjd
  Title: distinct functional domains of ubc9 dictate cell survival and resistance to genotoxic stress
  Author: r. c. van waardenburg, d. m. duda, c. s. lancaster, b. a. schulman, m. a. bjornsti
  Keywords: e2, smt3, saccharomyces cerevisiae, crystallography
  
• 2go3.pdb. hydrolase 12-apr-06 2go3 Cl Zn
  Title: crystal structure of aquifex aeolicus lpxc complexed with imidazole.
  Author: h. a. gennadios, d. a. whittington, x. li, c. a. fierke, d. w. christianson
  
  
• 2go4.pdb. hydrolase 12-apr-06 2go4 Cl Zn
  Title: crystal structure of aquifex aeolicus lpxc complexed with tu-514
  Author: h. a. gennadios, d. a. whittington, x. li, c. a. fierke, d. w. christianson
  
  
• 2gph.pdb. transferase 17-apr-06 2gph
  Title: docking motif interactions in the map kinase erk2
  Author: t. zhou, l. sun, j. humphreys, e. j. goldsmith
  Keywords: docking interaction, d-motif, allostery, cd-site, phosphatase-derived peptide, processing conformation
  
• 2gps.pdb. ligase 18-apr-06 2gps
  Title: crystal structure of the biotin carboxylase subunit, e23r mutant, of acetyl-coa carboxylase from escherichia coli.
  Author: y. shen, c. y. chou, g. g. chang, l. tong
  Keywords: carboxylase, biotin-dependent, fatty acid synthesis, dimer-interface mutant
  
• 2gpt.pdb. oxidoreductase, lyase 18-apr-06 2gpt
  Title: crystal structure of arabidopsis dehydroquinate dehydratase- shikimate dehydrogenase in complex with tartrate and shikimate
  Author: s. a. singh, d. christendat
  Keywords: aroe, shikimate dehydrogenase, arabidopsis thaliana, shikimate, tartrate, bifunctional enzyme
  
• 2gpw.pdb. ligase 18-apr-06 2gpw
  Title: crystal structure of the biotin carboxylase subunit, f363a mutant, of acetyl-coa carboxylase from escherichia coli.
  Author: y. shen, c. y. chou, g. g. chang, l. tong
  Keywords: carboxylase, biotin-dependent, fatty acid synthesis, dimer-interface mutant
  
• 2gpx.pdb. deoxyribonucleic acid 18-apr-06 2gpx Ba Br Se
  Title: 2'-me-se and br derivitation of a-dna octamer g(ums)g(bru) acac
  Author: j. jiang, z. huang
  Keywords: se-dna, se-br-dna, selenium derivatization
  
• 2gpz.pdb. hydrolase 19-apr-06 2gpz
  Title: transthyretin-like protein from salmonella dublin
  Author: a. m. buckle, r. h. law, j. c. whisstock
  
  
• 2gtx.pdb. hydrolase 28-apr-06 2gtx Mn Na
  Title: structural basis of catalysis by mononuclear methionine aminopeptidase
  Author: q. z ye
  Keywords: mn(ii)-form, hydrolase, enzyme-inhibitor complex, metalloenzyme
  
• 2gu1.pdb. hydrolase 28-apr-06 2gu1 Zn Na
  Title: crystal structure of a zinc containing peptidase from vibrio cholerae
  Author: r. sugadev, d. kumaran, s. swaminathan, new york structural genomics research consortium (nysgrc)
  Keywords: alpha/beta, beta barrel, structural genomics, psi, protein structure initiative, new york structural genomics research consortium, nysgrc
  
• 2gu2.pdb. hydrolase 28-apr-06 2gu2 Zn Se
  Title: crystal structure of an aspartoacylase from rattus norvegicus
  Author: e. bitto, g. e. wesenberg, g. n. phillips jr. , c. a. bingman, center for eukaryotic structural genomics (cesg)
  Keywords: aminoacylase-2, acy-2, acy2_rat, structural genomics, psi, protein structure initiative, center for eukaryotic structural genomics, cesg
  
• 2gu4.pdb. hydrolase 28-apr-06 2gu4 Mn Na
  Title: e. coli methionine aminopeptidase in complex with nlep, 1: 0.5, di-metalated
  Author: q. z. ye
  Keywords: mononuclear, mn(ii)-form, hydrolase, enzyme- inhibitor complex, metalloenzyme
  
• 2gu5.pdb. hydrolase 28-apr-06 2gu5 Mn Na
  Title: e. coli methionine aminopeptidase in complex with nlep, 1: 1, di-metalated
  Author: q. z. ye
  Keywords: mononuclear, mn(ii)-form, hydrolase, enzyme- inhibitor complex, metalloenzyme
  
• 2gu6.pdb. hydrolase 28-apr-06 2gu6 Mn Na
  Title: e. coli methionine aminopeptidase in complex with nlep, 1: 2, di-metalated
  Author: q. z. ye
  Keywords: mononuclear, mn(ii)-form, hydrolase, enzyme- inhibitor complex, metalloenzyme
  
• 2gu7.pdb. hydrolase 28-apr-06 2gu7 Mn Na
  Title: e. coli methionine aminopeptidase unliganded, 1:0.5
  Author: q. z. ye
  Keywords: mononuclear, mn(ii)-form, hydrolase, enzyme- inhibitor complex, metalloenzyme
  
• 2gvd.pdb. lyase 02-may-06 2gvd Cl Mn
  Title: complex of gs- with the catalytic domains of mammalian adenylyl cyclase: complex with tnp-atp and mn
  Author: t. -c. mou, s. r. sprang
  Keywords: gsa, tnp-atp
  
• 2gvz.pdb. lyase 03-may-06 2gvz Cl Mn
  Title: crystal structure of complex of gs- with the catalytic domains of mammalian adenylyl cyclase: complex with mant- atp and mn
  Author: t. -c. mou, s. r. sprang
  Keywords: mant-atp
  
• 2gwr.pdb. signaling protein 05-may-06 2gwr Ca Se
  Title: crystal structure of the response regulator protein mtra from mycobacterium tuberculosis
  Author: n. friedland, t. r. mack, m. yu, e. h. bursey, l. -w. hung, a. m. stock, g. s. waldo, t. c. terwilliger
  Keywords: transcription regulation, phosphorylation, dna-binding, ompr family
  
• 2h26.pdb. immune system 18-may-06 2h26
  Title: human cd1b in complex with endogenous phosphatidylcholine and spacer
  Author: l. f. garcia-alles, l. maveyraud, a. tesouro vallina, v. guillet, l. mourey
  Keywords: endogenous ligand, phosphatidylcholine, mhc, antigen presentation, glycoprotein
  
• 2h33.pdb. signaling protein 22-may-06 2h33 (NMR, 20 structures)
  Title: the structure of regulator of g-protein signalling 18 (rgs18) (casp target)
  Author: v. a. higman, m. leidert, j. bray, j. elkins, m. soundararajan, d. doyle, c. gileadi, c. phillips, g. schoch, x. yang, c. brockmann, p. schmieder, a. diehl, m. sundstrom, c. arrowsmith, j. weigelt, a. edwards, h. oschkinat, l. j. ball, structural genomics consortium (sgc)
  Keywords: helix bundle, structural genomics, structural genomics consortium, sgc
  
• 2h63.pdb. oxidoreductase 30-may-06 2h63
  Title: crystal structure of human biliverdin reductase a (casp target)
  Author: k. kavanagh, j. elkins, e. ugochukwu, k. guo, e. pilka, p. lukacik, c. smee, e. papagrigoriou, g. bunkoczi, m. sundstrom, c. arrowsmith, j. weigelt, a. edwards, f. von delft, u. oppermann, structural genomics consortium (sgc)
  Keywords: biliverdin reductase, blvra, structural genomics, structural genomics consortium, sgc
  
• 2h68.pdb. gene regulation 30-may-06 2h68
  Title: histone h3 recognition and presentation by the wdr5 module of the mll1 complex
  Author: a. j. ruthenburg, w. -k. wang, d. m. graybosch, h. li, c. d. allis, d. j. patel, g. l. verdine
  
  
• 2h6b.pdb. dna binding protein 31-may-06 2h6b Cl
  Title: crystal structure of oxidized cprk in complex with o- chlorophenolacetic acid
  Author: m. g. joyce, c. levy, d. leys
  Keywords: dna binding, chlorinated ligand, chlorophenol, cprk, helix-turn-helix
  
• 2h6c.pdb. dna binding protein 31-may-06 2h6c
  Title: crystal structure of reduced cprk in absence of any ligand
  Author: c. levy, d. leys
  Keywords: helix-turn-helix, chlorophenol, halorespiration, cprk
  
• 2h6k.pdb. gene regulation 31-may-06 2h6k
  Title: histone h3 recognition and presentation by the wdr5 module of the mll1 complex
  Author: a. j. ruthenburg, w. -k. wang, d. m. graybosch, h. li, c. d. allis, d. j. patel, g. l. verdine
  
  
• 2h6n.pdb. gene regulation 31-may-06 2h6n
  Title: histone h3 recognition and presentation by the wdr5 module of the mll1 complex
  Author: a. j. ruthenburg, w. -k. wang, d. m. graybosch, h. li, c. d. allis, d. j. patel, g. l. verdine
  
  
• 2h6q.pdb. gene regulation 01-jun-06 2h6q
  Title: histone h3 recognition and presentation by the wdr5 module of the mll1 complex
  Author: a. j. ruthenburg, w. -k. wang, d. m. graybosch, h. li, c. d. allis, d. j. patel, g. l. verdine
  
  
• 2h78.pdb. oxidoreductase 01-jun-06 2h78 Se
  Title: structural genomics, the crystal structure of a putative 3- hydroxyisobutyrate dehydrogenase from pseudomonas aeruginosa pao1
  Author: k. tan, e. evdokimova, m. kudritska, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: pseudomonas aeruginosa pa01, 3-hydroxyisobutyrate dehydrogenase, psi-2, structural genomics, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2h8o.pdb. transferase 07-jun-06 2h8o
  Title: the 1.6a crystal structure of the geranyltransferase from agrobacterium tumefaciens
  Author: r. zhang, x. xu, j. gu, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: agrobacterium tumefaciens, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2h94.pdb. oxidoreductase 08-jun-06 2h94 Hg
  Title: crystal structure and mechanism of human lysine-specific demethylase-1
  Author: p. stavropoulos, g. blobel, a. hoelz
  
  
• 2hae.pdb. oxidoreductase 12-jun-06 2hae Zn
  Title: crystal structure of a putative malic enzyme (malate oxidoreductase)
  Author: j. seetharaman, s. swaminathan, new york structural genomix research consortium (nysgxrc)
  Keywords: putative malic enzyme, malate:nad+ oxidoreductase, structural genomics, psi-2, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2haf.pdb. translation repressor 12-jun-06 2haf
  Title: crystal structure of a putative translation repressor from vibrio cholerae
  Author: r. sugadev, j. seetharaman, d. kumaran, s. swaminathan, new york structural genomics research consortium (nysgrc)
  Keywords: x-ray crystallography, translation repressor, structural genomics, psi, protein structure initiative, new york structural genomics research consortium, nysgrc
  
• 2hay.pdb. oxidoreductase 13-jun-06 2hay Se
  Title: the crystal structure of the putative nad(p)h-flavin oxidoreductase from streptococcus pyogenes m1 gas
  Author: y. kim, e. duggan, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 2hc7.pdb. deoxyribonucleic acid 15-jun-06 2hc7 Se
  Title: 2'-selenium-t a-dna [g(tse)gtacac]
  Author: j. jiang, j. sheng, z. huang
  Keywords: 2'-se-t-dna
  
• 2hci.pdb. immune system 16-jun-06 2hci
  Title: structure of human mip-3a chemokine
  Author: z. a. malik, b. f. tack
  Keywords: dimer, space group i4
  
• 2hcu.pdb. lyase 19-jun-06 2hcu
  Title: crystal structure of smu.273 from streptococcus mutans
  Author: z. q. gao, h. f. hou, l. f. li, y. h. liang, x. d. su, y. h. dong
  
  
• 2hd4.pdb. hydrolase 20-jun-06 2hd4 Ca
  Title: crystal structure of proteinase k inhibited by a lactoferrin octapeptide gly-asp-glu-gln-gly-glu-asn-lys at 2.15 a resolution
  Author: r. prem kumar, a. k. singh, n. singh, p. kaur, s. sharma, t. p. singh
  Keywords: complex, peptide complex, lactoferrin fragment
  
• 2he0.pdb. signaling protein 21-jun-06 2he0
  Title: crystal structure of a human notch1 ankyrin domain mutant
  Author: d. gupta, m. t. ehebauer, d. y. chirgadze, a. martinez arias, t. l. blundell
  Keywords: ankyrin, signalling
  
• 2he2.pdb. signaling protein 21-jun-06 2he2
  Title: crystal structure of the 3rd pdz domain of human discs large homologue 2, dlg2 (casp target)
  Author: a. p. turnbull, c. phillips, g. berridge, p. savitsky, c. e. a. smee, e. papagrigoriou, j. debreczeni, f. gorrec, j. m. elkins, f. von delft, j. weigelt, a. edwards, c. arrowsmith, m. sundstrom, d. doyle, structural genomics consortium (sgc)
  Keywords: pdz, pdz domain, signal transduction, structural genomics, structural genomics consortium, sgc
  
• 2he7.pdb. cell adhesion 21-jun-06 2he7
  Title: ferm domain of epb41l3 (dal-1)
  Author: b. m. hallberg, r. d. busam, c. arrowsmith, h. berglund, r. collins, a. edwards, m. ehn, s. flodin, a. flores, s. graslund, m. hammarstrom, l. h. schiavone, i. johansson, m. hogbom, t. karlberg, t. kotenyova, j. nilvebrandt, p. norberg, p. stenmark, p. nordlund, p. nilsson- ehle, t. nyman, d. ogg, j. sagemark, m. sundstrom, j. uppenberg, s. van den berg, j. weigelt, c. persson, a. g. thorsell, structural genomics consortium (sgc)
  Keywords: dal-1, epb41l3a, structural genomics, structural genomics consortium, sgc
  
• 2hei.pdb. transport protein 21-jun-06 2hei
  Title: crystal structure of human rab5b in complex with gdp
  Author: b. hong, l. shen, j. wang, w. tempel, r. landry, c. h. arrowsmith, a. m. edwards, m. sundstrom, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: rab, structural genomics, structural genomics consortium, sgc
  
• 2hek.pdb. structural genomics, unknown function 21-jun-06 2hek Cl Zn Br
  Title: crystal structure of o67745, a hypothetical protein from aquifex aeolicus at 2.0 a resolution.
  Author: v. oganesyan, j. jancarik, p. d. adams, r. kim, s. h. kim, berkeley structural genomics center (bsgc)
  Keywords: structural genomics, psi, protein structure initiative, berkeley structural genomics center, bsgc
  
• 2her.pdb. transferase 21-jun-06 2her Mg
  Title: cryptosporidium parvum farnesyl diphosphate synthase
  Author: m. chruszcz, j. d. artz, h. zheng, a. dong, j. dunford, j. lew, y. zhao, i. kozieradski, k. l. kavanaugh, u. opperman, m. sundstrom, j. weigelt, a. m. edwards, c. h. arrowsmith, a. bochkarev, r. hui, w. minor, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc
  
• 2hf8.pdb. hydrolase, metal binding protein 23-jun-06 2hf8 Mg Zn Se
  Title: crystal structure of hypb from methanocaldococcus jannaschii in the triphosphate form, in complex with zinc
  Author: r. gasper, a. scrima, a. wittinghofer
  Keywords: p-loop containing nucleoside triphosphate hydrolase
  
• 2hf9.pdb. hydrolase, metal binding protein 23-jun-06 2hf9 Mg Zn
  Title: crystal structure of hypb from methanocaldococcus jannaschii in the triphosphate form
  Author: r. gasper, a. scrima, a. wittinghofer
  Keywords: p-loop containing nucleoside triphosphate hydrolase
  
• 2ivy.pdb. structural genomics,unknown function 22-jun-06 2ivy
  Title: crystal structure of hypothetical protein sso1404 from sulfolobus solfataricus p2
  Author: x. yan, l. g carter, m. dorward, h. liu, s. a. mcmahon, m. oke, h. powers, m. f. white, j. h. naismith
  Keywords: rnai, crispr, sso1404, structural genomics, hypothetical protein, sulfolobus solfataricus, structural genomics,unknown function