Recent PDB releases or updates: week of 31 March 2006
- 1anp.pdb.
hypotensive hormone 06-apr-94 1anp
(NMR)
Title: solution conformation of an atrial natriuretic peptide variant selective for the type-a receptor
Author: w. j. fairbrother, r. s. mcdowell, b. c. cunningham
- 1cdb.pdb.
t lymphocyte adhesion glycoprotein 15-sep-93 1cdb
(NMR)
Title: structure of the glycosylated adhesion domain of human t lymphocyte glycoprotein cd2
Author: d. f. wyss, j. m. withka, m. a. recny, g. wagner
- 1ctn.pdb.
lyase (oxo-acid) 10-oct-94 1ctn
Title: crystal structure of a bacterial chitinase at 2.3 angstroms resolution
Author: a. perrakis, i. tews, z. dauter, k. s. wilson, c. e. vorgias
- 1d7p.pdb.
blood clotting 19-oct-99 1d7p
Title: crystal structure of the c2 domain of human factor viii at 1.5 a resolution at 1.5 a
Author: k. p. pratt, b. w. shen, b. l. stoddard
Keywords: blood clotting
- 1dky.pdb.
complex (molecular chaperone/peptide) 03-jun-96 1dky
(x-ray diffraction, single crystal)
Title: the substrate binding domain of dnak in complex with a substrate peptide, determined from type 2 native crystals
Author: x. zhu, x. zhao, w. f. burkholder, a. gragerov, c. m. ogata, m. e. gottesman, w. a. hendrickson
Keywords: heat shock protein 70 kda (hsp70), complex (molecular chaperone/peptide)
- 1j5p.pdb.
oxidoreductase 27-jun-02 1j5p
Title: crystal structure of aspartate dehydrogenase (tm1643) from thermotoga maritima at 1.9 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: aspartate dehydrogenase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1j5t.pdb.
lyase 03-jul-02 1j5t
Cl
Title: crystal structure of indole-3-glycerol phosphate synthase (tm0140) from thermotoga maritima at 3.0 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: structural genomics, jcsg, indole-3-glycerol phosphate synthase, psi, protein structure initiative, joint center for structural genomics
- 1j5u.pdb.
structural genomics, unknown function 03-jul-02 1j5u
Ca Se
Title: crystal structure of archease, possible chaperone (tm1083) from thermotoga maritima at 2.0 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tm1083, jcsg, archease, possible chaperone, psi, protein structure initiative, joint center for structural genomics
- 1j5w.pdb.
ligase 05-jul-02 1j5w
Se
Title: crystal structure of glycyl-trna synthetase alpha chain (tm0216) from thermotoga maritima at 1.95 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tm0216, jcsg, glycyl-trna synthetase alpha chain, psi, protein structure initiative, joint center for structural genomics
- 1j5x.pdb.
hydrolase 05-jul-02 1j5x
Se
Title: crystal structure of glucosamine-6-phosphate deaminase (tm0813) from thermotoga maritima at 1.8 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tm0813, glucosamine-6-phosphate deaminase, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1j5y.pdb.
transcription 05-jul-02 1j5y
K Ni Se
Title: crystal structure of transcriptional regulator (tm1602) from thermotoga maritima at 2.3 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tm1602, transcriptional regulator, biotin repressor family, jcsg, conserved hypothetical protein, psi, protein structure initiative, joint center for structural genomics
- 1j6o.pdb.
hydrolase 09-jul-02 1j6o
Se
Title: crystal structure of tatd-related deoxyribonuclease (tm0667) from thermotoga maritima at 1.8 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tm0667, tatd-related deoxyribonuclease, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1j6p.pdb.
hydrolase 09-jul-02 1j6p
Ni Se
Title: crystal structure of metal-dependent hydrolase of cytosinedemaniase/chlorohydrolase family (tm0936) from thermotoga maritima at 1.9 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tm0936, jcsg, metal-dependent hydrolase of cytosinedemaniase/chlorohydrolase family, psi, protein structure initiative, joint center for structural genomics
- 1j6r.pdb.
transferase 10-jul-02 1j6r
Title: crystal structure of activation (adomet binding) domain of methionine synthase (tm0269) from thermotoga maritima at 2.2 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tm0269, activation (adomet binding) domain of methionine synthase, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1msh.pdb.
cytokine (chemotactic) 25-jan-95 1msh
(NMR)
Author: k. -s. kim, i. clark-lewis, b. d. sykes
- 1o0w.pdb.
hydrolase 13-sep-02 1o0w
Title: crystal structure of ribonuclease iii (tm1102) from thermotoga maritima at 2.0 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: ribonuclease iii, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o0y.pdb.
lyase 13-sep-02 1o0y
Title: crystal structure of deoxyribose-phosphate aldolase (tm1559) from thermotoga maritima at 1.9 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: deoxyribose-phosphate aldolase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o12.pdb.
hydrolase 15-oct-02 1o12
Fe Se
Title: crystal structure of n-acetylglucosamine-6-phosphate deacetylase (tm0814) from thermotoga maritima at 2.5 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tm0814, n-acetylglucosamine-6- phosphate deacetylase, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o13.pdb.
structural genomics, unknown function 15-oct-02 1o13
Se
Title: crystal structure of probable nifb protein that is involved in femo-co biosynthesis tm1816 from thermotoga maritima at 1.83 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tm1816, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o14.pdb.
transferase 15-oct-02 1o14
Title: crystal structure of possible 1-phosphofructokinase (tm0828) from thermotoga maritima at 3.2 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tm0828, possible 1-phosphofructokinase, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o54.pdb.
transferase 13-aug-03 1o54
Cl
Title: crystal structure of sam-dependent o-methyltransferase (tm0748) from thermotoga maritima at 1.65 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: sam-dependent o-methyltransferase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o5i.pdb.
oxidoreductase 17-sep-03 1o5i
Title: crystal structure of 3-oxoacyl-(acyl carrier protein) reductase (tm1169) from thermotoga maritima at 2.50 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: 3-oxoacyl-(acyl carrier protein) reductase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o5j.pdb.
unknown function 19-sep-03 1o5j
Se
Title: crystal structure of periplasmic divalent cation tolerance protein (tm1056) from thermotoga maritima at 1.95 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: periplasmic divalent cation tolerance protein, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o5k.pdb.
lyase 22-sep-03 1o5k
Ca
Title: crystal structure of dihydrodipicolinate synthase (tm1521) from thermotoga maritima at 1.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: dihydrodipicolinate synthase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o5o.pdb.
transferase 03-oct-03 1o5o
Title: crystal structure of uracil phosphoribosyltransferase (tm0721) from thermotoga maritima at 2.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: uracil phosphoribosyltransferase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o5z.pdb.
ligase 10-oct-03 1o5z
Cl
Title: crystal structure of folylpolyglutamate synthase (tm0166) from thermotoga maritima at 2.10 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: folylpolyglutamate synthase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1o6a.pdb.
structural genomics, unknown function 24-oct-03 1o6a
Se
Title: crystal structure of the c-terminal fragment of the putative flagelar motor switch protein flin (tm0680a) from thermotoga maritima at 1.85 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative flagelar motor switch protein flin, c- terminal proteolytic fragment of tm0680a, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1pnh.pdb.
toxin 25-aug-93 1pnh
(NMR)
Title: solution structure of po5-nh2, a scorpion toxin analog with high affinity for the apamin-sensitive potassium channel
Author: s. meunier, j. -m. bernassau, j. -m. sabatier, m. -f. martin-*eauclaire, j. van rietschoten, c. cambillau, h. darbon
- 1pra.pdb.
gene regulating protein 18-nov-91 1pra
(NMR)
Title: determination of the nuclear magnetic resonance solution structure of the /dna$-binding domain (residues 1 to 69) of the 434 repressor and comparison with the x-ray crystal
Author: d. neri, m. billeter, k. wuthrich
- 1u0a.pdb.
hydrolase 13-jul-04 1u0a
Zn Ca
Title: crystal structure of the engineered beta-1,3-1,4- endoglucanase h(a16-m) in complex with beta-glucan tetrasaccharide
Author: o. j. gaiser, k. piotukh, m. n. ponnuswamy, a. planas, r. borriss, u. heinemann
Keywords: 3-1,4-beta-glucanase, protein-carbohydrate interaction, active-site variant, jellyroll architecture
- 1v1t.pdb.
adhesion/complex 23-apr-04 1v1t
Title: crystal structure of the pdz tandem of human syntenin in complex with tneykv peptide
Author: j. grembecka, t. cierpicki, y. devedjiev, d. cooper, u. derewenda, z. s. derewenda
Keywords: scaffolding protein
- 1vj0.pdb.
oxidoreductase 02-dec-03 1vj0
Zn
Title: crystal structure of alcohol dehydrogenase (tm0436) from thermotoga maritima at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: alcohol dehydrogenase, zinc-containing, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vjf.pdb.
structural genomics, unknown function 11-feb-04 1vjf
Cl Se
Title: crystal structure of putative dna-binding protein from caulobacter crescentus at 1.62 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative dna-binding protein, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vjg.pdb.
structural genomics, unknown function 19-feb-04 1vjg
Se
Title: crystal structure of putative lipase from the g-d-s-l family from nostoc sp. at 2.01 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative lipase from the g-d-s-l family, alr1529, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vjn.pdb.
hydrolase 11-mar-04 1vjn
Se
Title: crystal structure of zn-dependent hydrolase of metallo-beta- lactamase superfamily (tm0207) from thermotoga maritima at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: zn-dependent hydrolase of metallo-beta-lactamase superfamily tm0207, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vjp.pdb.
isomerase 17-mar-04 1vjp
Cl Mg
Title: crystal structure of myo-inositol-1-phosphate synthase- related protein (tm1419) from thermotoga maritima at 1.70 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: myo-inositol-1-phosphate synthase-related protein, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vjr.pdb.
hydrolase 22-mar-04 1vjr
Cl Ni Se
Title: crystal structure of 4-nitrophenylphosphatase (tm1742) from thermotoga maritima at 2.40 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: 4-nitrophenylphosphatase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vjt.pdb.
hydrolase 22-mar-04 1vjt
Se
Title: crystal structure of alpha-glucosidase (tm0752) from thermotoga maritima at 2.50 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: alpha-glucosidase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vjv.pdb.
hydrolase 29-mar-04 1vjv
Se
Title: crystal structure of ubiquitin carboxyl-terminal hydrolase 6 (yfr010w) from saccharomyces cerevisiae at 1.74 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: ubiquitin carboxyl-terminal hydrolase 6, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vjx.pdb.
structural genomics, unknown function 01-apr-04 1vjx
Se
Title: crystal structure of putative ferritin-like diiron- carboxylate protein (tm1526) from thermotoga maritima at 2.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative ferritin-like diiron-carboxylate protein, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vjz.pdb.
endoglucanase 08-apr-04 1vjz
Se
Title: crystal structure of endoglucanase (tm1752) from thermotoga maritima at 2.05 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: endoglucanase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vk2.pdb.
hydrolase 16-apr-04 1vk2
Fe Se
Title: crystal structure of uracil-dna glycosylase (tm0511) from thermotoga maritima at 1.90 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: uracil-dna glycosylase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vk3.pdb.
ligase 23-apr-04 1vk3
Cl Se
Title: crystal structure of phosphoribosylformylglycinamidine synthase ii (tm1246) from thermotoga maritima at 2.15 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: phosphoribosylformylglycinamidine synthase ii, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vk4.pdb.
transferase 26-apr-04 1vk4
Se
Title: crystal structure of pfkb carbohydrate kinase (tm0415) from thermotoga maritima at 1.91 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: pfkb carbohydrate kinase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vk6.pdb.
hydrolase 30-apr-04 1vk6
Zn Se
Title: crystal structure of nadh pyrophosphatase (1790429) from escherichia coli k12 at 2.20 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: nadh pyrophosphatase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vk8.pdb.
structural genomics, unknown function 05-may-04 1vk8
Se
Title: crystal structure of protein with possible role in cell wall biogenesis (tm0486) from thermotoga maritima at 1.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: protein with possible role in cell wall biogenesis, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vk9.pdb.
structural genomics, unknown function 06-may-04 1vk9
Zn Se
Title: crystal structure of hypothetical protein (tm1506) from thermotoga maritima at 2.70 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: hypothetical protein, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vkb.pdb.
structural genomics, unknown function 07-may-04 1vkb
Title: crystal structure of hypothetical protein from mus musculus at 1.90 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vkd.pdb.
structural genomics, unknown function 12-may-04 1vkd
Se
Title: crystal structure of hypothetical protein (tm1225) from thermotoga maritima at 2.10 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: hypothetical protein, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vke.pdb.
lyase 13-may-04 1vke
Title: crystal structure of carboxymuconolactone decarboxylase family protein possibly involved in antioxidative response (tm1620) from thermotoga maritima at 1.56 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: carboxymuconolactone decarboxylase family protein possibly involved in antioxidative response, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vkf.pdb.
transcription 13-may-04 1vkf
Se
Title: crystal structure of glycerol uptake operon antiterminator- related protein (tm1436) from thermotoga maritima at 1.65 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: glycerol uptake operon antiterminator-related protein, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vki.pdb.
structural genomics, unknown function 24-may-04 1vki
Title: crystal structure of hypothetical protein (atu3699) from agrobacterium tumefaciens at 1.60 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: atu3699, hypothetical protein, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vkk.pdb.
hormone/growth factor 27-may-04 1vkk
Title: crystal structure of glia maturation factor-gamma (gmfg) from mus musculus at 1.50 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: gmfg, glia maturation factor-gamma, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vkn.pdb.
oxidoreductase 11-jun-04 1vkn
Se
Title: crystal structure of n-acetyl-gamma-glutamyl-phosphate reductase (tm1782) from thermotoga maritima at 1.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: n-acetyl-gamma-glutamyl-phosphate reductase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vko.pdb.
isomerase 11-jun-04 1vko
Cl I K
Title: crystal structure of inositol-3-phosphate synthase (ce21227) from caenorhabditis elegans at 2.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: inositol-3-phosphate synthase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vku.pdb.
biosynthetic protein 18-jun-04 1vku
Se
Title: crystal structure of acyl carrier protein (tm0175) from thermotoga maritima at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: acyl carrier protein, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vkw.pdb.
structural genomics, unknown function 24-jun-04 1vkw
Se
Title: crystal structure of putative nitroreductase (tm1586) from thermotoga maritima at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative nitroreductase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vkz.pdb.
ligase 29-jun-04 1vkz
Se
Title: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from thermotoga maritima at 2.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: phosphoribosylamine--glycine ligase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vl0.pdb.
structural genomics, unknown function 30-jun-04 1vl0
Se
Title: crystal structure of dtdp-4-dehydrorhamnose reductase, rfbd ortholog (cac2315) from clostridium acetobutylicum at 2.05 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: dtdp-4-dehydrorhamnose reductase, rfbd ortholog, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vl1.pdb.
hydrolase 30-jun-04 1vl1
Title: crystal structure of 6-phosphogluconolactonase (tm1154) from thermotoga maritima at 1.70a resolution
Author: joint center for structural genomics (jcsg)
Keywords: 6-phosphogluconolactonase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vl2.pdb.
ligase 08-jul-04 1vl2
Title: crystal structure of argininosuccinate synthase (tm1780) from thermotoga maritima at 1.65 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: argininosuccinate synthase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vl4.pdb.
structural genomics, unknown function 09-jul-04 1vl4
Title: crystal structure of pmba-related protein (tm0727) from thermotoga maritima at 1.95 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: pmba-related protein, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vl5.pdb.
structural genomics, unknown function 09-jul-04 1vl5
Se
Title: crystal structure of hypothetical protein (bh2331) from bacillus halodurans at 1.95 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: 10174951, hypothetical protein, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vl6.pdb.
oxidoreductase 13-jul-04 1vl6
Se
Title: crystal structure of nad-dependent malic enzyme (tm0542) from thermotoga maritima at 2.61 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: nad-dependent malic enzyme, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vl7.pdb.
structural genomics, unknown function 13-jul-04 1vl7
Title: crystal structure of hypothetical protein (alr5027) from nostoc sp. at 1.50 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: alr5027, hypothetical protein, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vl8.pdb.
oxidoreductase 14-jul-04 1vl8
Mg
Title: crystal structure of gluconate 5-dehydrogenase (tm0441) from thermotoga maritima at 2.07 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: gluconate 5-dehydrogenase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vla.pdb.
oxidoreductase 15-jul-04 1vla
Se
Title: crystal structure of hydroperoxide resistance protein osmc (tm0919) from thermotoga maritima at 1.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: hydroperoxide resistance protein osmc, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vlc.pdb.
dehydrogenase 20-jul-04 1vlc
Cl
Title: crystal structure of 3-isopropylmalate dehydrogenase (tm0556) from thermotoga maritima at 1.90 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: 3-isopropylmalate dehydrogenase, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
- 1vlg.pdb.
metal binding protein 23-jul-04 1vlg
Fe
Title: crystal structure of ferritin (tm1128) from thermotoga maritima at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: ferritin, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vlh.pdb.
transferase 23-jul-04 1vlh
Title: crystal structure of phosphopantetheine adenylyltransferase (tm0741) from thermotoga maritima at 2.20 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: phosphopantetheine adenylyltransferase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vli.pdb.
biosynthetic protein 27-jul-04 1vli
Zn Se
Title: crystal structure of spore coat polysaccharide biosynthesis protein spse (bsu37870) from bacillus subtilis at 2.38 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: spore coat polysaccharide biosynthesis protein spse, structural genomics, jcsg, protein structure initiative, bsu37870, spse, psi, joint center for structural genomics
- 1vlj.pdb.
oxidoreductase 28-jul-04 1vlj
Fe
Title: crystal structure of nadh-dependent butanol dehydrogenase a (tm0820) from thermotoga maritima at 1.78 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: nadh-dependent butanol dehydrogenase a, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vll.pdb.
oxidoreductase 03-aug-04 1vll
Title: crystal structure of alanine dehydrogenase (af1665) from archaeoglobus fulgidus at 2.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: af1665, alanine dehydrogenase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vlm.pdb.
transferase 04-aug-04 1vlm
Na Se
Title: crystal structure of sam-dependent methyltransferase, possible histamine n-methyltransferase (tm1293) from thermotoga maritima at 2.20 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: sam-dependent methyltransferase, possible histamine n-methyltransferase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vlo.pdb.
transferase 05-aug-04 1vlo
Se
Title: crystal structure of aminomethyltransferase (t protein; tetrahydrofolate-dependent) of glycine cleavage system (np417381) from escherichia coli k12 at 1.70 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: aminomethyltransferase (t protein; tetrahydrofolate-dependent) of glycine cleavage system, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vlp.pdb.
transferase 06-aug-04 1vlp
Cl Se
Title: crystal structure of nicotinate phosphoribosyltransferase (yor209c) from saccharomyces cerevisiae at 1.75 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: nicotinate phosphoribosyltransferase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vlq.pdb.
hydrolase 09-aug-04 1vlq
Se
Title: crystal structure of acetyl xylan esterase (tm0077) from thermotoga maritima at 2.10 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: acetyl xylan esterase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vlr.pdb.
rna binding protein 10-aug-04 1vlr
Title: crystal structure of mrna decapping enzyme (dcps) from mus musculus at 1.83 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: mrna decapping enzyme (dcps), structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vlu.pdb.
oxidoreductase 16-aug-04 1vlu
Cl Se
Title: crystal structure of gamma-glutamyl phosphate reductase (yor323c) from saccharomyces cerevisiae at 2.40 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: gamma-glutamyl phosphate reductase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vlv.pdb.
transferase 16-aug-04 1vlv
Title: crystal structure of ornithine carbamoyltransferase (tm1097) from thermotoga maritima at 2.25 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: ornithine carbamoyltransferase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vlw.pdb.
lyase 18-aug-04 1vlw
Title: crystal structure of 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (tm0066) from thermotoga maritima at 2.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: 2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vly.pdb.
structural genomics, unknown function 20-aug-04 1vly
Cl Ca Se
Title: crystal structure of unknown protein from 2d-page (spot pr51) (b2898) from escherichia coli k12 at 1.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: b2898, unknown protein from 2d-page (spot pr51), structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vm6.pdb.
oxidoreductase 03-sep-04 1vm6
Title: crystal structure of dihydrodipicolinate reductase (tm1520) from thermotoga maritima at 2.27 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: dihydrodipicolinate reductase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vm7.pdb.
transferase 08-sep-04 1vm7
Title: crystal structure of ribokinase (tm0960) from thermotoga maritima at 2.15 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: ribokinase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vm8.pdb.
transferase 10-sep-04 1vm8
Cl Se
Title: crystal structure of udp-n-acetylglucosamine pyrophosphorylase (agx2) from mus musculus at 2.50 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: 16741099, udp-n-acetylglucosamine pyrophosphorylase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vma.pdb.
protein transport 15-sep-04 1vma
Mg
Title: crystal structure of cell division protein ftsy (tm0570) from thermotoga maritima at 1.60 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: cell division protein ftsy, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vmb.pdb.
translation 16-sep-04 1vmb
Title: crystal structure of 30s ribosomal protein s6 (tm0603) from thermotoga maritima at 1.70 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: 30s ribosomal protein s6, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vmd.pdb.
lyase 20-sep-04 1vmd
Cl
Title: crystal structure of methylglyoxal synthase (tm1185) from thermotoga maritima at 2.06 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: methylglyoxal synthase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vme.pdb.
electron transport 21-sep-04 1vme
Cl Fe Se
Title: crystal structure of flavoprotein (tm0755) from thermotoga maritima at 1.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: flavoprotein, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vmf.pdb.
structural genomics, unknown function 23-sep-04 1vmf
Na
Title: crystal structure of hypothetical protein (10176122) from bacillus halodurans at 1.46 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: hypothetical protein, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vmg.pdb.
hydrolase 24-sep-04 1vmg
Li Se
Title: crystal structure of mazg nucleotide pyrophosphohydrolase (13816655) from sulfolobus solfataricus at 1.46 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: mazg nucleotide pyrophosphohydrolase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vmh.pdb.
structural genomics, unknown function 24-sep-04 1vmh
Na
Title: crystal structure of uncharacterized conserved protein yjbq/upf0047 family, ortholog yugu b.subtilis (15023806) from clostridium acetobutylicum at 1.31 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: uncharacterized conserved protein yjbq/upf0047 family, ortholog yugu b.subtilis, structural genomics, protein structure initiative, psi, joint center for structural genomics, jcsg
- 1vmi.pdb.
transferase 28-sep-04 1vmi
Se
Title: crystal structure of putative phosphate acetyltransferase (np_416953.1) from escherichia coli k12 at 2.32 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative phosphate acetyltransferase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vmj.pdb.
structural genomics, unknown function 30-sep-04 1vmj
Na
Title: crystal structure of hypothetical protein (tm0723) from thermotoga maritima at 1.52 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: hypothetical protein, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vmk.pdb.
transferase 30-sep-04 1vmk
Mg
Title: crystal structure of purine nucleoside phosphorylase (tm1596) from thermotoga maritima at 2.01 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: purine nucleoside phosphorylase, structural genomics, jcsg, protein structure initiative, psi, joint center for structural genomics
- 1vpx.pdb.
transferase 23-nov-04 1vpx
Title: crystal structure of transaldolase (ec 2.2.1.2) (tm0295) from thermotoga maritima at 2.40 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: transaldolase (ec 2.2.1.2), structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi
- 1vqr.pdb.
structural genomics, unknown function 17-dec-04 1vqr
Se
Title: crystal structure of hypothetical protein (6967725) from campylobacter jejuni at 2.25 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: hypothetical protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi
- 1w9e.pdb.
adhesion/complex 09-oct-04 1w9e
Title: crystal structure of the pdz tandem of human syntenin in complex with tnefyf peptide
Author: j. grembecka, t. cierpicki, y. devedjiev, d. cooper, u. derewenda, z. s. derewenda
Keywords: pdz domain, scaffolding protein signaling protein
- 1w9o.pdb.
adhesion/complex 15-oct-04 1w9o
Title: crystal structure of the pdz tandem of human syntenin in complex with tneyyv peptide
Author: j. grembecka, t. cierpicki, y. devedjiev, d. cooper, u. derewenda, z. s. derewenda
Keywords: pdz domain, scaffolding protein
- 1w9q.pdb.
adhesion/complex 15-oct-04 1w9q
Title: crystal structure of the pdz tandem of human syntenin in complex with tnefaf peptide
Author: j. grembecka, t. cierpicki, y. devedjiev, d. cooper, z. s. derewenda
Keywords: pdz domain, scaffolding protein
- 1wa3.pdb.
aldolase 18-oct-04 1wa3
Title: mechanism of the class i kdpg aldolase
Author: s. w. b. fullerton, j. s. griffiths, a. b. merkel, n. j. wymer, m. j. hutchins, c. a. fierke, e. j. toone, j. h. naismith
Keywords: aldolase, pyruvate, lyase, thermotoga maritima
- 1wau.pdb.
lyase 27-oct-04 1wau
Title: structure of kdpg aldolase e45n mutant
Author: a. b. merkel, j. h. naismith
Keywords: escherichia coli, lyase, e45n mutant, multifunctional enzyme
- 1wbh.pdb.
lyase 18-oct-04 1wbh
Title: crystal structure of the e45n mutant from kdpg aldolase from escherichia coli
Author: s. w. b. fullerton, a. b. merkel, j. h. naismith
Keywords: aldolase, kdpg aldolase, escherichia coli
- 1wcb.pdb.
immune system 10-nov-04 1wcb
I
Title: plp-dependent catalytic antibody 15a9 in complex with its hapten
Author: b. golinelli-pimpaneau, p. christen
Keywords: transamination, pyridoxal-phosphate, hapten, phosphopyridoxyl-l-lysine, immune system
- 1wvu.pdb.
hydrolase 27-dec-04 1wvu
Cl
Title: crystal structure of chitinase c from streptomyces griseus hut6037
Author: y. kezuka, t. watanabe, t. nonaka
Keywords: whole structure
- 1wvv.pdb.
hydrolase 27-dec-04 1wvv
Cl
Title: crystal structure of chitinase c mutant e147q
Author: y. kezuka, t. watanabe, t. nonaka
Keywords: whole structure
- 1yax.pdb.
transferase, signaling protein 17-dec-04 1yax
Ca
Title: cystal structure analysis of s.typhimurium phoq sensor domain with calcium
Author: u. s. cho, w. xu
- 1yvb.pdb.
hydrolase/hydrolase inhibitor 15-feb-05 1yvb
Title: the plasmodium falciparum cysteine protease falcipain-2
Author: s. x. wang
- 1yzc.pdb.
electron transport 28-feb-05 1yzc
(NMR, 10 structures)
Title: the solution structure of a redesigned apocytochrome b562 (rd-apocyt b562) with the n- and a part of the c-terminal helices unfolded
Author: h. feng, z. zhou, y. bai, berkeley structural genomics center (bsgc)
Keywords: native-state hydrogen exchange, protein engineering, protein structure, nmr, structural genomics, psi, protein structure initiative, berkeley structural genomics center, bsgc
- 1z66.pdb.
virus/viral protein 21-mar-05 1z66
(NMR, 20 structures)
Title: nmr solution structure of domain iii of e-protein of tick- borne langat flavivirus (no rdc restraints)
Author: m. mukherjee, k. dutta, m. a. white, d. cowburn, r. o. fox
- 1z6e.pdb.
hydrolase 22-mar-05 1z6e
F
Title: crystal structure of factor xa complexed to razaxaban
Author: m. l. quan, p. y. s. lam, q. han, d. j. p. pinto, m. y. he, r. li, c. d. ellis, c. g. clark, c. a. teleha, j. -h. sun, r. s. alexander, s. bai, j. m. luettgen, r. m. knabb, p. c. wong, r. r. wexler
Keywords: factor xa
- 1z6h.pdb.
biosynthetic protein 22-mar-05 1z6h
(NMR, 20 structures)
Title: solution structure of bacillus subtilis blap biotinylated- form
Author: g. cui, b. xia
Keywords: single-domain biotin/lipoyl attachment protein, solution structure
- 1z7p.pdb.
electron transport 26-mar-05 1z7p
(NMR, 20 structures)
Title: solution structure of reduced glutaredoxin c1 from populus tremula x tremuloides
Author: y. feng, n. zhong, n. rouhier, j. jacquot, b. xia
- 1z7r.pdb.
electron transport 26-mar-05 1z7r
(NMR, minimized average structure)
Title: solution structure of reduced glutaredoxin c1 from populus tremula x tremuloides
Author: y. feng, n. zhong, n. rouhier, j. jacquot, b. xia
- 1z84.pdb.
structural genomics, unknown function 29-mar-05 1z84
Zn
Title: x-ray structure of galt-like protein from arabidopsis thaliana at5g18200
Author: j. g. mccoy, e. bitto, g. n. phillips jr. , c. a. bingman, center for eukaryotic structural genomics (cesg)
Keywords: zinc, amp, structural genomics, protein structure initiative, psi, cesg, center for eukaryotic structural genomics
- 1zat.pdb.
transferase 07-apr-05 1zat
Zn
Title: crystal structure of an enterococcus faecium peptidoglycan binding protein at 2.4 a resolution
Author: s. biarrotte-sorin, j. -e. hugonnet, j. -l. mainardi, l. gutmann, l. rice, m. arthur, c. mayer
Keywords: d-transpeptidation, peptidoglycan, beta-lactam insensitive transpeptidase, antibiotic resistance
- 1zdq.pdb.
oxidoreductase 14-apr-05 1zdq
Cu
Title: crystal structure of met150gly afnir with methylsulfanyl methane bound
Author: h. j. wijma, i. s. macpherson, m. alexandre, r. e. m. diederix, g. w. canters, m. e. p. murphy, m. p. verbeet
Keywords: nitrate assimiliation
- 1zds.pdb.
oxidoreductase 14-apr-05 1zds
Cu
Title: crystal structure of met150gly afnir with acetamide bound
Author: h. j. wijma, i. s. macpherson, m. alexandre, r. e. m. diederix, g. w. canters, m. e. p. murphy, m. p. verbeet
Keywords: nitrate assimiliation
- 1zem.pdb.
oxidoreductase 19-apr-05 1zem
Mg
Title: crystal structure of nad+-bound xylitol dehydrogenase
Author: a. h. ehrensberger, r. a. elling, d. k. wilson
Keywords: dinucleotide-binding domain
- 1zgg.pdb.
hydrolase 21-apr-05 1zgg
(NMR, 20 structures)
Title: solution structure of a low molecular weight protein tyrosine phosphatase from bacillus subtilis
Author: h. xu, b. xia, c. jin
Keywords: four-stranded parallel beta sheet, structural genomics
- 1zk6.pdb.
isomerase 02-may-05 1zk6
(NMR, 15 structures)
Title: nmr solution structure of b. subtilis prsa ppiase
Author: h. tossavainen, p. permi, s. l. purhonen, m. sarvas, i. kilpelainen, r. seppala
- 1zru.pdb.
virus/viral protein 22-may-05 1zru
Title: structure of the lactophage p2 receptor binding protein in complex with glycerol
Author: s. spinelli, d. m. tremblay, m. tegoni, s. blangy, c. huyghe, a. desmyter, s. labrie, h. de haard, s. moineau, c. cambillau, structural proteomics in europe (spine)
Keywords: beta prism, beta barrel, structural genomics, structural proteomics in europe, spine
- 1zrv.pdb.
antimicrobial protein, antibiotic 23-may-05 1zrv
(NMR, 10 structures)
Title: solution structure of spinigerin in h20/tfe 50%
Author: c. landon, h. meudal, n. boulanger, p. bulet, f. vovelle
- 1zrw.pdb.
antimicrobial protein, antibiotic 23-may-05 1zrw
(NMR, 30 structures)
Title: solution structure of spinigerin in h20/tfe 10%
Author: c. landon, h. meudal, n. boulanger, p. bulet, f. vovelle
- 1zrx.pdb.
antimicrobial protein, antibiotic 23-may-05 1zrx
(NMR, 10 structures)
Title: solution structure of stomoxyn in h20/tfe 50%
Author: c. landon, h. meudal, n. boulanger, p. bulet, f. vovelle
- 1zw8.pdb.
transcription 03-jun-05 1zw8
Zn
(NMR, 20 structures)
Title: solution structure of a zap1 zinc-responsive domain provides insights into metalloregulatory transcriptional repression in saccharomyces cerevisiae
Author: z. wang, l. s. feng, k. venkataraman, v. a. matskevich, p. parasuram, j. h. laity
- 1zwj.pdb.
structural genomics, unknown function 03-jun-05 1zwj
Zn
Title: x-ray structure of galt-like protein from arabidopsis thaliana at5g18200
Author: g. e. wesenberg, d. w. smith, g. n. phillips jr. , j. g. mccoy, k. a. johnson, e. bitto, c. a. bingman, s. t. m. allard, center for eukaryotic structural genomics (cesg)
Keywords: zinc, at5g18200, structural genomics, protein structure initiative, psi, cesg, center for eukaryotic structural genomics
- 2a7a.pdb.
metal binding protein 05-jul-05 2a7a
Mn Ca Xe
Title: on the routine use of soft x-rays in macromolecular crystallography, part iii- the optimal data collection wavelength
Author: c. mueller-dieckmann, s. panjikar, p. a. tucker, m. s. weiss
- 2a8p.pdb.
hydrolase 08-jul-05 2a8p
Mn
Title: 2.7 angstrom crystal structure of the complex between the nuclear snorna decapping nudix hydrolase x29 and manganese
Author: j. n. scarsdale, b. a. peculis, h. t. wright
- 2a8q.pdb.
translation,hydrolase 08-jul-05 2a8q
Mn
Title: 2.6 angstrom crystal structure of the complex between the nuclear snorna decapping nudix hydrolase x29 and manganese in the presence of 7-methyl-gdp
Author: j. n. scarsdale, b. a. peculis, h. t. wright
- 2a8r.pdb.
translation,hydrolase 08-jul-05 2a8r
Mn
Title: 2.45 angstrom crystal structure of the complex between the nuclear snorna decapping nudix hydrolase x29 and manganese in the presence of 7-methyl-gtp
Author: j. n. scarsdale, b. a. peculis, h. t. wright
- 2a8s.pdb.
translation,hydrolase 08-jul-05 2a8s
Mn
Title: 2.45 angstrom crystal structure of the complex between the nuclear snorna decapping nudix hydrolase x29, manganese and gtp
Author: j. n. scarsdale, b. a. peculis, h. t. wright
- 2a8t.pdb.
translation,hydrolase 08-jul-05 2a8t
Mn
Title: 2.1 angstrom crystal structure of the complex between the nuclear u8 snorna decapping nudix hydrolase x29, manganese and m7g-ppp-a
Author: j. n. scarsdale, b. a. peculis, h. t. wright
- 2a8y.pdb.
transferase 10-jul-05 2a8y
Title: crystal structure of 5'-deoxy-5'methylthioadenosine phosphorylase complexed with 5'-deoxy- 5'methylthioadenosine and sulfate
Author: y. zhang, m. porcelli, g. cacciapuoti, s. e. ealick
Keywords: beta sheet, beta barrel
- 2adw.pdb.
deoxyribonucleic acid 21-jul-05 2adw
Zn Ni
Title: crystal strucutre of echinomycin-(acgtacgt)2 solved by sad
Author: j. a. cuesta-seijo, g. m. sheldrick
Keywords: hoogsteen/watson-crick
- 2aff.pdb.
cell cycle 25-jul-05 2aff
(NMR, 100 structures)
Title: the solution structure of the ki67fha/hnifk(226-269)3p complex
Author: i. -j. l. byeon, h. li, h. song, a. m. gronenborn, m. d. tsai
- 2ahy.pdb.
transport protein 28-jul-05 2ahy
Na Ca
Title: na+ complex of the nak channel
Author: n. shi, s. ye, a. alam, l. chen, y. jiang
Keywords: helix bundle, tetramer, central cavity, ion binding
- 2ahz.pdb.
transport protein 28-jul-05 2ahz
K Ca
Title: k+ complex of the nak channel
Author: n. shi, s. ye, a. alam, l. chen, y. jiang
Keywords: helix bundle, tetramer, central cavity, ion binding
- 2aj3.pdb.
immune system 01-aug-05 2aj3
Title: crystal structure of a cross-reactive hiv-1 neutralizing cd4-binding site antibody fab m18
Author: p. prabakaran, j. gan, y. q. wu, m. y. zhang, d. s. dimitrov, x. ji
Keywords: antibody, fab, cd4-binding, immunoglobulin
- 2anw.pdb.
blood clotting, hydrolase 11-aug-05 2anw
Title: expression, crystallization and three-dimensional structure of the catalytic domain of human plasma kallikrein: implications for structure-based design of protease inhibitors
Author: j. tang, c. l. yu, s. r. williams, e. springman, d. jeffery, p. a. sprengeler, a. estevez, j. sampang, w. shrader, j. r. spencer, w. b. young, m. e. mcgrath, b. a. katz
- 2any.pdb.
blood clotting, hydrolase 11-aug-05 2any
Title: expression, crystallization and the three-dimensional structure of the catalytic domain of human plasma kallikrein: implications for structure-based design of protease inhibitors
Author: j. tang, c. l. yu, s. r. williams, e. springman, d. jeffery, p. a. sprengeler, a. estevez, j. sampang, w. shrader, j. r. spencer, w. b. young, m. e. mcgrath, b. a. katz
- 2ao5.pdb.
ribonucleic acid 12-aug-05 2ao5
Mg Br
Title: crystal structure of an rna duplex r(ggcgbrugcgcu)2 with terminal and internal tandem g-u base pairs
Author: r. utsunomiya, k. suto, d. balasundaresan, a. fukamizu, p. k. kumar, h. mizuno
Keywords: rna duplex
- 2arp.pdb.
hormone/growth factor 21-aug-05 2arp
Ni
Title: activin a in complex with fs12 fragment of follistatin
Author: a. e. harrington, s. a. morris-triggs, b. t. ruotolo, c. v. robinson, s. ohnuma, m. hyvonen
Keywords: disulfide rich, egf domain, kazal domain, protein complex
- 2arv.pdb.
hormone/growth factor 22-aug-05 2arv
Title: structure of human activin a
Author: a. e. harrington, s. a. morris-triggs, b. t. ruotolo, c. v. robinson, s. ohnuma, m. hyvonen
Keywords: cystine knot, disulfide linked
- 2as8.pdb.
hydrolase 23-aug-05 2as8
Mg
Title: crystal structure of mature and fully active der p 1 allergen
Author: s. de halleux, e. stura, l. vanderelst, v. carlier, m. jacquemin, j. - m. saint-remy
- 2au4.pdb.
ribonucleic acid 26-aug-05 2au4
(NMR, minimized average structure)
Title: class i gtp aptamer
Author: j. m. carothers, j. h. davis, j. j. chou, j. w. szostak
Keywords: aptamer
- 2auo.pdb.
oxygen storage/transport 28-aug-05 2auo
Fe
Title: residue f4 plays a key role in modulating the oxygen affinity and cooperatrivity in scapharca dimeric hemoglobin
Author: j. e. knapp, m. a. bonham, q. h. gibson, j. c. nichols, w. e. royer jr.
Keywords: allostery, oxygen affinity
- 2aup.pdb.
oxygen storage/transport 28-aug-05 2aup
Fe
Title: residue f4 plays a key role in modulating oxygen affinity and cooperativity in scapharca dimeric hemoglobin
Author: j. e. knapp, m. a. bonham, q. h. gibson, j. c. nichols, w. e. royer jr.
Keywords: oxygen binding, oxygen affinity, cooperative hemoglobin
- 2auq.pdb.
oxygen storage/transport 28-aug-05 2auq
Fe
Title: hbi (f97v) co bound
Author: j. e. knapp, m. a. bonham, q. h. gibson, j. c. nichols, w. e. royer jr.
Keywords: oxygen binding, hemoglobin
- 2aur.pdb.
oxygen storage/transport 28-aug-05 2aur
Fe
Title: f97v (no ligand bound)
Author: j. e. knapp, m. a. bonham, q. h. gibson, j. c. nichols, w. e. royer jr.
Keywords: oxygen binding, hemoglobin, oxygen transport
- 2av0.pdb.
oxygen storage/transport 29-aug-05 2av0
Fe
Title: f97l with co bound
Author: j. e. knapp, m. a. bonham, q. h. gibson, j. c. nichols, w. e. royer jr.
Keywords: oxygen binding, allosteric, hemoglobin
- 2av3.pdb.
oxygen storage/transport 29-aug-05 2av3
Fe
Title: f97l- no ligand
Author: j. e. knapp, m. a. bonham, q. h. gibson, j. c. nichols, w. e. royer jr.
Keywords: oxygen binding, oxygen transport, hemoglobin
- 2avh.pdb.
deoxyribonucleic acid 30-aug-05 2avh
K
Title: g4t3g4 dimeric quadruplex structure
Author: p. hazel, g. n. parkinson, s. neidle
Keywords: loop
- 2avj.pdb.
deoxyribonucleic acid 30-aug-05 2avj
K Br As
Title: g4(br)uttg4 dimeric quadruplex
Author: p. hazel, g. n. parkinson, s. neidle
Keywords: loop
- 2b17.pdb.
hydrolase 15-sep-05 2b17
Cl
Title: specific binding of non-steroidal anti-inflammatory drugs (nsaids) to phospholipase a2: crystal structure of the complex formed between phospholipase a2 and diclofenac at 2.7 a resolution:
Author: n. singh, t. jabeen, s. sharma, t. p. singh
Keywords: binding, complex, inhibiton
- 2b5x.pdb.
oxidoreductase 29-sep-05 2b5x
(NMR, 11 structures)
Title: solution structure of a thioredoxin-like protein in the reduced form
Author: x. zhang, b. xia, c. jin
- 2b5y.pdb.
oxidoreductase 29-sep-05 2b5y
(NMR, 11 structures)
Title: solution structure of a thioredoxin-like protein in the oxidized form
Author: x. zhang, b. xia, c. jin
- 2b8n.pdb.
transferase 07-oct-05 2b8n
Se
Title: crystal structure of glycerate kinase (ec 2.7.1.31) (tm1585) from thermotoga maritima at 2.70 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: glycerate kinase (ec 2.7.1.31), structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi
- 2b96.pdb.
hydrolase 11-oct-05 2b96
Cl Ca
Title: third calcium ion found in an inhibitor bound phospholipase a2
Author: k. sekar, d. velmurugan, t. yamane, m. d. tsai
Keywords: beta sheet, triple mutant, anisic acid
- 2b97.pdb.
surface active protein 11-oct-05 2b97
Mn
Title: ultra-high resolution structure of hydrophobin hfbii
Author: j. hakanpaa, m. linder, a. popov, a. schmidt, j. rouvinen
Keywords: ultra-high resolution, surfactant, amphiphilic
- 2ba2.pdb.
structural genomics, unknown function 13-oct-05 2ba2
Title: crystal structure of the duf16 domain of mpn010 from mycoplasma pneumoniae
Author: d. h. shin, j. -s. kim, h. yokota, r. kim, s. -h. kim, berkeley structural genomics center (bsgc)
Keywords: mpn010, hypothetical protein, coiled-coil, stutter, structural genomics, psi, protein structure initiative, berkeley structural genomics center, bsgc
- 2bbl.pdb.
virus/viral protein 17-oct-05 2bbl
(NMR, 10 structures)
Title: nmr structures of the peptide linked to the genome (vpg) of poliovirus in a stabilizing solvent
Author: c. h. schein, n. oezguen
Keywords: rna synthesis, uridylylation, viral replication, polymerase cofactor
- 2bbp.pdb.
virus/viral protein 17-oct-05 2bbp
(NMR, 10 structures)
Title: nmr structures of the peptide linked to the genome (vpg) of poliovirus
Author: c. h. schein, n. oezguen
Keywords: rna transcription primer, flexible structure, viral polymerase, picornavirus
- 2bny.pdb.
virus coat protein 04-apr-05 2bny
Title: ms2 (n87a mutant) - rna hairpin complex
Author: w. t. horn, k. tars, e. grahn, c. helgstrand, a. j. baron, h. lago, c. j. adams, d. s. peabody, s. e. v. phillips, n. j. stonehouse, l. liljas, p. g. stockley
Keywords: complex (capsid protein-rna hairpin), hairpin, levivirus, virus/viral protein/rna
- 2bpn.pdb.
electron transport 18-apr-05 2bpn
Fe
(NMR, 20 structures)
Title: solution structure of desulfovibrio vulgaris (hildenborough) ferricytochrome c3, nmr, 20 structures
Author: a. c. messias, a. p. aguiar, l. brennan, a. v. xavier, d. l. turner
Keywords: hemeprotein, cytochrome c3, redox cooperativity, redox-bohr cooperativity, transduction, paramagnetic
- 2bq5.pdb.
virus coat protein 26-apr-05 2bq5
Title: ms2 (n87ae89k mutant) - rna hairpin complex
Author: w. t. horn, k. tars, e. grahn, c. helgstrand, a. j. baron, h. lago, c. j. adams, d. s. peabody, s. e. v. phillips, n. j. stonehouse, l. liljas, p. g. stockley
Keywords: complex (capsid protein-rna hairpin), hairpin, levivirus, virus/viral protein/rna, virus coat protein
- 2bs0.pdb.
virus coat protein 27-apr-05 2bs0
Title: ms2 (n87ae89k mutant) - variant qbeta rna hairpin complex
Author: w. t. horn, k. tars, e. grahn, c. helgstrand, a. j. baron, h. lago, c. j. adams, d. s. peabody, s. e. v. phillips, n. j. stonehouse, l. liljas, p. g. stockley
Keywords: coplex (capsid protein-rna hairpin), hairpin, levivirus, virus/viral protein/rna, rna-binding, structural protein, virus coat protein
- 2bs1.pdb.
virus coat protein 27-apr-05 2bs1
Title: ms2 (n87ae89k mutant) - qbeta rna hairpin complex
Author: w. t. horn, k. tars, e. grahn, c. helgstrand, a. j. baron, h. lago, c. j. adams, d. s. peabody, s. e. v. phillips, n. j. stonehouse, l. liljas, p. g. stockley
Keywords: complex (capsid protein-rna hairpin), hairpin, levivirus, virus/viral protein/rna
- 2byo.pdb.
lipoprotein 03-aug-05 2byo
Zn
Title: crystal structure of mycobacterium tuberculosis lipoprotein lppx (rv2945c)
Author: g. sulzenbacher, s. canaan, v. roig-zamboni, d. maurin, b. gicquel, y. bourne
Keywords: lipid transport, mycobacterium tuberculosis, membrane, palmitate
- 2bz6.pdb.
hydrolase 11-aug-05 2bz6
F Ca
Title: orally available factor7a inhibitor
Author: k. groebke-zbinden, u. obst-sander, k. hilpert, h. kuehne, d. w. banner, h. j. boehm, m. stahl, j. ackermann, l. alig, l. weber, h. p. wessel, m. riederer, t. b. tschopp, t. lave
Keywords: coagulation,enzyme complex,hydrolase
- 2bzm.pdb.
immune system 18-aug-05 2bzm
(NMR, 26 structures)
Title: solution structure of the primary host recognition region of complement factor h
Author: a. p. herbert, d. uhrin, m. lyon, m. k. pangburn, p. n. barlow
Keywords: complement,hus,heparin,polyanions,immune response, innate immunity,complement alternate pathway,immune system
- 2c0a.pdb.
lyase 29-aug-05 2c0a
Title: mechanism of the class i kdpg aldolase
Author: m. j. hutchins, s. w. b. fullerton, e. j. toone, j. h. naismith
Keywords: lyase, multifunctional enzyme, schiff base
- 2c0r.pdb.
transferase 07-sep-05 2c0r
Title: crystal structure of phosphoserine aminotransferase from bacillus circulans var. alkalophilus at ph 8.5
Author: e. g. kapetaniou, a. c. papageorgiou
Keywords: pyridoxal-5'-phosphate, transferase, pyridine serine biosynthesis, amino-acid biosynthesis, aminotransferase, pyridoxal phosphate, pyridoxine biosynthesis, serine biosynthesis
- 2c6n.pdb.
hydrolase 10-nov-05 2c6n
Cl Zn
Title: structure of human somatic angiontensin-i converting enzyme n domain with lisinopril
Author: h. r. corradi, s. l. u. schwager, a. t. nichinda, e. d. sturrock, k. r. acharya
Keywords: n domain, zinc metallopeptidase, metalloprotease, angiotensin, lisinopril, alternative splicing, carboxypeptidase, glycoprotein, hydrolase, metal-binding, phosphorylation, protease, transmembrane
- 2c9t.pdb.
receptor/toxin complex 14-dec-05 2c9t
Title: crystal structure of acetylcholine binding protein (achbp) from aplysia californica in complex with alpha-conotoxin imi
Author: c. ulens, r. hogg, p. h. celie, d. bertrand, v. tsetlin, a. b. smit, t. k. sixma
Keywords: nicotinic acetylcholine receptor/toxin complex, conformational flexibility, conotoxin, acetylcholine receptor inhibitor, amidation, neurotoxin, postsynaptic neurotoxin, toxin
- 2cbm.pdb.
antimicrobial 05-jan-06 2cbm
Title: crystal structure of the apo-form of a neocarzinostatin mutant evolved to bind testosterone.
Author: a. drevelle, m. graille, b. heyd, i. sorel, n. ulryck, f. pecorari, m. desmadril, h. van tilbeurgh, p. minard
Keywords: antimicrobial, dna-binding, phage-display
- 2cbo.pdb.
antibiotic 06-jan-06 2cbo
Title: crystal structure of the neocarzinostatin 3tes24 mutant bound to testosterone hemisuccinate.
Author: a. drevelle, m. graille, b. heyd, i. sorel, n. ulryck, f. pecorari, m. desmadril, h. van tilbeurgh, p. minard
Keywords: hapten binding, neocarzinostatin, antibiotic, antimicrobial, dna-binding
- 2cbq.pdb.
antimicrobial 06-jan-06 2cbq
Title: crystal structure of the neocarzinostatin 1tes15 mutant bound to testosterone hemisuccinate.
Author: a. drevelle, m. graille, b. heyd, i. sorel, n. ulryck, f. pecorari, m. desmadril, h. van tilbeurgh, p. minard
Keywords: antimicrobial, dna-binding, phage-display hapten binding
- 2cbt.pdb.
antibiotic 06-jan-06 2cbt
Title: crystal structure of the neocarzinostatin 4tes1 mutant bound testosterone hemisuccinate.
Author: a. drevelle, m. graille, b. heyd, i. sorel, n. ulryck, f. pecorari, m. desmadril, h. van tilbeurgh, p. minard
Keywords: hapten binding, neocarzinostatin, antibiotic, antimicrobial, dna-binding
- 2cc6.pdb.
flavoprotein 12-jan-06 2cc6
Cl Mg Na
Title: complexes of dodecin with flavin and flavin-like ligands
Author: m. grininger, k. zeth, d. oesterhelt
Keywords: flavin, flavin-like ligands
- 2cc7.pdb.
flavoprotein 13-jan-06 2cc7
Cl Mg Na
Title: complexes of dodecin with flavin and flavin-like ligands
Author: m. grininger, k. zeth, d. oesterhelt
- 2cc8.pdb.
flavoprotein 13-jan-06 2cc8
Cl Mg Na
Title: complexes of dodecin with flavin and flavin-like ligands
Author: m. grininger, k. zeth, d. oesterhelt
Keywords: flavin, flavin-like ligands
- 2cc9.pdb.
flavoprotein 16-jan-06 2cc9
Cl Mg Na
Title: complexes of dodecin with flavin and flavin-like ligands
Author: m. grininger, k. zeth, d. oesterhelt
Keywords: flavin, flavin-like ligands
- 2ccb.pdb.
flavoprotein 13-jan-06 2ccb
Cl Mg Na
Title: complexes of dodecin with flavin and flavin-like ligands
Author: m. grininger, k. zeth, d. oesterhelt
Keywords: flavin, flavin-like ligands
- 2ccc.pdb.
flavoprotein 13-jan-06 2ccc
Cl Mg Na
Title: complexes of dodecin with flavin and flavin-like ligands
Author: m. grininger, k. zeth, d. oesterhelt
- 2ccr.pdb.
hydrolase 18-jan-06 2ccr
Ca
Title: structure of beta-1,4-galactanase
Author: j. le nours, l. de maria, d. welner, c. t. jorgensen, l. l. h. christensen, s. larsen, l. lo leggio
Keywords: 4-galactanase, glycoside hydrolase family 53, gh-a, galactan, hydrolase
- 2ccs.pdb.
heat-shock protein/complex 18-jan-06 2ccs
Cl
Title: human hsp90 with 4-chloro-6-(4-piperazin-1-yl-1h-pyrazol-3- yl)-benzene-1,2-diol
Author: x. barril, m. c. beswick, a. collier, m. j. drysdale, b. w. dymock, a. fink, k. grant, r. howes, a. m. jordan, a. massey, a. surgenor, j. wayne, p. workman, l. wright
Keywords: atpase, pyrazole, chaperone, atp-binding, heat shock, chaperone, nucleotide-binding, phosphorylation
- 2cct.pdb.
heat-shock protein complex 18-jan-06 2cct
Cl
Title: human hsp90 with 5-(5-chloro-2,4-dihydroxy-phenyl)-4- piperazin-1-yl-2h-pyrazole-3-carboxylic acid ethylamide
Author: x. barril, m. c. beswick, a. collier, m. j. drysdale, b. w. dymock, a. fink, k. grant, r. howes, a. m. jordan, a. massey, a. surgenor, j. wayne, p. workman, l. wright
Keywords: atpase, pyrazole, chaperone, atp-binding, heat shock, chaperone, nucleotide-binding, phosphorylation
- 2ccu.pdb.
heat-shock protein/complex 18-jan-06 2ccu
Cl
Title: human hsp90 with 4-chloro-6-(4-(4-(4-methanesulphonyl- benzyl)-pierazin-1-yl)-1h-pyrazol-3-yl)-benzene-1,3-diol
Author: x. barril, m. c. beswick, a. collier, m. j. drysdale, b. w. dymock, a. fink, k. grant, r. howes, a. m. jordan, a. massey, a. surgenor, j. wayne, p. workman, l. wright
Keywords: atpase, pyrazole, chaperone, atp-binding, heat shock, chaperone, nucleotide-binding, phosphorylation
- 2cd9.pdb.
oxidoreductase 23-jan-06 2cd9
Zn
Title: sulfolobus solfataricus glucose dehydrogenase 1 - apo form
Author: c. c. milburn, h. j. lamble, a. theodossis, d. w. hough, m. j. danson, g. l. taylor
Keywords: medium chain dehydrogenase family, oxidoreductase
- 2cda.pdb.
oxidoreductase 23-jan-06 2cda
Zn
Title: sulfolobus solfataricus glucose dehydrogenase 1 in complex with nadp
Author: c. c. milburn, h. j. lamble, a. theodossis, d. w. hough, m. j. danson, g. l. taylor
Keywords: medium chain dehydrogenase family, oxidoreductase
- 2cdb.pdb.
oxidoreductase 23-jan-06 2cdb
Zn
Title: sulfolobus solfataricus glucose dehydrogenase 1 in complex with nadp and glucose
Author: c. c. milburn, h. j. lamble, a. theodossis, d. w. hough, m. j. danson, g. l. taylor
Keywords: reductase, oxidoreductase, mdr family
- 2cdc.pdb.
oxidoreductase 23-jan-06 2cdc
Zn
Title: sulfolobus solfataricus glucose dehydrogenase 1 in complex with nadp and xylose
Author: c. c. milburn, h. j. lamble, a. theodossis, d. w. hough, m. j. danson, g. l. taylor
Keywords: reductase, oxidoreductase, mdr family
- 2cde.pdb.
cell receptor 23-jan-06 2cde
Title: structure and binding kinetics of three different human cd1d-alpha-galactosylceramide specific t cell receptors - inkt-tcr
Author: s. d. gadola, m. koch, j. marles-wright, n. m. lissin, d. sheperd, g. matulis, k. harlos, p. m. villiger, d. i. stuart, b. k. jakobsen, v. cerundolo, e. y. jones
Keywords: tcr, natural killer t cell, cd1d, alpha- galactosylceramide, mhc class i
- 2cdf.pdb.
cell receptor 23-jan-06 2cdf
Title: structure and binding kinetics of three different human cd1d-alpha-galactosylceramide-specific t cell receptors (tcr 5e)
Author: s. d. gadola, m. koch, j. marles-wright, n. m. lissin, d. sheperd, g. matulis, k. harlos, p. m. villiger, d. i. stuart, b. k. jakobsen, v. cerundolo, e. y. jones
Keywords: alpha-galactosylceramide, non-canonical tcr, tcr, t cell receptor, mhc class i, natural killer t cell, tcr 5e
- 2cdg.pdb.
cell receptor 23-jan-06 2cdg
Title: structure and binding kinetics of three different human cd1d-alpha-galactosylceramide-specific t cell receptors (tcr 5b)
Author: s. d. gadola, m. koch, j. marles-wright, n. m. lissin, d. sheperd, g. matulis, k. harlos, p. m. villiger, d. i. stuart, b. k. jakobsen, v. cerundolo, e. y. jones
Keywords: alpha-galactosylceramide, non-canonical natural killer tcr, tcr, mhc class i, natural killer t cell, non- canonical, tcr 5b, cell receptor
- 2ce7.pdb.
cell division protein 03-feb-06 2ce7
Mg Zn
Title: edta treated
Author: c. bieniossek, u. baumann
Keywords: metalloprotease, ftsh, cell division protein
- 2cea.pdb.
cell division protein 03-feb-06 2cea
Mg Zn
Title: wildtype
Author: c. bieniossek, u. baumann
Keywords: metalloprotease, ftsh, cell division protein
- 2cf2.pdb.
transferase 14-feb-06 2cf2
Title: architecture of mammalian fatty acid synthase
Author: t. maier, s. jenni, n. ban
Keywords: fatty acid biosynthesis, multienzyme, transferase
- 2chl.pdb.
transferase 15-mar-06 2chl
F
Title: structure of casein kinase 1 gamma 3
Author: g. bunkoczi, e. salah, p. rellos, s. das, o. fedorov, p. savitsky, o. gileadi, m. sundstrom, a. edwards, c. arrowsmith, e. ugochukwu, j. weigelt, f. von delft, s. knapp
Keywords: atp-binding, wnt signaling pathway, alternative splicing, kinase, nucleotide-binding, phosphorylation, serine/threonine-protein kinase, transferase
- 2d7s.pdb.
transferase 29-nov-05 2d7s
Title: foot and mouth disease virus rna-dependent rna polymerase in complex with vpg protein
Author: c. ferrer-orta, a. arias, r. perez-luque, c. escarmis, e. domingo, n. verdaguer
Keywords: rna-dependent rna polymerase, 3d polymerase, vpg, protein-primer
- 2dbt.pdb.
hydrolase 16-dec-05 2dbt
Title: crystal structure of chitinase c from streptomyces griseus hut6037
Author: y. kezuka, t. watanabe, t. nonaka
- 2ddh.pdb.
oxidoreductase 29-jan-06 2ddh
Title: crystal structure of acyl-coa oxidase complexed with 3-oh- dodecanoate
Author: t. keiji, y. nakajima, i. miyahara, k. hirotsu
Keywords: alpha up-down bundle
- 2dfd.pdb.
oxidoreductase 28-feb-06 2dfd
Cl
Title: crystal structure of human malate dehydrogenase type 2
Author: e. ugochukwu, n. shafqat, a. rojkova, m. sundstrom, c. arrowsmith, j. weigelt, a. edwards, f. von delft, u. oppermann, structural genomics consortium (sgc)
Keywords: citric acid cycle, structural genomics, structural genomics consortium, sgc
- 2er7.pdb.
hydrolase (acid proteinase) 12-nov-90 2er7
Title: x-ray analyses of aspartic proteinases./iii$. three- dimensional structure of endothiapepsin complexed with a transition-state isostere inhibitor of renin at 1.6 angstroms resolution
Author: b. veerapandian, j. b. cooper, m. szelke, t. l. blundell
- 2ess.pdb.
hydrolase 26-oct-05 2ess
Cl Ca Se
Title: crystal structure of (bt2075) from bacteriodes thetaiotaomicron vpi-5482 at 1.90 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: , structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi
- 2et1.pdb.
oxidoreductase 27-oct-05 2et1
Mn
Title: oxalate oxidase in complex with substrate analogue glycolate
Author: r. -s. rose, o. opaleye, e. -j. woo, r. w. pickersgill
Keywords: cupin
- 2et7.pdb.
oxidoreductase 27-oct-05 2et7
Mn
Title: structural and spectroscopic insights into the mechanism of oxalate oxidase
Author: o. opaleye, r. -s. rose, m. m. whittaker, e. -j. woo, j. w. whittaker, r. w. pickersgill
Keywords: cupin
- 2ete.pdb.
oxidoreductase 27-oct-05 2ete
Mn
Title: recombinant oxalate oxidase in complex with glycolate
Author: o. opaleye, r. -s. rose, m. m. whittaker, e. -j. woo, j. w. whittaker, r. w. pickersgill
Keywords: cupin
- 2etl.pdb.
hydrolase, ligase 27-oct-05 2etl
Cl
Title: crystal structure of ubiquitin carboxy-terminal hydrolase l1 (uch-l1)
Author: c. das, q. q. hoang, c. a. kreinbring, s. j. luchansky, r. k. meray, s. s. ray, p. t. lansbury, d. ringe, g. a. petsko
- 2evc.pdb.
hydrolase 31-oct-05 2evc
F Mn Na
Title: crystal structure of e. coli. methionine amino peptidase in complex with 5-(2-(trifluoromethyl)phenyl)furan-2- carboxylic acid
Author: w. -j. huang
Keywords: complex
- 2evm.pdb.
hydrolase 31-oct-05 2evm
Cl Mn Na
Title: crystal structure of methionine aminopeptidase in complex with 5-(2,5-dichlorophenyl)furan-2-carboxylic acid
Author: w. -j. huang
Keywords: complex
- 2evo.pdb.
hydrolase 31-oct-05 2evo
Co
Title: crystal structure of methionine amino peptidase in complex with n-cyclopentyl-n-(thiazol-2-yl)oxalamide
Author: w. -j. huang
Keywords: complex
- 2evp.pdb.
oxygen storage/transport 31-oct-05 2evp
Fe
Title: the structures of thiolate- and carboxylate-ligated ferric h93g myoglobin: models for cytochrome p450 and for oxyanion-bound heme proteins
Author: j. qin, r. perera, l. l. lovelace, j. h. dawson, l. lebioda
Keywords: bme
- 2ez5.pdb.
signalling protein,ligase 10-nov-05 2ez5
(NMR, 30 structures)
Title: solution structure of the dnedd4 ww3* domain- comm lpsy peptide complex
Author: v. kanelis, m. c. bruce, n. r. skrynnikov, d. rotin, j. d. forman-kay
- 2f05.pdb.
transcription repressor 11-nov-05 2f05
(NMR, 30 structures)
Title: solution structure of free pah2 domain of msin3b
Author: h. van ingen, m. a. baltussen, j. aelen, g. w. vuister
- 2f0c.pdb.
virus/viral protein 13-nov-05 2f0c
Title: structure of the receptor binding protein (orf49, bbp) from lactophage tp901-1
Author: c. cambillau, s. spinelli
Keywords: beta prism, 3 helix parallel bundle
- 2f0r.pdb.
unknown function 13-nov-05 2f0r
Title: crystallographic structure of human tsg101 uev domain
Author: a. camara-artigas, i. luque, a palencia, j. c. martinez, p. l. mateo
- 2f17.pdb.
transferase 14-nov-05 2f17
Mg
Title: mouse thiamin pyrophosphokinase in a ternary complex with pyrithiamin pyrophosphate and amp at 2.5 angstrom
Author: j. -y. liu, d. e. timm, t. d. hurley
Keywords: alpha/beta/alpha sandwich, pyrophosphokinase, amp
- 2f1f.pdb.
transferase 14-nov-05 2f1f
Mg
Title: crystal structure of the regulatory subunit of acetohydroxyacid synthase isozyme iii from e. coli
Author: a. kaplun, m. vyazmensky, z. barak, d. m. chipman, b. shaanan
Keywords: act domain
- 2f2f.pdb.
toxin 16-nov-05 2f2f
Title: crystal structure of cytolethal distending toxin (cdt) from actinobacillus actinomycetemcomitans
Author: t. yamada, j. komoto, k. saiki, k. konishi, f. takusagawa
Keywords: cdt, actinobacillus actinomycetemcomitans, crystal structure, oligomerization, stability and toxic activity
- 2f3o.pdb.
unknown function 22-nov-05 2f3o
Title: crystal structure of a glycyl radical enzyme from archaeoglobus fulgidus
Author: l. lehtio, a. goldman
Keywords: glycerol dehydratase, pfl2, glycyl radical, hyperthermophilic
- 2f49.pdb.
transferase 22-nov-05 2f49
Mg
Title: crystal structure of fus3 in complex with a ste5 peptide
Author: a. remenyi
- 2f5z.pdb.
oxidoreductase/protein binding 28-nov-05 2f5z
Title: crystal structure of human dihydrolipoamide dehydrogenase (e3) complexed to the e3-binding domain of human e3- binding protein
Author: c. a. brautigam, j. l. chuang, r. m. wynn, d. r. tomchick, m. machius, d. t. chuang
- 2f60.pdb.
protein binding 28-nov-05 2f60
Title: crystal structure of the dihydrolipoamide dehydrogenase (e3)-binding domain of human e3-binding protein
Author: c. a. brautigam, j. l. chuang, r. m. wynn, d. r. tomchick, m. machius, d. t. chuang
Keywords: e3bd
- 2f6h.pdb.
structural protein 29-nov-05 2f6h
Title: myosin v cargo binding domain
Author: n. pashkova, y. jin, s. ramaswamy, l. s. weisman
- 2f6u.pdb.
transferase 29-nov-05 2f6u
Title: crystal structure of (s)-3-o-geranylgeranylglyceryl phosphate synthase complexed with citrate
Author: j. payandeh
- 2f6x.pdb.
transferase 29-nov-05 2f6x
Title: crystal structure of (s)-3-o-geranylgeranylglyceryl phosphate synthase complexed with sn-g1p and mpd
Author: j. m. payandeh
Keywords: 4- pentanediol; dimer
- 2f7t.pdb.
dna binding protein 01-dec-05 2f7t
Mg
Title: crystal structure of the catalytic domain of mos1 mariner transposase
Author: j. m. richardson, a. dawson, p. taylor, d. j. finnegan, m. d. walkinshaw
Keywords: ddd motif
- 2f8e.pdb.
transferase 02-dec-05 2f8e
Mg Mn
Title: foot and mouth disease virus rna-dependent rna polymerase in complex with uridylylated vpg protein
Author: c. ferrer-orta, a. arias, r. perez-luque, c. escarmis, e. domingo, n. verdaguer
Keywords: rna-dependent rna polymerase , vpg protein, protein primer
- 2f98.pdb.
biosynthetic protein 05-dec-05 2f98
Title: crystal structure of the polyketide cyclase aknh with bound substrate and product analogue: implications for catalytic mechanism and product stereoselectivity.
Author: p. kallio, a. sultana, j. neimi, p. mantsala, g. schneider
Keywords: polyketide cyclase, stereoselectivity, aklavinone, crystal structure
- 2f99.pdb.
biosynthetic protein 05-dec-05 2f99
Title: crystal structure of the polyketide cyclase aknh with bound substrate and product analogue: implications for catalytic mechanism and product stereoselectivity.
Author: p. kallio, a. sultana, j. neimi, p. mantsala, g. schneider
Keywords: polyketide cyclase,stereoselectivity, aklavinone, crystal structure
- 2f9q.pdb.
oxidoreductase 06-dec-05 2f9q
Fe
Title: crystal structure of human cytochrome p450 2d6
Author: p. rowland
- 2fa2.pdb.
transferase 06-dec-05 2fa2
Title: crystal structure of fus3 without a peptide from ste5
Author: r. p. bhattacharyya, a. remenyi, m. c. good, c. j. bashor, a. m. falick, w. a. lim
- 2fbb.pdb.
hydrolase 09-dec-05 2fbb
Na
Title: crystal structure analysis of hexagonal lysozyme
Author: c. brinkmann, m. s. weiss, e. weckert
- 2ff3.pdb.
structural protein/contractile protein 19-dec-05 2ff3
Ca
Title: crystal structure of gelsolin domain 1:n-wasp v2 motif hybrid in complex with actin
Author: b. xue, a. h. aguda, r. c. robinson
- 2ff6.pdb.
structural protein/contractile protein 19-dec-05 2ff6
Ca
Title: crystal structure of gelsolin domain 1:ciboulot domain 2 hybrid in complex with actin
Author: a. h. aguda, b. xue, r. c. robinson
- 2ffy.pdb.
hydrolase 20-dec-05 2ffy
B K
Title: ampc beta-lactamase n289a mutant in complex with a boronic acid deacylation transition state analog compound sm3
Author: y. chen, g. minasov, t. a. roth, f. prati, b. k. shoichet
- 2ffz.pdb.
hydrolase 20-dec-05 2ffz
Zn
Title: structural studies examining the substrate specificity profiles of pc-plcbc protein variants
Author: a. b. benfield, n. m. antikainen, s. f. martin
Keywords: substrate specificity
- 2fgn.pdb.
hydrolase 22-dec-05 2fgn
Zn
Title: structural studies examining the substrate specificity profiles of pc-plcbc protein variants
Author: a. p. benfield, s. f. martin
Keywords: substrate specificity
- 2fgq.pdb.
membrane protein 22-dec-05 2fgq
Ca
Title: high resolution x-ray structure of omp32 in complex with malate
Author: k. zeth, h. engelhardt
Keywords: malate,outer membrane protein
- 2fgr.pdb.
membrane protein 22-dec-05 2fgr
Ca
Title: high resolution xray structure of omp32
Author: k. zeth, u. zachariae, h. engelhardt
- 2fh9.pdb.
signaling protein,transferase 23-dec-05 2fh9
Title: structure and dimerization of the kinase domain from yeast snf1
Author: v. nayak
- 2fhz.pdb.
immune system, hydrolase 27-dec-05 2fhz
Title: molecular basis of inhibition of the ribonuclease activity in colicin e5 by its cognate immunity protein
Author: y. l. lin, r. h. huang
Keywords: inhibition of ribonuclease
- 2fja.pdb.
oxidoreductase 02-jan-06 2fja
Fe
Title: adenosine 5'-phosphosulfate reductase in complex with substrate
Author: a. schiffer, g. fritz, p. m. kroneck, u. ermler
Keywords: adenylyl-phosphosulfate reductase, sulfur cycle
- 2fjb.pdb.
oxidoreductase 02-jan-06 2fjb
Na Fe
Title: adenosine-5'-phosphosulfate reductase im complex with products
Author: a. schiffer, g. fritz, p. m. kroneck, u. ermler
Keywords: sulfur cycle
- 2fjd.pdb.
oxidoreductase 02-jan-06 2fjd
Fe
Title: adenosine-5-phosphosulfate reductase in complex with sulfite (covalent adduct)
Author: a. schiffer, g. fritz, p. m. kroneck, u. ermler
Keywords: sulfur cycle
- 2fje.pdb.
oxidoreductase 02-jan-06 2fje
Fe
Title: adenosine-5-phosphosulfate reductase oxidized state
Author: a. schiffer, g. fritz, p. m. kroneck, u. ermler
Keywords: sulfur cycle
- 2fkw.pdb.
membrane protein, photosynthesis 05-jan-06 2fkw
Mg
Title: structure of lh2 from rps. acidophila crystallized in lipidic mesophases
Author: m. z. papiz, v. cherezov, j. clogston, m. caffrey
Keywords: lipidic mesophase, crystallization, cubic phase, sponge phase, ldao, rhodopin glucoside carotenoid
- 2fl5.pdb.
immune system 05-jan-06 2fl5
Title: cofactor-containing antibodies: crystal structure of the original yellow antibody
Author: x. zhu, i. a. wilson
Keywords: riboflavin-binding, cofactor, multiple myeloma, igggar
- 2fly.pdb.
hormone/growth factor 06-jan-06 2fly
(NMR, 20 structures)
Title: proadrenomedullin n-terminal 20 peptide
Author: s. lucyk, h. taha, h. yamamoto, m. miskolzie, g. kotovych
- 2fm0.pdb.
hydrolase 06-jan-06 2fm0
Mg F Zn
Title: crystal structure of pde4d in complex with l-869298
Author: q. huai, y. sun, h. wang, d. macdonald, r. aspiotis, h. robinson, z. huang, h. ke
Keywords: inhibitor selectivity, camp signalling, crystal structure
- 2fm5.pdb.
hydrolase 07-jan-06 2fm5
Mg F Zn
Title: crystal structure of pde4d2 in complex with inhibitor l- 869299
Author: q. huai, y. sun, h. wang, d. macdonald, r. aspiotis, h. robinson, z. huang, h. ke
Keywords: crystal structure, inhibitor selectivity, l-869299, enantiomer binding, camp signal
- 2fmc.pdb.
surface active protein 09-jan-06 2fmc
(NMR, 20 structures)
Title: solution structure of the class i hydrophobin eas
Author: a. h. kwan
Keywords: flexible loop, disulphide bonds
- 2foj.pdb.
hydrolase 13-jan-06 2foj
Title: the crystal strucure of the n-terminal domain of hausp/usp7 complexed with p53 peptide 364-367
Author: v. saridakis, y. sheng, f. sarkari, s. duan, t. wu, c. h. arrowsmith, l. frappier
- 2foo.pdb.
hydrolase 13-jan-06 2foo
Title: the crystal strucure of the n-terminal domain of hausp/usp7 complexed with p53 peptide 359-362
Author: v. saridakis, y. sheng, f. sarkari, s. duan, t. wu, c. h. arrowsmith, l. frappier
- 2fop.pdb.
hydrolase 13-jan-06 2fop
Title: the crystal strucure of the n-terminal domain of hausp/usp7 complexed with mdm2 peptide 147-150
Author: v. saridakis, y. sheng, f. sarkari, s. duan, t. wu, c. h. arrowsmith, l. frappier
- 2fp1.pdb.
isomerase 15-jan-06 2fp1
Pb
Title: secreted chorismate mutase from mycobacterium tuberculosis
Author: m. okvist, r. dey, s. sasso, e. grahn, p. kast, u. krengel
- 2fp2.pdb.
isomerase 15-jan-06 2fp2
Title: secreted chorismate mutase from mycobacterium tuberculosis
Author: m. okvist, r. dey, s. sasso, e. grahn, p. kast, u. krengel
- 2ft3.pdb.
structural protein, signaling protein 23-jan-06 2ft3
Title: crystal structure of the biglycan dimer core protein
Author: p. g. scott, c. m. dodd, e. m. bergmann
Keywords: dimer interface
- 2fuh.pdb.
ligase 26-jan-06 2fuh
(NMR, 10 structures)
Title: solution structure of the ubch5c/ub non-covalent complex
Author: p. s. brzovic, a. lissounov, d. w. hoyt, r. e. klevit
- 2fv6.pdb.
transcription 30-jan-06 2fv6
Zn
(NMR, 10 structures)
Title: solution structure of the mynd domain
Author: r. spadaccini, h. perrin, m. j. bottomley, s. ansieau, m. sattler
- 2fvi.pdb.
transferase 30-jan-06 2fvi
Mg
Title: crystal structure of human geranylgeranyl pyrophosphate synthase bound to ggpp
Author: k. l. kavanagh, j. e. dunford, g. bunkoczi, c. smee, f. vondelft, c. arrowsmith, j. weigelt, a. edwards, m. sundstrom, u. oppermann, structural genomics consortium (sgc)
Keywords: isopentenyl transferase, structural genomics, structural genomics consortium, sgc
- 2fwl.pdb.
electron transport/oxidoreductase 02-feb-06 2fwl
Cu Fe
(NMR, 3 structures)
Title: the cytochrome c552/cua complex from thermus thermophilus
Author: l. muresanu, p. pristovsek, f. loehr, o. maneg, m. d. mukrasch, h. rueterjans, b. ludwig, c. luecke
Keywords: redox protein complex, electron transfer pathway
- 2fx3.pdb.
translation 03-feb-06 2fx3
Mg
Title: crystal structure determination of e. coli elongation factor, tu using a twinned data set
Author: s. e. heffron, r. moeller, f. jurnak
Keywords: merohedral twinning
- 2fzp.pdb.
ligase 10-feb-06 2fzp
Title: crystal structure of the usp8 interaction domain of human nrdp1
Author: j. r. walker, g. v. avvakumov, s. xue, e. m. newman, c. butler-cole, p. j. finerty jr. , j. weigelt, m. sundstrom, c. arrowsmith, a. edwards, a. bochkarev, s. dhe-paganon
Keywords: protein ubiquitination
- 2g0k.pdb.
antibiotic 13-feb-06 2g0k
(NMR, 47 structures)
Title: solution structure of neocarzinostatin apo-protein
Author: f. w. muskett, r. g. stoneman, s. caddick, d. n. woolfson
Keywords: igg fold
- 2g0l.pdb.
antibiotic 13-feb-06 2g0l
(NMR, 58 structures)
Title: solution structure of neocarzinostatin apo-protein with bound flavone
Author: f. w. muskett, r. g. stoneman, s. caddick, d. n. woolfson
Keywords: igg fold
- 2g15.pdb.
transferase 13-feb-06 2g15
Title: structural characterization of autoinhibited c-met kinase
Author: w. wang, a. marimuthu, j. tsai, a. kumar, h. i. krupka, c. zhang, b. powell, y. suzuki, h. nguyen, m. tabrizizad, c. luu, b. l. west
- 2g1u.pdb.
structural genomics, unknown function 14-feb-06 2g1u
Na
Title: crystal structure of (tm1088a) from thermotoga maritima at 1.50 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: , structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi
- 2g2c.pdb.
structural genomics, unknown function 15-feb-06 2g2c
Na Se
Title: putative molybdenum cofactor biosynthesis protein from corynebacterium diphtheriae.
Author: j. osipiuk, h. li, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: putative molybdenum cofactor biosynthesis protein, psi, protein structure initiative, midwest center for structural genomics, mcsg
- 2g2d.pdb.
transferase 15-feb-06 2g2d
Title: crystal structure of a putative pduo-type atp:cobalamin adenosyltransferase from mycobacterium tuberculosis
Author: j. h. moon, a. kaviratne, m. yu, e. h. bursey, l. -w. hung, t. p. lekin, b. w. segelke, t. c. terwilliger, c. -y. kim, tb structural genomics consortium (tbsgc)
Keywords: trimer, structural genomics, psi, protein structure initiative, tb structural genomics consortium, tbsgc
- 2g36.pdb.
ligase 17-feb-06 2g36
Fe
Title: crystal structure of tryptophanyl-trna synthetase (ec 6.1.1.2) (tryptophan-trna ligase)(trprs) (tm0492) from thermotoga maritima at 2.50 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: tryptophanyl-trna synthetase (ec 6.1.1.2) (tryptophan-trna ligase)(trprs), structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi
- 2g57.pdb.
oncoprotein 22-feb-06 2g57
(NMR, 10 structures)
Title: structure of the phosphorylation motif of the oncogenic protein beta-catenin recognized by a selective monoclonal antibody
Author: s. megy, g. bertho, j. gharbi-benarous, f. baleux, r. benarous, j. p. girault
Keywords: p-beta-catenin phosphorylated peptide, epitope mapping, antibody, p-beta- catenin/antibody complex, std-nmr, trnoesy, restrained molecular dynamics, bound structure, binding fragment
- 2g58.pdb.
hydrolase 22-feb-06 2g58
Title: crystal structure of a complex of phospholipase a2 with a designed peptide inhibitor dehydro-ile-ala-arg-ser at 0.98 a resolution
Author: r. prem kumar, n. singh, r. k. somvanshi, a. s. ethayathulla, s. dey, s. sharma, p. kaur, m. perbandt, c. betzel, t. p. singh
Keywords: complex, diars, crystal structure, 0.98 a resolution, atomic resolution
- 2g6x.pdb.
luminescent protein 26-feb-06 2g6x
Title: crystal structure of a novel green fluorescent protein from marine copepod pontellina plumata
Author: a. g. evdokimov, m. e. pokross, d. m. chudakov
Keywords: natural chromophore, rapid maturation, beta can
- 2g6y.pdb.
luminescent protein 26-feb-06 2g6y
Title: crystal structure of the novel green fluorescent protein from marine copepod pontellina plumata
Author: a. g. evdokimov, m. e. pokross, d. m. chudakov
Keywords: natural chromophore, rapid maturation, beta-can
- 2g7g.pdb.
transcription 28-feb-06 2g7g
Se
Title: the crystal structure of the putative transcriptional regulator rha04620 from rhodococcus sp. rha1
Author: y. kim, a. joachimiak, e. evdokimova, o. kaggan, a. savchenko, a. edwards, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg
- 2g80.pdb.
hydrolase 01-mar-06 2g80
Mg
Title: crystal structure of utr4 protein (unknown transcript 4 protein) (yel038w) from saccharomyces cerevisiae at 2.28 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: utr4 protein (unknown transcript 4 protein), structural genomics, psi, protein structure initiative, joint center for structural genomics, jcsg
- 2ga1.pdb.
structural genomics, unknown function 07-mar-06 2ga1
Se
Title: crystal structure of (pc04255a) from anabaena variabilis atcc 29413 at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: structural genomics, psi, protein structure initiative, joint center for structural genomics, jcsg
- 2gb5.pdb.
hydrolase 09-mar-06 2gb5
Zn Se
Title: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from escherichia coli k12 at 2.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: nadh pyrophosphatase (ec 3.6.1.22), structural genomics, psi, protein structure initiative, joint center for structural genomics, jcsg
- 2gbd.pdb.
hormone/gorwth factor receptor 10-mar-06 2gbd
Title: human nr4a1 ligand-binding domain
Author: j. r. min, a. schuetz, p. loppnau, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. bochkarev, a. n. plotnikov, structural genomics consortium (sgc)
Keywords: structural genomics, structural genomics consortium, sgc
- 2gd9.pdb.
structural genomics, unknown function 15-mar-06 2gd9
Cl Se
Title: crystal structure of (2636623) from bacillus subtilis at 2.30 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi
- 2gdb.pdb.
transferase 15-mar-06 2gdb
Title: x-ray structure of at1g77540-coenzyme a complex
Author: e. bitto, g. e. wesenberg, g. n. phillips jr. , c. a. bingman, center for eukaryotic structural genomics (cesg)
Keywords: coenzyme-a, cog2388 family, acetyltransferase, at1g77540, structural genomics functional follow-up study, psi, protein structure initiative, center for eukaryotic structural genomics, cesg
- 2gds.pdb.
oxidoreductase 16-mar-06 2gds
Mn
Title: interrupting the hydrogen bonding network at the active site of human manganese superoxide dismutase
Author: j. j. perry
Keywords: h30n mutation
- 2hoa.pdb.
dna-binding protein 04-apr-92 2hoa
(NMR)
Title: structure determination of the antp(c39->s) homeodomain from nuclear magnetic resonance data in solution using a novel strategy for the structure calculation with the
Author: p. guntert, y. -q. qian, g. otting, m. muller, w. j. gehring, k. wuthrich
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Computational Center for Macromolecular Structure home page:
www.sdsc.edu/CCMS