Recent PDB releases or updates: week of 7 February 2003
- 1e32.pdb.
atpase 05-jun-00 1e32
Title: structure of the n-terminal domain and the d1 aaa domain of membrane fusion atpase p97
Author: x. zhang, a. shaw, p. a. bates, m. a. gorman, h. kondo, p. dokurno, g. leonar m. j. e. sternberg, p. s. freemont
Keywords: membrane fusion
- 1e3o.pdb.
transcription factor 24-may-00 1e3o
Title: crystal structure of oct-1 pou dimer bound to more
Author: a. remenyi, a. tomilin, e. pohl, h. schoeler, m. wilmanns
Keywords: pou domain, dimer, dna binding
- 1g0t.pdb.
isomerase 09-oct-00 1g0t
Title: dsbc mutant c101s
Author: p. w. haebel, p. metcalf
Keywords: protein disulfide bond isomerase, thioredoxin fold
- 1g25.pdb.
metal binding protein 17-oct-00 1g25
Zn
(NMR, 20 structures)
Title: solution structure of the n-terminal domain of the human tfiih mat1 subunit
Author: v. gervais, e. wasielewski, d. busso, a. poterszman, j. m. egly, j. c. thierry, b. kieffer
- 1gt0.pdb.
transcription factor 09-jan-02 1gt0
Title: crystal structure of a pou/hmg/dna ternary complex
Author: a. remenyi, m. wilmanns
Keywords: sox proteins, transcription
- 1gvn.pdb.
postsegregational killing system 19-feb-02 1gvn
Title: crystal structure of the plasmid maintenance system epsilon/zeta: meachnism of toxin inactivation and toxin function
Author: a. meinhart, j. c. alonso, n. straeter, w. saenger
Keywords: plasmid
- 1gwi.pdb.
oxidoreductase 15-mar-02 1gwi
Fe
Title: the 1.92 a structure of streptomyces coelicolor a3(2) cyp154c1: a new monooxygenase that functionalizes macrolide ring systems
Author: l. m. podust, y. kim, m. arase, b. a. neely, b. j. beck, h. bach, d. h. sherman, d. c. lamb, s. l. kelly, m. r. waterman
Keywords: cyp154c1, macrolide antibiotics, 12- and 14-carbon macrolactone monooxygenase,heme,oxidoreductase.
- 1h0l.pdb.
prion protein 24-jun-02 1h0l
(NMR 20 structures)
Title: human prion protein 121-230 m166c/e221c
Author: r. zahn, p. guntert, k. wuthrich
Keywords: prion, brain, glycoprotein, gpi-anchor, repeat, polymorphism, disease mutation, major prion protein
- 1h1y.pdb.
isomerase 25-jul-02 1h1y
Title: the structure of the cytosolic d-ribulose-5-phosphate 3-epimerase from rice complexed with sulfate
Author: s. jelakovic, g. e. schulz
Keywords: oxidative pentose phosphate pathway, isomerase
- 1h1z.pdb.
isomerase 25-jul-02 1h1z
Zn
Title: the structure of the cytosolic d-ribulose-5-phosphate 3-epimerase from rice complexed with sulfate and zinc
Author: s. jelakovic, g. e. schulz
Keywords: oxidative pentose phosphate pathway, isomerase
- 1h24.pdb.
transferase 31-jul-02 1h24
Title: cdk2/cyclin a in complex with a 9 residue recruitment peptide from e2f
Author: i. tews, k. y. cheng, e. d. lowe, m. e. m. noble, n. r. brown, s. gul, s. gamblin, l. n. johnson
Keywords: protein kinase, cyclin, cdk2, recruitment, peptide specificity, serine/threonine-protein kinase, atp-binding, cell division, mitosis, phosphorylation
- 1h25.pdb.
transferase 31-jul-02 1h25
Title: cdk2/cyclin a in complex with an 11-residue recruitment peptide from retinoblastoma-associated protein
Author: i. tews, k. y. cheng, e. d. lowe, m. e. m. noble, n. r. brown, s. gul, s. gamblin, l. n. johnson
Keywords: protein kinase, cyclin, cdk2, recruitment, peptide specificity
- 1h26.pdb.
cell cycle 31-jul-02 1h26
Title: cdk2/cyclin a in complex with an 11-residue recruitment peptide from p53
Author: i. tews, k. y. cheng, e. d. lowe, m. e. m. noble, n. r. brown, s. gul, s. gamblin, l. n. johnson
Keywords: protein kinase, cyclin, cdk2, recruitment, peptide specificity
- 1h27.pdb.
cell cycle 31-jul-02 1h27
Title: cdk2/cyclin a in complex with an 11-residue recruitment peptide from p27
Author: i. tews, k. y. cheng, e. d. lowe, m. e. m. noble, n. r. brown, s. gul, s. gamblin, l. n. johnson
Keywords: protein kinase, cyclin, cdk2, recruitment, peptide specificity, serine/threonine-protein kinase, atp-binding, cell division, mitosis, phosphorylation
- 1h28.pdb.
cell cycle 31-jul-02 1h28
Title: cdk2/cyclin a in complex with an 11-residue recruitment peptide from p107
Author: i. tews, k. y. cheng, e. d. lowe, m. e. m. noble, n. r. brown, s. gul, s. gamblin, l. n. johnson
Keywords: protein kinase, cyclin, cdk2, recruitment, peptide specificity, serine/threonine-protein kinase, atp-binding, cell division, mitosis, phosphorylation
- 1h2k.pdb.
transcription activator/inhibitor 12-aug-02 1h2k
Fe
Title: factor inhibiting hif-1 alpha in complex with hif-1 alpha fragment peptide
Author: j. m. elkins, k. s. hewitson, l. a. mcneill, i. schlemminger, j. f. seibel, c. j. schofield
Keywords: hif, dsbh, oxygenase, transcription, hypoxia, 2-oxoglutarate, asparaginyl hydroxylase, phosphorylation
- 1h2l.pdb.
transcription activator/inhibitor 12-aug-02 1h2l
Fe
Title: factor inhibiting hif-1 alpha in complex with hif-1 alpha fragment peptide
Author: j. m. elkins, k. s. hewitson, l. a. mcneill, i. schlemminger, j. f. seibel, c. j. schofield
Keywords: hif, dsbh, oxygenase, transcription, hypoxia, 2-oxoglutarate, asparaginyl hydroxylase, hydroxylase
- 1h2m.pdb.
transcription activator/inhibitor 12-aug-02 1h2m
Zn
Title: factor inhibiting hif-1 alpha in complex with hif-1 alpha fragment peptide
Author: j. m. elkins, k. s. hewitson, l. a. mcneill, i. schlemminger, j. f. seibel, c. j. schofield
Keywords: hif, dsbh, oxygenase, transcription, hypoxia, 2-oxoglutarate, asparaginyl hydroxylase, hydroxylase
- 1h2n.pdb.
transcription activator/inhibitor 12-aug-02 1h2n
Fe
Title: factor inhibiting hif-1 alpha
Author: j. m. elkins, k. s. hewitson, l. a. mcneill, i. schlemminger, j. f. seibel, c. j. schofield
Keywords: hif, dsbh, oxygenase, transcription, hypoxia, 2-oxoglutarate, asparaginyl hydroxylase, hydroxylase
- 1h30.pdb.
laminin g-domain protein 21-aug-02 1h30
Ca
Title: c-terminal lg domain pair of human gas6
Author: t. sasaki, p. g. knyazev, y. cheburkin, w. gohring, d. tisi, a. ullrich, r. timpl, e. hohenester
Keywords: axl/sky/mer ligand, laminin g-like domain, egf-like domain, calcium-binding
- 1iqx.pdb.
oxidoreductase 27-aug-01 1iqx
Co
Title: crystal structure of cobalt-substituted amine oxidase from arthrobacter globiformis
Author: s. kishishita, t. okajima, m. mure, m. kim, h. yamaguchi, s. hirota, s. suzuki, s. kuroda, k. tanizawa
Keywords: copper, amine oxidase, arthrobacter globiformis, quinone cofactor, tpq, cobalt, co(ii)
- 1iqy.pdb.
oxidoreductase 28-aug-01 1iqy
Ni
Title: crystal structure of nickel-substituted amine oxidase from arthrobacter globiformis
Author: s. kishishita, t. okajima, m. mure, m. kim, h. yamaguchi, s. hirota, s. kuroda, k. tanizawa
Keywords: copper, amine oxidase, arthrobacter globiformis, quinone cofactor, tpq, nickel, ni(ii)
- 1itt.pdb.
structural protein 03-feb-02 1itt
Title: average crystal structure of (pro-pro-gly)9 at 1.0 angstroms resolution
Author: c. hongo, v. nagarajan, k. noguchi, s. kamitori, k. okuyama, y. tanaka, n. nishino
Keywords: triple helix, crystal structure, pro-pro-gly, single crystal
- 1iu7.pdb.
oxidoreductase 28-feb-02 1iu7
Cu
Title: holo form of copper-containing amine oxidase from arthrobacter globiformis
Author: s. kishishita, t. okajima, m. kim, h. yamaguchi, s. hirota, s. suzuki, s. kuroda, k. tanizawa, m. mure
Keywords: copper, amine oxidase, arthrobacter globiformis, quinone cofactor, tpq
- 1j06.pdb.
hydrolase 07-nov-02 1j06
Title: crystal structure of mouse acetylcholinesterase in the apo form
Author: y. bourne, p. taylor, z. radic, p. marchot
Keywords: serine esterase, acetylcholinesterase, homodimer, hydrolase fold, glycosylated protein
- 1j07.pdb.
hydrolase 07-nov-02 1j07
Cl
Title: crystal structure of the mouse acetylcholinesterase- decidium complex
Author: y. bourne, p. taylor, z. radic, p. marchot
Keywords: serine esterase, acetylcholinesterase, homodimer, hydrolase fold, glycosylated protein
- 1j2x.pdb.
transcription 15-jan-03 1j2x
Zn
Title: crystal structure of rap74 c-terminal domain complexed with fcp1 c-terminal peptide
Author: k. kamada, r. g. roeder, s. k. burley
Keywords: rap74, rap30, tfiif, rna polymerase ii, winged-helix domain, fcp1, ctd, phosphatase
- 1j32.pdb.
transferase 17-jan-03 1j32
Title: aspartate aminotransferase from phormidium lapideum
Author: h. kim, y. sawa, k. hamada
- 1j33.pdb.
transferase 17-jan-03 1j33
Title: crystal structure of cobt from thermus thermophilus hb8
Author: n. kunishima, y. asada, m. miyano
Keywords: cobalamin biosynthesis, vitamin b12
- 1j3a.pdb.
ribosome 21-jan-03 1j3a
Title: crystal structure of ribosomal protein l13 from pyrococcus horikoshii
Author: t. nakashima, m. tanaka, t. kazama, s. kawamura, m. kimura, m. yao, i. tanaka
Keywords: rrna binding, ribosomal assembly
- 1jk4.pdb.
neuropeptide 11-jul-01 1jk4
Cd
Title: des 1-6 bovine neurophysin ii complex with vasopressin
Author: j. p. rose, b. -c. wang
Keywords: hypothalamus
- 1k87.pdb.
oxidoreductase 23-oct-01 1k87
Ca
Title: crystal structure of e.coli puta (residues 1-669)
Author: y. -h. lee, j. j. tanner, s. nadaria, d. f. becker
Keywords: proline dehydrogenase, transcriptional repressor, shuttling, dimer
- 1kt0.pdb.
isomerase 14-jan-02 1kt0
Title: structure of the large fkbp-like protein, fkbp51, involved in steroid receptor complexes
Author: c. r. sinars, j. cheung-flynn, r. a. rimerman, j. g. scammell, d. f. smith, j. c. clardy
Keywords: tpr repeats
- 1kt1.pdb.
isomerase 14-jan-02 1kt1
Title: structure of the large fkbp-like protein, fkbp51, involved in steroid receptor complexes
Author: c. r. sinars, j. cheung-flynn, r. a. rimerman, j. g. scammell, d. f. smith, j. c. clardy
Keywords: tpr repeats
- 1ktm.pdb.
transferase 16-jan-02 1ktm
(NMR, 25 structures)
Title: solution structure of fat domain of focal adhesion kinase
Author: g. liu, c. guibao, j. zheng
Keywords: fak, focal adhension targeting domain, fat, nmr, helix bundle
- 1kw8.pdb.
oxidoreductase 29-jan-02 1kw8
Fe
Title: crystal structure of bphc-2,3-dihydroxybiphenyl-no complex
Author: n. sato, y. uragami, t. nishizaki, y. takahashi, g. sazaki, k. sugimoto, t. nonaka, e. masai, m. fukuda, t. senda
- 1kw9.pdb.
oxidoreductase 29-jan-02 1kw9
Fe
Title: crystal structure of 2,3-dihydroxybiphenyl dioxygenase (bphc) in complex with 2,3-dihydroxybiphenyl at 2.0a resolution
Author: n. sato, y. uragami, t. nishizaki, y. takahashi, g. sazaki, k. sugimoto, t. nonaka, e. masai, m. fukuda, t. senda
- 1kwb.pdb.
oxidoreductase 29-jan-02 1kwb
Title: crystal structure of the his145ala mutant of 2,3- dihydroxybipheny dioxygenase (bphc)
Author: n. sato, y. uragami, t. nishizaki, y. takahashi, g. sazaki, k. sugimoto, t. nonaka, e. masai, m. fukuda, t. senda
- 1kwc.pdb.
oxidoreductase 29-jan-02 1kwc
Title: the his145ala mutant of 2,3-dihydroxybiphenyl dioxygenase in complex with 2,3-dihydroxybiphenyl
Author: n. sato, y. uragami, t. nishizaki, y. takahashi, g. sazaki, k. sugimoto, t. nonaka, e. masai, m. fukuda, t. senda
- 1ky8.pdb.
oxidoreductase 04-feb-02 1ky8
Na
Title: crystal structure of the non-phosphorylating glyceraldehyde- 3-phosphate dehydrogenase
Author: e. pohl, n. brunner, m. wilmanns, r. hensel
Keywords: aldh
- 1l2h.pdb.
immune system 21-feb-02 1l2h
Title: crystal structure of interleukin 1-beta f42w/w120f mutant
Author: m. g. rudolph, m. s. kelker, t. r. schneider, t. o. yeates, v. oseroff, d. k. heidary, p. a. jennings, i. a. wilson
Keywords: beta-trefoil, f42w/w120f double mutant, protein folding, mad phasing, hemihedral twinning
- 1l6h.pdb.
lipid transport 11-mar-02 1l6h
(NMR, minimized average structure)
Title: solution structure of plant nsltp2 purified from rice (oryza sativa)
Author: d. samuel, p. -c. lyu
Keywords: plant ltp, lipid transfer
- 1l9o.pdb.
oxidoreductase 26-mar-02 1l9o
Cu
Title: crystal structure of nitrite soaked i257a variant of the copper-containing nitrite reductase from alcaligenes faecalis
Author: m. j. boulanger, m. e. p. murphy
- 1l9p.pdb.
oxidoreductase 26-mar-02 1l9p
Cu
Title: crystal structure of nitrite soaked i257g variant of the copper-containing nitrite reductase from alcaligenes faecalies s-6
Author: m. j. boulanger, m. e. p. murphy
- 1l9q.pdb.
oxidoreductase 26-mar-02 1l9q
Cu
Title: crystal structure of the i257l variant of the copper- containing nitrite reductase from alcaligenes faecalis s-6
Author: m. j. boulanger, m. e. p. murphy
- 1l9r.pdb.
oxidoreductase 26-mar-02 1l9r
Cu
Title: crystal structure of the i257m variant of the copper- containing nitrite reductase from alcaligenes faecalis s-6
Author: m. j. boulanger, m. e. p. murphy
- 1l9s.pdb.
oxidoreductase 26-mar-02 1l9s
Cu
Title: crystal structure of the i257t variant of the copper- containing nitrite reductase from alcaligenes faecalis s-6
Author: m. j. boulanger, m. e. p. murphy
- 1l9t.pdb.
oxidoreductase 26-mar-02 1l9t
Cu
Title: crystal structure of the i257v variant of the copper- containing nitrite reductase from alcaligenes faecalis s-6
Author: m. j. boulanger, m. e. p. murphy
- 1ls3.pdb.
transferase 16-may-02 1ls3
Title: crystal structure of the complex between rabbit cytosolic serine hydroxymethyltransferase and triglu-5-formyl- tetrahydrofolate
Author: t. f. fu, j. n. scarsdale, g. kazanina, v. schirch, h. t. wright
- 1m1g.pdb.
transcription 19-jun-02 1m1g
Title: crystal structure of aquifex aeolicus n-utilization substance g (nusg), space group p2(1)
Author: t. steiner, j. t. kaiser, s. marinkovic, r. huber, m. c. wahl
Keywords: antitermination, kow domain, rnp motif, immunoglobulin fold, nucleic acid interaction, protein-protein interaction
- 1m1h.pdb.
transcription 19-jun-02 1m1h
Title: crystal structure of aquifex aeolicus n-utilization substance g (nusg), space group i222
Author: t. steiner, j. t. kaiser, s. marinkovic, r. huber, m. c. wahl
Keywords: antitermination, rnp motif, immunoglobulin fold, nucleic acid interaction, protein- protein interaction
- 1m6x.pdb.
ligase, lyase/dna 17-jul-02 1m6x
Title: flpe-holliday junction complex
Author: a. b. conway, y. chen, p. a. rice
Keywords: protein-dna complex, holliday- junction, domain-swapping
- 1ma9.pdb.
transport protein/contractile protein 02-aug-02 1ma9
Mg
Title: crystal structure of the complex of human vitamin d binding protein and rabbit muscle actin
Author: c. verboven, i. bogaerts, e. waelkens, a. rabijns, h. van baelen, r. bouillon, c. de ranter
Keywords: complex formed in plasma, actin scavenger system
- 1mcv.pdb.
hydrolase 06-aug-02 1mcv
Ca
Title: crystal structure analysis of a hybrid squash inhibitor in complex with porcine pancreatic elastase
Author: j. ay, k. hilpert, n. krauss, j. schneider-mergener, w. hoehne
Keywords: hybrid squash inhibitor
- 1mgr.pdb.
hydrolase 16-aug-02 1mgr
Title: crystal structure of rnase sa3,cytotoxic microbial ribonuclease
Author: j. sevcik, l. urbanikova, p. a. leland, r. t. raines
Keywords: ub rolls
- 1mgw.pdb.
hydrolase 16-aug-02 1mgw
Li
Title: crystal structure of rnase sa3, cytotoxic microbial ribonuclease
Author: j. sevcik, l. urbanikova, p. a. leland, r. t. raines
Keywords: ub rolls
- 1mh3.pdb.
sugar binding, dna binding protein 19-aug-02 1mh3
Title: maltose binding-a1 homeodomain protein chimera, crystal form i
Author: a. ke, c. wolberger
Keywords: homeodomain, binding cooperativity, maltose binding protein, mbp
- 1mh4.pdb.
sugar binding, dna binding protein 19-aug-02 1mh4
Title: maltose binding-a1 homeodomain protein chimera, crystal form ii
Author: a. ke, c. wolberger
Keywords: homeodomain, binding cooperativity, maltose binding protein, mbp
- 1mi5.pdb.
immune system 21-aug-02 1mi5
Title: the crystal structure of lc13 tcr in complex with hlab8-ebv peptide complex
Author: l. kjer-nielsen, c. s. clements, a. w. purcell, a. g. brooks, j. c. whisstock, s. r. burrows, j. mccluskey, j. rossjohn
Keywords: major histocompatability complex (class i), hla b8, epstein barr virus, immunodominant tcr (lc13)
- 1mkh.pdb.
ligase 29-aug-02 1mkh
Title: c-terminal domain of methionyl-trna synthetase from pyrococcus abyssi
Author: t. crepin, e. schmitt, s. blanquet, y. mechulam
Keywords: dimerization domain
- 1mm6.pdb.
membrane protein 03-sep-02 1mm6
Title: crystal structure of the glur2 ligand binding core (s1s2j) in complex with quisqualate in a non zinc crystal form at 2.15 angstroms resolution
Author: r. jin, m. horning, m. l. mayer, e. gouaux
Keywords: glur2, ligand binding core, s1s2, full agonist, quisqualate, complex
- 1mm7.pdb.
membrane protein 03-sep-02 1mm7
Zn
Title: crystal structure of the glur2 ligand binding core (s1s2j) in complex with quisqualate in a zinc crystal form at 1.65 angstroms resolution
Author: r. jin, m. horning, m. l. mayer, e. gouaux
Keywords: glur2, ligand binding core, s1s2, full agonist, quisqualate, complex
- 1mn6.pdb.
transferase 05-sep-02 1mn6
Title: thioesterase domain from picromycin polyketide synthase, ph 7.6
Author: s. -c. tsai, h. lu, d. e. cane, c. khosla, r. m. stroud
Keywords: polyketide synthase, open substrate channel, alpha-beta hydrolase
- 1mna.pdb.
transferase 05-sep-02 1mna
Title: thioesterase domain of picromycin polyketide synthase (pics te), ph 8.0
Author: s. -c. tsai, h. lu, d. e. cane, c. khosla, r. m. stroud
Keywords: polyketide synthase, open substrate channel, alpha-beta hydrolase
- 1mnq.pdb.
transferase 05-sep-02 1mnq
Title: thioesterase domain of picromycin polyketide synthase (pics te), ph 8.4
Author: s. -c. tsai, h. lu, d. e. cane, c. khosla, r. m. stroud
Keywords: polyketide synthase, open substrate channel, alpha-beta hydrolase
- 1mo2.pdb.
transferase 05-sep-02 1mo2
Title: thioesterase domain from 6-deoxyerythronolide synthase (debs te), ph 8.5
Author: s. -c. tsai, h. lu, d. e. cane, c. khosla, r. m. stroud
Keywords: polyketide synthase, open substrate channel, te, pks, alpha beta hydrolase, 6-deoxyerythronolide, picromycin, pikromycin, erythromycin
- 1mzh.pdb.
structural genomics, aldolase 07-oct-02 1mzh
Title: qr15, an aldolase
Author: j. f. hunt, a. y. tan, p. m. smith
Keywords: structural genomics
- 1n09.pdb.
de novo protein 11-oct-02 1n09
(NMR, 20 structures)
Title: a minimal beta-hairpin peptide scaffold for beta-turn display
Author: s. j. russell, t. blandl, n. j. skelton, a. g. cochran
Keywords: beta turn, cyclic disulfide
- 1n0d.pdb.
de novo protein 11-oct-02 1n0d
(NMR, 20 structures)
Title: stability of cyclic beta-hairpins: asymmetric contibutions from side chains of hydrogen bonded cross-strand residue pair
Author: s. j. russell, t. blandl, n. j. skelton, a. g. cochran
Keywords: beta turn, cyclic disulfide
- 1n16.pdb.
transferase 16-oct-02 1n16
Mg
Title: the 2.1 structure of t. californica creatine kinase complexed with the transition-state analogue complex, adp- mg 2+ /no3-/creatine
Author: s. d. lahiri, p. f. wang, p. c. babbitt, m. j. mcleish, g. l. kenyon, k. n. allen
Keywords: transition-state analogue complex, guanidino kinases, phosphocreatine, arginine kinases
- 1n1f.pdb.
immune system 17-oct-02 1n1f
Title: crystal structure of human interleukin-19
Author: c. chang, e. magracheva, s. kozlov, s. fong, g. tobin, s. kotenko, a. wlodawer, a. zdanov
Keywords: interleukin, four helix bundle
- 1n40.pdb.
oxidoreductase 30-oct-02 1n40
Fe
Title: atomic structure of cyp121, a mycobacterial p450
Author: d. leys, c. g. mowat, k. j. mclean, a. richmond, s. k. chapman, m. d. walkinshaw, a. w. munro
Keywords: oxygen binding, p450 fold
- 1n41.pdb.
lipid binding protein 30-oct-02 1n41
Ca
Title: crystal structure of annexin v k27e mutant
Author: y. d. mo, b. campos, t. r. mealy, l. commodore, j. f. head, j. r. dedman, b. a. seaton
Keywords: phospholipid membrane binding protein
- 1n42.pdb.
lipid binding protein 30-oct-02 1n42
Ca
Title: crystal structure of annexin v r149e mutant
Author: y. d. mo, b. campos, t. r. mealy, l. commodore, j. f. head, j. r. dedman, b. a. seaton
Keywords: phospholipid, membrane binding protein
- 1n44.pdb.
lipid binding protein 30-oct-02 1n44
Ca
Title: crystal structure of annexin v r23e mutant
Author: y. d. mo, b. campos, t. r. mealy, l. commodore, j. f. head, j. r. dedman, b. a. seaton
Keywords: phospholipid membrane binding proteins
- 1n4e.pdb.
deoxyribonucleic acid 30-oct-02 1n4e
Title: crystal structure of a dna decamer containing a thymine- dimer
Author: h. park, k. zhang, y. ren, s. nadji, n. sinha, j. -s. taylor, c. kang
Keywords: thymine dimer, dna decamer
- 1n4g.pdb.
oxidoreductase 31-oct-02 1n4g
I Fe
Title: structure of cyp121, a mycobacterial p450, in complex with iodopyrazole
Author: d. leys, c. g. mowat, k. j. mclean, a. richmond, s. k. chapman, m. d. walkinshaw, a. w. munro
Keywords: iodopyrazole complex, heme binding
- 1n5m.pdb.
hydrolase 06-nov-02 1n5m
I
Title: crystal structure of the mouse acetylcholinesterase- gallamine complex
Author: y. bourne, p. taylor, z. radic, p. marchot
Keywords: serine esterase, acetylcholinesterase, homodimer, hydrolase fold, glycosylated protein
- 1n5r.pdb.
hydrolase 07-nov-02 1n5r
Title: crystal structure of the mouse acetylcholinesterase- propidium complex
Author: y. bourne, p. taylor, z. radic, p. marchot
Keywords: serine esterase, acetylcholinesterase, homodimer, hydrolase fold, glycosylated protein
- 1n6a.pdb.
transferase 09-nov-02 1n6a
Se
Title: structure of set7/9
Author: t. w. kwon, j. h. chang, e. kwak, c. w. lee, a. joachimiak, y. c. kim, j. lee, y. cho
- 1n6c.pdb.
transferase 09-nov-02 1n6c
Title: structure of set7/9
Author: t. w. kwon, j. h. chang, y. cho
- 1n7m.pdb.
immune system 15-nov-02 1n7m
Title: germline 7g12 with n-methylmesoporphyrin
Author: j. yin, s. e. andryski, a. e. beuscher iv, r. c. stevens, p. g. schultz
- 1n8k.pdb.
oxidoreductase 21-nov-02 1n8k
Zn
Title: horse liver alcohol dehydrogenase val292thr mutant complexed to nad+ and pyrazole
Author: j. k. rubach, b. v. plapp
Keywords: alcohol, nicotinamide coenzyme, mutant, pyrazole
- 1n92.pdb.
oxidoreductase 21-nov-02 1n92
I Zn
Title: horse liver alcohol dehydrogenase complexed with nad+ and 4- iodopyrazole
Author: j. k. rubach, b. v. plapp
Keywords: alcohol, nicotinamide coenzyme, 4- iodopyrazole
- 1n9c.pdb.
electron transport 23-nov-02 1n9c
Fe
(NMR, 30 structures)
Title: structure and dynamics of reduced bacillus pasteurii cytochrome c: oxidation state dependent properties and implications for electron transfer processes
Author: i. bartalesi, i. bertini, a. rosato
Keywords: respiration, electron transfer, redox
- 1na2.pdb.
ribonucleic acid 26-nov-02 1na2
(NMR, 18 structures)
Title: solution structure of the p2b hairpin from human telomerase rna
Author: c. a. theimer, l. d. finger, l. trantirek, j. feigon
Keywords: u-c base pair, pentaloop, hairpin, rna, nmr, telomerase, narrow minor groove, u tracts
- 1ng0.pdb.
virus/viral protein 16-dec-02 1ng0
Ca
Title: the three-dimensional structure of cocksfoot mottle virus at 2.7a resolution
Author: k. tars, a. zeltins, l. liljas
Keywords: virus assembly
- 1ngw.pdb.
immune system 18-dec-02 1ngw
Title: chimeric affinity matured fab 7g12 complexed with mesoporphyrin
Author: j. yin, s. e. andryski, a. e. beuscher iv, r. c. stevens, p. g. schultz
Keywords: immunoglobulin, antigen binding fragment
- 1ngy.pdb.
immune system 18-dec-02 1ngy
Title: chimeric mature fab 7g12-apo
Author: j. yin, s. a. andryski, a. b. beuscher, r. c. stevens, p. g. schultz
Keywords: immunoglobulin, antigen binding fragment (fab)
- 1ngz.pdb.
immune system 18-dec-02 1ngz
Title: chimeric germline fab 7g12-apo
Author: j. yin, s. a. andryski, a. b. beuscher, r. c. stevens, p. g. schultz
Keywords: immunoglobulin, antigen binding fragment (fab)
- 1ni0.pdb.
hydrolase 20-dec-02 1ni0
Title: structure of the y94f mutant of the restriction endonuclease pvuii
Author: p. a. tucker, m. kokkinidis, s. nicolaki, d. kotsifaki
Keywords: pvuii, point mutation
- 1nkp.pdb.
transcription/dna 03-jan-03 1nkp
Title: crystal structure of myc-max recognizing dna
Author: s. k. nair, s. k. burley
Keywords: dna, bhlhz, oncogene, heterodimer
- 1nlw.pdb.
transcription/dna 07-jan-03 1nlw
Title: crystal structure of mad-max recognizing dna
Author: s. k. nair, s. k. burley
Keywords: dna, bhlhz
- 1nmd.pdb.
structural protein 09-jan-03 1nmd
Ca
Title: crystal structure of d. discoideum actin-gelsolin segment 1 complex crystallized in presence of lithium atp
Author: s. m. vorobiev, s. welti, j. condeelis, s. c. almo
Keywords: gelsolin, cytoskeleton organization, actin- associated protein
- 1nmi.pdb.
electron transport 10-jan-03 1nmi
Fe
(NMR, minimized average structure)
Title: solution structure of the imidazole complex of iso-1 cytochrome c
Author: y. yao, y. tong, g. liu, j. wang, j. zheng, w. tang
- 1no0.pdb.
hydrolase 15-jan-03 1no0
Zn Ca
Title: thermolysin with an alpha-amino phosphinic inhibitor
Author: m. selkti, a. tomas, t. prange
Keywords: alpha-amino phosphinic compound, inhibition, neprylisin
- 1npv.pdb.
hydrolase 20-jan-03 1npv
Title: crystal structure of hiv-1 protease complexed with ldc271
Author: a. smith
Keywords: hydrolase
- 1npw.pdb.
hydrolase 20-jan-03 1npw
Title: crystal structure of hiv protease complexed with lgz479
Author: a. smith
Keywords: hydrolase
- 1nqi.pdb.
transferase activator/transferase 21-jan-03 1nqi
Ca
Title: crystal structure of lactose synthase, a 1:1 complex between beta1,4-galactosyltransferase and alpha- lactalbumin in the presence of glcnac
Author: b. ramakrishnan, p. k. qasba
Keywords: n-acetylglucosamine binding, crystal structure
- 1nqs.pdb.
deoxyribonucleic acid 22-jan-03 1nqs
Ca
Title: structural characterisation of the holliday junction formed by the sequence d(tcggtaccga) at 1.97 a
Author: c. j. cardin, b. c. gale, j. h. thorpe, s. c. m. texieira, y. gan, m. i. a. a. moraes, a. l. brogden
Keywords: calcium ion
- 1nrm.pdb.
antibiotic 25-jan-03 1nrm
(NMR, minimized average structure)
Title: gramicidin a in dodecyl phosphocholine micelles (nmr)
Author: l. e. townsley, j. f. hinton
Keywords: right-handed, beta-6.3 helix, linear gramicidin, peptide antibiotic, membrane ion channel, dpc micelles
- 1nru.pdb.
antibiotic 25-jan-03 1nru
(NMR, minimized average structure)
Title: gramicidin a in dodecyl phosphocholine micelles in the presence of excess na+ (nmr)
Author: l. e. townsley, j. f. hinton
Keywords: right-handed, beta-6.3 helix, linear gramicidin, peptide antibiotic, membrane ion channel, dpc micelles
- 1ns5.pdb.
structural genomics, unknown function 27-jan-03 1ns5
Se
Title: x-ray structure of ybea from e.coli. northeast structural genomics research consortium (nesg) target er45
Author: j. benach, j. shen, b. rost, r. xiao, t. acton, g. montelione, j. f. hunt
- 1nth.pdb.
transferase 30-jan-03 1nth
Title: crystal structure of the methanosarcina barkeri monomethylamine methyltransferase (mtmb)
Author: b. hao, w. gong, t. k. ferguson, c. m. james, j. a. krzycki, m. k. chan
- 1o6x.pdb.
hydrolase 17-oct-02 1o6x
(NMR, 20 structures)
Title: nmr solution structure of the activation domain of human procarboxypeptidase a2
Author: m. a. jimenez, v. villegas, j. santoro, l. serrano, j. vendrell, f. x. aviles, m. rico
Keywords: hydrolase, carboxypeptidase, metalloproteas
- 1o6y.pdb.
transferase 21-oct-02 1o6y
Mg
Title: catalytic domain of pknb kinase from mycobacterium tuberculosis
Author: m. ortiz-lombardia, f. pompeo, b. boitel, p. m. alzari
Keywords: transferase,
- 1o88.pdb.
hydrolase 26-nov-02 1o88
Ca
Title: pectate lyase c from erwinia chrysanthemi at ph 11.2 with 30mm ca2+
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix, lyase
- 1o8d.pdb.
hydrolase 27-nov-02 1o8d
Ca
Title: pectate lyase c from erwinia chrysanthemi at ph 11.2 with 5mm ca2+
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix
- 1o8e.pdb.
hydrolase 27-nov-02 1o8e
Ca
Title: pectate lyase c from erwinia chrysanthemi at ph 11.2 with 1mm ca2+
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix
- 1o8f.pdb.
hydrolase 27-nov-02 1o8f
Ca
Title: pectate lyase c from erwinia chrysanthemi at ph 9.5 with 30mm ca2+
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix
- 1o8g.pdb.
hydrolase 27-nov-02 1o8g
Ca
Title: pectate lyase c from erwinia chrysanthemi at ph 9.5 with 5mm ca2+
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix, lyase
- 1o8h.pdb.
hydrolase 27-nov-02 1o8h
Ca
Title: pectate lyase c from erwinia chrysanthemi at ph 9.5 with 0.3mm ca2+ added
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix, lyase
- 1o8i.pdb.
hydrolase 27-nov-02 1o8i
Title: pectate lyase c from erwinia chrysanthemi at ph 9.5 with no ca2+ added
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix, lyase
- 1o8j.pdb.
hydrolase 27-nov-02 1o8j
Ca
Title: pectate lyase c from erwinia chrysanthemi at ph 4.5 with 30mm ca2+
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix
- 1o8k.pdb.
hydrolase 27-nov-02 1o8k
Ca
Title: pectate lyase c from erwinia chrysanthemi at ph 4.5 with 20mm ca2+
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix
- 1o8l.pdb.
hydrolase 27-nov-02 1o8l
Ca
Title: pectate lyase c from erwinia chrysanthemi at ph 4.5 with 5mm ca2+
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix, lyase
- 1o8m.pdb.
hydrolase 27-nov-02 1o8m
Title: pectate lyase c from erwinia chrysanthemi at ph 4.5 with no ca2+ added
Author: s. r. herron, f. a. jurnak
Keywords: calcium binding, parallel beta-helix, lyase
- 1o9b.pdb.
oxidoreductase 12-dec-02 1o9b
Se
Title: quinate/shikimate dehydrogenase ydib complexed with nadh
Author: g. michel, m. cygler
Keywords: quinate, shikimate, nad
- 1oad.pdb.
isomerase 08-jan-03 1oad
Mg Mn
Title: glucose isomerase from streptomyces rubiginosus in p21212 crystal form
Author: u. a. ramagopal, m. dauter, z. dauter
Keywords: glucose isomerase, xylose isomerase
- 1ob0.pdb.
hydrolase 21-jan-03 1ob0
Na Ca
Title: kinetic stabilization of bacillus licheniformis-amylase through introduction of hydrophobic residues at the surface
Author: m. machius, n. declerck, r. huber, g. wiegand
Keywords: glycosyltransferase, alpha-amylase, starch degradation, alpha-1, 4-glucan-4-glucanohydrolase, thermostability, calcium, sodium
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Metalloprotein Structure and Design project home page:
www.scripps.edu/research/metallo
Computational Center for Macromolecular Structure home page:
www.sdsc.edu/CCMS