Recent PDB releases or updates: week of 26 July 2002

• 1ab7.pdb. ribonuclease inhibitor 04-feb-97 1ab7 (NMR, 30 structures)
  Title: nmr 15n relaxation and structural studies reveal conformational exchange in barstar c40/82a, 30 structures
  Author: k. b. wong, a. r. fersht, s. m. v. freund
  
  
• 1cix.pdb. antimicrobial peptide 06-apr-99 1cix (NMR, 24 structures)
  Title: three-dimensional structure of antimicrobial peptide tachystatin a isolated from horseshoe crab
  Author: n. fujitani, s. kawabata, t. osaki, y. kumaki, m. demura, k. nitta, k. kawano
  Keywords: chitin-binding peptide
  
• 1d5g.pdb. hydrolase 07-oct-99 1d5g (NMR, 20 structures)
  Title: solution structure of the pdz2 domain from human phosphatase hptp1e complexed with a peptide
  Author: g. kozlov, k. gehring, i. ekiel
  
  
• 1e9m.pdb. iron-sulfur protein 24-oct-00 1e9m Fe
  Title: ferredoxin vi from rhodobacter capsulatus
  Author: g. sainz, j. armengaud, v. stojanoff, n. sanishvili, y. jouanneau, s. larry
  Keywords: [2fe-2s], bacterium, electron transport
  
• 1faz.pdb. hydrolase 14-jul-00 1faz
  Title: the crystal structure of prokaryotic phospholipase a2
  Author: y. matoba, y. katsube, m. sugiyama
  Keywords: prokaryote, streptomyces violaceoruber
  
• 1gvk.pdb. hydrolase 14-feb-02 1gvk Ca
  Title: porcine pancreatic elastase acyl enzyme at 0.95 a resolution
  Author: g. katona, r. c. wilmouth, p. a. wright, g. i. berglund, j. hajdu, r. neutze, c. j. schofield
  Keywords: serine protease, catalytic intermediate, atomic resolution
  
• 1gzh.pdb. gene regulation 22-may-02 1gzh Zn
  Title: crystal structure of the brct domains of human 53bp1 bound to the p53 tumor supressor
  Author: d. j. derbyshire, a. j. doherty
  Keywords: dna-binding, transcription regulation, bcrt domain, repeat, apoptosis, disease mutation, activator, dna-repair
  
• 1hch.pdb. oxidoreductase 04-may-01 1hch Fe Ca
  Title: horseradish peroxidase compound i
  Author: g. i. berglund, g. h. carlsson, j. hajdu, a. t. smith, h. szoke, a. henriksen
  Keywords: peroxidase, horseradish, catalytic intermediate, compound i
  
• 1ho9.pdb. membrane protein 10-dec-00 1ho9 (NMR, 20 structures)
  Title: best 20 nmr conformers of d130i mutant t3-i2, a 32 residue peptide from the alpha 2a adrenergic receptor
  Author: d. a. chung, e. r. zuiderweg, r. r. neubig
  
  
• 1hod.pdb. membrane protein 10-dec-00 1hod (NMR)
  Title: nmr structure of d130i mutant t3-i2, a 32 residue peptide from the alpha 2a adrenergic receptor
  Author: d. a. chung, e. r. zuiderweg, r. r. neubig
  
  
• 1hof.pdb. membrane protein 10-dec-00 1hof (NMR, 20 structures)
  Title: nmr structure of t3-i2, a 32 residue peptide from the alpha- 2a adrenergic receptor
  Author: d. a. chung, e. r. zuiderweg, r. r. neubig
  
  
• 1hto.pdb. ligase 01-jan-01 1hto Mn
  Title: crystallographic structure of a relaxed glutamine synthetase from mycobacterium tuberculosis
  Author: h. s. gill, d. eisenberg
  Keywords: mycobacterium tuberculosis, citrate
  
• 1htq.pdb. ligase 01-jan-01 1htq Mn
  Title: multicopy crystallographic structure of a relaxed glutamine synthetase from mycobacterium tuberculosis
  Author: h. s. gill, g. m. u. pfluegl, d. eisenberg
  Keywords: mycobacterium tuberculosis, multicopy refinement
  
• 1hy7.pdb. hydrolase 18-jan-01 1hy7 Zn Ca
  Title: a carboxylic acid based inhibitor in complex with mmp3
  Author: m. g. natchus, r. g. bookland, m. j. laufersweiler, s. pikul, n. g. almstead, b. de, m. j. janusz, l. c. hsieh, f. gu, m. e. pokross, v. s. patel, s. m. garver, s. x. peng, t. m. branch, s. l. king, t. r. baker, d. j. foltz, g. e. mieling
  Keywords: zinc protease, inhibited
  
• 1ifw.pdb. rna binding protein 13-apr-01 1ifw (NMR, 30 structures)
  Title: solution structure of c-terminal domain of poly(a) binding protein from saccharomyces cerevisiae
  Author: g. kozlov, n. siddiqui, s. coillet-matillon, t. sprules, i. ekiel, k. gehring
  
  
• 1iox.pdb. hormone/growth factor 18-apr-01 1iox (NMR, 40 structures)
  Title: nmr structure of human betacellulin-2
  Author: k. miura, h. doura, t. aizawa, h. tada, m. seno, h. yamada, k. kawano
  
  
• 1iqo.pdb. metal binding protein 23-jul-01 1iqo (NMR, 20 structures)
  Title: solution structure of mth1880 from methanobacterium thermoautotrophicum
  Author: c. h. lee, j. shin, e. bang, j. w. jung, a. yee, c. h. arrowsmith, w. lee
  Keywords: anti-parallel, calcium binding, structural genomics
  
• 1j5v.pdb. transferase 05-jul-02 1j5v Zn Fe Ni Se
  Title: crystal structure of 2-keto-3-deoxygluconate kinase (tm0067) from thermotoga maritima at 2.3 a resolution
  Author: joint center for structural genomics
  Keywords: tm0067, 2-keto-3-deoxygluconate kinase, jcsg
  
• 1jcu.pdb. structural genomics 11-jun-01 1jcu (NMR, 20 structures)
  Title: solution structure of mth1692 protein from methanobacterium thermoautotrophicum
  Author: g. kozlov, i. ekiel, k. gehring
  Keywords: structural genomics
  
• 1jwx.pdb. transferase 05-sep-01 1jwx
  Title: chalcone synthase--f215s mutant
  Author: j. m. jez, m. e. bowman, j. p. noel
  Keywords: altered substrate specificity, ketoacyl synthase
  
• 1jx0.pdb. isomerase 05-sep-01 1jx0
  Title: chalcone isomerase--y106f mutant
  Author: j. m. jez, m. e. bowman, j. p. noel
  Keywords: unique fold
  
• 1jx1.pdb. isomerase 05-sep-01 1jx1
  Title: chalcone isomerase--t48a mutant
  Author: j. m. jez, m. e. bowman, j. p. noel
  Keywords: unique fold
  
• 1k0x.pdb. hormone/growth factor 21-sep-01 1k0x (NMR, 20 structures)
  Title: solution structure of melanoma inhibitory activity protein
  Author: j. c. lougheed, p. j. domaille, t. m. handel
  
  
• 1k8a.pdb. ribosome 23-oct-01 1k8a Cl Mg K Na Cd
  Title: co-crystal structure of carbomycin a bound to the 50s ribosomal subunit of haloarcula marismortui
  Author: j. l. hansen, j. a. ippolito, n. ban, p. nissen, p. b. moore, t. steitz
  Keywords: carbomycin a, macrolide
  
• 1k9m.pdb. ribosome 29-oct-01 1k9m Cl Mg K Na Cd
  Title: co-crystal structure of tylosin bound to the 50s ribosomal subunit of haloarcula marismortui
  Author: j. l. hansen, j. a. ippolito, n. ban, p. nissen, p. b. moore, t. a. steitz
  Keywords: tylosin, antibiotic
  
• 1kc5.pdb. immune system 07-nov-01 1kc5
  Title: crystal structure of antibody pc287 in complex with ps1 peptide
  Author: d. t. nair, k. singh, z. siddiqui, b. p. nayak, k. v. rao, d. m. salunke
  Keywords: peptide antigen, complex (antibody/peptide)
  
• 1kd1.pdb. ribosome 12-nov-01 1kd1 Cl Mg K Na Cd
  Title: co-crystal structure of spiramycin bound to the 50s ribosomal subunit of haloarcula marismortui
  Author: j. l. hansen, j. a. ippolito, n. ban, p. nissen, p. b. moore, t. a. steitz
  Keywords: spiramycin, antibiotic, macrolide, carbinolamine
  
• 1kf0.pdb. transferase 19-nov-01 1kf0 Mg
  Title: crystal structure of pig muscle phosphoglycerate kinase ternary complex with amp-pcp and 3pg
  Author: z. kovari, b. flachner, g. naray-szabo, m. vas
  
  
• 1kll.pdb. antimicrobial protein 12-dec-01 1kll Se
  Title: molecular basis of mitomycin c resictance in streptomyces: crystal structures of the mrd protein with and without a drug derivative
  Author: t. w. martin, z. dauter, y. devedjiev, p. sheffield, f. jelen, m. he, d. sherman, j. otlewski, z. s. derewenda, u. derewenda
  Keywords: antibiotic resistance, sad, anomalous diffraction, crystal structure, domain swapping, p-staking
  
• 1kmi.pdb. signaling protein 16-dec-01 1kmi Mg F Be
  Title: crystal structure of an e.coli chemotaxis protein, chez
  Author: r. zhao, e. j. collins, r. b. bourret, r. e. silversmith
  
  
• 1kmx.pdb. hormone/growth factor 17-dec-01 1kmx (NMR, 20 structures)
  Title: heparin-binding domain from vascular endothelial growth factor
  Author: m. e. stauffer, n. j. skelton, w. j. fairbrother
  Keywords: angiogenesis, growth factor
  
• 1kmz.pdb. antimicrobial protein 17-dec-01 1kmz
  Title: molecular basis of mitomycin c resictance in streptomyces: crystal structures of the mrd protein with and without a drug derivative
  Author: t. w. martin, z. dauter, y. devedjiev, p. sheffield, f. jelen, m. he, d. sherman, j. otlewski, z. s. derewenda, u. derewenda
  Keywords: antibiotic resistance, sad, anomalous diffraction, crystal structure, domain swapping, p-staking
  
• 1kq3.pdb. structural genomics, unknown function 03-jan-02 1kq3 Cl Zn
  Title: crystal structure of glycerol dehydrogenase (tm0423) from thermotoga maritima at 1.5 a resolution
  Author: i. wilson, m. miller
  Keywords: glycerol dehydrogenase, structural genomics, jcsg
  
• 1kq4.pdb. structural genomics, unknown function 03-jan-02 1kq4 Se
  Title: crystal structure of thy1-complementing protein (tm0449) from thermotoga maritima at 2.25 a resolution
  Author: i. wilson, m. miller
  Keywords: flavin- adenine dinucleotide, structural genomics, jcsg
  
• 1krk.pdb. signaling protein 09-jan-02 1krk (NMR, 20 structures)
  Title: solution structure of ss-cyclized catestatin fragment from chromogranin a
  Author: n. e. preece, m. nguyen, m. mahata, s. k. mahata, i. tsigelny, d. t. o'connor
  
  
• 1kyv.pdb. transferase 06-feb-02 1kyv
  Title: lumazine synthase from s.pombe bound to riboflavin
  Author: s. gerhardt, i. haase, s. steinbacher, j. t. kaiser, m. cushman, a. bacher, r. huber, m. fischer
  Keywords: lumazine synthase, crystal structure, schizosaccharomyces pombe, ligand binding
  
• 1kyx.pdb. transferase 06-feb-02 1kyx
  Title: lumazine synthase from s.pombe bound to carboxyethyllumazine
  Author: s. gerhardt, i. haase, s. steinbacher, j. t. kaiser, m. cushman, a. bacher, r. huber, m. fischer
  Keywords: lumazine synthase, crystal structure, schizosaccharomyces pombe, ligand binding
  
• 1kyy.pdb. transferase 06-feb-02 1kyy
  Title: lumazine synthase from s.pombe bound to nitropyrimidinedione
  Author: s. gerhardt, i. haase, s. steinbacher, j. t. kaiser, m. cushman, a. bacher, r. huber, m. fischer
  Keywords: lumazine synthase, crystal structure, schizosaccharomyces pombe, ligand binding
  
• 1kz1.pdb. transferase 06-feb-02 1kz1
  Title: mutant enzyme w27g lumazine synthase from s.pombe
  Author: s. gerhardt, i. haase, s. steinbacher, j. t. kaiser, m. cushman, a. bacher, r. huber, m. fischer
  Keywords: lumazine synthase, crystal structure, schizosaccharomyces pombe, ligand binding
  
• 1kz4.pdb. transferase 06-feb-02 1kz4
  Title: mutant enzyme w63y lumazine synthase from s.pombe
  Author: s. gerhardt, i. haase, s. steinbacher, j. t. kaiser, m. cushman, a. bacher, r. huber, m. fischer
  Keywords: lumazine synthase, crystal structure, schizosaccharomyces pombe, ligand binding
  
• 1kz6.pdb. transferase 06-feb-02 1kz6
  Title: mutant enzyme w63y/l119f lumazine synthase from s.pombe
  Author: s. gerhardt, i. haase, s. steinbacher, j. t. kaiser, m. cushman, a. bacher, r. huber, m. fischer
  Keywords: lumazine synthase, crystal structure, schizosaccharomyces pombe, ligand binding
  
• 1kz9.pdb. transferase 06-feb-02 1kz9
  Title: mutant enzyme l119f lumazine synthase from s.pombe
  Author: s. gerhardt, i. haase, s. steinbacher, j. t. kaiser, m. cushman, a. bacher, r. huber, m. fischer
  Keywords: lumazine synthase, crystal structure, schizosaccharomyces pombe, ligand binding
  
• 1l2t.pdb. transport protein 24-feb-02 1l2t Na
  Title: dimeric structure of mj0796, a bacterial abc transporter cassette
  Author: p. c. smith, n. karpowich, j. rosen, j. f. hunt
  Keywords: atpase, walker-a, nbd
  
• 1l6t.pdb. hydrolase 13-mar-02 1l6t (NMR, 10 structures)
  Title: structure of ala24/asp61 to asp24/asn61 substituted subunit c of escherichia coli atp synthase
  Author: o. y. dmitriev, f. abildgaard, j. l. markley, r. h. fillingame
  
  
• 1l8a.pdb. oxidoreductase 19-mar-02 1l8a Mg
  Title: e. coli pyruvate dehydrogenase
  Author: w. furey, p. arjunan
  Keywords: pyruvate, alpha-keto acid dehydrogenase
  
• 1l8j.pdb. blood clotting 20-mar-02 1l8j
  Title: crystal structure of the endothelial protein c receptor and bound phospholipid molecule
  Author: v. oganesyan, n. oganesyan, s. terzyan, q. dongfeng, z. dauter, n. l. esmon, c. t. esmon
  Keywords: glycosilation, mhc class1, hydrophobic groove
  
• 1lfm.pdb. electron transport 11-apr-02 1lfm Co
  Title: crystal structure of cobalt(iii)-substituted cytochrome c (tuna)
  Author: f. a. tezcan, w. m. findley, b. r. crane, s. a. ross, j. g. lyubovitsky, h. b. gray, j. r. winkler
  Keywords: folding, intermediates
  
• 1lg5.pdb. lyase 15-apr-02 1lg5 Zn
  Title: crystal structure analysis of the hca ii mutant t199p in complex with beta-mercaptoethanol
  Author: s. huang, b. sjoblom, a. e. sauer-eriksson, b. -h. jonsson
  
  
• 1lg6.pdb. lyase 15-apr-02 1lg6 Zn
  Title: crystal structure analysis of hca ii mutant t199p in complex with thiocyanate
  Author: s. huang, b. sjoblom, a. e. sauer-eriksson, b. -h. jonsson
  
  
• 1lgd.pdb. lyase 15-apr-02 1lgd Zn
  Title: crystal structure analysis of hca ii mutant t199p in complex with bicarbonate
  Author: s. huang, b. sjoblom, a. e. sauer-eriksson, b. -h. jonsson
  
  
• 1lqf.pdb. hydrolase 10-may-02 1lqf F
  Title: structure of ptp1b in complex with a peptidic bisphosphonate inhibitor
  Author: e. asante-appiah, s. patel, c. dufresne, g. scapin
  Keywords: phosphonates, diabetes, inhibitor
  
• 1lqv.pdb. blood clotting 13-may-02 1lqv Ca
  Title: crystal structure of the endothelial protein c receptor with phospholipid in the groove in complex with gla domain of protein c.
  Author: v. oganesyan, n. oganesyan, s. terzyan, q. dongfeng, z. dauter, n. l. esmon, c. t. esmon
  Keywords: phospholipid binding groove, ca ion binding
  
• 1lqw.pdb. hydrolase 14-may-02 1lqw Zn
  Title: crystal structure of s.aureus peptide deformylase
  Author: v. mikol
  Keywords: peptide deformylase
  
• 1lqy.pdb. hydrolase 14-may-02 1lqy Ni
  Title: crystal structure of bacillus stearothermophilus peptide deformylase complexed with antibiotic actinonin
  Author: m. mathieu, v. mikol
  Keywords: inhibition, polypeptide deformylase
  
• 1lru.pdb. hydrolase 16-may-02 1lru Zn
  Title: crystal structure of e.coli peptide deformylase complexed with antibiotic actinonin
  Author: j. -p. guilloteau, m. mathieu, c. giglione, v. blanc, a. dupuy, m. chevrier, p. gil, a. famechon, t. meinnel, v. mikol
  Keywords: inhibition, polypeptide deformylase
  
• 1lry.pdb. hydrolase 16-may-02 1lry Zn
  Title: crystal structure of p. aeruginosa peptide deformylase complexed with antibiotic actinonin
  Author: j. -p. guilloteau, m. mathieu, c. giglione, v. blanc, a. dupuy, m. chevrier, p. gil, a. famechon, t. meinnel, v. mikol
  Keywords: inhibition, polypeptide deformylase
  
• 1lvs.pdb. deoxyribonucleic acid 29-may-02 1lvs (NMR, 10 structures)
  Title: the solution structure of d(g4t4g3)2
  Author: m. crnugelj, n. v. hud, j. plavec
  Keywords: nmr, cation coordination, telomeric repeat
  
• 1m0v.pdb. hydrolase 14-jun-02 1m0v (NMR, 20 structures)
  Title: nmr structure of the type iii secretory domain of yersinia yoph complexed with the skap-hom phospho-peptide n-acetyl- depyddpf-nh2
  Author: p. khandelwal, k. keliikuli, c. l. smith, m. a. saper, e. r. p. zuiderweg
  
  
• 1m1k.pdb. ribosome 19-jun-02 1m1k Cl Mg K Na Cd
  Title: co-crystal structure of azithromycin bound to the 50s ribosomal subunit of haloarcula marismortui
  Author: j. l. hansen, j. a. ippolito, n. ban, p. nissen, p. b. moore, t. a. steitz
  Keywords: ribosome, azithromycin, macrolide, haloarcula
  
• 1m43.pdb. hydrolase 02-jul-02 1m43
  Title: crystal structure of pmii in complex with pepstatin a to 2.4 a
  Author: o. a. asojo, a. m. silva, s. gulnik
  
  
• 1m62.pdb. chaperone 11-jul-02 1m62 (NMR, 25 structures)
  Title: solution structure of the bag domain from bag4/sodd
  Author: k. briknarova, s. takayama, s. homma, k. baker, e. cabezas, d. w. hoyt, z. li, a. c. satterthwait, k. r. ely
  Keywords: bag4, sodd, silencer of death domains, hsp70/hsc70 co-chaperone
  
• 43c9.pdb. immunoglobulin 10-mar-99 43c9
  Title: crystallographic structure of the esterolytic and amidolytic 43c9 antibody
  Author: m. m. thayer, e. d. getzoff, v. a. roberts
  
  
• 43ca.pdb. immunoglobulin 10-mar-99 43ca
  Title: crystallographic structure of the esterolytic and amidolytic 43c9 antibody with bound p-nitrophenol
  Author: m. m. thayer, e. d. getzoff, v. a. roberts
  Keywords: catalytic antibody