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Last modified: 25 November 1998


Cytochrome c554

Haem Haem type Haem iron coordination Axial iron ligands Formal iron oxidation/spin states
1
Haem c image
Haem c
His-Haem-His(Ndelta) image
Hexacoordinate
NepsilonHis;

NdeltaHis

FeII (S=0);

FeIII (S=1/2)

2
Haem-His image
Pentacoordinate
NepsilonHis
FeII (S=2);

FeIII (S=5/2)

3

4

His-Haem-His image
Hexacoordinate
NepsilonHis;

NepsilonHis

FeII (S=0);

FeIII (S=1/2)

Tetrahaem cytochrome c554 (cyt c554) is involved in the oxidation of ammonia to nitrite in a nitrifying chemoautotrophic bacterium Nitrosomonas europaea as the mobile electron carrier between hydroxylamine oxidoreductase (HAO; EC 1.7.3.4) and monohaem cytochrome c552 (cyt c552) [1] (1). Alternative schemes include the direct electron transfer from cyt c554 to a membrane­bound terminal oxidase [2] (2):

Cyt c554 contains four covalently bound haem groups, designated 1 to 4 according to the position of the haem binding motif CxxCH in the sequence. The reduction potentials of the four haems at pH 7.0 have been determined [3] (see table below). Spectroscopic changes indicate that the two electrons from HAO are taken up by a high­potential (Em = +47 mV) haem pair (one high­spin and one low­spin) [4].

The 3­D structure of cyt c554 has been determined [1]. It consists mainly of alpha­helices, with two stretches of 310­helix and two short parallel ß­strands. Haems 1 and 2 are located at the opposite ends of cyt c554, while haems 3 and 4 are located in the middle of the molecule. The four haems are arranged as two haem pairs, (1,3) and (2,4). Within each pair, the haem planes are roughly parallel to each other and the pairs are arranged roughly perpendicular to each other. Haems 1, 3 and 4 are bis­His coordinated, low­spin haems; haem 2 is pentacoordinate, high­spin haem. Cyt c554 is unique among other haem proteins in coordination of haem 1: the iron sixth ligand is the Ndelta of the distal histidine (His­102).

Interestingly, the four haems of cyt c554 may be structurally aligned with haems 3-6 of HAO and are connected to the protein in the same order, although there are no significant sequence and structure similarity between cyt c554 and HAO. Haem 2 corresponds to the pentacoordinate haem P460 which forms the active site of HAO [1]. Some properties of the cyt c554 haems are summarised in the table:

Haem Crystallography [1] Spectroscopy / electrochemistry ¹
Haem iron ligands Covalent links Spin Absorption spectral features (nm) [3] Em (mV)
[3] ³
Proximal Distal Soret ² alpha
2 His­64
-
Cys­60; Cys­63 high 424; 432 554 +47 (+50)
1 His­13 His­102 Cys­11; Cys­14 low 424; 432 554 +47 (+50)
3 His­92 His­179 Cys­88; Cys­91 low 414; 424 554 -147 (-120)
4 His­138 His­27 Cys­134; Cys­137 low 418; 432 554 -276 (-225)

¹ Note that there are no assignment between `crystallographic' and `spectroscopic' parts of the table, especially as concerns haems 1, 3 and 4. It is likely that haem 2 corresponds to +47 mV haem.
² The Soret bands are split.
³ Spectroelectrochemical measurements; figures in brackets are from the voltammetry measurements [
3].

Cyt c554 in SWISS­PROT/TREMBL

C554_NITEU Cytochrome c554 precursor (hydroxylamine oxidoreductase­linked cytochrome); Nitrosomonas europaea

References

  1. Iverson, T.M., Arciero, D.M., Hsu, B.T., Logan, M.S.P., Hooper, A.B. and Rees, D.C. (1998) Heme packing motifs revealed by the crystal structure of the tetra­heme cytochrome c554 from Nitrosomonas europaea. Nature Struct. Biol. 5, 1005-1012.
  2. Prince, R.C. and George, G.N. (1997) The remarkable complexity of hydroxylamine oxidoreductase. Nature Struct. Biol. 4, 247-250.
  3. Arciero, D.M., Collins, M.J., Haladjian, J., Bianco, P. and Hooper, A.B. (1991a) Resolution of the four hemes of cytochrome c554 from Nitrosomonas europaea by redox potentiometry and optical spectroscopy. Biochemistry 30, 11459-11465.
  4. Arciero, D.M., Balny, C. and Hooper, A.B. (1991b) Spectroscopic and rapid kinetic studies of reduction of cytochrome c554 by hydroxylamine oxidoreductase from Nitrosomonas europaea. Biochemistry 37, 11466-11472.
Bibliography on structural studies of cytochrome c554