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Last modified: 15 August 1997


Light­harvesting complex II (Rhodopseudomonas acidophila) structure [1]

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a = 78 K; b = 306 K; c = 16 K.

PDB scop BSM RELI
Base
Header MMS Abstract ¹
1kzu 1kzu 1kzu 1kzu Light­harvesting complex II (B800­850); Rhodopseudomonas acidophila strain 10050 MS6PT1
1LGH nonamer image a
a
1KZU nonamer image b
b
1KZU BChl ligation image
c

¹ Macromolecular Structures abstract. Full text is available to BioMedNet Members

  1. The arrangement of prosthetic groups of the light­harvesting complex II (LH­II) proteins from Rhodopseudomonas acidophila (PDB code 1KZU). The biologically active LH­II is a nonamer of alphaß heterodimers. 1KZU contains one­third of the asymmetric unit (dimers AB, DE and GH). Each dimer binds three bacteriochlorophyll a (BChl­a) molecules and two carotenoid molecules. Two BChl­a molecules with absorption maximum at 850 nm (B850) are perpendicular to the membrane plane and sandwiched between alpha and ß subunits; one of these molecules is bound to the alpha subunit (B850alpha) and the other is bound to the ß subunit (B850ß). One BChl­a molecule with absorption maximum at 800 nm (B800) is bound to the alpha subunit and is oriented parallel to the membrane. Colour­codes: B850alpha = deep red; B850ß = deep purple; B800 = dark green; carotenoid (rhodopin glucoside) = brown. The phytyl chains of BChl­a are not shown.
  2. As b, carotenoids are not shown; the transmembrane helices of alpha and ß subunits are shown (alpha subunits form the inner circle and ß subunits form the outer one).
  3. The axial ligation of BChl­a in AB dimers. Orientation and colour­codes of BChl­a as a.
All drawings were produced by using the program MOLSCRIPT [2].

References

  1. McDermott, G., Prince, S.M., Freer, A.A., Hawthornthwaite­Lawless, A.M., Papiz, M.Z., Cogdell, R.J. and Isaacs, N.W. (1995) Crystal structure of an integral membrane light­harvesting complex from photosynthetic bacteria. Nature 374, 517-521.
  2. Kraulis, P.J. (1991) MOLSCRIPT: a program to produce both detailed and schematic plots of protein structure. J. Appl. Crystallogr. 24, 946-950.
Bibliography on structural studies of light­harvesting complex II of purple bacteria